Citrus Sinensis ID: 009407
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | 2.2.26 [Sep-21-2011] | |||||||
| Q0WM29 | 607 | Methylmalonate-semialdehy | yes | no | 0.988 | 0.871 | 0.823 | 0.0 | |
| P52713 | 523 | Probable methylmalonate-s | yes | no | 0.949 | 0.971 | 0.603 | 0.0 | |
| Q02253 | 535 | Methylmalonate-semialdehy | yes | no | 0.923 | 0.923 | 0.606 | 0.0 | |
| Q07536 | 537 | Methylmalonate-semialdehy | yes | no | 0.923 | 0.919 | 0.602 | 0.0 | |
| Q9EQ20 | 535 | Methylmalonate-semialdehy | yes | no | 0.923 | 0.923 | 0.602 | 0.0 | |
| Q54I10 | 528 | Probable methylmalonate-s | yes | no | 0.910 | 0.922 | 0.620 | 0.0 | |
| Q02252 | 535 | Methylmalonate-semialdehy | yes | no | 0.923 | 0.923 | 0.597 | 0.0 | |
| Q17M80 | 521 | Probable methylmalonate-s | N/A | no | 0.923 | 0.948 | 0.612 | 0.0 | |
| Q7QC84 | 521 | Probable methylmalonate-s | yes | no | 0.923 | 0.948 | 0.602 | 0.0 | |
| Q7KW39 | 520 | Probable methylmalonate-s | yes | no | 0.923 | 0.95 | 0.624 | 1e-180 |
| >sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/539 (82%), Positives = 496/539 (92%), Gaps = 10/539 (1%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSE 56
ML R++ NL+ +RPQ A ST + ++ PPRVPNLIGG+F+ES+SS
Sbjct: 74 MLLRISG----NNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSS 129
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116
+IDVINPATQEVVS++PLTTNEEFKAAVSAAKQAFP WRNTPITTRQRVMLK QELIR++
Sbjct: 130 FIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN 189
Query: 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
+DKLAMNITTEQGKTLKD+ GD+FRGLEVVEH+CGMATLQMGEY+PNVSNG+DTYS+REP
Sbjct: 190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREP 249
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKPSEKDPGAS++LAELAMEAGLPDGVL
Sbjct: 250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVL 309
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
NIVHGT+DTVNAICDD +IRA+SFVGSN AGMHIYARA+AKGKR+QSNMGAKNHG+VLPD
Sbjct: 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 369
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356
AN+DATLNAL AAGFGAAGQRCMALSTVVFVGD+KSWEDKLVERAKALKV G+E DADL
Sbjct: 370 ANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADL 429
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
GPVISKQAKERICRLIQSG++ GA+LLLDGR+IVVPGYE GNFIGPTIL+ VT DMECYK
Sbjct: 430 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYK 489
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476
EEIFGPVL+CMQA+S +EAI I+NKN+YGNGAAIFTSSGAAARKFQ +IEAGQ+GINVPI
Sbjct: 490 EEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI 549
Query: 477 PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
PVPLPFFSFTG+KASFAGDLNFYGKAGV+F+TQIKTVTQQW+D+P + VSLAMPTSQK
Sbjct: 550 PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIP--TSVSLAMPTSQK 606
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 7 |
| >sp|P52713|MMSA_CAEEL Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Caenorhabditis elegans GN=alh-8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/519 (60%), Positives = 396/519 (76%), Gaps = 11/519 (2%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDV 60
ML+RLA +Q + Q A FST + P V I G +ES++++++++
Sbjct: 1 MLSRLARVQP-------KCQQLAHFSTSKSAAAA----PTVKLWIDGQAVESKTTDFVEL 49
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
NPAT EV++ +P T E +AAV +AK AF +W+NT TRQ+ M KLQ LI+RD+ KL
Sbjct: 50 TNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPLTRQQCMFKLQALIKRDMKKL 109
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A +IT EQGKTL DA+GDV RGL+VVEH+C + +L MGE +PNVS +DT+S R PLGV
Sbjct: 110 AESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVT 169
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
AGICPFNFPAMIPLWMFPVA+ GNT V+KPSE+DPGA+ +L ELA EAG+PDG +NI+H
Sbjct: 170 AGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLVELAKEAGVPDGCVNIIH 229
Query: 241 GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMD 300
G H VN ICD+ +I+AISFVG + AG HIY R + GKRVQSNMGAKNHG+++ DAN +
Sbjct: 230 GQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKRVQSNMGAKNHGVIMADANKE 289
Query: 301 ATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVI 360
TLN L AA FGAAGQRCMAL+T V VG++++W +LVE+AK LKVNAG + D D+GP+I
Sbjct: 290 QTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEKAKNLKVNAGWKPDTDIGPLI 349
Query: 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIF 420
SKQ+K R+ RLI+S + GA++ LDG NI VPG+E+GNF+GPTIL V +M CY+EEIF
Sbjct: 350 SKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFVGPTILAGVKPNMTCYREEIF 409
Query: 421 GPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPL 480
GPVL+ M+A++L EAI+I+N N YGNG AIFTS+GA ARKF E++ GQ+GINVPIPVPL
Sbjct: 410 GPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKFTNEVDVGQIGINVPIPVPL 469
Query: 481 PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
P FSFTGS+ SF GDLNFYGKAG+ FYTQ KTVTQ W +
Sbjct: 470 PMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNE 508
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Caenorhabditis elegans (taxid: 6239) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02253|MMSA_RAT Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/495 (60%), Positives = 391/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V I G F+ES+S ++ID+ NPAT EVV ++P +T E +AAV+A K+AFP+W +T
Sbjct: 38 PTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMEAAVAACKRAFPAWADTS 97
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+V+L+ Q+LI+ ++ ++A IT EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 98 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 157
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG H+ VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRNG 277
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+PDAN + TLN L A FGAAGQRCMALST V VG++K W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERAK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR I V GYE+GN
Sbjct: 338 ERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEGASILLDGRKIKVKGYENGN 397
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V M CYKEEIFGPVL+ ++ ++L+EAIKIVN N YGNG AIFT++GA A
Sbjct: 398 FVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGAIA 457
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 458 RKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 518 EEDATLSSPAVVMPT 532
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q07536|MMSA_BOVIN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/495 (60%), Positives = 390/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V I G FIES+S ++ID+ NPAT EV+ ++P +T E AAVS+ K+ FP+W +T
Sbjct: 40 PTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAEMDAAVSSCKRTFPAWADTS 99
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+V+L+ Q+LI+ ++ ++A I EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 100 ILSRQQVLLRYQQLIKENLKEIARLIMLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 159
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
+ +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 160 DTMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 219
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG H+ VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 220 TMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHG 279
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+PDAN + TLN L A FGAAGQRCMALST + VG++K W +LV
Sbjct: 280 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELV 339
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERAK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR+I V GYE+GN
Sbjct: 340 ERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRSIKVKGYENGN 399
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V +M CYKEEIFGPVL+ ++ D+L+EAIKIVN N YGNG AIFT++GA A
Sbjct: 400 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATA 459
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS+ASF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 460 RKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWK 519
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 520 EEDASLSSPAVVMPT 534
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q9EQ20|MMSA_MOUSE Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Mus musculus GN=Aldh6a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/495 (60%), Positives = 389/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V I G F+ES+S ++ID+ NPAT EVV ++P +T E AAV + K+AFP+W +T
Sbjct: 38 PTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMDAAVESCKRAFPAWADTS 97
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+V+L+ Q+LI+ ++ ++A IT EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 98 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 157
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG HD VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHDAVNFICDHPDIKAISFVGSNQAGEYIFERGSRNG 277
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+PDAN + TLN L A FGAAGQRCMALST + VG++K W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELV 337
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
+RAK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR I V GYE+GN
Sbjct: 338 DRAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRRIKVKGYENGN 397
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V M CYKEEIFGPVL+ ++ ++L+EAIKIVN N YGNG AIFT++GA A
Sbjct: 398 FVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGATA 457
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 458 RKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 518 EEDATLSSPAVVMPT 532
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q54I10|MMSA_DICDI Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Dictyostelium discoideum GN=mmsdh PE=3 SV=1 | Back alignment and function description |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/488 (62%), Positives = 382/488 (78%), Gaps = 1/488 (0%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G F+ES++ E+++V NPATQE+V+++P++T EE +AAV AA AFP+WR+T ++ R
Sbjct: 33 FINGKFVESKTKEWLEVRNPATQELVTKVPVSTKEEMEAAVKAASDAFPAWRDTSVSNRS 92
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN 163
R++ + LI +++DK+A IT EQGKTL DA+GDVFRGLEVVEHS +A+L MGE V N
Sbjct: 93 RIISNYKNLINKNMDKIAAIITEEQGKTLPDAKGDVFRGLEVVEHSVNVASLMMGETVEN 152
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
VS +D YS +PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTFVLKPSE+ P AS+ L
Sbjct: 153 VSKNVDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSERVPSASMFLV 212
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS 283
+LA EAG+PDGV+N++HG + VN ICD +RAISFVG++ AG HI+AR +A GKRVQS
Sbjct: 213 QLAQEAGVPDGVVNVIHGGKEAVNFICDAPEVRAISFVGADQAGRHIHARGTANGKRVQS 272
Query: 284 NMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKA 343
NM AKNH ++PDA+ + TL+AL A FGA+GQRCMALS VFVG+SK+W +L ERAK
Sbjct: 273 NMAAKNHATIVPDAHKERTLDALTGAAFGASGQRCMALSAAVFVGESKNWIPELAERAKK 332
Query: 344 LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV-PGYEHGNFIGP 402
LKV G ADLGPVIS +K+RI LIQSGI+ GA+ +LDGRN+VV P + GNF+GP
Sbjct: 333 LKVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVVDPEFSKGNFVGP 392
Query: 403 TILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ 462
TILTDV M CYKEEIFGPVL+C+ D++++AI+++N N YGNG A+FTSSGA ARK+Q
Sbjct: 393 TILTDVKPHMRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQ 452
Query: 463 TEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPG 522
EI+ GQVGIN+PIPVPLPFFSFTGS+ SF G +FYGK GV F+TQIKT+T WRD
Sbjct: 453 REIDVGQVGINLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRDDDI 512
Query: 523 GSGVSLAM 530
GVS +M
Sbjct: 513 SHGVSSSM 520
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q02252|MMSA_HUMAN Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Homo sapiens GN=ALDH6A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 296/495 (59%), Positives = 390/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V IGG F+ES+S ++ID+ NPAT EV+ ++P T E AA+++ K+AFP+W +T
Sbjct: 38 PTVKLFIGGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTS 97
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
+ +RQ+V+L+ Q+LI+ ++ ++A IT EQGKTL DA+GDVFRGL+VVEH+C + +L MG
Sbjct: 98 VLSRQQVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMG 157
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG H+ VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHG 277
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+PDAN + TLN L A FGAAGQRCMALST V VG++K W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
E AK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR I V GYE+GN
Sbjct: 338 EHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGN 397
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V +M CYKEEIFGPVL+ ++ ++L+EAI+IVN N YGNG AIFT++GA A
Sbjct: 398 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATA 457
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 458 RKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 518 EEDATLSSPAVVMPT 532
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q17M80|MMSA_AEDAE Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Aedes aegypti GN=AAEL001134 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/495 (61%), Positives = 389/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P I G F++S+++E+ID+ +PAT +VV+++P T +E ++AV ++K+AF +W T
Sbjct: 25 PTTKMFIDGKFVDSKTTEWIDLHDPATNKVVTRVPKCTQDEMESAVESSKKAFKTWSQTS 84
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I RQ+VM KLQ LIR ++ +LA NIT EQGKTL DA+GDV RGL+VVEH C + +LQMG
Sbjct: 85 ILGRQQVMFKLQHLIRNNMSELAKNITKEQGKTLVDAEGDVLRGLQVVEHCCSITSLQMG 144
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E VPN++ +DTYS PLGV AGICPFNFPAMIPLWMFPVA+TCGNT ++KPSE+ PGA
Sbjct: 145 ETVPNIAKDMDTYSYTLPLGVTAGICPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGA 204
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++ML EL EAG P GV+N++HG HD VN ICD+ I+A+SFVGS+ AG +IY RA G
Sbjct: 205 TMMLMELLNEAGCPPGVVNVIHGAHDAVNFICDNPTIKAVSFVGSDQAGKYIYERAGRNG 264
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQSNMGAKNHG+++ DAN + TLN LA A FGAAGQRCMALST VFVG++K W LV
Sbjct: 265 KRVQSNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEAKQWIPDLV 324
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERA+ LKVNAG D+GPVIS Q+K+RI L++SG++ GA+L+LDGR+I V +E+GN
Sbjct: 325 ERARKLKVNAGHVPGTDVGPVISPQSKQRINELVESGVKEGAKLVLDGRSIKVENFENGN 384
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTILTDV+ +M+CY EEIFGPVL+C+ D+++EA++++N N YGNG AIFT++GA A
Sbjct: 385 FVGPTILTDVSTNMKCYTEEIFGPVLVCLTVDTVDEAVEMINNNPYGNGTAIFTTNGATA 444
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RKF EI+ GQVG+NVPIPVPLP FSFTGS+ SF GD +FYGK GV FYTQ KTVTQ WR
Sbjct: 445 RKFVNEIDVGQVGVNVPIPVPLPMFSFTGSRGSFMGDCHFYGKQGVKFYTQTKTVTQLWR 504
Query: 519 DLP-GGSGVSLAMPT 532
+ + ++AMPT
Sbjct: 505 EGDVSHTKAAVAMPT 519
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Aedes aegypti (taxid: 7159) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7QC84|MMSA_ANOGA Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Anopheles gambiae GN=AGAP002499 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/495 (60%), Positives = 390/495 (78%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P I G F+ES+++++ID+ +PAT EVV+++P T +E + AV ++K+A+ +WR +
Sbjct: 25 PTTKMFIDGKFVESKTNDWIDLHDPATNEVVTRVPKCTQDEMQTAVESSKKAYKTWRQSS 84
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+VMLKLQ +IR ++ +LA NIT EQGKTL DA+GDV RGL+VVEH C + +LQMG
Sbjct: 85 ILSRQQVMLKLQHIIRNNMSELAKNITKEQGKTLIDAEGDVLRGLQVVEHCCSITSLQMG 144
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E VPN++ +DTYS PLGV AGI PFNFPAMIPLWMFPVA+TCGNT ++KPSE+ PGA
Sbjct: 145 ETVPNIAKDMDTYSYHLPLGVTAGIAPFNFPAMIPLWMFPVAITCGNTSIIKPSERVPGA 204
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++L E+ EAG P GV+N++HG HD VN +CD+ +IRA+SFVGS+ AG +IY RA G
Sbjct: 205 TMLLMEMLNEAGCPPGVVNVIHGAHDAVNFVCDNPDIRAVSFVGSDQAGKYIYERAGRNG 264
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ NMGAKNHG+++ DAN + TLN LA A FGAAGQRCMALST VFVG++++W LV
Sbjct: 265 KRVQCNMGAKNHGVIMADANKENTLNQLAGAAFGAAGQRCMALSTAVFVGEARNWIPDLV 324
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERA+ LKVNAG DLGPVIS Q+K+RI L++SG + GA+++LDGRNI V G+E GN
Sbjct: 325 ERARKLKVNAGHLPGTDLGPVISPQSKQRINELVESGAKEGAKIVLDGRNIKVEGFEKGN 384
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI++DVT +M+CY EEIFGPVL+C+ D+++EAI+++N N YGNG AIFT++GA A
Sbjct: 385 FVGPTIISDVTPNMKCYTEEIFGPVLVCLSVDTIDEAIELINNNPYGNGTAIFTTNGATA 444
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RKF +I+ GQVG+NVPIPVPLP FSFTGS+ SF GD +FYGK G+ FYTQ KTVTQ WR
Sbjct: 445 RKFVNDIDVGQVGVNVPIPVPLPMFSFTGSRGSFLGDCHFYGKQGIKFYTQTKTVTQLWR 504
Query: 519 DLP-GGSGVSLAMPT 532
+ + ++AMPT
Sbjct: 505 EGDVSHTKAAVAMPT 519
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Anopheles gambiae (taxid: 7165) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
| >sp|Q7KW39|MMSA_DROME Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Drosophila melanogaster GN=CG17896 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust.
Identities = 309/495 (62%), Positives = 384/495 (77%), Gaps = 1/495 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P I G F+ES+++E+IDV +PAT +VV+++P T E +AA+ + K+AF SW N
Sbjct: 24 PTTKLFIDGKFVESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQS 83
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I TRQ+VM KLQ LI+ ++ +LA NIT EQGKTL DA+GDV RGL+VVEH C + +LQMG
Sbjct: 84 ILTRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCCSIPSLQMG 143
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E V NV+ +DTYSL PLGV AG+ PFNFPAMIPLWMFPVA+T GNT +LKPSE+ PGA
Sbjct: 144 ETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVAITTGNTMLLKPSERVPGA 203
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++L EL EAG P GV+N++HG HD VN ICD I+A+SFVGS+ AG +IY RA G
Sbjct: 204 TMLLMELLNEAGCPPGVVNVIHGQHDAVNFICDAPEIKAVSFVGSDQAGKYIYERAGKNG 263
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQSNMGAKNHGI+L DAN + TLN LA A FGAAGQRCMALST VFVGD+++W LV
Sbjct: 264 KRVQSNMGAKNHGIILGDANKENTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIPDLV 323
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERA+ LKVNAG D+GPVIS +++RI LI+SG++ GA+L+LDGR I VPGYE G
Sbjct: 324 ERAQKLKVNAGHVPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGY 383
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTIL+DVT M+CY EEIFGPVL+ ++AD+L++AI IVN N YGNG A+FT++GAAA
Sbjct: 384 FVGPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAVFTTNGAAA 443
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RKF EI+AGQVG+NVPIPVPLP FSFTG++ SF GD +FYGK G+ FYTQ KTVTQ WR
Sbjct: 444 RKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYGKQGIKFYTQTKTVTQLWR 503
Query: 519 DLP-GGSGVSLAMPT 532
+ ++AMPT
Sbjct: 504 KTDVTHTQAAVAMPT 518
|
Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | ||||||
| 225429271 | 539 | PREDICTED: methylmalonate-semialdehyde d | 0.988 | 0.981 | 0.864 | 0.0 | |
| 255554609 | 541 | methylmalonate-semialdehyde dehydrogenas | 0.990 | 0.979 | 0.884 | 0.0 | |
| 118486321 | 542 | unknown [Populus trichocarpa] | 1.0 | 0.987 | 0.865 | 0.0 | |
| 356524788 | 541 | PREDICTED: methylmalonate-semialdehyde d | 1.0 | 0.988 | 0.842 | 0.0 | |
| 224059886 | 497 | predicted protein [Populus trichocarpa] | 0.927 | 0.997 | 0.901 | 0.0 | |
| 356521227 | 537 | PREDICTED: methylmalonate-semialdehyde d | 0.988 | 0.985 | 0.840 | 0.0 | |
| 224103847 | 496 | predicted protein [Populus trichocarpa] | 0.927 | 1.0 | 0.901 | 0.0 | |
| 15225601 | 607 | Methylmalonate-semialdehyde dehydrogenas | 0.988 | 0.871 | 0.823 | 0.0 | |
| 297836048 | 534 | ALDH6B2 [Arabidopsis lyrata subsp. lyrat | 0.988 | 0.990 | 0.823 | 0.0 | |
| 307136462 | 520 | methylmalonate-semialdehyde dehydrogenas | 0.957 | 0.984 | 0.822 | 0.0 |
| >gi|225429271|ref|XP_002266390.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Vitis vinifera] gi|296085606|emb|CBI29381.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 982 bits (2538), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/533 (86%), Positives = 507/533 (95%), Gaps = 4/533 (0%)
Query: 7 SIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVIN 62
S+QRVRN K++RP++FA +FST + SKQ NPPRVPNLIGG+F++S+SSE+IDVIN
Sbjct: 5 SLQRVRNFKSLRPELFALGNSRFSTATEPSSKQRNPPRVPNLIGGSFVDSQSSEFIDVIN 64
Query: 63 PATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122
PATQ+VVSQ+PLT+NEEFKAAVSAAKQAFP+WRNTP+TTRQR+M KLQ+LIRRDIDKLAM
Sbjct: 65 PATQQVVSQIPLTSNEEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQQLIRRDIDKLAM 124
Query: 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAG 182
NITTEQGKTLKDA GDVFRGLEVVEH+CGMATLQMGE+VPNVS+GIDTYS+REPLGVCAG
Sbjct: 125 NITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEFVPNVSSGIDTYSIREPLGVCAG 184
Query: 183 ICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT 242
ICPFNFPAMIPLWMFP+AVTCGNTFVLKPSEKDPGAS+MLAELAMEAGLPDGVLNIVHGT
Sbjct: 185 ICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASLMLAELAMEAGLPDGVLNIVHGT 244
Query: 243 HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDAT 302
+ VNAICDD +IRA+SFVGSN AGMHIY+RASAKGKRVQSNMGAKNH IVLPDA++DAT
Sbjct: 245 RNIVNAICDDEDIRAVSFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVLPDASLDAT 304
Query: 303 LNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISK 362
LNAL AAGFGAAGQRCMALSTVVFVGDSKSWEDKL+ERAKALKVN+GTE DADLGPVISK
Sbjct: 305 LNALVAAGFGAAGQRCMALSTVVFVGDSKSWEDKLLERAKALKVNSGTEPDADLGPVISK 364
Query: 363 QAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGP 422
+AKERIC+LIQ+G++SGARL+LDGRNIVVPGYEHGNFIGPTIL+DVTADMECYKEEIFGP
Sbjct: 365 EAKERICKLIQNGVDSGARLVLDGRNIVVPGYEHGNFIGPTILSDVTADMECYKEEIFGP 424
Query: 423 VLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPF 482
VLLC+QADSL+EAI IVN+N+YGNGA+IFTSSG ARKFQTEIEAGQVGINVPIPVPLPF
Sbjct: 425 VLLCIQADSLDEAINIVNRNKYGNGASIFTSSGVDARKFQTEIEAGQVGINVPIPVPLPF 484
Query: 483 FSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
FSFTGSKASFAGDLNFYGKAGV FYTQIKTVTQQW+ L GSGVSLAMPTSQK
Sbjct: 485 FSFTGSKASFAGDLNFYGKAGVQFYTQIKTVTQQWKGLASGSGVSLAMPTSQK 537
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|255554609|ref|XP_002518343.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] gi|223542563|gb|EEF44103.1| methylmalonate-semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 978 bits (2528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/536 (88%), Positives = 502/536 (93%), Gaps = 6/536 (1%)
Query: 6 ASIQRVRNLKAV-RPQIFA----KFSTDAKLYSKQHNPP-RVPNLIGGAFIESRSSEYID 59
+SIQRVRN++A+ RPQIFA FST A+ S H RVPNLIGG F++S+SS ID
Sbjct: 5 SSIQRVRNVRALLRPQIFALRSSDFSTAAQPSSTSHRKSLRVPNLIGGTFVDSKSSSAID 64
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPATQE+VS +PLTTNEEFKAAVSAAK AFPSWRNTPITTRQR+MLKLQELIRRDIDK
Sbjct: 65 VINPATQEIVSHVPLTTNEEFKAAVSAAKLAFPSWRNTPITTRQRIMLKLQELIRRDIDK 124
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
LA+NIT EQGKTLKDA GDVFRGLEVVEH+CGMATLQMGEYVPNVSNGIDTYS+REPLGV
Sbjct: 125 LAVNITCEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVPNVSNGIDTYSIREPLGV 184
Query: 180 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239
CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI+LAELAMEAGLPDGVLNIV
Sbjct: 185 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPDGVLNIV 244
Query: 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299
HGT+D VNAICDD +IRAISFVGSN AGMHIY RASAKGKRVQSNMGAKNHGIVLPDANM
Sbjct: 245 HGTNDIVNAICDDDDIRAISFVGSNTAGMHIYGRASAKGKRVQSNMGAKNHGIVLPDANM 304
Query: 300 DATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPV 359
DATLNAL AAGFGAAGQRCMALSTVVFVGDS+SWE+KLVERAKALKVNAGTE DADLGPV
Sbjct: 305 DATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVERAKALKVNAGTEPDADLGPV 364
Query: 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEI 419
ISKQAKER+ RLIQSG+ESGA+LLLDGRNIVVPGYE GNFIGPTIL+ VTADMECYKEEI
Sbjct: 365 ISKQAKERVHRLIQSGVESGAKLLLDGRNIVVPGYELGNFIGPTILSGVTADMECYKEEI 424
Query: 420 FGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP 479
FGPVLLCMQADS EEAI IVN+N+YGNGAAIFT+SGAAARKFQTEIEAGQVGINVPIPVP
Sbjct: 425 FGPVLLCMQADSFEEAINIVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINVPIPVP 484
Query: 480 LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT+TQQW+DLP GSGVSLAMPTSQK
Sbjct: 485 LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPSGSGVSLAMPTSQK 540
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118486321|gb|ABK95002.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 969 bits (2506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/541 (86%), Positives = 501/541 (92%), Gaps = 6/541 (1%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFA-----KFSTDA-KLYSKQHNPPRVPNLIGGAFIESRS 54
ML SIQR RNLKA++P IFA FST + S +PPRVPNLIGG F++S+S
Sbjct: 1 MLPLKISIQRARNLKALKPSIFALRSSYYFSTGVVEPSSSLRSPPRVPNLIGGKFVDSQS 60
Query: 55 SEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR 114
S IDVINPATQEVVSQ+PLTTNEEFKAAVSAAK AFP+WRNTPITTRQRVMLKLQELIR
Sbjct: 61 SSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPITTRQRVMLKLQELIR 120
Query: 115 RDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLR 174
RD DKLAMNITTEQGKTLKDA GDVFRGLEVVEH+CGMATLQMGEYVPNV+NGIDT+S+R
Sbjct: 121 RDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGEYVPNVANGIDTFSIR 180
Query: 175 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDG 234
EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI+LAELAMEAGLP+G
Sbjct: 181 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNG 240
Query: 235 VLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL 294
VLNIVHGT+D VNAICDD +IRAISFVGSN AGMHIY+RASAKGKRVQSNMGAKNH IVL
Sbjct: 241 VLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGKRVQSNMGAKNHAIVL 300
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADA 354
PDAN DATLNAL AAGFGAAGQRCMALSTVVFVGDS+SWE+KLVE AK+LKVNAGTE DA
Sbjct: 301 PDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVECAKSLKVNAGTEPDA 360
Query: 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMEC 414
DLGPVISKQAKER+C+LI+SG+ESGARLLLDGRNIVVPGYE GNFIGPTIL+ VTADM+C
Sbjct: 361 DLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNFIGPTILSGVTADMDC 420
Query: 415 YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV 474
YKEEIFGPVLLC +ADS EEAI VN+N+YGNGAAIFT+SGAAARKFQTEIEAGQVGINV
Sbjct: 421 YKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAARKFQTEIEAGQVGINV 480
Query: 475 PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQ 534
PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT+TQQW+DLPGGSGVSLAMPTSQ
Sbjct: 481 PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKDLPGGSGVSLAMPTSQ 540
Query: 535 K 535
K
Sbjct: 541 K 541
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524788|ref|XP_003531010.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 956 bits (2472), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/541 (84%), Positives = 501/541 (92%), Gaps = 6/541 (1%)
Query: 1 MLTRLA--SIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRS 54
M TR+ SIQRVR L +RPQI A ST A+ S + NPPRVPNLIGG+F++S++
Sbjct: 1 METRMLRLSIQRVRKLNFLRPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKA 60
Query: 55 SEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR 114
S IDVINPATQEVVSQ+PL+T+EEFKAAVSAAK+AFPSWRNTPITTRQRVMLKLQELIR
Sbjct: 61 STVIDVINPATQEVVSQVPLSTHEEFKAAVSAAKEAFPSWRNTPITTRQRVMLKLQELIR 120
Query: 115 RDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLR 174
RD+DKLA+N+TTEQGKTLKDAQGDVFRGLEVVEH+CGMATLQMGEYV NVS+GIDTYS+R
Sbjct: 121 RDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIR 180
Query: 175 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDG 234
EPLGVCAGICPFNFPAMIPLWMFP+AVTCGNTFVLKPSEKDPGAS+MLAELA+EAGLP+G
Sbjct: 181 EPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPEG 240
Query: 235 VLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL 294
VLNIVHGTHD VNAICDD NI+AISFVGSNVAGMHIY+RA+AKGKRVQSNMGAKNH IV+
Sbjct: 241 VLNIVHGTHDIVNAICDDENIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVM 300
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADA 354
PDAN+DATLNAL A+GFGAAGQRCMALSTVVFVG SK WEDKL+ERAKALKVNAGTE D
Sbjct: 301 PDANVDATLNALVASGFGAAGQRCMALSTVVFVGGSKPWEDKLLERAKALKVNAGTEPDT 360
Query: 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMEC 414
DLGPVISKQAKERI RL+QSG+ESGARLLLDGRNIVVPGYE GNFIGPTIL+D+ A+MEC
Sbjct: 361 DLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMEC 420
Query: 415 YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV 474
YKEEIFGPVLL M+ADSLEEAI I+N N+YGNGA+IFT+SG AARKFQTEIEAGQVGINV
Sbjct: 421 YKEEIFGPVLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINV 480
Query: 475 PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQ 534
PIPVPLPFFSFTG+KASFAGDLNFYGKAGVNFYTQIKT+TQQW+D GGS ++LAMPTSQ
Sbjct: 481 PIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSRINLAMPTSQ 540
Query: 535 K 535
K
Sbjct: 541 K 541
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|224059886|ref|XP_002300008.1| predicted protein [Populus trichocarpa] gi|222847266|gb|EEE84813.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/496 (90%), Positives = 478/496 (96%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
RVPNLIGG F++S+SS IDVINPATQE VS++P TTNEEF+AAVSAAKQAFP+WRNTPI
Sbjct: 1 RVPNLIGGKFVDSQSSSTIDVINPATQEAVSRVPFTTNEEFRAAVSAAKQAFPAWRNTPI 60
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA GDVFRGLEVVEH+CGMATLQMGE
Sbjct: 61 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 120
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
YVPNVSNGIDT+S+REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKPSEKDPGAS
Sbjct: 121 YVPNVSNGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGAS 180
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
I+LAELAMEAGLPDGVLNIVHGT+D VNAICDD +IRAISFVGSN AGMHIY+RASAKGK
Sbjct: 181 IILAELAMEAGLPDGVLNIVHGTNDVVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVE 339
RVQSNMGAKNH IVLPDAN+DATLNAL AAGFGAAGQRCMALSTVVFVGD +SWE+KLVE
Sbjct: 241 RVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGDPQSWENKLVE 300
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
RAK+LKVN+G E DADLGPVISKQAKER+CRLIQSG+ESGARLLLDGRNIVVPG+EHGNF
Sbjct: 301 RAKSLKVNSGMEPDADLGPVISKQAKERVCRLIQSGVESGARLLLDGRNIVVPGFEHGNF 360
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
IGPTIL+ VTADMECYKEEIFGPVLLCM+A S EEAI I+N+N+YGNGAAIFT+SGAAAR
Sbjct: 361 IGPTILSGVTADMECYKEEIFGPVLLCMEAGSFEEAINILNRNKYGNGAAIFTASGAAAR 420
Query: 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT+TQQW+D
Sbjct: 421 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 480
Query: 520 LPGGSGVSLAMPTSQK 535
LPGGSGVSLAMPTSQK
Sbjct: 481 LPGGSGVSLAMPTSQK 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521227|ref|XP_003529258.1| PREDICTED: methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/533 (84%), Positives = 493/533 (92%), Gaps = 4/533 (0%)
Query: 7 SIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVIN 62
SIQRVR L + PQI A ST A+ S + NPPRVPNLIGG+F++S++S IDVIN
Sbjct: 5 SIQRVRKLNFLSPQISALGRSHLSTAAEPSSSKSNPPRVPNLIGGSFVDSKASTVIDVIN 64
Query: 63 PATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122
PATQEVVSQ+PL+T+EEFK AVSAAK+AFPSWRNTPITTRQRVMLKLQELIRRD+DKLA+
Sbjct: 65 PATQEVVSQVPLSTDEEFKEAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLAL 124
Query: 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAG 182
N+TTEQGKTLKDAQGDVFRGLEVVEH+CGMATLQMGEYV NVS+GIDTYS+REPLGVCAG
Sbjct: 125 NVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAG 184
Query: 183 ICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT 242
ICPFNFPAMIPLWMFP+A+TCGNTFVLKPSEKDPGAS+MLAELA+EAGLP+GVLNIVHGT
Sbjct: 185 ICPFNFPAMIPLWMFPMAITCGNTFVLKPSEKDPGASVMLAELALEAGLPEGVLNIVHGT 244
Query: 243 HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDAT 302
HD VNAICDD +I+AISFVGSNVAGMHIY+RA+AKGKRVQSNMGAKNH IV+ DAN+DAT
Sbjct: 245 HDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMADANVDAT 304
Query: 303 LNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISK 362
LNAL AAGFGAAGQRCMALSTVVFVG SK WEDKL+E AKALKVNAGTE D DLGPVISK
Sbjct: 305 LNALVAAGFGAAGQRCMALSTVVFVGGSKPWEDKLLEHAKALKVNAGTEPDTDLGPVISK 364
Query: 363 QAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGP 422
QAKERI RL+QSG+ESGARLLLDGRNIVVPGYE GNFIGPTIL+D+ A+MECYKEEIFGP
Sbjct: 365 QAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFIGPTILSDINANMECYKEEIFGP 424
Query: 423 VLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPF 482
VLL M+ADSLEEAI I+N N+YGNGA+IFT+SG AARKFQTEIEAGQVGINVPIPVPLPF
Sbjct: 425 VLLFMEADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPF 484
Query: 483 FSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
FSFTG+KASFAGDLNFYGKAGVNFYTQIKT+TQQW+D GGS ++LAMPTSQK
Sbjct: 485 FSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSTGGSKINLAMPTSQK 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|224103847|ref|XP_002313217.1| predicted protein [Populus trichocarpa] gi|222849625|gb|EEE87172.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/496 (90%), Positives = 476/496 (95%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
RVPNLIGG F++S+SS IDVINPATQEVVSQ+PLTTNEEFKAAVSAAK AFP+WRNTPI
Sbjct: 1 RVPNLIGGKFVDSQSSSTIDVINPATQEVVSQIPLTTNEEFKAAVSAAKHAFPAWRNTPI 60
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
TTRQRVMLKLQELIRRD DKLAMNITTEQGKTLKDA GDVFRGLEVVEH+CGMATLQMGE
Sbjct: 61 TTRQRVMLKLQELIRRDTDKLAMNITTEQGKTLKDAHGDVFRGLEVVEHACGMATLQMGE 120
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
YVPNV+NGIDT+S+REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS
Sbjct: 121 YVPNVANGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 180
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
I+LAELAMEAGLP+GVLNIVHGT+D VNAICDD +IRAISFVGSN AGMHIY+RASAKGK
Sbjct: 181 IILAELAMEAGLPNGVLNIVHGTNDIVNAICDDDDIRAISFVGSNTAGMHIYSRASAKGK 240
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVE 339
RVQSNMGAKNH IVLPDAN DATLNAL AAGFGAAGQRCMALSTVVFVGDS+SWE+KLVE
Sbjct: 241 RVQSNMGAKNHAIVLPDANTDATLNALVAAGFGAAGQRCMALSTVVFVGDSQSWENKLVE 300
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
AK+LKVNAGTE DADLGPVISKQAKER+C+LI+SG+ESGARLLLDGRNIVVPGYE GNF
Sbjct: 301 CAKSLKVNAGTEPDADLGPVISKQAKERVCKLIESGVESGARLLLDGRNIVVPGYEDGNF 360
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
IGPTIL+ VTADM+CYKEEIFGPVLLC +ADS EEAI VN+N+YGNGAAIFT+SGAAAR
Sbjct: 361 IGPTILSGVTADMDCYKEEIFGPVLLCKEADSFEEAIHFVNRNKYGNGAAIFTTSGAAAR 420
Query: 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT+TQQW+D
Sbjct: 421 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTITQQWKD 480
Query: 520 LPGGSGVSLAMPTSQK 535
LPGGSGVSLAMPTSQK
Sbjct: 481 LPGGSGVSLAMPTSQK 496
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15225601|ref|NP_179032.1| Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana] gi|118582304|sp|Q0WM29.2|MMSA_ARATH RecName: Full=Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; Short=MM-ALDH; Short=MMSDH; Short=Malonate-semialdehyde dehydrogenase [acylating]; AltName: Full=Aldehyde dehydrogenase family 6 member B2; Flags: Precursor gi|4587685|gb|AAD25855.1| putative methylmalonate semi-aldehyde dehydrogenase [Arabidopsis thaliana] gi|330251192|gb|AEC06286.1| Methylmalonate-semialdehyde dehydrogenase [acylating] [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/539 (82%), Positives = 496/539 (92%), Gaps = 10/539 (1%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSE 56
ML R++ NL+ +RPQ A ST + ++ PPRVPNLIGG+F+ES+SS
Sbjct: 74 MLLRISG----NNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSS 129
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116
+IDVINPATQEVVS++PLTTNEEFKAAVSAAKQAFP WRNTPITTRQRVMLK QELIR++
Sbjct: 130 FIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN 189
Query: 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
+DKLAMNITTEQGKTLKD+ GD+FRGLEVVEH+CGMATLQMGEY+PNVSNG+DTYS+REP
Sbjct: 190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREP 249
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKPSEKDPGAS++LAELAMEAGLPDGVL
Sbjct: 250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVL 309
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
NIVHGT+DTVNAICDD +IRA+SFVGSN AGMHIYARA+AKGKR+QSNMGAKNHG+VLPD
Sbjct: 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 369
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356
AN+DATLNAL AAGFGAAGQRCMALSTVVFVGD+KSWEDKLVERAKALKV G+E DADL
Sbjct: 370 ANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADL 429
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
GPVISKQAKERICRLIQSG++ GA+LLLDGR+IVVPGYE GNFIGPTIL+ VT DMECYK
Sbjct: 430 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYK 489
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476
EEIFGPVL+CMQA+S +EAI I+NKN+YGNGAAIFTSSGAAARKFQ +IEAGQ+GINVPI
Sbjct: 490 EEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI 549
Query: 477 PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
PVPLPFFSFTG+KASFAGDLNFYGKAGV+F+TQIKTVTQQW+D+P + VSLAMPTSQK
Sbjct: 550 PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIP--TSVSLAMPTSQK 606
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297836048|ref|XP_002885906.1| ALDH6B2 [Arabidopsis lyrata subsp. lyrata] gi|297331746|gb|EFH62165.1| ALDH6B2 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/539 (82%), Positives = 496/539 (92%), Gaps = 10/539 (1%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSE 56
ML R++ NL+ +RPQ A ST + ++ PPRVPNLIGG+F++S+SS
Sbjct: 1 MLLRVSG----NNLRPLRPQFLALRSSWLSTSPEKSTQPQMPPRVPNLIGGSFVDSQSSS 56
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116
+IDVINPATQEVVS++PLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLK QELIR++
Sbjct: 57 FIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKFQELIRKN 116
Query: 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
+DKLAMNITTEQGKTLKD+ GD+FRGLEVVEH+CGMATLQMGEYVPNVSNG+DTYS+REP
Sbjct: 117 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYVPNVSNGVDTYSIREP 176
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKP+EKDPGAS++LAELAMEAGLPDGVL
Sbjct: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPAEKDPGASVILAELAMEAGLPDGVL 236
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
NIVHGT+DTVNAICDD +IRA+SFVGSN AGMHIYARA+AKGKR+QSNMGAKNHG+VLPD
Sbjct: 237 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 296
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356
AN+DATLNAL AAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKV G+E DADL
Sbjct: 297 ANVDATLNALLAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVTCGSEPDADL 356
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
GPVISKQAKERICRLIQSG++ GA+LLLDGR+IVVPGYE GNFIGPTIL+ VT DMECYK
Sbjct: 357 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYK 416
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476
EEIFGPVL+CM+A S +EAI I+NKN+YGNGAAIFTSSGAAARKFQ +IEAGQ+GINVPI
Sbjct: 417 EEIFGPVLVCMEASSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI 476
Query: 477 PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
PVPLPFFSFTG+KASFAGDLNFYGKAGV+F+TQIKTVTQQW+D+P + VSLAMPTSQK
Sbjct: 477 PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIP--TSVSLAMPTSQK 533
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|307136462|gb|ADN34267.1| methylmalonate-semialdehyde dehydrogenase [Cucumis melo subsp. melo] | Back alignment and taxonomy information |
|---|
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/534 (82%), Positives = 481/534 (90%), Gaps = 22/534 (4%)
Query: 6 ASIQRVRNLKAVRPQIFA----KFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVI 61
+SI RV+ L +RPQIFA +FST A+ SK NPPRVPNLIGG F++S+SS +IDVI
Sbjct: 4 SSIWRVKKLSVLRPQIFALGNFRFSTFAEPSSKP-NPPRVPNLIGGTFVDSQSSAFIDVI 62
Query: 62 NPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121
NPATQEVVSQ+PLTT +EFKAAVSAAKQAFP+WRNTP+TTRQR+M KLQELI RDIDKLA
Sbjct: 63 NPATQEVVSQVPLTTKDEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELISRDIDKLA 122
Query: 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCA 181
+NITTEQGKTLKDA GDVFRGLEVVEH+CGMA+LQMGEYV NVS+GIDTYS+REPLGVCA
Sbjct: 123 LNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDTYSIREPLGVCA 182
Query: 182 GICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241
GICPFNFPAMIPLWMFP+AVTCGNTFVLKPSEKDPGASI+LAELAMEAGLP+GVLN+VHG
Sbjct: 183 GICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHG 242
Query: 242 THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDA 301
T+D VNAICDD +I+AISFVGSN+ SNMGAKNH IVLPDA +DA
Sbjct: 243 TNDVVNAICDDEDIKAISFVGSNI-----------------SNMGAKNHAIVLPDAGIDA 285
Query: 302 TLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVIS 361
TLNAL AAGFGAAGQRCMALSTVVFVGDSK WEDKLVERAKALKVN+GTE DADLGPVIS
Sbjct: 286 TLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKALKVNSGTEPDADLGPVIS 345
Query: 362 KQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFG 421
KQAK+RI RL+QSGI+SGARLLLDGRNIVVPGYEHGNFIGPTILTDVT DMECYKEEIFG
Sbjct: 346 KQAKDRIHRLVQSGIDSGARLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFG 405
Query: 422 PVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLP 481
PVLLCMQA+SLE+AI IVN N+YGNGA+IFT+SG AARKFQT+IEAGQVGINVPIPVPLP
Sbjct: 406 PVLLCMQAESLEDAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLP 465
Query: 482 FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
FFSFTGSKASFAGDLNFYGKAGVNF+TQIKTVTQQW+D GGS ++LAMPTS K
Sbjct: 466 FFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSTGGSAINLAMPTSLK 519
|
Source: Cucumis melo subsp. melo Species: Cucumis melo Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | ||||||
| TAIR|locus:2059456 | 607 | ALDH6B2 "AT2G14170" [Arabidops | 0.988 | 0.871 | 0.792 | 8.4e-232 | |
| ZFIN|ZDB-GENE-030131-9192 | 525 | aldh6a1 "aldehyde dehydrogenas | 0.897 | 0.914 | 0.597 | 2.4e-163 | |
| UNIPROTKB|F1S3H1 | 534 | ALDH6A1 "Uncharacterized prote | 0.985 | 0.986 | 0.554 | 3.1e-163 | |
| UNIPROTKB|J9P2I9 | 533 | ALDH6A1 "Uncharacterized prote | 0.986 | 0.990 | 0.556 | 5e-163 | |
| UNIPROTKB|F1N7K8 | 537 | ALDH6A1 "Methylmalonate-semial | 0.923 | 0.919 | 0.581 | 4.5e-162 | |
| RGD|621556 | 535 | Aldh6a1 "aldehyde dehydrogenas | 0.923 | 0.923 | 0.581 | 9.3e-162 | |
| UNIPROTKB|Q02252 | 535 | ALDH6A1 "Methylmalonate-semial | 0.986 | 0.986 | 0.545 | 1.5e-161 | |
| WB|WBGene00000114 | 523 | alh-8 [Caenorhabditis elegans | 0.949 | 0.971 | 0.578 | 2.5e-161 | |
| UNIPROTKB|P52713 | 523 | alh-8 "Probable methylmalonate | 0.949 | 0.971 | 0.578 | 2.5e-161 | |
| DICTYBASE|DDB_G0289085 | 528 | mmsdh "methylmalonate-semialde | 0.908 | 0.920 | 0.601 | 3.1e-161 |
| TAIR|locus:2059456 ALDH6B2 "AT2G14170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2236 (792.2 bits), Expect = 8.4e-232, P = 8.4e-232
Identities = 427/539 (79%), Positives = 478/539 (88%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAK----FSTDAKLYSKQHNPPRVPNLIGGAFIESRSSE 56
ML R++ NL+ +RPQ A ST + ++ PPRVPNLIGG+F+ES+SS
Sbjct: 74 MLLRISG----NNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSS 129
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116
+IDVINPATQEVVS++PLTTNEEFKAAVSAAKQAFP WRNTPITTRQRVMLK QELIR++
Sbjct: 130 FIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN 189
Query: 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
+DKLAMNITTEQGKTLKD+ GD+FRGLEVVEH+CGMATLQMGEY+PNVSNG+DTYS+REP
Sbjct: 190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREP 249
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKPSEKDPGAS++LAELAMEAGLPDGVL
Sbjct: 250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVL 309
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPX 296
NIVHGT+DTVNAICDD +IRA+SFVGSN AGMHIYARA+AKGKR+QSNMGAKNHG+VLP
Sbjct: 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 369
Query: 297 XXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356
GQRCMALSTVVFVGD+KSWEDKLVERAKALKV G+E DADL
Sbjct: 370 ANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADL 429
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
GPVISKQAKERICRLIQSG++ GA+LLLDGR+IVVPGYE GNFIGPTIL+ VT DMECYK
Sbjct: 430 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYK 489
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476
EEIFGPVL+CMQA+S +EAI I+NKN+YGNGAAIFTSSGAAARKFQ +IEAGQ+GINVPI
Sbjct: 490 EEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI 549
Query: 477 PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 535
PVPLPFFSFTG+KASFAGDLNFYGKAGV+F+TQIKTVTQQW+D+P + VSLAMPTSQK
Sbjct: 550 PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIP--TSVSLAMPTSQK 606
|
|
| ZFIN|ZDB-GENE-030131-9192 aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1590 (564.8 bits), Expect = 2.4e-163, P = 2.4e-163
Identities = 287/480 (59%), Positives = 370/480 (77%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P I G F+ES+SS+++D+ NPAT EV+ ++P T EE AAV + +AF +W T
Sbjct: 28 PTTKLFIDGKFVESKSSQWLDIHNPATSEVIGRVPKATQEEMLAAVDSCSRAFQTWSETS 87
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I RQ++ + Q+LI+ +I +LA IT EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 88 ILARQQIFFRYQQLIKDNIKELAKLITLEQGKTLADAEGDVFRGLQVVEHTCSITSLMLG 147
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +DTY+ R P+GVCAGI PFNFPAMIPLWMFP+ + CGNT++LKPSE+ PG
Sbjct: 148 ETLPSLTKDMDTYTYRLPIGVCAGIAPFNFPAMIPLWMFPMGMVCGNTYLLKPSERVPGC 207
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++MLA+L +AG PDG LNI+HG HD VN ICD IRAISFVGSN AG +IY R S G
Sbjct: 208 TMMLAKLLQDAGAPDGTLNIIHGQHDAVNFICDHPAIRAISFVGSNQAGEYIYERGSKNG 267
Query: 279 KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQSNMGAKNHG+++P GQRCMALST + VG+++ W +LV
Sbjct: 268 KRVQSNMGAKNHGVIMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEARDWLPELV 327
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERAK+L+VNAG + AD+GP+IS QAKER+ LIQSG++ GA++LLDGRN+ V GYE+GN
Sbjct: 328 ERAKSLRVNAGDQPGADVGPLISPQAKERVNSLIQSGVDEGAKVLLDGRNVKVKGYENGN 387
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++VT +M CYKEEIFGPVL+ ++ADSL+EAIKIVNKN YGNG AIFT++GAAA
Sbjct: 388 FVGPTIISNVTPEMTCYKEEIFGPVLVVLEADSLDEAIKIVNKNPYGNGTAIFTTNGAAA 447
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ E++ GQ+G+NVPIPVPLP FSFTGS+ SF GD NFYGK G+ FYTQIKT+T QW+
Sbjct: 448 RKYSHEVDVGQIGVNVPIPVPLPMFSFTGSRGSFRGDTNFYGKQGIQFYTQIKTITSQWK 507
|
|
| UNIPROTKB|F1S3H1 ALDH6A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1589 (564.4 bits), Expect = 3.1e-163, P = 3.1e-163
Identities = 295/532 (55%), Positives = 396/532 (74%)
Query: 5 LASIQRVRNLKAVRPQIFAKFSTD---AKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVI 61
+A++ ++A Q+ +K ++ A +S + P V IGG FIES+S ++ID+
Sbjct: 1 MAAVLAAAAVRARILQVSSKVNSSWHPASSFSSS-SVPTVKLFIGGKFIESKSDKWIDIH 59
Query: 62 NPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121
NPAT E++ ++P T E AAVS+ K+AFP+W +T I +RQ+V+L+ Q+LI+ ++ ++A
Sbjct: 60 NPATNELIGRVPQATKAEMDAAVSSCKRAFPAWADTSILSRQQVLLRYQQLIKENLKEIA 119
Query: 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCA 181
IT EQGKTL DA+GDVFRGL+VVEH+C + +L +GE +P+++ +D YS R PLGVCA
Sbjct: 120 KLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCA 179
Query: 182 GICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241
GI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA+++LA+L ++G PDG LN++HG
Sbjct: 180 GIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNVIHG 239
Query: 242 THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXX 301
H+ VN ICD +I+AISFVGSN AG +I+ R S GKRVQ+NMGAKNHG+V+P
Sbjct: 240 QHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKEN 299
Query: 302 XXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVIS 361
GQRCMALST + VG++K W +LVERAK L+VNAG + ADLGP+IS
Sbjct: 300 TLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLIS 359
Query: 362 KQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFG 421
QAKER+C LI SG + GA +LLDGRNI V GYE+GNF+GPTI+++V +M CYKEEIFG
Sbjct: 360 PQAKERVCNLIDSGTKEGASILLDGRNIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFG 419
Query: 422 PVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLP 481
PVL+ ++ D+L+EAIKIVN N YGNG AIFT++GA ARK+ ++ GQVG+NVPIPVPLP
Sbjct: 420 PVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLP 479
Query: 482 FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG-SGVSLAMPT 532
FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW++ S ++ MPT
Sbjct: 480 MFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVMPT 531
|
|
| UNIPROTKB|J9P2I9 ALDH6A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 295/530 (55%), Positives = 392/530 (73%)
Query: 5 LASIQRVRNLKAVRPQIFAKF-STDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINP 63
+A++ ++A Q+ +K ST YS + P V I G F+ES+S ++ID+ NP
Sbjct: 1 MAAVVAAAAMRARILQVSSKVNSTWYPAYSFSSSVPTVKLFIDGKFVESKSDKWIDIHNP 60
Query: 64 ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMN 123
AT EV+ ++P T E AAV++ K+AFP+W +T + +RQ+V+L+ Q+LI+ ++ ++A
Sbjct: 61 ATNEVIGRVPQATKAEMDAAVTSCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIAKL 120
Query: 124 ITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGI 183
IT EQGKTL DA+GDVFRGL+VVEH+C + +L +GE +P+++ +D YS R PLGVCAGI
Sbjct: 121 ITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLGETMPSITKDMDLYSYRLPLGVCAGI 180
Query: 184 CPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH 243
PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGAS++LA+L ++G PDG LNI+HG H
Sbjct: 181 APFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGASMLLAKLLQDSGAPDGTLNIIHGQH 240
Query: 244 DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXXXX 303
+ VN ICD +I+AISFVGSN AG +I+ R S GKRVQ+NMGAKNHG+V+P
Sbjct: 241 EAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKENTL 300
Query: 304 XXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQ 363
GQRCMALST + VG++K W +LVERAK L+VNAG + ADLGP+I+ Q
Sbjct: 301 NQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELVERAKNLRVNAGDQPGADLGPLITPQ 360
Query: 364 AKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPV 423
AKER+C LI SG + GA +LLDGR I V GYE+GNF+GPTI+++V M CYKEEIFGPV
Sbjct: 361 AKERVCNLIDSGTKEGASILLDGRKIKVKGYENGNFVGPTIISNVKPTMTCYKEEIFGPV 420
Query: 424 LLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFF 483
L+ ++ D+L+EAIKIVN N YGNG AIFT++GA ARK+ ++ GQVG+NVPIPVPLP F
Sbjct: 421 LVVLETDTLDEAIKIVNSNPYGNGTAIFTTNGATARKYSHLVDVGQVGVNVPIPVPLPMF 480
Query: 484 SFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG-SGVSLAMPT 532
SFTGS++SF GD NFYGK G+ FYTQIKT+T QW++ S ++ MPT
Sbjct: 481 SFTGSRSSFRGDTNFYGKQGIQFYTQIKTITSQWKEEDATLSSPAVVMPT 530
|
|
| UNIPROTKB|F1N7K8 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 288/495 (58%), Positives = 378/495 (76%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V I G FIES+S ++ID+ NPAT EV+ ++P +T E AAVS+ K+ FP+W +T
Sbjct: 40 PTVKLFIDGKFIESKSDKWIDIHNPATNEVIGRVPESTKAEMDAAVSSCKRTFPAWADTS 99
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+V+L+ Q+LI+ ++ ++A IT EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 100 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 159
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 160 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 219
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG H+ VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 220 TMLLAKLFQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRHG 279
Query: 279 KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+P GQRCMALST + VG++K W +LV
Sbjct: 280 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAILVGEAKKWLPELV 339
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERAK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR+I V GYE+GN
Sbjct: 340 ERAKKLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRSIKVKGYENGN 399
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V +M CYKEEIFGPVL+ ++ D+L+EAIKIVN N YGNG AIFT++GA A
Sbjct: 400 FVGPTIISNVKPNMTCYKEEIFGPVLVVLETDTLDEAIKIVNDNPYGNGTAIFTTNGATA 459
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS+ASF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 460 RKYSHLVDVGQVGVNVPIPVPLPMFSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWK 519
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 520 EEDASLSSPAVVMPT 534
|
|
| RGD|621556 Aldh6a1 "aldehyde dehydrogenase 6 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1575 (559.5 bits), Expect = 9.3e-162, P = 9.3e-162
Identities = 288/495 (58%), Positives = 378/495 (76%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P V I G F+ES+S ++ID+ NPAT EVV ++P +T E +AAV+A K+AFP+W +T
Sbjct: 38 PTVKLFIDGKFVESKSDKWIDIHNPATNEVVGRVPQSTKAEMEAAVAACKRAFPAWADTS 97
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
I +RQ+V+L+ Q+LI+ ++ ++A IT EQGKTL DA+GDVFRGL+VVEH+C + +L +G
Sbjct: 98 ILSRQQVLLRYQQLIKENLKEIARLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMLG 157
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
E +P+++ +D YS R PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA
Sbjct: 158 ETMPSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGA 217
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+++LA+L ++G PDG LNI+HG H+ VN ICD +I+AISFVGSN AG +I+ R S G
Sbjct: 218 TMLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNQAGEYIFERGSRNG 277
Query: 279 KRVQSNMGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLV 338
KRVQ+NMGAKNHG+V+P GQRCMALST V VG++K W +LV
Sbjct: 278 KRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELV 337
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
ERAK L+VNAG + ADLGP+I+ QAKER+C LI SG + GA +LLDGR I V GYE+GN
Sbjct: 338 ERAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGAKEGASILLDGRKIKVKGYENGN 397
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+GPTI+++V M CYKEEIFGPVL+ ++ ++L+EAIKIVN N YGNG AIFT++GA A
Sbjct: 398 FVGPTIISNVKPSMTCYKEEIFGPVLVVLETETLDEAIKIVNDNPYGNGTAIFTTNGAIA 457
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
RK+ ++ GQVG+NVPIPVPLP FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW+
Sbjct: 458 RKYAHMVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWK 517
Query: 519 DLPGG-SGVSLAMPT 532
+ S ++ MPT
Sbjct: 518 EEDATLSSPAVVMPT 532
|
|
| UNIPROTKB|Q02252 ALDH6A1 "Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
Identities = 290/532 (54%), Positives = 392/532 (73%)
Query: 5 LASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNPPRVPNL---IGGAFIESRSSEYIDVI 61
+A++ ++A Q+ +K + YS VP + IGG F+ES+S ++ID+
Sbjct: 1 MAALLAAAAVRARILQVSSKVKSSPTWYSASSFSSSVPTVKLFIGGKFVESKSDKWIDIH 60
Query: 62 NPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121
NPAT EV+ ++P T E AA+++ K+AFP+W +T + +RQ+V+L+ Q+LI+ ++ ++A
Sbjct: 61 NPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTSVLSRQQVLLRYQQLIKENLKEIA 120
Query: 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCA 181
IT EQGKTL DA+GDVFRGL+VVEH+C + +L MGE +P+++ +D YS R PLGVCA
Sbjct: 121 KLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMGETMPSITKDMDLYSYRLPLGVCA 180
Query: 182 GICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241
GI PFNFPAMIPLWMFP+A+ CGNTF++KPSE+ PGA+++LA+L ++G PDG LNI+HG
Sbjct: 181 GIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGATMLLAKLLQDSGAPDGTLNIIHG 240
Query: 242 THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXXX 301
H+ VN ICD +I+AISFVGSN AG +I+ R S GKRVQ+NMGAKNHG+V+P
Sbjct: 241 QHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRHGKRVQANMGAKNHGVVMPDANKEN 300
Query: 302 XXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVIS 361
GQRCMALST V VG++K W +LVE AK L+VNAG + ADLGP+I+
Sbjct: 301 TLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLPELVEHAKNLRVNAGDQPGADLGPLIT 360
Query: 362 KQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFG 421
QAKER+C LI SG + GA +LLDGR I V GYE+GNF+GPTI+++V +M CYKEEIFG
Sbjct: 361 PQAKERVCNLIDSGTKEGASILLDGRKIKVKGYENGNFVGPTIISNVKPNMTCYKEEIFG 420
Query: 422 PVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLP 481
PVL+ ++ ++L+EAI+IVN N YGNG AIFT++GA ARK+ ++ GQVG+NVPIPVPLP
Sbjct: 421 PVLVVLETETLDEAIQIVNNNPYGNGTAIFTTNGATARKYAHLVDVGQVGVNVPIPVPLP 480
Query: 482 FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG-SGVSLAMPT 532
FSFTGS++SF GD NFYGK G+ FYTQ+KT+T QW++ S ++ MPT
Sbjct: 481 MFSFTGSRSSFRGDTNFYGKQGIQFYTQLKTITSQWKEEDATLSSPAVVMPT 532
|
|
| WB|WBGene00000114 alh-8 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
Identities = 300/519 (57%), Positives = 382/519 (73%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDV 60
ML+RLA +Q + Q A FST + P V I G +ES++++++++
Sbjct: 1 MLSRLARVQP-------KCQQLAHFSTSKSAAAA----PTVKLWIDGQAVESKTTDFVEL 49
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
NPAT EV++ +P T E +AAV +AK AF +W+NT TRQ+ M KLQ LI+RD+ KL
Sbjct: 50 TNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPLTRQQCMFKLQALIKRDMKKL 109
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A +IT EQGKTL DA+GDV RGL+VVEH+C + +L MGE +PNVS +DT+S R PLGV
Sbjct: 110 AESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVT 169
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
AGICPFNFPAMIPLWMFPVA+ GNT V+KPSE+DPGA+ +L ELA EAG+PDG +NI+H
Sbjct: 170 AGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLVELAKEAGVPDGCVNIIH 229
Query: 241 GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXX 300
G H VN ICD+ +I+AISFVG + AG HIY R + GKRVQSNMGAKNHG+++
Sbjct: 230 GQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKRVQSNMGAKNHGVIMADANKE 289
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVI 360
GQRCMAL+T V VG++++W +LVE+AK LKVNAG + D D+GP+I
Sbjct: 290 QTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEKAKNLKVNAGWKPDTDIGPLI 349
Query: 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIF 420
SKQ+K R+ RLI+S + GA++ LDG NI VPG+E+GNF+GPTIL V +M CY+EEIF
Sbjct: 350 SKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFVGPTILAGVKPNMTCYREEIF 409
Query: 421 GPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPL 480
GPVL+ M+A++L EAI+I+N N YGNG AIFTS+GA ARKF E++ GQ+GINVPIPVPL
Sbjct: 410 GPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKFTNEVDVGQIGINVPIPVPL 469
Query: 481 PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
P FSFTGS+ SF GDLNFYGKAG+ FYTQ KTVTQ W +
Sbjct: 470 PMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNE 508
|
|
| UNIPROTKB|P52713 alh-8 "Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
Identities = 300/519 (57%), Positives = 382/519 (73%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDV 60
ML+RLA +Q + Q A FST + P V I G +ES++++++++
Sbjct: 1 MLSRLARVQP-------KCQQLAHFSTSKSAAAA----PTVKLWIDGQAVESKTTDFVEL 49
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
NPAT EV++ +P T E +AAV +AK AF +W+NT TRQ+ M KLQ LI+RD+ KL
Sbjct: 50 TNPATNEVIAMVPNATQAEMQAAVDSAKNAFNTWKNTSPLTRQQCMFKLQALIKRDMKKL 109
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A +IT EQGKTL DA+GDV RGL+VVEH+C + +L MGE +PNVS +DT+S R PLGV
Sbjct: 110 AESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMGETLPNVSRDMDTHSYRIPLGVT 169
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
AGICPFNFPAMIPLWMFPVA+ GNT V+KPSE+DPGA+ +L ELA EAG+PDG +NI+H
Sbjct: 170 AGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLVELAKEAGVPDGCVNIIH 229
Query: 241 GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPXXXXX 300
G H VN ICD+ +I+AISFVG + AG HIY R + GKRVQSNMGAKNHG+++
Sbjct: 230 GQHSAVNFICDNPDIKAISFVGGDAAGKHIYERGAKNGKRVQSNMGAKNHGVIMADANKE 289
Query: 301 XXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVI 360
GQRCMAL+T V VG++++W +LVE+AK LKVNAG + D D+GP+I
Sbjct: 290 QTLNQLTAAAFGAAGQRCMALTTAVLVGEARAWLPELVEKAKNLKVNAGWKPDTDIGPLI 349
Query: 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIF 420
SKQ+K R+ RLI+S + GA++ LDG NI VPG+E+GNF+GPTIL V +M CY+EEIF
Sbjct: 350 SKQSKARVLRLIESAKKEGAQVPLDGSNITVPGFENGNFVGPTILAGVKPNMTCYREEIF 409
Query: 421 GPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPL 480
GPVL+ M+A++L EAI+I+N N YGNG AIFTS+GA ARKF E++ GQ+GINVPIPVPL
Sbjct: 410 GPVLVVMEAENLNEAIEIINNNPYGNGTAIFTSNGATARKFTNEVDVGQIGINVPIPVPL 469
Query: 481 PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
P FSFTGS+ SF GDLNFYGKAG+ FYTQ KTVTQ W +
Sbjct: 470 PMFSFTGSRGSFLGDLNFYGKAGIQFYTQWKTVTQYWNE 508
|
|
| DICTYBASE|DDB_G0289085 mmsdh "methylmalonate-semialdehyde dehydrogenase (acylating)" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1570 (557.7 bits), Expect = 3.1e-161, P = 3.1e-161
Identities = 293/487 (60%), Positives = 368/487 (75%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G F+ES++ E+++V NPATQE+V+++P++T EE +AAV AA AFP+WR+T ++ R R
Sbjct: 34 INGKFVESKTKEWLEVRNPATQELVTKVPVSTKEEMEAAVKAASDAFPAWRDTSVSNRSR 93
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV 164
++ + LI +++DK+A IT EQGKTL DA+GDVFRGLEVVEHS +A+L MGE V NV
Sbjct: 94 IISNYKNLINKNMDKIAAIITEEQGKTLPDAKGDVFRGLEVVEHSVNVASLMMGETVENV 153
Query: 165 SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE 224
S +D YS +PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTFVLKPSE+ P AS+ L +
Sbjct: 154 SKNVDIYSYVQPLGVCAGITPFNFPAMIPLWMFPLAIACGNTFVLKPSERVPSASMFLVQ 213
Query: 225 LAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSN 284
LA EAG+PDGV+N++HG + VN ICD +RAISFVG++ AG HI+AR +A GKRVQSN
Sbjct: 214 LAQEAGVPDGVVNVIHGGKEAVNFICDAPEVRAISFVGADQAGRHIHARGTANGKRVQSN 273
Query: 285 MGAKNHGIVLPXXXXXXXXXXXXXXXXXXXGQRCMALSTVVFVGDSKSWEDKLVERAKAL 344
M AKNH ++P GQRCMALS VFVG+SK+W +L ERAK L
Sbjct: 274 MAAKNHATIVPDAHKERTLDALTGAAFGASGQRCMALSAAVFVGESKNWIPELAERAKKL 333
Query: 345 KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV-PGYEHGNFIGPT 403
KV G ADLGPVIS +K+RI LIQSGI+ GA+ +LDGRN+VV P + GNF+GPT
Sbjct: 334 KVAGGAAPGADLGPVISAASKQRIHELIQSGIDEGAKCILDGRNVVVDPEFSKGNFVGPT 393
Query: 404 ILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463
ILTDV M CYKEEIFGPVL+C+ D++++AI+++N N YGNG A+FTSSGA ARK+Q
Sbjct: 394 ILTDVKPHMRCYKEEIFGPVLVCLNVDTVDQAIQLINANPYGNGTAVFTSSGAVARKYQR 453
Query: 464 EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG 523
EI+ GQVGIN+PIPVPLPFFSFTGS+ SF G +FYGK GV F+TQIKT+T WRD
Sbjct: 454 EIDVGQVGINLPIPVPLPFFSFTGSRGSFVGAGHFYGKTGVQFFTQIKTITSNWRDDDIS 513
Query: 524 SGVSLAM 530
GVS +M
Sbjct: 514 HGVSSSM 520
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| B7IW48 | IOLA_BACC2 | 1, ., 2, ., 1, ., 1, 8 | 0.4626 | 0.8859 | 0.9753 | yes | no |
| A4IPB2 | IOLA1_GEOTN | 1, ., 2, ., 1, ., 1, 8 | 0.4854 | 0.8785 | 0.9710 | yes | no |
| A8FDV4 | IOLA_BACP2 | 1, ., 2, ., 1, ., 1, 8 | 0.4492 | 0.8803 | 0.9691 | yes | no |
| Q17M80 | MMSA_AEDAE | 1, ., 2, ., 1, ., 2, 7 | 0.6121 | 0.9233 | 0.9481 | N/A | no |
| B7HR31 | IOLA_BACC7 | 1, ., 2, ., 1, ., 1, 8 | 0.4613 | 0.8915 | 0.9814 | yes | no |
| Q7KW39 | MMSA_DROME | 1, ., 2, ., 1, ., 2, 7 | 0.6242 | 0.9233 | 0.95 | yes | no |
| Q8ES27 | IOLA1_OCEIH | 1, ., 2, ., 1, ., 1, 8 | 0.4537 | 0.8859 | 0.9753 | yes | no |
| C1KZ99 | IOLA_LISMC | 1, ., 2, ., 1, ., 1, 8 | 0.4425 | 0.8878 | 0.9733 | yes | no |
| Q9EQ20 | MMSA_MOUSE | 1, ., 2, ., 1, ., 2, 7 | 0.6020 | 0.9233 | 0.9233 | yes | no |
| Q29HB2 | MMSA_DROPS | 1, ., 2, ., 1, ., 2, 7 | 0.6202 | 0.9233 | 0.95 | yes | no |
| Q9KAH5 | IOLA_BACHD | 1, ., 2, ., 1, ., 1, 8 | 0.4573 | 0.8859 | 0.9773 | yes | no |
| P52713 | MMSA_CAEEL | 1, ., 2, ., 1, ., 2, 7 | 0.6030 | 0.9495 | 0.9713 | yes | no |
| A7ZAI1 | IOLA_BACA2 | 1, ., 2, ., 1, ., 1, 8 | 0.4488 | 0.8878 | 0.9753 | yes | no |
| Q6HIK3 | IOLA2_BACHK | 1, ., 2, ., 1, ., 1, 8 | 0.4782 | 0.8841 | 0.9712 | yes | no |
| Q65IX1 | IOLA1_BACLD | 1, ., 2, ., 1, ., 1, 8 | 0.4626 | 0.8934 | 0.9876 | yes | no |
| A0REB5 | IOLA2_BACAH | 1, ., 2, ., 1, ., 1, 8 | 0.4708 | 0.8897 | 0.9774 | yes | no |
| Q4V1F6 | IOLA3_BACCZ | 1, ., 2, ., 1, ., 1, 8 | 0.4687 | 0.8897 | 0.9774 | yes | no |
| Q738L2 | IOLA_BACC1 | 1, ., 2, ., 1, ., 1, 8 | 0.4585 | 0.8859 | 0.9753 | yes | no |
| Q7QC84 | MMSA_ANOGA | 1, ., 2, ., 1, ., 2, 7 | 0.6020 | 0.9233 | 0.9481 | yes | no |
| Q02252 | MMSA_HUMAN | 1, ., 2, ., 1, ., 2, 7 | 0.5979 | 0.9233 | 0.9233 | yes | no |
| Q02253 | MMSA_RAT | 1, ., 2, ., 1, ., 2, 7 | 0.6060 | 0.9233 | 0.9233 | yes | no |
| A9VMS6 | IOLA2_BACWK | 1, ., 2, ., 1, ., 1, 8 | 0.4668 | 0.8971 | 0.9937 | yes | no |
| Q723T1 | IOLA_LISMF | 1, ., 2, ., 1, ., 1, 8 | 0.4446 | 0.8878 | 0.9733 | yes | no |
| Q92EQ7 | IOLA_LISIN | 1, ., 2, ., 1, ., 1, 8 | 0.4405 | 0.8878 | 0.9733 | yes | no |
| Q8Y9Y4 | IOLA_LISMO | 1, ., 2, ., 1, ., 1, 8 | 0.4425 | 0.8878 | 0.9733 | yes | no |
| Q63B74 | IOLA2_BACCZ | 1, ., 2, ., 1, ., 1, 8 | 0.4711 | 0.9009 | 0.9877 | yes | no |
| B7H597 | IOLA_BACC4 | 1, ., 2, ., 1, ., 1, 8 | 0.4626 | 0.8859 | 0.9753 | yes | no |
| Q81QB6 | IOLA2_BACAN | 1, ., 2, ., 1, ., 1, 8 | 0.4782 | 0.8841 | 0.9712 | yes | no |
| A7GPH3 | IOLA_BACCN | 1, ., 2, ., 1, ., 1, 8 | 0.4592 | 0.8915 | 0.9814 | yes | no |
| Q5L025 | IOLA1_GEOKA | 1, ., 2, ., 1, ., 1, 8 | 0.4842 | 0.8859 | 0.9713 | yes | no |
| B8DCT8 | IOLA_LISMH | 1, ., 2, ., 1, ., 1, 8 | 0.4405 | 0.8878 | 0.9733 | yes | no |
| Q81DR5 | IOLA_BACCR | 1, ., 2, ., 1, ., 1, 8 | 0.4626 | 0.8859 | 0.9753 | yes | no |
| Q0WM29 | MMSA_ARATH | 1, ., 2, ., 1, ., 2, 7 | 0.8237 | 0.9887 | 0.8714 | yes | no |
| P42412 | IOLA_BACSU | 1, ., 2, ., 1, ., 1, 8 | 0.4446 | 0.8878 | 0.9753 | yes | no |
| B9IZZ7 | IOLA_BACCQ | 1, ., 2, ., 1, ., 1, 8 | 0.4613 | 0.8915 | 0.9814 | yes | no |
| Q07536 | MMSA_BOVIN | 1, ., 2, ., 1, ., 2, 7 | 0.6020 | 0.9233 | 0.9199 | yes | no |
| Q5WKZ1 | IOLA1_BACSK | 1, ., 2, ., 1, ., 1, 8 | 0.4592 | 0.8878 | 0.9674 | yes | no |
| Q54I10 | MMSA_DICDI | 1, ., 2, ., 1, ., 2, 7 | 0.6209 | 0.9102 | 0.9223 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00005784001 | SubName- Full=Chromosome chr3 scaffold_158, whole genome shotgun sequence; (539 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00029757001 | SubName- Full=Chromosome chr10 scaffold_50, whole genome shotgun sequence; (293 aa) | • | • | • | • | 0.945 | |||||
| GSVIVG00038001001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa) | • | • | • | • | 0.932 | |||||
| GSVIVG00016121001 | SubName- Full=Chromosome chr17 scaffold_12, whole genome shotgun sequence; (511 aa) | • | • | • | 0.902 | ||||||
| GSVIVG00020768001 | SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (531 aa) | • | • | • | 0.902 | ||||||
| GSVIVG00020472001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (461 aa) | • | • | 0.900 | |||||||
| GSVIVG00036847001 | SubName- Full=Chromosome chr4 scaffold_83, whole genome shotgun sequence; (485 aa) | • | • | 0.899 | |||||||
| GSVIVG00034061001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (450 aa) | • | • | 0.899 | |||||||
| GSVIVG00033040001 | SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (428 aa) | • | 0.899 | ||||||||
| GSVIVG00028844001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (538 aa) | • | • | 0.899 | |||||||
| GSVIVG00024617001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (485 aa) | • | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 535 | |||
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 0.0 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 0.0 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 1e-177 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 1e-156 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-134 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-128 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-126 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 1e-120 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-113 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-110 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-106 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-106 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-104 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-104 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-104 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-101 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-101 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 3e-99 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 9e-99 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 2e-98 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 2e-98 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 5e-97 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 6e-97 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 2e-95 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 2e-91 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-89 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-89 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 2e-89 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 3e-89 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 2e-88 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 2e-88 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-88 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 3e-88 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 6e-88 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 2e-86 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 3e-86 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-85 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 2e-85 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-84 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 4e-83 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 9e-83 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-82 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-82 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 3e-82 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 6e-82 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 5e-81 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-80 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 3e-80 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 3e-80 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 8e-80 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 8e-78 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 2e-77 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 4e-76 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 2e-72 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 4e-72 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 2e-71 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 4e-70 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 2e-69 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 6e-69 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-68 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 3e-68 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 3e-68 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 9e-68 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 2e-67 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 4e-65 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 4e-64 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 6e-64 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-63 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 6e-63 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-62 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 4e-60 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 5e-60 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-59 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-59 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 2e-57 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 1e-56 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 2e-53 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 1e-52 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 4e-52 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 7e-52 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 2e-51 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 8e-51 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 2e-46 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 4e-45 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 8e-45 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 5e-43 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 5e-37 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 2e-36 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 1e-35 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-35 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-34 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 3e-34 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 2e-33 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-32 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 3e-29 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-28 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-27 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-27 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 6e-25 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 6e-25 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-23 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 2e-22 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-22 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-21 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 9e-17 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-15 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 6e-15 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-14 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 7e-11 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 9e-11 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 3e-10 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 7e-10 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 1e-06 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 916 bits (2368), Expect = 0.0
Identities = 435/537 (81%), Positives = 488/537 (90%), Gaps = 10/537 (1%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAK----FSTDAKLYSKQHNPPRVPNLIGGAFIESRSSE 56
ML R++ NL+ +RPQ A ST + ++ PPRVPNLIGG+F+ES+SS
Sbjct: 74 MLLRISG----NNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSS 129
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116
+IDVINPATQEVVS++PLTTNEEFKAAVSAAKQAFP WRNTPITTRQRVMLK QELIR++
Sbjct: 130 FIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKN 189
Query: 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
+DKLAMNITTEQGKTLKD+ GD+FRGLEVVEH+CGMATLQMGEY+PNVSNG+DTYS+REP
Sbjct: 190 MDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREP 249
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGVCAGICPFNFPAMIPLWMFPVAVTCGNTF+LKPSEKDPGAS++LAELAMEAGLPDGVL
Sbjct: 250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVL 309
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
NIVHGT+DTVNAICDD +IRA+SFVGSN AGMHIYARA+AKGKR+QSNMGAKNHG+VLPD
Sbjct: 310 NIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPD 369
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356
AN+DATLNAL AAGFGAAGQRCMALSTVVFVGD+KSWEDKLVERAKALKV G+E DADL
Sbjct: 370 ANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDADL 429
Query: 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYK 416
GPVISKQAKERICRLIQSG++ GA+LLLDGR+IVVPGYE GNFIGPTIL+ VT DMECYK
Sbjct: 430 GPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYK 489
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476
EEIFGPVL+CMQA+S +EAI I+NKN+YGNGAAIFTSSGAAARKFQ +IEAGQ+GINVPI
Sbjct: 490 EEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI 549
Query: 477 PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTS 533
PVPLPFFSFTG+KASFAGDLNFYGKAGV+F+TQIK VTQ+ +D+ S SLA+P
Sbjct: 550 PVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQKDIH--SPFSLAIPIL 604
|
Length = 604 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 889 bits (2301), Expect = 0.0
Identities = 307/478 (64%), Positives = 375/478 (78%), Gaps = 1/478 (0%)
Query: 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
+ I G ++ES+++E++DV NPAT EV++++PL T EE AAV+AAK AFP+W TP+
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
RQ+VM K ++L+ ++D+LA IT E GKTL DA+GDV RGLEVVE +C + L GEY
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
+ NV+ GIDTYS R+PLGV AGI PFNFPAMIPLWMFP+A+ CGNTFVLKPSE+ PGA++
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAM 180
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAEL EAGLPDGVLN+VHG + VNA+ D +I+A+SFVGS G +IY RA+A GKR
Sbjct: 181 RLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVE 339
VQ+ GAKNH +V+PDA+++ T NAL A FGAAGQRCMALS V VGD + W KLVE
Sbjct: 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVE 300
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
RAK LKV AG + AD+GPVIS AKERI LI+SG+E GA+L+LDGR + VPGYE+GNF
Sbjct: 301 RAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNF 360
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+GPTIL +VT DM+ YKEEIFGPVL ++ D+L+EAI I+N N YGNGAAIFT SGAAAR
Sbjct: 361 VGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAAR 420
Query: 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
KFQ E++AG VGINVPIPVPL FFSF G K SF GDL+FYGK GV FYTQ KTVT +W
Sbjct: 421 KFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 695 bits (1795), Expect = 0.0
Identities = 261/477 (54%), Positives = 341/477 (71%)
Query: 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
V + IGG F E S YI V NPAT EV +++ + +E AAV++A++ F +W T +
Sbjct: 1 VNHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLA 60
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R V+L+ Q L++ D++A IT E GKT DA GDV RGLEVVEH+CG+ +L GE
Sbjct: 61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGET 120
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
V+ +D YS+R+PLGVCAGI PFNFPAMIPLWMFP+A+ CGNTFVLKPSEK P A++
Sbjct: 121 STQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAV 180
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAEL EAG PDGVLN+VHG + V+ + + +++A+SFVGS G +I+ SA GKR
Sbjct: 181 KLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER 340
VQ+ GAKNH +V+PDA+ DA +AL A +GAAGQRCMA+S V VG + W ++ ER
Sbjct: 241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRER 300
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
A+ +++ G + A++GP+I+ QAK+R+ LI G GA +LLDGR V GYE GN++
Sbjct: 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWV 360
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
GPT+L V M+ Y+EEIFGPVL ++AD+LEEAI ++N + YGNG AIFT GAAAR+
Sbjct: 361 GPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARR 420
Query: 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
FQ EIE GQVG+NVPIPVPLP+FSFTG K SF GD + YGK G +FYT+ KTVT +W
Sbjct: 421 FQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 506 bits (1306), Expect = e-177
Identities = 188/467 (40%), Positives = 264/467 (56%), Gaps = 10/467 (2%)
Query: 49 FIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLK 108
+++S SSE I+VINPAT EV++ +P T E+ AAV+AA+ AF +W TP + R ++LK
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 109 LQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGI 168
+L+ D+LA T E GK L +A+G+V R ++ + + G+A GE +P G+
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLP-SDPGV 118
Query: 169 DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
Y+ REPLGV I P+NFP ++ W A+ GNT VLKPSE P +++LAEL E
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 229 AGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287
AGLP GVLN+V G+ + +A+ + ++ +SF GS G I A+ KRV +G
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGG 238
Query: 288 KNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSW-EDKLVERAKALKV 346
KN IV DA++DA + FG AGQ C A S ++ ++LVE AK+LKV
Sbjct: 239 KNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKV 298
Query: 347 NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT 406
+ D D+GP+ISK+ +ER+ I+ E GA+LL G G E G F+ PT+L
Sbjct: 299 GDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGE----AGLEKGYFVEPTVLA 354
Query: 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE 466
DVT DM +EEIFGPVL + +EAI++ N +YG A +FT+ A + +E
Sbjct: 355 DVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLE 414
Query: 467 AGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
AG V IN F G K S G GK G+ YT+ KTV
Sbjct: 415 AGMVWINDYTTGDPEALPFGGFKQSGFGR--EGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 454 bits (1171), Expect = e-156
Identities = 187/482 (38%), Positives = 266/482 (55%), Gaps = 16/482 (3%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LI G +++ S I+VINPAT EV++ +P T E+ AAV+AA+ AF +W R
Sbjct: 3 LLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEER 60
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ ++ +L+ ++LA IT E GK + +A+G++ R + + + A GE +P
Sbjct: 61 AAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP 120
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
G REPLGV I P+NFP + W A+ GNT VLKPSE+ P +++ L
Sbjct: 121 -TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALAL 179
Query: 223 AELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AELA EAGLP GVLN+V G + +A+ ++ AISF GS G I A A+A K V
Sbjct: 180 AELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPV 239
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKS--WEDKLVE 339
+G K+ IVL DA++DA ++A F AGQRC A S + V +S + ++LV
Sbjct: 240 TLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAAS-RLIVHESVYDEFVERLVA 298
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
RA +LKV + DLGP+IS++ +R+ I+ + GARLL G+ G F
Sbjct: 299 RAASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR------PGGYF 352
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PTIL VT DM +EEIFGPVL ++ EEAI++ N +YG AAIFT A A
Sbjct: 353 VEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAF 412
Query: 460 KFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518
+ +EAG VGIN + + F G K S G GK G+ +T++KTVT +
Sbjct: 413 RVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVTIKLG 470
Query: 519 DL 520
Sbjct: 471 PA 472
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 395 bits (1017), Expect = e-134
Identities = 169/437 (38%), Positives = 228/437 (52%), Gaps = 11/437 (2%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFR 141
AAV+AA+ AF +W P R ++ KL +L+ ++LA T E GK +++A G+V R
Sbjct: 2 AAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVAR 61
Query: 142 GLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201
+ + G+A GE +P+ G REPLGV I P+NFP ++ W A+
Sbjct: 62 AADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPAL 121
Query: 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISF 260
GNT VLKPSE P +++LAEL EAGLP GVLN+V G D V A+ + ISF
Sbjct: 122 AAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISF 181
Query: 261 VGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMA 320
GS G I A+ KRV +G K+ IV DA++DA + FG AGQ C A
Sbjct: 182 TGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTA 241
Query: 321 LSTVVFVGDSKSWE---DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIE 377
S + V ++ ++LVER KALKV + D D+GP+IS +R+ I+
Sbjct: 242 AS-RLLV-HESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKA 299
Query: 378 SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437
GA+LL G+ G F+ PT+LTDV DM +EEIFGPVL + EEAI+
Sbjct: 300 EGAKLLCGGK---RLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIE 356
Query: 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLN 497
+ N +YG A +FT A + +EAG V IN P F G K S G
Sbjct: 357 LANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQS--GIGR 414
Query: 498 FYGKAGVNFYTQIKTVT 514
G G+ YT+ KTVT
Sbjct: 415 EGGPYGLEEYTEPKTVT 431
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 382 bits (984), Expect = e-128
Identities = 176/487 (36%), Positives = 256/487 (52%), Gaps = 32/487 (6%)
Query: 42 PNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
N I G ++ E NP+ T +VV + + E+ AA++AA AFP+WR T
Sbjct: 2 RNYIDGEWVAGGDGEE--NRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPE 59
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R ++ K + + ++LA +T E+GKTL +A+G+V R ++ + G A GE
Sbjct: 60 ARADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGET 119
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
+P+ G++ + REPLGV I P+NFP IP W A+ GNT V KP+E P ++
Sbjct: 120 LPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAW 179
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
L E+ EAGLP GV N+V G+ V A+ + ++ A+SF GS G I A A+A+G
Sbjct: 180 ALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV--------FVGDSK 331
RVQ MG KN +VL DA++D + F + GQRC A S ++ FV
Sbjct: 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFV---- 295
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+ LVER KALKV + D+GPV+S++ E+ R I+ GA+L+ G +
Sbjct: 296 ---EALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL-- 350
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
+ G ++ P + VT DM +EEIFGPV ++ +EA+ I N ++G A I
Sbjct: 351 KRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIV 410
Query: 452 TSSGAAARKFQTEIEAGQVGINVP-----IPVPLPFFSFTGSKASFAGDLNFYGKAGVNF 506
T+S A F+ +EAG V +N+P VP F G K S G G+A + F
Sbjct: 411 TTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVP-----FGGRKGSSYG-PREQGEAALEF 464
Query: 507 YTQIKTV 513
YT IKTV
Sbjct: 465 YTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 378 bits (972), Expect = e-126
Identities = 186/478 (38%), Positives = 265/478 (55%), Gaps = 10/478 (2%)
Query: 43 NLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITT 101
N IGG +++S S E D NPA +EVV PL+T + AAV AA++AFP WR P
Sbjct: 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPR 60
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R + + EL+++ ++LA +T E GK L + +GDV +++ +++ G GE V
Sbjct: 61 RAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETV 120
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
P+ D + R+P+GV A I P+NFP IP W A+ CGNT V KP+E P ++
Sbjct: 121 PSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALK 180
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
L EL EAGLP GV+N+VHG + V A+ + ++ +SF GS G I + KR
Sbjct: 181 LVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALST-VVFVGDSKSWEDKLVE 339
V MG KN IV+ DA++D L + FG GQRC A S +V + + VE
Sbjct: 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVE 300
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
RAK L+V G + + D+GP+I++ E++ + G E GA LLL G + GYE G F
Sbjct: 301 RAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYF 360
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ TDVT DM +EEIFGPV+ ++ SLEEAI+I N +YG +AI+T A
Sbjct: 361 VEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAF 420
Query: 460 KFQTEIEAGQVGINVPI---PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ + ++EAG +N P V LP F G K S G G ++ +T+ K V
Sbjct: 421 RARRDLEAGITYVNAPTIGAEVHLP---FGGVKKSGNG-HREAGTTALDAFTEWKAVY 474
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 360 bits (928), Expect = e-120
Identities = 173/466 (37%), Positives = 252/466 (54%), Gaps = 25/466 (5%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPAT EV+ ++P + AA+ AA AF +WR T R ++ + +LIR +
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
LA +T EQGK L +A+G+V +E A G +P+ + G +++P+GV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 180 CAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
A I P+NFP AMI + P A+ G T VLKP+E+ P +++ LAELA EAGLP GVLN+
Sbjct: 121 VAAITPWNFPAAMITRKIAP-ALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNV 179
Query: 239 VHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG--IVLP 295
V G+ + A+C +R ISF GS G + A+A+ KRV +G + IV
Sbjct: 180 VTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGG--NAPFIVFD 237
Query: 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEAD 353
DA++D ++ A+ F AGQ C+ + ++V +S E +KLVER K LKV G +
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVC-ANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEG 296
Query: 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
D+GP+I+++A E++ L++ + GA++L G+ + + GY F PT+LTDVT DM
Sbjct: 297 TDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGY----FYEPTVLTDVTDDML 352
Query: 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
EE FGPV + D+ +E I N YG A +FT A A + +EAG VGIN
Sbjct: 353 IMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGIN 412
Query: 474 VPIPVPLPFFSFTGSKASFAGDLNFYG----KAGVNFYTQIKTVTQ 515
+ F G K S G G K G+ Y + K V+
Sbjct: 413 TGLI-SDAEAPFGGVKES--G----LGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 342 bits (880), Expect = e-113
Identities = 163/470 (34%), Positives = 239/470 (50%), Gaps = 31/470 (6%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
NPAT EV++++P E AAV+AAK+AFP W R R++ K+ +LI D+
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 120 LAMNITTEQGKTLKDAQ-GDVFRGL-------EVVEHSCGMATLQMGEYVPNVSNGIDTY 171
LA+ + + GK + A+ D+ R + + G + Q G + Y
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGAL--------NY 112
Query: 172 SLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
LR+P+GV I P+N P M+ W A+ GNT VLKPSE P + +LAELA EAGL
Sbjct: 113 VLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGL 172
Query: 232 PDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNH 290
P GV+N+VHG + A+ ++ ISF G G I A+ K V +G KN
Sbjct: 173 PPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNP 232
Query: 291 GIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNA 348
IV DA++D ++A + F G+ C+A + + V S E ++ VERAKALKV
Sbjct: 233 NIVFADADLDRAVDAAVRSSFSNNGEVCLA-GSRILVQRSIYDEFLERFVERAKALKVGD 291
Query: 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDV 408
+ D ++GP+ISK+ E++ ++ GA +L G +P E G F+ PT++T +
Sbjct: 292 PLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGL 351
Query: 409 TADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468
D +EEIFGPV+ + D EEAI++ N YG A ++T A + +EAG
Sbjct: 352 DNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAG 411
Query: 469 QVGINVPI----PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
V +N + P F G KAS G G + FYT++K V
Sbjct: 412 TVWVNCWLVRDLRTP-----FGGVKASGIGREG--GDYSLEFYTELKNVC 454
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 336 bits (865), Expect = e-110
Identities = 176/473 (37%), Positives = 260/473 (54%), Gaps = 12/473 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G F+ S S E IDV+NPAT EVV+ +P T E+ AV AA+ A +W P R
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAA 61
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV 164
+ KL +LIR + D+LA I EQGKTL A+ +V + +++ A GE +P+
Sbjct: 62 YLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSD 121
Query: 165 SNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
+ + + P+GV AGI P+NFP +I + P A+ GNT V+KPSE+ P ++ A
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP-ALVTGNTIVIKPSEETPLNALEFA 180
Query: 224 ELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282
EL EAGLP GVLNIV G V +A+ + IS GS AG I A+ +V
Sbjct: 181 ELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240
Query: 283 SNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVER 340
+G K IV+ DA++D + A+ + GQ C + V+V + + +KLVE+
Sbjct: 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTC-AERVYVHEDIYDEFMEKLVEK 299
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
KA+KV +A D+GP++++ A +++ +++ +E+GA LL G+ P E G F
Sbjct: 300 MKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGK---RPEGEKGYFY 356
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
PT+LT+V DME +EEIFGPVL ++ SL+EAI++ N ++YG + I+T + A +
Sbjct: 357 EPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMR 416
Query: 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
E+E G+ IN + F G K S G + GK G+ Y Q K V
Sbjct: 417 ATNELEFGETYINRENFEAMQGFH-AGWKKSGLGGAD--GKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 324 bits (833), Expect = e-106
Identities = 162/463 (34%), Positives = 241/463 (52%), Gaps = 17/463 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRRDI 117
INPAT E +++P + + AV+AA+ AF +WR T R +++ +L +LI +
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL 177
++LA T + GK +++ + V E + G+A G +P ++ REPL
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 178 GVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237
GV A I P+N P ++ A+ GNT VLKPSE P +++ LA+LA EAG P GV+N
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVN 180
Query: 238 IVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
+V G +T A+ + + I+F G G HI A+ V +G K+ IV D
Sbjct: 181 VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADA 354
A++DA +N + A F AAGQ C+A S + V S + ++LV RA+A++V + +
Sbjct: 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRL-LVQRSIYDEFVERLVARARAIRVGDPLDPET 299
Query: 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMEC 414
+GP+ +++ E++ R + E GAR+L G G F PTIL DVT DM
Sbjct: 300 QMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRI 359
Query: 415 YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN- 473
+EE+FGPVL + D EEAI + N ++YG A I+T A A + IEAG V +N
Sbjct: 360 AQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNT 419
Query: 474 ---VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
+ P F G K S G N G + YTQ K+V
Sbjct: 420 YRALSPSSP-----FGGFKDSGIGREN--GIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 324 bits (834), Expect = e-106
Identities = 138/441 (31%), Positives = 227/441 (51%), Gaps = 12/441 (2%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+IGG ++ S E NPA E ++++ + E+ +AAV+AA++AF WR P R
Sbjct: 1 GVIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ ++ E +R+ + L ++ E GK L + G+V +++ +++ G++ + G +P
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
+ G PLGV I FNFP +P W +A+ CGNT V KPSE P +I +
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 223 AELAMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++ E GLP GV+N+V G D + D + +SF GS G + + +
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDK 336
RV +G N IV+ DA++D + A+ A G AGQRC + V +S + ++
Sbjct: 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRR-LIVHESVYDEFLER 298
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
LV+ K +++ + +GP+I++ A E+ I+ G +L G+ + G E
Sbjct: 299 LVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGK--RIDGGEP 356
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
GN++ PTI+T VT D +EE F P+L ++ DSLEEAI I N G ++IFT
Sbjct: 357 GNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLR 416
Query: 457 AARKFQ--TEIEAGQVGINVP 475
A ++ + G V +N+P
Sbjct: 417 EAFRWLGPKGSDCGIVNVNIP 437
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 321 bits (826), Expect = e-104
Identities = 179/486 (36%), Positives = 254/486 (52%), Gaps = 32/486 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITT 101
I F++S S + INPAT+EV+ Q+ E+ AAV AA+ AF WR
Sbjct: 7 FINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRE 66
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKD-AQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++ KL +LI RD D+LA + + GK L++ A+GDV ++ + + G A G+
Sbjct: 67 RGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKT 126
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
+P N + Y+ REP+GVC I P+NFP ++ W A+ GNT VLKP+E+ P +++
Sbjct: 127 IPIDGNFL-AYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSAL 185
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKG- 278
LAEL EAG P GV+NIV G T AI ++ I+F GS G I A+AK
Sbjct: 186 YLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTI-MEAAAKSN 244
Query: 279 -KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--D 335
K+V +G K+ IV DA++D + A F GQ C A S +FV +S E +
Sbjct: 245 LKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSR-IFVQESIYDEFVE 303
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
K RA+ V + D GP +SK ++I I+SG + GA LL G GY
Sbjct: 304 KFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGY- 362
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ TDV DM+ KEEIFGPV+ ++ + +E I+ N +YG A +FT
Sbjct: 363 ---FIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDI 419
Query: 456 AAARKFQTEIEAGQVGIN------VPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYT 508
A + ++AG V +N +P F G K S F +L G+ G+ YT
Sbjct: 420 NKALRVSRALKAGTVWVNTYNVFDAAVP-------FGGFKQSGFGREL---GEEGLEEYT 469
Query: 509 QIKTVT 514
Q+K VT
Sbjct: 470 QVKAVT 475
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 319 bits (821), Expect = e-104
Identities = 162/456 (35%), Positives = 234/456 (51%), Gaps = 14/456 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPAT EV + P+ + + AV+AAK AFP W TP+ R+ +L + + I + ++
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
LA +T EQGK L +AQ +V + + + A+L + + V + R+PLGV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRY---TASLDLPDEVIEDDDTRRVELRRKPLGV 117
Query: 180 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239
A I P+NFP ++ W A+ GNT VLKPS P ++ L ELA E LP GVLN+V
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299
G + A+ +IR ISF GS G + A A+ KRV +G + IVLPD ++
Sbjct: 177 SGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236
Query: 300 DATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLG 357
DA L F +GQ C A+ ++V +S + + LV AKA V G + LG
Sbjct: 237 DAVAPKLFWGAFINSGQVCAAIKR-LYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLG 295
Query: 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKE 417
PV +K +++ L++ GA++L G + PGY FI PTI+ D E
Sbjct: 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGY----FIPPTIVDDPPEGSRIVDE 351
Query: 418 EIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP 477
E FGPVL ++ +E I N ++YG GA++++S A +EAG V IN
Sbjct: 352 EQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWIN-THG 410
Query: 478 VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
P F G K S G + F G G+ YTQ + +
Sbjct: 411 ALDPDAPFGGHKQSGIG-VEF-GIEGLKEYTQTQVI 444
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 321 bits (826), Expect = e-104
Identities = 182/491 (37%), Positives = 255/491 (51%), Gaps = 25/491 (5%)
Query: 41 VPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
P +IGG + R+ E I+ NPA EV+ + T EE +AAV AA+ AFP+WR TP
Sbjct: 33 YPLVIGGKEV--RTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPP 90
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R R++L+ L+RR +LA + E GK +A DV ++ +E+ L++
Sbjct: 91 EERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREM-LRLRG 149
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+ + G D + PLGV A I P+NFP I M A+ GNT VLKP+E P +
Sbjct: 150 FPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIA 209
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS--A 276
L E+ EAGLP GV+N + G + V + + + ++R I+F GS G+ IY RA+
Sbjct: 210 AKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQ 269
Query: 277 KG----KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SK 331
G KRV + MG KN IV DA++D + + FG GQ+C A S V+
Sbjct: 270 PGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYD 329
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+ ++LVER KALKV + + +GPVI K A++RI R I+ G G RLLL G V+
Sbjct: 330 EFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGE--VL 386
Query: 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451
G F+ PTI DV D +EEIFGPVL ++A +EA++I N +YG +F
Sbjct: 387 ELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVF 446
Query: 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLP-FFSFTGSKASFAGDLNFYGKAGVNFY--- 507
+ S + + E E G + N I L F G K S G KAG Y
Sbjct: 447 SRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTG-----SKAGGPDYLLQ 501
Query: 508 -TQIKTVTQQW 517
Q KTVT+ +
Sbjct: 502 FMQPKTVTENF 512
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 314 bits (806), Expect = e-101
Identities = 167/475 (35%), Positives = 254/475 (53%), Gaps = 12/475 (2%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTR 102
I G ++E+ S + D+INPA EV++ +P T E+ K A++AA++AF S W + P R
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ ++ + IR D ++LA T GKTL++++ D+ + G+AT + GE
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD 121
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
V + + ++REP+GVC I P+N+P + W A+ GNT V+KPSE P +I L
Sbjct: 122 -VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
EL EAGLP GV+N+V G+ TV + + ++ +SF G G I A+ K+V
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKV 240
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVE 339
+G KN IV DA+ + ++ F AGQ C A S ++ V +S + L E
Sbjct: 241 ALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLL-VEESIHDKFVAALAE 299
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
RAK +K+ G +AD ++GP++S + +E++ IQ G E GARL+ G+ G F
Sbjct: 300 RAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYF 359
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PTI DV M +EEIFGPVL + D+ EEAI++ N YG A++T A A
Sbjct: 360 VEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARAN 419
Query: 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTV 513
+ + AG V IN P + G K S G +L G G+ Y + K +
Sbjct: 420 RVARRLRAGTVWINDYHPY-FAEAPWGGYKQSGIGREL---GPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 313 bits (803), Expect = e-101
Identities = 164/445 (36%), Positives = 234/445 (52%), Gaps = 29/445 (6%)
Query: 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118
D +NPA V +++ + + ++ + A++AA AFP+W T + R+R++LK E++ R D
Sbjct: 2 DDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRAD 61
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
L + E G T A + E++ + G GE +P+ S G + S+R PLG
Sbjct: 62 DLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLG 121
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V AGI PFN+P ++ A+ GNT VLKPSE+ P + +AE+ EAGLP GV N+
Sbjct: 122 VVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNV 181
Query: 239 VHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297
V G V + + DD +R ++F GS G I +A K++ +G KN IVL DA
Sbjct: 182 VTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLADA 241
Query: 298 NMDATLNALAAAGFGA---AGQRCMALSTV--------VFVGDSKSWEDKLVERAKALKV 346
++D A+ AA FGA GQ CM+ S + FV K V RA LKV
Sbjct: 242 DLD---YAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFV-------KKFVARASKLKV 291
Query: 347 NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT 406
+ D +GP+IS + ERI R ++ + GA+LL G GNF PT+LT
Sbjct: 292 GDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLL-------TGGKYDGNFYQPTVLT 344
Query: 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE 466
DVT DM ++EE FGPV + A EEA+++ N +YG AAI T+ A K +E
Sbjct: 345 DVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLE 404
Query: 467 AGQVGINVPIPVPLPFFSFTGSKAS 491
+G V IN P + F G KAS
Sbjct: 405 SGMVHINDPTILDEAHVPFGGVKAS 429
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 306 bits (787), Expect = 3e-99
Identities = 155/447 (34%), Positives = 228/447 (51%), Gaps = 32/447 (7%)
Query: 81 KAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVF 140
A +AA A +W TP R ++ K E++ D++A + E G T A +V
Sbjct: 3 DRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVG 62
Query: 141 RGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200
+ ++ + G+ GE +P+ G ++ R PLGV I PFNFP ++ + A
Sbjct: 63 AAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPA 122
Query: 201 VTCGNTFVLKPSEKDP-GASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAI 258
+ GN VLKP + P +++AE+ EAGLP GVLN+V G + +A+ + +R I
Sbjct: 123 LALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMI 182
Query: 259 SFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGA---AG 315
SF GS G HI A K+V +G N IVL DA++D A++AA FGA G
Sbjct: 183 SFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDL---AVSAAAFGAFLHQG 239
Query: 316 QRCMALSTVV--------FVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKER 367
Q CMA ++ FV +KLV +AKAL V + D +GP+I+++ +R
Sbjct: 240 QICMAAGRILVHESVYDEFV-------EKLVAKAKALPVGDPRDPDTVIGPLINERQVDR 292
Query: 368 ICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM 427
+ +++ + +GARLL G YE G F PT+L+DVT DM ++EEIFGPV +
Sbjct: 293 VHAIVEDAVAAGARLLTGGT------YE-GLFYQPTVLSDVTPDMPIFREEIFGPVAPVI 345
Query: 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTG 487
D EEA+++ N +YG AA+FT A F +E G V IN P F G
Sbjct: 346 PFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGG 405
Query: 488 SKASFAGDLNFYGKAGVNFYTQIKTVT 514
KAS G G A + +T+ + +T
Sbjct: 406 VKASGGGRFG--GPASLEEFTEWQWIT 430
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 306 bits (786), Expect = 9e-99
Identities = 169/479 (35%), Positives = 246/479 (51%), Gaps = 25/479 (5%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I GA++ +E IDVINPAT+EV+ +PL T + AV+AA++AFP+W T + R
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAA 62
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD-VFRGLEVVEHSCGMA-TLQMGEYVP 162
++ ++ E D+LA IT E G + A+ V G+ + + + E
Sbjct: 63 LLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRG 122
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPA-MIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
N + +REP+GVC I P+N+P I L + P A+ G T VLKPSE P ++I+
Sbjct: 123 N------SLVVREPIGVCGLITPWNWPLNQIVLKVAP-ALAAGCTVVLKPSEVAPLSAII 175
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAE+ EAGLP GV N+V+G V A+ ++ +SF GS AG + A+ KR
Sbjct: 176 LAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER 340
V +G K+ I+L DA+++ + AA F +GQ C A T + V +S + E
Sbjct: 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAP-TRMLV--PRSRYAEAEEI 292
Query: 341 AKAL----KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
A A V + LGP+ S +R+ IQ GIE GARL+ G G E
Sbjct: 293 AAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPE-GLER 351
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
G F+ PT+ DVT DM +EEIFGPVL + D +EAI I N YG ++++
Sbjct: 352 GYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPE 411
Query: 457 AARKFQTEIEAGQVGINVPIPVPL-PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
AR + AGQV IN P P F G K S G+ +G+ G+ + ++K++
Sbjct: 412 RARAVARRLRAGQVHINGAAFNPGAP---FGGYKQS--GNGREWGRYGLEEFLEVKSIQ 465
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 2e-98
Identities = 165/461 (35%), Positives = 249/461 (54%), Gaps = 16/461 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VI PAT EV++ + E+ AV +AK A W T R R++ K +L+R D+
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
+A T + GK +++A+ D+ + +E+ G+A GE+VP + G Y+ REPLGV
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP-LPGGSFAYTRREPLGV 119
Query: 180 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239
CAGI +N+P I W A+ CGN V KPS P +++LAE+ EAGLPDGV N+V
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVV 179
Query: 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299
G +T +C+ ++ +SF GS G + + A+ K V +G K+ I+ DA++
Sbjct: 180 QGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239
Query: 300 DATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLG 357
+ +N A F + GQ C T VFV S + ++LVER K +++ + D +G
Sbjct: 240 ENAVNGAMMANFLSQGQVCSN-GTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMG 298
Query: 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVV-PGYEHGNFIGPTILTDVTADMECYK 416
+IS++ E++ I+S + GA++L G +V G E+G ++ P +LTD T DM +
Sbjct: 299 ALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVR 358
Query: 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN--- 473
EEIFGPV+ + D+ EE I+ N YG A +FT A + +++AG IN
Sbjct: 359 EEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYN 418
Query: 474 -VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
P+ VP F G K S G N G A + YTQ+KTV
Sbjct: 419 ISPVEVP-----FGGYKQSGFGREN--GTAALEHYTQLKTV 452
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 2e-98
Identities = 156/474 (32%), Positives = 241/474 (50%), Gaps = 15/474 (3%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G ++E + ++INPA EV++ + T E+ + A++AA++A W R R
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGR 61
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPN 163
++ + +LIR ++LA T + GKTL++ D+ G +V E G+A GE +P
Sbjct: 62 ILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIP- 120
Query: 164 VSNGID-TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
G Y++REPLGVC GI +N+P I W A+ GN V KPSE P ++ +
Sbjct: 121 -LGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKV 179
Query: 223 AELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AE+ EAGLP GV N+V G + + + ++ +SF G G I A A+ K V
Sbjct: 180 AEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHV 239
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVE 339
+G K+ IV DA++++ ++ F +AGQ C T VFV + + +LVE
Sbjct: 240 TMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSN-GTRVFVHKKIKERFLARLVE 298
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
R + +K+ + ++GP+IS ++++ I+ G GA L G G ++G F
Sbjct: 299 RTERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFF 358
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ D T DM +EEIFGPV+ + +E I N +YG +FT+ A
Sbjct: 359 VEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAH 418
Query: 460 KFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
+ ++EAG V IN P P F G K S G N GKA + YT++K
Sbjct: 419 RVADQLEAGTVWINTYNLYPAEAP---FGGYKQSGIGREN--GKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 302 bits (776), Expect = 5e-97
Identities = 168/480 (35%), Positives = 255/480 (53%), Gaps = 12/480 (2%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P I GA++E+ S E +VINPAT EV++ + T + +AAV++AKQ W
Sbjct: 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMT 64
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQM 157
R R++ + +++R D+LA T + GK +++ D+ G +V+E+ G+A
Sbjct: 65 AMERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALE 124
Query: 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
GE +P + G Y+ REPLGVCAGI +N+P I W A+ GN + KPSE P
Sbjct: 125 GEQIP-LRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPL 183
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277
++ LAE+ EAGLPDGV N+V G + + +I +SF G G + A A+A
Sbjct: 184 TALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWED 335
K V +G K+ IV DA++D + A F ++GQ C T VFV S ++E
Sbjct: 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTN-GTRVFVQKSIKAAFEA 302
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+L+ER + +++ + + GP++S ++++ I+ G GARLL G + G+
Sbjct: 303 RLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFA 362
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
+G F+ PT+ TD T DM +EEIFGPV+ + D +E I N +YG A +FT+
Sbjct: 363 NGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADL 422
Query: 456 AAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
+ A + ++EAG IN P +P G K S G N G A + YTQIK+V
Sbjct: 423 SRAHRVIHQLEAGICWINTWGESPAEMP---VGGYKQSGIGREN--GIATLEHYTQIKSV 477
|
Length = 488 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = 6e-97
Identities = 164/462 (35%), Positives = 230/462 (49%), Gaps = 16/462 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQRVMLKLQELIRRDID 118
V +P+T EV +++ + AV AA++AF S W R R++L++ LIR D
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
+LA + + GK L A+ DV E+ G A GE +P + G Y++REP G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIP-LGPGYFVYTVREPHG 119
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V I P+N+P I A+ GN V+KP+E P ++ LAELA EAGLP G LN+
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 239 VHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGIVLPD 296
V G + A+ + ISF GS G+ + RA+A+ V +G K+ IV D
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAV-MRAAAENVVPVTLELGGKSPQIVFAD 238
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSK-SWEDKLVERAKALKVNAGTEADAD 355
A+++A L + A AGQ C A S ++ ++LVER +AL+V G D D
Sbjct: 239 ADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LEDPD 297
Query: 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECY 415
LGP+IS + +R+ + GAR++ GR I G F+ PT+L DV D
Sbjct: 298 LGPLISAKQLDRVEGFVARARARGARIVAGGR-IAEGAPAGGYFVAPTLLDDVPPDSRLA 356
Query: 416 KEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475
+EEIFGPVL M D EAI + N YG A ++T G A + + AGQV +N
Sbjct: 357 QEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNY 416
Query: 476 IP---VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ LP F G K S G G + YTQ KTV
Sbjct: 417 GAGGGIELP---FGGVKKSGHGREK--GLEALYNYTQTKTVA 453
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 297 bits (762), Expect = 2e-95
Identities = 150/424 (35%), Positives = 229/424 (54%), Gaps = 16/424 (3%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
I+V NPA EV+ +P + EE + A+ A++A N P R ++++K+ ELI R
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-----NVSNGIDTYS 172
++LA +T E GK +K ++ +V R + + + + A + GE +P I ++
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRI-AFT 119
Query: 173 LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
+REP+GV I PFNFPA + A+ GN+ V+KPS P +I LA++ EAGLP
Sbjct: 120 VREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLP 179
Query: 233 DGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
GV+N+V G V + I + + ISF GS G+ I ++A GK+V +G +
Sbjct: 180 PGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM 239
Query: 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAG 349
IVL DA+++ ++ F AGQ C A+ + V + + LVE+ K LKV
Sbjct: 240 IVLKDADLERAVSIAVRGRFENAGQVCNAVKR-ILVEEEVYDKFLKLLVEKVKKLKVGDP 298
Query: 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVT 409
+ DLGP+IS +A ER+ L+ +E G ++L G+ G+F PT+L + T
Sbjct: 299 LDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD------EGSFFPPTVLENDT 352
Query: 410 ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469
DM KEE+FGPVL + EEA++I N +YG A++FT+ A K E+EAG
Sbjct: 353 PDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGG 412
Query: 470 VGIN 473
V IN
Sbjct: 413 VVIN 416
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 2e-91
Identities = 156/468 (33%), Positives = 241/468 (51%), Gaps = 27/468 (5%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
I+VI+P EV+ ++P+ + E+ + A++AAK+ ++ P R ++ + +L+
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP--NVSNGIDT--YSL 173
++ A I E GK +KDA+ +V R +E + S A GE +P G +++
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD 233
REP+GV A I PFNFP + A+ GN VLKP+ + P +++ LAEL +EAGLP
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 234 GVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
G LN+V G+ +TV +A+ D +R ISF GS G I A K+V +G+ I
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAI--ARKAGLKKVTLELGSNAAVI 238
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGT 350
V DA+++ + + F AGQ C+++ + FV + + ++ V K L V
Sbjct: 239 VDADADLEKAVERCVSGAFANAGQVCISVQRI-FVHEDIYDEFLERFVAATKKLVVGDPL 297
Query: 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTA 410
+ D D+GP+IS+ ERI ++ +E GARLL G G + PT+LTDV
Sbjct: 298 DEDTDVGPMISEAEAERIEEWVEEAVEGGARLLT-------GGKRDGAILEPTVLTDVPP 350
Query: 411 DMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQV 470
DM+ EE+F PV+ D+L+EAI + N + YG A +FT+ A K E+E G V
Sbjct: 351 DMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGV 410
Query: 471 GINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF----YTQIKTVT 514
IN + + G K S G G+ G + T+IK V
Sbjct: 411 MINDSSTFRVDHMPYGGVKES--G----TGREGPRYAIEEMTEIKLVC 452
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 282 bits (723), Expect = 1e-89
Identities = 159/465 (34%), Positives = 241/465 (51%), Gaps = 26/465 (5%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
V++PAT E ++ +P + + AAV+AA AFPSWR T R + +LKL + I + ++
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 120 LAMNITTEQGKTLKD-AQGDVFRGLEVVEHSCGMA-TLQ---MGEYVPNVSNGIDTYSLR 174
LA + GK L ++ ++ G A TL+ GEY+P + + R
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHT----SMIRR 116
Query: 175 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDG 234
EP+GV A I P+N+P M+ W A+ GNT VLKPSE P +++LAELA E LP G
Sbjct: 117 EPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPG 175
Query: 235 VLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293
V+N+V G + +A+ +R +S GS G + A+ KRV +G K IV
Sbjct: 176 VVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIV 235
Query: 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTE 351
DA++DA + +A AG+ AGQ C A + V+V +S E LVE A++V +
Sbjct: 236 FDDADLDAAVAGIATAGYYNAGQDCTA-ACRVYVHESVYDEFVAALVEAVSAIRVGDPDD 294
Query: 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD 411
D ++GP+ S +ER+ + + AR+L GR PGY F PT++ V D
Sbjct: 295 EDTEMGPLNSAAQRERVAGFV-ERAPAHARVLTGGRRAEGPGY----FYEPTVVAGVAQD 349
Query: 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVG 471
E +EEIFGPV+ D +EAI++ N +YG ++++T A + ++ G V
Sbjct: 350 DEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVW 409
Query: 472 INVPIPVP--LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+N IP+ +P F S + DL+ Y + YT+IK V
Sbjct: 410 VNTHIPLAAEMPHGGFKQS--GYGKDLSIY---ALEDYTRIKHVM 449
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 283 bits (725), Expect = 2e-89
Identities = 164/481 (34%), Positives = 238/481 (49%), Gaps = 24/481 (4%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQ 103
I F++S E I +NP+T EV++ + E+ AV AA++AF S W R
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG 71
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLK-DAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ KL +L+ ++ D LA + GK +A GD+ + V+ + G A G+ +P
Sbjct: 72 ELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP 131
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
N + Y+L EP GVC I P+N+P + W A+ GNT V+KP+E P + +
Sbjct: 132 TSPNKL-AYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
A L EAG P GV+NI+ G +A+ + ++ I+F GS G + A+ K V
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAV 250
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER- 340
G K+ +V DA++D + AA +GQ C A S + +S DK VE+
Sbjct: 251 TLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYV---QESIYDKFVEKF 307
Query: 341 ----AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
+ KV + + D +GP +SK +R+ I+ G + GA+L+ G G
Sbjct: 308 VEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGG-EKAPEGLGK 366
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
G FI PTI TDV DM KEEIFGPV++ + + EEAIK N YG AA+FT
Sbjct: 367 GYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIR 426
Query: 457 AARKFQTEIEAGQVGINVP----IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512
A + E+EAG V IN + VP F G K S G G+ G+ YTQ K
Sbjct: 427 RAHRVARELEAGMVWINSSNDSDVGVP-----FGGFKMSGIG--RELGEYGLETYTQTKA 479
Query: 513 V 513
V
Sbjct: 480 V 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 2e-89
Identities = 157/462 (33%), Positives = 240/462 (51%), Gaps = 21/462 (4%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
+NPAT E+++++ + E+ AAV+AA+ AF +W R R++ +L ELI + D+
Sbjct: 1 TLNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADE 60
Query: 120 LAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
LA + + GK ++ A+ DV R + + G A GE +P V Y++REP+G
Sbjct: 61 LARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIP-VRGPFLNYTVREPVG 119
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V I P+NFP M W A+ GNT VLKP+E P +++ +AEL EAG P GVLN+
Sbjct: 120 VVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNV 179
Query: 239 VHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297
V G A+ + ++ I+F GS G I A+ KRV +G K+ IV DA
Sbjct: 180 VTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADA 239
Query: 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER----AKALKVNAGTEAD 353
++DA + A A F GQ C A S ++ +S D+ +ER A++L+ +
Sbjct: 240 DLDAAVRAAATGIFYNQGQMCTAGSRLLV---HESIYDEFLERFTSLARSLRPGDPLDPK 296
Query: 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
+GP++S+ +R+ + G E GARLL G+ G+ F+ PTI V +M
Sbjct: 297 TQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGF----FVEPTIFAAVPPEMR 352
Query: 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
+EEIFGPV+ M+ EEA++I N +YG A ++T A + ++AG V IN
Sbjct: 353 IAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWIN 412
Query: 474 V--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
P F G K S G G+ ++ YT++K+V
Sbjct: 413 TYNRFDPGSP---FGGYKQSGFGREM--GREALDEYTEVKSV 449
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 3e-89
Identities = 160/461 (34%), Positives = 243/461 (52%), Gaps = 16/461 (3%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDID 118
+PA VV++ T E+ AAV+AA++AF W R V+LK+ +LIR +
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
+LA+ T E GK + A+G++ ++ ++ +A G+ N+ + + LREP+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V I P+NFP +I P A+ G T V+KPSE G ++MLAEL +EAGLP GV+NI
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 239 VHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297
V G TV A+ + ++ +SF GS G I A A+ K+V +G KN IV DA
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241
Query: 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADAD 355
++DA +A+ + AG+ C + S + V +S ++ +V R++ ++V + +
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSR-LLVHESIADAFVAAVVARSRKVRVGDPLDPETK 300
Query: 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECY 415
+G +I++ +I + +G GA LLL G + G F PTI TDVT DM
Sbjct: 301 VGAIINEAQLAKITDYVDAGRAEGATLLLGGERL---ASAAGLFYQPTIFTDVTPDMAIA 357
Query: 416 KEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475
+EEIFGPVL + D+++EAI + N YG A +++ A I AG V +N
Sbjct: 358 REEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTF 417
Query: 476 IP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ LP F G K S G G+ GV YT++KTV
Sbjct: 418 LDGSPELP---FGGFKQSGIGREL--GRYGVEEYTELKTVH 453
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 279 bits (715), Expect = 2e-88
Identities = 153/467 (32%), Positives = 238/467 (50%), Gaps = 25/467 (5%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
+DV NP EV+ ++P + + A++ A+ + R P R ++ + +L+++
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDT---YSL 173
++ A I E GK +KDA+ +V R ++ + + A GE +P + + G D +++
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD 233
REP+GV I PFNFP + A+ G VLKP+ K P +++ LA++ +EAG+P+
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 234 GVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
GVL +V G +A D + +SF GS G + RA+A GKR+ +G I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEAL--RANAGGKRIALELGGNAPVI 238
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSK-SWEDKLVERAKALKVNAGTE 351
V DA++DA + ALA GF AGQ C+++ + + + + V K LKV +
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD 411
D D+GP+IS++A ER+ R ++ +E+GARLL G G PT+L DV D
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG-------ERDGALFKPTVLEDVPRD 351
Query: 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVG 471
+ EE FGPV+ ++ D EEAI+I N YG A IFT A K ++E G V
Sbjct: 352 TKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVM 411
Query: 472 INVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNF----YTQIKTVT 514
+N + F G K S G+ GV + T+ KTV
Sbjct: 412 VNDSSAFRTDWMPFGGVKES------GVGREGVPYAMEEMTEEKTVV 452
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 278 bits (714), Expect = 2e-88
Identities = 148/439 (33%), Positives = 218/439 (49%), Gaps = 17/439 (3%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFR 141
AV AA AFP+W TP + R+ ++LK +L+ D+ + E G T A +V
Sbjct: 4 QAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDL 63
Query: 142 GLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201
++ + + T +G +P+ G ++EP+GV GI P+N P ++ +
Sbjct: 64 AAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPL 123
Query: 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH----GTHDTVNAICDDANIRA 257
GNT VLK SE P ++ + EAGLP GVLN+V + V A+ +R
Sbjct: 124 AAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRK 183
Query: 258 ISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQ 316
++F GS G I A +AK K V +G K IVL DA++DA NA F +GQ
Sbjct: 184 VNFTGSTRVG-RIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQ 242
Query: 317 RCMALST-VVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375
CM ST + V +S + D+ VE+ KA LG ++S A +R+ L+
Sbjct: 243 ICM--STERIIVHESIA--DEFVEKLKA-AAEKLFAGPVVLGSLVSAAAADRVKELVDDA 297
Query: 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435
+ GA+L++ G P G + PTIL +VT DM+ Y EE FGPV+ ++ EEA
Sbjct: 298 LSKGAKLVVGGLADESPS---GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEA 354
Query: 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGD 495
++I N ++YG AA+FT A A IE+G V IN P G K+S G
Sbjct: 355 VRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYG- 413
Query: 496 LNFYGKAGVNFYTQIKTVT 514
F GK G++ +T+ K +T
Sbjct: 414 -RFNGKWGIDEFTETKWIT 431
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 2e-88
Identities = 149/480 (31%), Positives = 236/480 (49%), Gaps = 19/480 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G F+ S S E + ++PAT EV+ + + A AAK+AF W R+
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN 163
R + K+ +LI + D++A+ + G+ L+ + V R E M
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
V ++ Y++R P+G I P+N P M+ W A+ GNT VLKP+E P + LA
Sbjct: 124 VDTHLN-YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLA 182
Query: 224 ELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282
E+A EAGLPDGV N+VHG + A+ +++A+SF G G I + KR
Sbjct: 183 EIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFS 242
Query: 283 SNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVER 340
+G K+ IV DA+++ L+A+ F G+RC A S+ + V +S + + +KLVER
Sbjct: 243 MELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTA-SSRLLVQESIAEDFVEKLVER 301
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH---G 397
+A++V + + ++GP+I + ++ +++ + GA +L+ G E G
Sbjct: 302 VRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRG 361
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
N++ PT+ T M +EEIFGPVL + EEAI+ N +YG ++T+
Sbjct: 362 NYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGR 421
Query: 458 ARKFQTEIEAGQVGINVP----IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A + +EAG + +N +P P F G KAS G G +FYT+ K V
Sbjct: 422 AHRVALALEAGMIWVNSQNVRHLPTP-----FGGVKAS--GIGREGGTYSFDFYTETKNV 474
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 3e-88
Identities = 159/478 (33%), Positives = 245/478 (51%), Gaps = 13/478 (2%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
R LIGG + ++ + V NPAT EV++ +P E A+++A AFPSW
Sbjct: 24 RTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTA 83
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
+ R +++ + +LI + + LA +T EQGK LK+A G+V G +E+ A G+
Sbjct: 84 SERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGD 143
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
+P+ L++P+GV I P+NFP AMI + P A+ G T V+KPSE P
Sbjct: 144 IIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGP-ALAAGCTVVVKPSELTPLT 202
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAK 277
++ AELA++AG+P GVLN+V G + +A+ +R I+F GS G + A A+A
Sbjct: 203 ALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT 262
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWED 335
KRV +G IV DA++D + A+ F +GQ C+ + + V + + +
Sbjct: 263 VKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVC-ANRILVQEGIYDKFAE 321
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ + L V G E GP+I++ A +++ +Q + GA++LL G+
Sbjct: 322 AFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGK----RHSL 377
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
G F PT+L DVT DM ++EE+FGPV + + EEAI I N + G A IFT
Sbjct: 378 GGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDL 437
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A + +E G VG+N + + F G K S G K G++ Y +IK V
Sbjct: 438 QRAWRVSEALEYGIVGVNEGL-ISTEVAPFGGVKQSGLGREG--SKYGIDEYLEIKYV 492
|
Length = 498 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 278 bits (714), Expect = 6e-88
Identities = 147/447 (32%), Positives = 215/447 (48%), Gaps = 32/447 (7%)
Query: 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT-PIT 100
LI G + ES S + I+V +P EV+ +P + E A A A W T P+
Sbjct: 3 KYLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLE 61
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R + K +L++ + +++A + E GKTLKDA +V R ++ + + G+
Sbjct: 62 ERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDS 121
Query: 161 VP-----NVSNGIDTYSLREPLGVCAGICPFNFP------AMIPLWMFPVAVTCGNTFVL 209
+P I REPLGV I PFN+P +IP A+ GNT V
Sbjct: 122 LPGDWFPGTKGKIAQVR-REPLGVVLAIGPFNYPLNLTVSKLIP------ALIMGNTVVF 174
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGM 268
KP+ + I LAE +AG P GV+N+V G + + + I ISF GS G
Sbjct: 175 KPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGN 234
Query: 269 HIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVG 328
+ + KR+ +G K+ IVLPDA+++ + +GQRC A+ V V
Sbjct: 235 RL--KKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIK-RVLVH 291
Query: 329 DSKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDG 386
+S + E + L E LKV + D+ P+I ++ + + LI + GA +L G
Sbjct: 292 ESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGG 351
Query: 387 RNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGN 446
G E GN I PT+L VT DM EE FGPVL ++ + +EEAI++ NK+ YG
Sbjct: 352 ------GREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGL 405
Query: 447 GAAIFTSSGAAARKFQTEIEAGQVGIN 473
A+IFT ARK +E G V IN
Sbjct: 406 QASIFTKDINKARKLADALEVGTVNIN 432
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 275 bits (704), Expect = 2e-86
Identities = 154/484 (31%), Positives = 251/484 (51%), Gaps = 27/484 (5%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQ 103
I G + +S + +D+ NPAT++V++ + T + AAV++A +AF S W T R
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG 63
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEV------VEHSCGMATLQM 157
R++L+L +LI + ++LA T GK++ + R EV + + G AT
Sbjct: 64 RILLRLADLIEQHGEELAQLETLCSGKSIH-----LSRAFEVGQSANFLRYFAGWATKIN 118
Query: 158 GEYV-PNV-SNGIDTYS---LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212
GE + P++ S + Y+ REP+GV AGI P+NF MI +W A+ G T V+KPS
Sbjct: 119 GETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPS 178
Query: 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYA 272
E P + +AELA EAG+PDGVLN+V+G + ++ +SF GS G I
Sbjct: 179 EFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR 238
Query: 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKS 332
+A++ RV +G KN L DA++D + L AGF GQ C A +V SK
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVC-AAPERFYVHRSKF 297
Query: 333 WE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
E KL + + +V + + GP+ ++ +++C + G ++ G +
Sbjct: 298 DELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALA 357
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GY F+ PT++ +AD +EE FGPV+ + + EE I+++N +G A++
Sbjct: 358 GEGY----FVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASV 413
Query: 451 FTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
+T++ + A ++ IEAG V +N+ + P F G K S G +G A ++ YT++
Sbjct: 414 WTNNLSKALRYIPRIEAGTVWVNMHTFLD-PAVPFGGMKQSGIG--REFGSAFIDDYTEL 470
Query: 511 KTVT 514
K+V
Sbjct: 471 KSVM 474
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 274 bits (702), Expect = 3e-86
Identities = 154/489 (31%), Positives = 225/489 (46%), Gaps = 40/489 (8%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTR 102
IGG ++ SE IDV++PAT+EVV ++P T + AAV+AA++AF + W R
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLK--------------DAQGDVFRGLEVVEH 148
V+ +L + + D+LA T E G + + R E
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 149 SCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFV 208
G G REP+GV A I P+N P + A+ G T V
Sbjct: 123 RPGSG-------------GGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVV 169
Query: 209 LKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGM 268
LKPS + P + +LAE A EAGLP GV+N+V + + + +SF GS AG
Sbjct: 170 LKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGR 229
Query: 269 HIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVG 328
I A + RV +G K+ IVL DA++DA + L A GQ C+AL+ ++ V
Sbjct: 230 RIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRIL-VP 288
Query: 329 DSKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDG 386
S+ E + L ALKV + +GP+ S + +ER+ I G GARL+ G
Sbjct: 289 RSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGG 348
Query: 387 RNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGN 446
G + G F+ PT+ DV DM +EEIFGPVL + D ++A++I N + YG
Sbjct: 349 G--RPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGL 406
Query: 447 GAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAGVN 505
+++T+ I G VG+N P F G K S G G G++
Sbjct: 407 SGSVWTADVERGLAVARRIRTGTVGVNGFRLDFGAP---FGGFKQSGIG--REGGPEGLD 461
Query: 506 FYTQIKTVT 514
Y + K++
Sbjct: 462 AYLETKSIY 470
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 271 bits (696), Expect = 1e-85
Identities = 158/463 (34%), Positives = 227/463 (49%), Gaps = 14/463 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPAT+ + ++P T E+ AAV AA++AFP W+ T R + + + E +R ++
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 120 LAMNITTEQGKTLKDAQ---GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
LA + GK L +A DV E + VP S REP
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
+GV I P+NFP ++ W A+ G T VLKPSE + LAE+A EAGLP GVL
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 237 NIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295
N+V GT D A + I ISF GS G + A+ K V +G K+ IV
Sbjct: 181 NVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240
Query: 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEAD 353
DA+++ + F GQ C A S ++ V +S + ++L A+A++V E
Sbjct: 241 DADLEKAVEWAMFGCFWNNGQICSATSRLL-VHESIADAFLERLATAAEAIRVGDPLEEG 299
Query: 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
LGP++S+ E++ I G E GARLL GR E G FI PT+ DV D
Sbjct: 300 VRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGR--RPAHLEKGYFIAPTVFADVPTDSR 357
Query: 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
++EEIFGPVL + +EAI + N ++YG AA+ + + +EAG V IN
Sbjct: 358 IWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWIN 417
Query: 474 VPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIKTVTQ 515
P P + G K S +L G+ G++ Y ++K +T+
Sbjct: 418 CSQPC-FPQAPWGGYKRSGIGREL---GEWGLDNYLEVKQITR 456
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 271 bits (696), Expect = 2e-85
Identities = 154/471 (32%), Positives = 233/471 (49%), Gaps = 25/471 (5%)
Query: 56 EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELI 113
E INPAT V++++ + AV+AA++AF S W R+ V+L+L +LI
Sbjct: 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLI 61
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL 173
D+LA+ T + GK + DA A ++ V
Sbjct: 62 EAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALIT 121
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD 233
REPLGV + P+NFP ++ W A+ GN+ VLKP+E+ P ++ LAELA+EAGLP
Sbjct: 122 REPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPA 181
Query: 234 GVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHI--YARASAKGKRVQSNMGAKNH 290
GVLN+V G T A+ ++ A++F GS G Y+ + KRV G K+
Sbjct: 182 GVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYS-GQSNLKRVWLECGGKSP 240
Query: 291 GIVLPDA-NMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVN 347
IV DA ++DA A AA F G+ C A S + V +S E +K+V A+ K
Sbjct: 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSR-LLVHESIKDEFLEKVVAAAREWKPG 299
Query: 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTD 407
+ +G ++S+ +++ I+SG GARL+ G+ ++ G F+ PT+
Sbjct: 300 DPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTET--GGFFVEPTVFDG 357
Query: 408 VTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEA 467
VT DM +EEIFGPVL + DS EEA+ + N + YG A+++TS + A + + A
Sbjct: 358 VTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRA 417
Query: 468 GQVGIN----VPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIKTV 513
G V +N I P F G K S D + + ++ YT++KT
Sbjct: 418 GTVWVNCFDEGDITTP-----FGGFKQSGNGRDKSLH---ALDKYTELKTT 460
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 1e-84
Identities = 172/479 (35%), Positives = 242/479 (50%), Gaps = 19/479 (3%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPITT 101
I + +S S + INPAT E + ++ + AV AA+ AF WR +
Sbjct: 11 INNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASE 70
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKT-LKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++ KL +LI RD LA T + GK K D+ ++V+ + G A G+
Sbjct: 71 RGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKT 130
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
+P + TY+ EP+GVC I P+NFP ++ W A+ CGNT VLKP+E+ P ++
Sbjct: 131 IP-MDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTAL 189
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKG- 278
LA L EAG P GV+N+V G T AI +I ++F GS G I +A+ K
Sbjct: 190 YLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLI-QQAAGKSN 248
Query: 279 -KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--D 335
KRV +G K+ IV DA++D + A F GQ C A S FV +S E
Sbjct: 249 LKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSR-TFVQESIYDEFVK 307
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ VERAK V + + GP I ++ ++I LI+SG + GA+L G+ GY
Sbjct: 308 RSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGY- 366
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PT+ +DVT DM KEEIFGPV + +++E I+ N YG AA+FT
Sbjct: 367 ---FIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDI 423
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
A F + AG V +N V P F G K S G+ G+ G+ YT++KTVT
Sbjct: 424 DKAITFSNALRAGTVWVNCYNVVS-PQAPFGGYKMS--GNGRELGEYGLQEYTEVKTVT 479
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 266 bits (681), Expect = 4e-83
Identities = 150/488 (30%), Positives = 229/488 (46%), Gaps = 39/488 (7%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LI G + E V NPAT EV++++ + + AAV+AA AFP W T R
Sbjct: 5 LLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKER 63
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-------DVFR---GLEVVEHSCGM 152
+LKL + I + D+ A + GK L A DVFR G G
Sbjct: 64 AEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAG--AARCLEGK 121
Query: 153 ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212
A GEY+ ++ I R+P+GV A I P+N+P M+ W A+ GNT VLKPS
Sbjct: 122 AA---GEYLEGHTSMIR----RDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPS 174
Query: 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIY 271
E P ++ LAELA + LP GVLN+V G TV +A+ +R +S GS G H+
Sbjct: 175 EITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVL 233
Query: 272 ARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSK 331
+ A+ KR +G K IV DA++DA + + G+ AGQ C A + ++
Sbjct: 234 SAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTA-ACRIYAQRGI 292
Query: 332 SWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGRN 388
+ KL LKV + D +LGP+IS ++R+ ++ G R++ G
Sbjct: 293 YDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEA 352
Query: 389 IVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGA 448
GY + PT+L D E + E+FGPV+ D ++A++ N + YG +
Sbjct: 353 PDGKGY----YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLAS 408
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINVPIPV--PLPFFSFTGSKAS-FAGDLNFYGKAGVN 505
+++T A + ++ G +N + +P G K S + D++ Y G+
Sbjct: 409 SVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMP---HGGQKQSGYGKDMSLY---GLE 462
Query: 506 FYTQIKTV 513
YT ++ V
Sbjct: 463 DYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 9e-83
Identities = 152/458 (33%), Positives = 233/458 (50%), Gaps = 16/458 (3%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
V NPAT E++ +P +E +AA+ AA +AF +WR T R ++ K L+ + D
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
LA IT E GK LK+A+G++ +E A G+ +P+ + +++P+GV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 180 CAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
CA I P+NFP AMI A+ G T V+KP+E+ P +++ LA LA +AG+P GVLN+
Sbjct: 121 CAAITPWNFPAAMITRKAGA-ALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNV 179
Query: 239 VHGTHDTV---NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295
+ G N + +R ISF GS G + ++++ K+V +G IV
Sbjct: 180 ITG-SRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238
Query: 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEAD 353
DA++D + A+ F AGQ C+ + ++V D + KL E K LKV G +
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVC-ANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEG 297
Query: 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
GP+I+++A E++ + I +E GA+++ G+ GNF PT+L++VTADM
Sbjct: 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKR----HELGGNFFEPTVLSNVTADML 353
Query: 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
KEE FGP+ + D EE I I N + G A F+ + + +E G VGIN
Sbjct: 354 VSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGIN 413
Query: 474 VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
+ F G K S G K G+ Y + K
Sbjct: 414 TGLISN-VVAPFGGVKQSGLGREG--SKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 1e-82
Identities = 130/416 (31%), Positives = 213/416 (51%), Gaps = 6/416 (1%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
I+P V+++ PL + E +AA+ A+ A WR P+ R+ ++ + EL+ + D++
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
A +T + G+ + A G++ LE + +A + + +G + Y REPLGV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240
I P+N+P + + A+ GN +LK S + P A EAGLP+GV ++H
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 241 GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGIVLPDANM 299
+H+T A+ D I +SF GS VAG RA+A +V +G K+ V PDA++
Sbjct: 181 LSHETSAALIADPRIDHVSFTGS-VAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239
Query: 300 DATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLG 357
DA +L F +GQ C ++ ++V +S ++ + V K K+ + LG
Sbjct: 240 DAAAESLVDGAFFNSGQSCCSIER-IYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLG 298
Query: 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKE 417
PV+S +A + + I I GAR L+DG G ++ PT+LT+V M +E
Sbjct: 299 PVVSARAADFVRAQIADAIAKGARALIDGALFPEDK-AGGAYLAPTVLTNVDHSMRVMRE 357
Query: 418 EIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
E FGPV+ M+ S EAI ++N ++YG A+++T A A ++E G V +N
Sbjct: 358 ETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMN 413
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 265 bits (678), Expect = 1e-82
Identities = 167/482 (34%), Positives = 243/482 (50%), Gaps = 28/482 (5%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SW-RNTPITTR 102
I G F++S + V NP+T ++++++ T + AV A AF W + R
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKR 70
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYV 161
R + KL +L+ R++D LA + GKT A+ DV + + G A G+ +
Sbjct: 71 GRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI 130
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ TY+ EP+GVC I P+NFP ++ W A+ GNT VLKPSE P +++
Sbjct: 131 ETDIKKL-TYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAG-MHIYARASAKGK 279
+ +L EAG P GV+N+V G T NAI +I ++F GS + G + A A + K
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLV 338
+V +G K+ IV DA++++ + A F GQ C A S + V G + +
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
E+AK LKV D GP +S+ ERI I+SG GA + G+ HGN
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGK-------RHGN 362
Query: 399 ---FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
FI PTI TDVT DM+ KEEIFGPV+ ++ + EEAIK N + YG AA+FT++
Sbjct: 363 EGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNI 422
Query: 456 AAARKFQTEIEAGQVGIN----VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
A + ++AG V +N + VP F G K S G G+ + YTQIK
Sbjct: 423 NNAIRVANALKAGTVWVNCYNLLHHQVP-----FGGYKQSGIG--RELGEYALENYTQIK 475
Query: 512 TV 513
V
Sbjct: 476 AV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 263 bits (675), Expect = 3e-82
Identities = 156/475 (32%), Positives = 235/475 (49%), Gaps = 16/475 (3%)
Query: 47 GAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVM 106
G + + S IDV+NP T E ++++P + E+ A AA A W T R ++
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 107 LKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSN 166
K +++ D++ + E G T A + + + + G +P+
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 167 GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP-GASIMLAEL 225
G + REPLGV I P+NFP + + A+ GN VLKP+ P ++LA++
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI 180
Query: 226 AMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSN 284
EAGLP GVLN+V G + +A + R ISF GS G HI A K+V
Sbjct: 181 FEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240
Query: 285 MGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAK 342
+G N +VL DA++DA +NA F GQ CMA++ ++ V + + +K VER K
Sbjct: 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRII-VHEDVYDEFVEKFVERVK 299
Query: 343 ALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGP 402
AL ++ D +GP+I++ + + I+ +E GA LL+ G GN + P
Sbjct: 300 ALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGE-------AEGNVLEP 352
Query: 403 TILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ 462
T+L+DVT DME +EEIFGPV ++AD EEA+++ N +YG A+FTS +F
Sbjct: 353 TVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFA 412
Query: 463 TEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516
I+AG IN PV P F G K S G N G+ + +T K ++ Q
Sbjct: 413 RRIDAGMTHIN-DQPVNDEPHVPFGGEKNSGLGRFN--GEWALEEFTTDKWISVQ 464
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 6e-82
Identities = 148/418 (35%), Positives = 219/418 (52%), Gaps = 7/418 (1%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPAT +V++++P + + AV+AA+ AFP WR T R R++ +L +R ++
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGV 179
LA+ + G + GDV ++++ G+ T GE +P + Y+LREP GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLH-YTLREPYGV 119
Query: 180 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239
A I FN P M + GNT V+KP E+ P +++ LAELA E LP GV NI+
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNIL 178
Query: 240 HGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDAN 298
G T A+ +++ I+ +GS G I A+ K V +G KN IV PDA+
Sbjct: 179 PGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238
Query: 299 MDATLNALAAA-GFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEADAD 355
+A +A A F GQ C + S + FV +S E ++VER A+KV T+
Sbjct: 239 PEAAADAAVAGMNFTWCGQSCGSTSRL-FVHESIYDEVLARVVERVAAIKVGDPTDPATT 297
Query: 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECY 415
+GP++S+Q +R+ I S GARL+ G P E G ++ PT+ DVT M
Sbjct: 298 MGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIA 357
Query: 416 KEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
+EEIFGPVL ++ E + N +YG AAI+T+ + A + +EAG V IN
Sbjct: 358 REEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWIN 415
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 5e-81
Identities = 135/400 (33%), Positives = 198/400 (49%), Gaps = 20/400 (5%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFR 141
AA+ A AF +WR T R ++ KL +L+R D+LA IT E GK + +A+ +V +
Sbjct: 3 AALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEK 62
Query: 142 GLEVVEHSC--GMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW-MFP 198
+ + A L E + ++ Y EPLGV GI P+NFP W +F
Sbjct: 63 CAWICRYYAENAEAFLA-DEPIE--TDAGKAYVRYEPLGVVLGIMPWNFP----FWQVFR 115
Query: 199 VAV---TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANI 255
A GNT +LK + PG ++ + EL EAG P+GV + D V AI D +
Sbjct: 116 FAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPRV 175
Query: 256 RAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315
R ++ GS AG + A A K+ +G + IVL DA++D + AG
Sbjct: 176 RGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAG 235
Query: 316 QRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQ 373
Q C+A + V + + +K VE ALKV + D DLGP+ K ++ + ++
Sbjct: 236 QSCIA-AKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVE 294
Query: 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433
+ +GA LLL G+ PG F PT+LTDVT M Y EE+FGPV ++ E
Sbjct: 295 EAVAAGATLLLGGKRPDGPGA----FYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEE 350
Query: 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
EAI + N + +G G ++FT+ A + +EAG V IN
Sbjct: 351 EAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFIN 390
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 1e-80
Identities = 147/461 (31%), Positives = 234/461 (50%), Gaps = 11/461 (2%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119
VINPAT +V+ ++P + + AV+AAK AFP W TP R +++ ++ + + ++
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 120 LAMNITTEQGKTLK-DAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
LA + E G L+ A+ + ++ + G+A GE +P + + TY++REPLG
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVL-TYTVREPLG 119
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V I P+N P M+ A+ GNT VLK +E P A ++LAE+ + LP GVLN+
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNV 178
Query: 239 VHGTHDTVN-AICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297
+ G + A+ D ++ ++F GS G IY A+ + V +G K+ IV PDA
Sbjct: 179 ITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238
Query: 298 NMDATLN-ALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADA 354
++D ++ A+A F GQ C A S + FV + ++ +KLV + LK+ +
Sbjct: 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRL-FVHEDIYDAFLEKLVAKLSKLKIGDPLDEAT 297
Query: 355 DLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
D+G +IS++ ++C I G+ SGA +L G G F+ PTI + V +
Sbjct: 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWR 357
Query: 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
+EEIFGPVL + +E I + N + YG A ++T A + +EAG V +N
Sbjct: 358 LAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVN 417
Query: 474 VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
P S+ G K S G + + +TQ KTV
Sbjct: 418 QGG-GQQPGQSYGGFKQSGLGR-EASLEGMLEHFTQKKTVN 456
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 258 bits (661), Expect = 3e-80
Identities = 147/469 (31%), Positives = 227/469 (48%), Gaps = 27/469 (5%)
Query: 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSW-RNTPITTRQRVMLKLQELIRRDID 118
VINPAT+EV+ P + AA++AA++AF + +T R R + +L E + +
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 119 KLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL---- 173
+L + E G + A+ V + + + +A E+ V
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVR 120
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD 233
REP+GV A I P+NFP + L A+ GNT VLKP+ P ++++L E+ E LP
Sbjct: 121 REPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPA 180
Query: 234 GVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
GV+N+V G+ + A+ D + +SF GS G I A+A+A KRV +G K+ I
Sbjct: 181 GVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKA----LKVNA 348
VL DA++ A A AGQ C AL+T + V S+ D++VE A L V
Sbjct: 241 VLDDADLAAAAPAAVGVCMHNAGQGC-ALTTRLLVPRSR--YDEVVEALAAAFEALPVGD 297
Query: 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDV 408
+ +GP+IS ++R+ I G + GARL+ G G + G ++ PT+ DV
Sbjct: 298 PADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGR--PAGLDKGFYVEPTLFADV 355
Query: 409 TADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468
DM +EEIFGPVL+ + D +EA++I N + YG ++++ A + I G
Sbjct: 356 DNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTG 415
Query: 469 QVGINVPIPVPLPFFS----FTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
VGIN + F G K S G G G+ + + K++
Sbjct: 416 SVGIN-----GGGGYGPDAPFGGYKQSGLG--RENGIEGLEEFLETKSI 457
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 257 bits (660), Expect = 3e-80
Identities = 142/427 (33%), Positives = 218/427 (51%), Gaps = 21/427 (4%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
++V NP T EVV+++ L ++ + A++AA +AF R P R ++L +
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP--NVSNGIDTYSL-- 173
++LA I E GK +KDA+G+V R ++ + AT GE +P + G L
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPV--AVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
R P+G + I PFNFP + L V A+ G FVLKP+ + P ++++L E+ E GL
Sbjct: 121 RFPIGPVSAITPFNFP--LNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGL 178
Query: 232 PDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
P G +++ + D + + D I+ +SF GS G + ARA K +V +G
Sbjct: 179 PKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAV 236
Query: 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAG 349
IV DA++D + F AGQ C+++ V V S ++ +LV R KALK
Sbjct: 237 IVDSDADLDFAAQRIIFGAFYQAGQSCISVQRV-LVHRSVYDEFKSRLVARVKALKTGDP 295
Query: 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVT 409
+ D+GP+IS+ ER+ + +++GA+LL G G + PTIL DV
Sbjct: 296 KDDATDVGPMISESEAERVEGWVNEAVDAGAKLL-------TGGKRDGALLEPTILEDVP 348
Query: 410 ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469
DME EE+FGPV+ D +EA+ VN +++G A +FT A + E+E G
Sbjct: 349 PDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGG 408
Query: 470 VGIN-VP 475
V IN VP
Sbjct: 409 VVINDVP 415
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 256 bits (657), Expect = 8e-80
Identities = 147/464 (31%), Positives = 226/464 (48%), Gaps = 22/464 (4%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
NPAT EV+ ++P+T E AAV+ A+ A +W + R + +L+ + + D+L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA-------TLQMGEYVPNVSNGIDTYSL 173
A + E GK DA +V LE ++ + A + G +PN ++
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVE---- 116
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD 233
P GV I P+N+P + P+ A+ GN VLKPSE P +LAE AG P
Sbjct: 117 YRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQ 176
Query: 234 GVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293
GVL +V G T A+ D A + ++F GS G + A A+ + V +G K+ IV
Sbjct: 177 GVLQVVTGDGATGAALID-AGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235
Query: 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTE 351
L DA+++ A AGQ C+++ V+V +S + +LV +A+AL+ A
Sbjct: 236 LADADLERAAAAAVWGAMVNAGQTCISVE-RVYVHESVYDEFVARLVAKARALRPGADDI 294
Query: 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD 411
DAD+GP+ + + + + R + + GA+ L G G F PT+LTDV D
Sbjct: 295 GDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNG----GGPFYEPTVLTDVPHD 350
Query: 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVG 471
M+ +EE FGPVL M +EAI + N ++YG A++F+ A A +EAG V
Sbjct: 351 MDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS 410
Query: 472 IN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
IN V + +P F G K S G +G G+ + + K +
Sbjct: 411 INDVLLTAGIPALPFGGVKDSGGG--RRHGAEGLREFCRPKAIA 452
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 8e-78
Identities = 160/498 (32%), Positives = 244/498 (48%), Gaps = 43/498 (8%)
Query: 42 PNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P +IGG I + + I INPA EVV ++ T E + A+ AA +AF +W+
Sbjct: 38 PLIIGGERITTE--DKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPE 95
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++L+ +IRR + + + E GK +A D ++ +E+ L++ +
Sbjct: 96 DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYY-ARQMLKLADG 154
Query: 161 VPNVS-NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
P S G PLGV I P+NFP I M A+ GNT +LKP+ P +
Sbjct: 155 KPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIA 214
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS--A 276
E+ EAGLP GV+N V G+ V + + D R I+F GS G+ IY RA+
Sbjct: 215 AKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQ 274
Query: 277 KG----KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKS 332
G KRV + MG K+ +V DA++D ++ A+ FG +GQ+C A S + V +
Sbjct: 275 PGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAI-VHEDVY 333
Query: 333 WE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
E +K+VE K L V E +A +GPVI++ + ++I I+ G E G RL+L G
Sbjct: 334 DEVLEKVVELTKELTV-GNPEDNAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDD 391
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GY FI PTI DV +EEIFGPV+ ++A + A++I N +YG A+
Sbjct: 392 SKGY----FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAV 447
Query: 451 FTSSGAAARKFQTEIEAGQVGINVPIPVPL----PF--FSFTGSKASFAGDLNFYGKAG- 503
+++ K + E G + N + PF F+ +G+ + KAG
Sbjct: 448 ISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS----------KAGG 497
Query: 504 ----VNFYTQIKTVTQQW 517
+ F Q KTV++ +
Sbjct: 498 PDYLLLF-LQAKTVSEMF 514
|
Length = 514 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 2e-77
Identities = 141/450 (31%), Positives = 210/450 (46%), Gaps = 11/450 (2%)
Query: 67 EVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITT 126
V+ ++ + + A + A A +W TP R V+ + +L+ D++A I
Sbjct: 2 AVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVR 61
Query: 127 EQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPF 186
E G A +V + + + G+ T GE +P+ + G + + R PLGV I PF
Sbjct: 62 ESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPF 120
Query: 187 NFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHGTHDT 245
NFP ++ + A+ GN VLKP + P + +++A L EAGLP GVL+++ G D
Sbjct: 121 NFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADA 180
Query: 246 VNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNA 305
A+ +D N+ ISF GS G + A K+V +G KN IVL DA++D +
Sbjct: 181 GEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASN 240
Query: 306 LAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQA 364
A F GQ CMA V + ++ KL +AK L V LGP+I+ +
Sbjct: 241 GAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQ 300
Query: 365 KERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424
+R+ ++ + +GARL G Y+ G F PT+L+ V M + EEIFGPV
Sbjct: 301 LDRVHAIVDDSVAAGARLEAGGT------YD-GLFYRPTVLSGVKPGMPAFDEEIFGPVA 353
Query: 425 LCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFS 484
DS EEA+ + N +YG A I + A + G + IN P
Sbjct: 354 PVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNP 413
Query: 485 FTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
F G AS G F G A +TQ + VT
Sbjct: 414 FGGMGASGNGS-RFGGPANWEEFTQWQWVT 442
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 247 bits (633), Expect = 4e-76
Identities = 163/480 (33%), Positives = 241/480 (50%), Gaps = 22/480 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITT 101
I G F+++ S + I+P EV++ + E+ AV AA++AF W
Sbjct: 7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYE 66
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEY 160
R R++L+ +L+ + D+LA T + GK + A +V + + G A G
Sbjct: 67 RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMT 126
Query: 161 VPNVSNGI-DTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P ++G Y+L EP+GV I P+NFP ++ W A+ CGNT VLKP+E+ P ++
Sbjct: 127 LP--ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSA 184
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG 278
++ A+LA EAGLPDGVLNIV G T A I ++ ++F GS G I A+
Sbjct: 185 LLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSN 244
Query: 279 -KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKL 337
K V +G K+ IV DA++D + A F GQ C A S FV +S D+
Sbjct: 245 LKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSR-TFV--HESIYDEF 301
Query: 338 VERAK--ALKVNAGTEAD--ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
VE+AK ALK G + GP + K+ E+I I+ G E GA L+ G I G
Sbjct: 302 VEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG 361
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
Y +I PTI +DV DM+ ++EIFGPV ++ +++E IK N ++YG A +F+
Sbjct: 362 Y----YIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSK 417
Query: 454 SGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
+ A ++AG V +N V F G K S G G +N Y Q+K V
Sbjct: 418 NIDTANTLSRALKAGTVWVNC-YDVFDASIPFGGYKMSGIGREK--GIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 238 bits (608), Expect = 2e-72
Identities = 145/497 (29%), Positives = 224/497 (45%), Gaps = 53/497 (10%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
N I G ++ EY D NP +V+ ++P +T E+ AV AA +AF +W T + R
Sbjct: 3 NFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAER 62
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-------DVFRGLEVVEHSCGMATL 155
++ K+ + I +++ LA+ T + GK +++ D FR + G+
Sbjct: 63 ANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFR------YFAGVIRA 116
Query: 156 QMGEYVPNVSNGID----TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211
Q G + ID +Y EPLGV I P+NFP ++ W A+ GNT VLKP
Sbjct: 117 QEGS-----LSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKP 171
Query: 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHI 270
+ + P + ++L EL + LP GV+N+V G + I ++F GS G I
Sbjct: 172 ASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLI 230
Query: 271 YARASAKGKRVQSNMGAKNHGIVLPDANM--DATLNALAAAGFGAA---GQRCMALSTVV 325
A+ V +G K+ I DA D + G A G+ C S
Sbjct: 231 MQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRA- 289
Query: 326 FVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
V +S + ++ VER +A+KV + + +G +SK E+I + G E GA +L
Sbjct: 290 LVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVL 349
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G + + G + G F PT++ DM ++EEIFGPVL + EEAI I N +
Sbjct: 350 TGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTE 409
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG 503
YG G ++T A + I+ G+V +N P + A F G Y K+G
Sbjct: 410 YGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYP--------AHAPFGG----YKKSG 457
Query: 504 V---------NFYTQIK 511
+ + Y Q K
Sbjct: 458 IGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 4e-72
Identities = 94/270 (34%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 86 AAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEV 145
AA+ AF +W P R ++ K+ +L+ ++LA T E GK +++A G+V R ++
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 146 VEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 205
++ G+A G +P+ G + Y REPLGV I P+NFP ++ W A+ GN
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 206 TFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSN 264
T VLKPSE P ++ LAEL EAGLP GV+N+V G D V A+ + ISF GS
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 265 VAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV 324
G I A+ K V +G K+ IV DA++DA + F AGQ C A S +
Sbjct: 182 AVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241
Query: 325 VFVGDSKSWEDKLVERAKALKVNAGTEADA 354
+ D+ VE+ + V+ +
Sbjct: 242 LVHESIY---DEFVEKLVTVLVDVDPDMPI 268
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 2e-71
Identities = 149/482 (30%), Positives = 241/482 (50%), Gaps = 26/482 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G +++ S E ID NPA E +S++ T+ + AV AA++AF +WR T + R
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVP 162
++ K+ ++I + + LAM T + GK +++ + D+ + + G+ + G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS--- 120
Query: 163 NVSNGID--TYS--LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
+N ID T S LREP+GV I P+NFP ++ W A+ GNT V+KPS +
Sbjct: 121 --ANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLS 178
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAK 277
+ LA++ + LP GV+NIV G + + + ++F GS G + A A+AK
Sbjct: 179 LLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDV-AIAAAK 236
Query: 278 GKRVQSNM--GAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSW 333
K + + + G K+ I+ DAN D L GQ C A S + FV + +
Sbjct: 237 -KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRI-FVQEGIYDEF 294
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
KL E+ + +KV + D +G ++K ++I + E GA++L G + G
Sbjct: 295 VAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENG 354
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
+ G FI PT++ +VT DM +EEIFGPV ++ + +E I + N ++YG G +FT
Sbjct: 355 LDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTK 414
Query: 454 SGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
A + +E G+V +N IP P F G K S G K+ ++ YTQ+K
Sbjct: 415 DINRALRVARAVETGRVWVNTYNQIPAGAP---FGGYKKSGIGRETH--KSMLDAYTQMK 469
Query: 512 TV 513
+
Sbjct: 470 NI 471
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 232 bits (594), Expect = 4e-70
Identities = 160/484 (33%), Positives = 242/484 (50%), Gaps = 16/484 (3%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTR 102
I G F+++ S + + +P T EV++++ E+ AV AA++AF W R
Sbjct: 25 INGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFER 84
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYV 161
R+M+K +LI I++LA T + GK + D+ ++ + G A GE
Sbjct: 85 GRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGE-T 143
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+S + Y+L+EP+GV I P+NFP+ + A+ G T V+KP+E+ P +++
Sbjct: 144 LKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALF 203
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVN-AICDDANIRAISFVGSNVAGMHIY-ARASAKGK 279
A LA AG+PDGV+N+V G T AI ++ +SF GS G I A A++ K
Sbjct: 204 YAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLK 263
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLV 338
+V +G K+ ++ DA++D ++ F G+ C+A S V V G + KLV
Sbjct: 264 QVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLV 323
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
E+AK V + A GP + KQ E+I I+ G GA LL G+ P + G
Sbjct: 324 EKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGK----PCGDKGY 379
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
+I PTI TDVT DM+ ++EIFGPV+ M+ ++EEAIK N +YG A I T A
Sbjct: 380 YIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVA 439
Query: 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIKTVTQQW 517
I AG + +N P F G K S F D G ++ Y Q+K+V
Sbjct: 440 NTVSRSIRAGTIWVNCYFAFD-PDCPFGGYKMSGFGRDQ---GMDALDKYLQVKSVVTPL 495
Query: 518 RDLP 521
+ P
Sbjct: 496 YNSP 499
|
Length = 501 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 229 bits (585), Expect = 2e-69
Identities = 129/412 (31%), Positives = 187/412 (45%), Gaps = 20/412 (4%)
Query: 81 KAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVF 140
AAV+AA+ AFP W + R ++ + EL++ + ++LA I+ E GK L +AQ +V
Sbjct: 3 DAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEV- 61
Query: 141 RGLEVVEHSCGMATLQMGEYVPNVSNGID--TYSLR-EPLGVCAGICPFNFPAMIPLWMF 197
+ ++ E + + LR P GV A PFNFP +P
Sbjct: 62 ---AAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHI 118
Query: 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRA 257
A+ GNT V KPSE P + ++ EL EAGLP GVLN+V G +T A+ I
Sbjct: 119 VPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDG 178
Query: 258 ISFVGSNVAGMHIYARASAK--GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315
+ F GS G + R A GK + MG N +V A++DA + + F AG
Sbjct: 179 LLFTGSAATG-LLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAG 237
Query: 316 QRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQ 373
QRC ++ + ++LVE AK L++ A +GP+I A R Q
Sbjct: 238 QRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQ 297
Query: 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433
+ G LL +V F+ P I+ DVT + EEIFGP+L + D +
Sbjct: 298 DLLALGGEPLLAMERLV----AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFD 352
Query: 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI---PVPLPF 482
EAI + N ++G A + + A +F I AG V N P PF
Sbjct: 353 EAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPF 404
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 6e-69
Identities = 143/465 (30%), Positives = 225/465 (48%), Gaps = 21/465 (4%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRRDID 118
I+PAT EV+ E +AA++AA++AF W + P R RV+L+L + + +
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHDP-RLRARVLLELADAFEANAE 60
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA---TLQMGEYVPNVSNGIDTYS--L 173
+LA + E GK L +A+ ++ + + + G+A +M E P ++S L
Sbjct: 61 RLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPEP------GSFSLVL 114
Query: 174 REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEA-GLP 232
REP+GV I P+N P ++ + A+ G T V+KP+ + + + + E LP
Sbjct: 115 REPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLP 174
Query: 233 DGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
GV+N+ + + ++ ISF GS G I A A+ KR+ +G K
Sbjct: 175 AGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPC 234
Query: 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLVERAKALKVNAGT 350
IV DA++DA L L A AGQ CMA S V V + D+L R A+KV G
Sbjct: 235 IVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGL 294
Query: 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTA 410
+ +D+GP+I + +R+ R+++ I +GA ++L G V G G F+ PT+L
Sbjct: 295 DPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGP-VTEGLAKGAFLRPTLLEVDDP 353
Query: 411 DMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQV 470
D + +EEIFGPVL D EA+ + N YG A+++T A A + I AG V
Sbjct: 354 DADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTV 413
Query: 471 GINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515
IN + G + S G L+ G A + + + K +
Sbjct: 414 WINDWNKL-FAEAEEGGYRQSGLGRLH--GVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 2e-68
Identities = 153/517 (29%), Positives = 232/517 (44%), Gaps = 40/517 (7%)
Query: 20 QIFAKFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNE 78
Q F K K + P +I G +E+ + I INP EVV + + E
Sbjct: 16 QAFFKALATVKEQLGKTYPL----VINGERVETEN--KIVSINPCDKSEVVGTVSKASQE 69
Query: 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD 138
+ A+ AA +AF +W+ T R ++ K ++RR + + + E GK +A +
Sbjct: 70 HAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAE 129
Query: 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198
V ++ +E+ N G + P GV I P+NFP I + M
Sbjct: 130 VAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVTVVISPWNFPFAIMVGMTV 189
Query: 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNA-ICDDANIRA 257
+ GN VLKP+E P + E+ EAGLP GV+ V G+ V + D
Sbjct: 190 APIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVPGSGSEVGDYLVDHPKTSL 249
Query: 258 ISFVGSNVAGMHIYARASAKG------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGF 311
I+F GS G I+ RA+ KRV + MG K+ IV DA+++ + + F
Sbjct: 250 ITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAF 309
Query: 312 GAAGQRCMALSTVVFVGDSKSWE---DKLVERAKALKVNAGTEADADLGPVISKQAKERI 368
G AGQ+C A S V K ++ ++ VE ++LKV AD +GPVI +++ +I
Sbjct: 310 GFAGQKCSAGSRAVVH--EKVYDEVVERFVEITESLKVGPPDSADVYVGPVIDQKSFNKI 367
Query: 369 CRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428
I+ G G RL+ G GY FIGPTI DV +EEIFGPV+ ++
Sbjct: 368 MEYIEIGKAEG-RLVSGGCGDDSKGY----FIGPTIFADVDRKARLAQEEIFGPVVAFIR 422
Query: 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPL----PFFS 484
A +EA++I N +YG + +++ + + E E G + N I + PF
Sbjct: 423 ASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGG 482
Query: 485 F----TGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
F T SKA G + + Q KTVT+ +
Sbjct: 483 FKMSGTDSKAG--------GPDYLALFMQAKTVTEMF 511
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 3e-68
Identities = 164/503 (32%), Positives = 243/503 (48%), Gaps = 29/503 (5%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP----- 92
PR IGG + E + I V+NPAT+E + +P T E+ AAV AA++AF
Sbjct: 5 VPRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGK 64
Query: 93 SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGM 152
W T R + + + I +LA T + GK L +A D+ E+ +
Sbjct: 65 DWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADL 124
Query: 153 A-TLQMGEYVPNVSNGIDT---YSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFV 208
A L + P VS ++T Y L+EPLGV I P+N+P ++ W A+ G T V
Sbjct: 125 AEALDAKQKAP-VSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAV 183
Query: 209 LKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAG 267
LKPSE + LA++ E GLP GVLN+V G + + + I+F GS G
Sbjct: 184 LKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATG 243
Query: 268 MHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGA---AGQRCMALSTV 324
I A+ K V +G K+ IV D ++D A+ A FG GQ C A S +
Sbjct: 244 RKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLD---KAVEWAMFGCFWTNGQICSATSRL 300
Query: 325 -VFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
V + + +KLV+ AK +K++ E LGPV+S+ E++ + I + GA +L
Sbjct: 301 LVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATIL 360
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G+ + G FI PTI+TDVT M+ ++EE+FGPVL + +EAI++ N +
Sbjct: 361 CGGKR--PEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSH 418
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKAS-FAGDLNFYG 500
YG A+ ++ + +AG V IN P P + G K S F +L G
Sbjct: 419 YGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAP---WGGIKRSGFGREL---G 472
Query: 501 KAGVNFYTQIKTVTQQWRDLPGG 523
+ G+ Y +K VT+ D P G
Sbjct: 473 EWGLENYLSVKQVTKYISDEPWG 495
|
Length = 503 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 227 bits (580), Expect = 3e-68
Identities = 144/491 (29%), Positives = 239/491 (48%), Gaps = 26/491 (5%)
Query: 40 RVPN--LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WR 95
++P+ I G F+++ + + INP V+ ++ L T E+ AV+AAK+AF + W
Sbjct: 3 KMPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWG 62
Query: 96 NTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMAT 154
R R+M +L +L+ ++LA + + G A + V ++ + G
Sbjct: 63 KMNARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCD 122
Query: 155 LQMGEYVP-NVS--NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211
G+ +P N + N T + REP+GVC + P+N+P M+ W + GNT VLKP
Sbjct: 123 KIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKP 182
Query: 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHI 270
++ P ++ AEL ++AG P GV+NI+ G+ V + D ++R + F GS G HI
Sbjct: 183 AQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHI 242
Query: 271 YARASAKG-KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD 329
+ K+V +G K+ I+ D +MD + ++ F G+ C+A +FV +
Sbjct: 243 MKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGR-LFVEE 301
Query: 330 SKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGR 387
S E ++VE K +K+ + D GP K +++ + G++ GA L+ G+
Sbjct: 302 SIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGK 361
Query: 388 NIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLC--MQADSLEEAIKIVNKNQYG 445
+ PG+ F PT+ TDV M KEE FGP+++ ++ ++ N +YG
Sbjct: 362 QVDRPGF----FFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYG 417
Query: 446 NGAAIFTSSGAAARKFQTEIEAGQVGINV--PIPVPLPFFSFTGSKASFAGDLNFYGKAG 503
+ +FT A ++EAG V +N V PF F S F DL G+
Sbjct: 418 LASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQS--GFGKDL---GEEA 472
Query: 504 VNFYTQIKTVT 514
+N Y + KTVT
Sbjct: 473 LNEYLKTKTVT 483
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 9e-68
Identities = 147/474 (31%), Positives = 220/474 (46%), Gaps = 41/474 (8%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ---RVMLKLQELIR 114
++V NP T EVV +P T E A+ A S+R+T TR ++ K L+
Sbjct: 1 LEVRNPYTGEVVGTVPAGTEE----ALREALALAASYRST--LTRYQRSAILNKAAALLE 54
Query: 115 RDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDT--- 170
++ A IT E G LKD + +V R +V+ + A GE +++
Sbjct: 55 ARREEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKI 114
Query: 171 YSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230
++LREPLGV I PFN P A+ N VLKPSEK P ++I LA+L EAG
Sbjct: 115 FTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAG 174
Query: 231 LPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKN 289
LP +L++V G + + + ++ ++F G G I A+A KR +G +
Sbjct: 175 LPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAI--AATAGYKRQLLELGGND 232
Query: 290 HGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVN 347
IV+ DA+++ A + +GQRC A+ + V +S + E D LVE++ AL V
Sbjct: 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRI-LVHESVADEFVDLLVEKSAALVVG 291
Query: 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTD 407
+ D+G VI ++A +I ++ I GAR+LL + G PT+L
Sbjct: 292 DPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQ-------RQGALYAPTVLDH 344
Query: 408 VTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEA 467
V D E EE FGPV ++ L+EAI I N YG + + T+ ++ ++
Sbjct: 345 VPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDV 404
Query: 468 GQVGINVPIPVP---LPFFSFTGSKASFAGDLNFYGKAGV----NFYTQIKTVT 514
G V +N VP F G K S G GK GV T +KT +
Sbjct: 405 GTVNVN---EVPGFRSELSPFGGVKDSGLG-----GKEGVREAMKEMTNVKTYS 450
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 226 bits (579), Expect = 2e-67
Identities = 166/533 (31%), Positives = 254/533 (47%), Gaps = 38/533 (7%)
Query: 1 MLTRLASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNPPRVPN----LIGGAFIESRSSE 56
+ +++ R R R + +FST A + PP + LI G F+++ S +
Sbjct: 14 LSASSSALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLLINGQFVDAASGK 73
Query: 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIR 114
++P T EV++ + E+ AV+AA++AF W R R++L+ +L+
Sbjct: 74 TFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLE 133
Query: 115 RDIDKLAMNITTEQGKTLKD-AQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGI-DTYS 172
+ D+LA T + GK + A+ ++ + + G A G VP ++G +
Sbjct: 134 KHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVP--ADGPHHVQT 191
Query: 173 LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
L EP+GV I P+NFP ++ W A+ CGNT VLK +E+ P +++ A+L EAGLP
Sbjct: 192 LHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLP 251
Query: 233 DGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNH 290
GVLN+V G T A + ++ ++F GS G + A+ K V +G K+
Sbjct: 252 PGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSP 311
Query: 291 GIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAK--ALKVNA 348
IV DA++D + A F GQ C A S FV + D+ VE+AK ALK
Sbjct: 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSR-TFVHERVY--DEFVEKAKARALKRVV 368
Query: 349 GT--EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT 406
G + + GP I + E+I R I+SG+ESGA L G GY +I PT+ +
Sbjct: 369 GDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGY----YIQPTVFS 424
Query: 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE 466
+V DM ++EIFGPV ++ L+E I+ N +YG A +FT + A +
Sbjct: 425 NVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALR 484
Query: 467 AGQVGIN------VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
G V +N IP F G K S G G +N Y Q+K V
Sbjct: 485 VGTVWVNCFDVFDAAIP-------FGGYKMSGIGREK--GIYSLNNYLQVKAV 528
|
Length = 538 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 219 bits (559), Expect = 4e-65
Identities = 141/438 (32%), Positives = 225/438 (51%), Gaps = 16/438 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
I G + + +E + ++P TQ ++++ + + AVSAA+ F W +
Sbjct: 23 FINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAK 82
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEY 160
R+ V+ KL +L+ ++LA+ T + GK ++ + + D+ + GE
Sbjct: 83 RKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEV 142
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
S+ + +REP+GV A I P+NFP ++ W A+ GN+ +LKPSEK P ++I
Sbjct: 143 ATTSSHEL-AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAI 201
Query: 221 MLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA-SAKG 278
LA LA EAGLPDGVLN+V G H+ A+ +I AI+F GS G + A +
Sbjct: 202 RLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNM 261
Query: 279 KRVQSNMGAKNHGIVLPDA-NMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--D 335
KRV G K+ IV D ++ +A AA F GQ C+A T + + +S + E
Sbjct: 262 KRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIA-GTRLLLEESIADEFLA 320
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
L ++A+ + + +G +I + + I+ G ES +LLLDGRN +
Sbjct: 321 LLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREG-ESKGQLLLDGRNAGLAAA- 378
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
IGPTI DV + +EEIFGPVL+ + S E+A+++ N +QYG GAA++T
Sbjct: 379 ----IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434
Query: 456 AAARKFQTEIEAGQVGIN 473
+ A + ++AG V +N
Sbjct: 435 SRAHRMSRRLKAGSVFVN 452
|
Length = 494 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 216 bits (551), Expect = 4e-64
Identities = 149/488 (30%), Positives = 237/488 (48%), Gaps = 20/488 (4%)
Query: 28 DAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAA 87
D+ L+ +Q LI G ++++ + E IDV NPA + + +P +E +AA+ AA
Sbjct: 5 DSTLFRQQ-------ALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAA 57
Query: 88 KQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVE 147
+A P+WR R ++ + L+ D LA +T EQGK L +A+G++ +E
Sbjct: 58 NRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIE 117
Query: 148 HSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNT 206
G+ +P +++P+GV A I P+NFP AMI P A+ G T
Sbjct: 118 WFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP-ALAAGCT 176
Query: 207 FVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNV 265
VLKP+ + P +++ LAELA+ AG+P GV N+V G+ V + + +R +SF GS
Sbjct: 177 MVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTE 236
Query: 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV 325
G + + + K+V +G IV DA++D + A+ F AGQ C+ + +
Sbjct: 237 IGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRL 295
Query: 326 FVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+V D + +KL + L + G E +GP+I ++A ++ I +E GAR++
Sbjct: 296 YVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVV 355
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G+ GNF PTIL DV A+ + KEE FGP+ + + I N +
Sbjct: 356 CGGK----AHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTE 411
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG 503
+G A + + + +E G VGIN I + F G KAS G K G
Sbjct: 412 FGLAAYFYARDLSRVFRVGEALEYGIVGINTGI-ISNEVAPFGGIKASGLGREG--SKYG 468
Query: 504 VNFYTQIK 511
+ Y +IK
Sbjct: 469 IEDYLEIK 476
|
Length = 482 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 215 bits (550), Expect = 6e-64
Identities = 147/507 (28%), Positives = 228/507 (44%), Gaps = 68/507 (13%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITT 101
N I GAF+ES + INP V++++ E AAV+AA+ A W +
Sbjct: 3 NFINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAE 60
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGL-------EVVEHSCG-- 151
R ++ + + I R D + GK A D+ RG +VV+++
Sbjct: 61 RADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTEC 120
Query: 152 --MATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVL 209
MAT P+ ++ Y++R+PLGV I P+N P ++ W A+ CGNT V+
Sbjct: 121 FEMAT-------PDGKGALN-YAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVV 172
Query: 210 KPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-----------THDTVNAICDDANIRAI 258
KPSE+ PG + +L E+ G+P GV N+VHG H V+ AI
Sbjct: 173 KPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVD---------AI 223
Query: 259 SFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317
+F G G I +A+A G K V +G KN IV D + DA + + + F GQ
Sbjct: 224 TFTGETRTGSAI-MKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQV 282
Query: 318 CMALSTVVFVGDSKSWEDKLV----ERAKALKVNAGTEADADLGPVISKQAKERICRLIQ 373
C+ + V+V + D+ V RA++LK+ + ++GP+IS + ++++
Sbjct: 283 CLG-TERVYV--ERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYA 339
Query: 374 SGIESGARLLLDGRNIVVPG-YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432
+E GA ++ G G ++ PTI T + EEIFGP DS
Sbjct: 340 LAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSE 399
Query: 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFF------SFT 486
EE I + N YG A+++T + A + ++E G V +N +F F
Sbjct: 400 EEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNS-------WFLRDLRTPFG 452
Query: 487 GSKASFAGDLNFYGKAGVNFYTQIKTV 513
GSK S G G + FYT++ V
Sbjct: 453 GSKLSGIGREG--GVHSLEFYTELTNV 477
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 214 bits (546), Expect = 2e-63
Identities = 130/436 (29%), Positives = 213/436 (48%), Gaps = 39/436 (8%)
Query: 62 NPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121
+PAT + + +P T E+ A++AA+ A W T R++V+ L + I + +++
Sbjct: 2 DPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEIC 61
Query: 122 MNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYV---PNVSNGIDTYSLR--- 174
+ GKT+ DA G++ E + TL+ GE + G+ + R
Sbjct: 62 RVACRDTGKTMVDASLGEILVTCEKIRW-----TLKHGEKALRPESRPGGLLMFYKRARV 116
Query: 175 --EPLGVCAGICPFNFP------AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELA 226
EPLGV I +N+P +I A+ GN V+K SE+ +S +
Sbjct: 117 EYEPLGVVGAIVSWNYPFHNLLGPIIA------ALFAGNAIVVKVSEQVAWSSGFFLSII 170
Query: 227 MEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG-KRV 281
E G ++ +V +T A+ I I+F+GS G A+A+ V
Sbjct: 171 RECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVG-KKVMAAAAESLTPV 229
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVE-- 339
+G K+ IVL DA++D + + F ++GQ C+ + V+ + DKL+E
Sbjct: 230 VLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIV---HEKIYDKLLEIL 286
Query: 340 --RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
R +AL+ + D D+G +IS +R+ L+ +E GARLL G+ P Y G
Sbjct: 287 TDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQG 346
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
++ PT+L DVT DM+ +EE+FGPV++ M+A EEA++I N +YG GA++F
Sbjct: 347 HYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKR 406
Query: 458 ARKFQTEIEAGQVGIN 473
AR+ +++E G V IN
Sbjct: 407 ARRIASQLETGMVAIN 422
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 211 bits (538), Expect = 6e-63
Identities = 119/372 (31%), Positives = 188/372 (50%), Gaps = 9/372 (2%)
Query: 106 MLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVS 165
+ K+ IR +++ I E GK + A+ +V + +++ A GE + +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 166 NGIDTYSLREPLGVCAGICPFNFPA-MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE 224
G + + LGV GI P+NFP +I M P +T GNT V+KPSE P +I A+
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLT-GNTIVIKPSEFTPNNAIAFAK 119
Query: 225 LAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS 283
+ E GLP GV N+V G +TV + + + +S GS AG I A A+ +V
Sbjct: 120 IVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCL 179
Query: 284 NMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLVERAK 342
+G K IV+ DA++D + A+ + +GQ C V V G + ++L E +
Sbjct: 180 ELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQ 239
Query: 343 ALKV-NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIG 401
A++ N D +GP+I+ A ER+ + + +E GAR+ L G+ + GY +
Sbjct: 240 AVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY----YYP 295
Query: 402 PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKF 461
PT+L DV +M EE FGPVL + D+LEEAI + N + YG ++I+T + A K
Sbjct: 296 PTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKA 355
Query: 462 QTEIEAGQVGIN 473
++ G+ IN
Sbjct: 356 IKGLKFGETYIN 367
|
Length = 409 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 212 bits (541), Expect = 1e-62
Identities = 130/433 (30%), Positives = 217/433 (50%), Gaps = 21/433 (4%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G +++ + + INPAT EV++ + E+ AAV+AA+ AF SW P R R
Sbjct: 26 INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRAR 85
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPN 163
+ ++ I++ A+ + + GK +++++ D+ H G A L E
Sbjct: 86 HLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTEL--- 142
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
G +P+GV I P+NFP ++ W A+ GNT VLKP+E P +++ A
Sbjct: 143 --AG------WKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFA 194
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQS 283
E+ EAGLP GVLNIV G +A+ + + ++F GS G + + GK++
Sbjct: 195 EICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSL 254
Query: 284 NMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWED---KLVER 340
+G K+ IV DA++D+ + + A + GQ C A S ++ V +S E+ KL ER
Sbjct: 255 ELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLL-VQES-VAEELIRKLKER 312
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFI 400
L+V + D+G ++ +RI L++ G GA + G ++ G F
Sbjct: 313 MSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGP----FY 368
Query: 401 GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460
PT+ T+V +EEIFGPVL+ + + +EA+ + N YG A++++ + + A +
Sbjct: 369 PPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALE 428
Query: 461 FQTEIEAGQVGIN 473
++AG V IN
Sbjct: 429 VALSLKAGVVWIN 441
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 4e-60
Identities = 128/440 (29%), Positives = 215/440 (48%), Gaps = 32/440 (7%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
+ I+PA E ++++ T E++++ + AA++AF WR+ P R ++ ++ + +
Sbjct: 10 GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL 173
R+ + L ++ E GK L + G+V +++ + + G++ G +P+ G + +
Sbjct: 70 RKKKEALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPG---HRM 126
Query: 174 RE---PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI----MLAELA 226
E PLGV I FNFP + W +A+ CGN V KPS P +I ++A +
Sbjct: 127 MEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 227 MEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG 286
+ GLP + ++V G D A+ D + +SF GS G + +A+ R +G
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELG 246
Query: 287 AKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER-AKALK 345
N IV+ DA++D + A+ A G AGQRC + V +S D+++ER KA K
Sbjct: 247 GNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRR-LIVHESIY--DEVLERLKKAYK 303
Query: 346 -VNAGTEADAD--LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGP 402
V G D +GP+ +K A + I+ G +L G+ I P GN++ P
Sbjct: 304 QVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGP----GNYVEP 359
Query: 403 TILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ 462
TI+ +D KEE F P+L ++ D+LEEAI N+ G ++IFT+ A ++
Sbjct: 360 TIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWL 418
Query: 463 TEIEAGQVG-----INVPIP 477
G G +NV I
Sbjct: 419 -----GPKGSDCGIVNVNIG 433
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 205 bits (522), Expect = 5e-60
Identities = 138/470 (29%), Positives = 234/470 (49%), Gaps = 32/470 (6%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
+NPAT E +S LP ++ + A+ A F WR T I R + + + + +R +++
Sbjct: 12 VNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEM 71
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEV----VEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
A IT E GK + A+ +V + + EH G A L+ + + Y P
Sbjct: 72 AQMITREMGKPINQARAEVAKSANLCDWYAEH--GPAMLKAEPTLVENQQAVIEY---RP 126
Query: 177 LGVCAGICPFNFPAMIPLWMF-----PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
LG I P+NFP LW P+ + GN ++LK + G + ++A++ +AG+
Sbjct: 127 LGTILAIMPWNFP----LWQVMRGAVPI-LLAGNGYLLKHAPNVMGCAQLIAQVFKDAGI 181
Query: 232 PDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
P GV ++ +D V+ + +D+ I A++ GS AG I A+A A K+ +G +
Sbjct: 182 PQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241
Query: 292 IVLPDANMDATLNALAAAGFGAAGQRCMALST-VVFVGDSKSWEDKLVERAKALKVNAGT 350
IVL DA+++ + A A + GQ C A ++ G + ++ ++ V A ALK+
Sbjct: 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPR 301
Query: 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTA 410
+ + LGP+ ++ + +++ + GARLLL G I GN+ PT+L +VT
Sbjct: 302 DEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIA----GAGNYYAPTVLANVTP 357
Query: 411 DMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQV 470
+M ++EE+FGPV A E A+++ N +++G A IFT+ AR+ +E G V
Sbjct: 358 EMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGV 417
Query: 471 GINVPIPVPLPFFSFTGSKAS-FAGDLNFYGKAGVNFYTQIKTVTQQWRD 519
IN +F G K S F +L+ + G++ + I+TV W+D
Sbjct: 418 FIN-GYCASDARVAFGGVKKSGFGRELSHF---GLHEFCNIQTV---WKD 460
|
Length = 462 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 1e-59
Identities = 131/461 (28%), Positives = 211/461 (45%), Gaps = 53/461 (11%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
R+ L + + +V P T E ++ +P++T + +AA + A+ A +W T
Sbjct: 16 FERLRRLTARVDGAAGPT--REVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAAT 73
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P+ R V+L+ +L+ + ++L + E GK + A +V L+V +
Sbjct: 74 PVRERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEV---LDVA-----LTARYY 125
Query: 158 GEYVP------NVSNGI----DTYSLREPLGVCAGICPFNFPA------MIPLWMFPVAV 201
P + + T LR+P GV I P+N+P IP A+
Sbjct: 126 ARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIP------AL 179
Query: 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISF 260
GN VLKP + P ++ EL EAGLP + +V G V A+ D+A+ + F
Sbjct: 180 LAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNADY--LMF 237
Query: 261 VGSNVAGMHIYARASAKGKR---VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317
GS G + +A G+R +G KN IVL DA++D A F AGQ
Sbjct: 238 TGSTATGRVLAEQA---GRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQL 294
Query: 318 CMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375
C+++ + +V +S E V +A+++ AG + AD+G +IS+ E + +
Sbjct: 295 CISIERI-YVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDA 353
Query: 376 IESGARLLLDGR---NIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432
+ GA +L G+ ++ YE PT+LT VT DME +EE FGPV+ +
Sbjct: 354 VAKGATVLAGGKARPDLGPLFYE------PTVLTGVTPDMELAREETFGPVVSVYPVADV 407
Query: 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473
+EA++ N YG A+++T A R I AG V +N
Sbjct: 408 DEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVN 448
|
Length = 524 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 1e-59
Identities = 144/469 (30%), Positives = 221/469 (47%), Gaps = 30/469 (6%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
I INPAT E V T++E AA++ A F +R T R R +L+ +
Sbjct: 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEA 62
Query: 118 DKLAMNITTEQGKTLKDAQGDVF---RGLE-VVEHSCGMATLQMGEYVPNVSNGIDTYSL 173
D++A +T E GKTL A+ + +G EH+ + + + Y
Sbjct: 63 DQVAALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADEPAD--AAAVGASRAYVR 120
Query: 174 REPLGVCAGICPFNFPAMIPLWM---FPV-AVTCGNTFVLKPSEKDPGASIMLAELAMEA 229
+PLGV + P+NFP LW F A+ GN +LK + P ++ LA+L A
Sbjct: 121 YQPLGVVLAVMPWNFP----LWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176
Query: 230 GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKN 289
G PDG + V AI D + A + GS AG + A A + K+ +G +
Sbjct: 177 GFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSD 236
Query: 290 HGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348
IV+P A++D A GQ C+A + D ++ +K V R AL+V
Sbjct: 237 PFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGD 296
Query: 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDV 408
T+ D D+GP+ ++Q ++ + + + + +GA +L G+ PG+ F PT++TD+
Sbjct: 297 PTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGW----FYPPTVITDI 352
Query: 409 TADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468
T DM Y EE+FGPV + ++EAI+I N +G G+ +T A +F ++EAG
Sbjct: 353 TPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412
Query: 469 QVGINVPIPVPLPFFSFTGSKASFAGDLNFYGK----AGVNFYTQIKTV 513
QV IN + V P F G K S YG+ G+ + IKTV
Sbjct: 413 QVFIN-GMTVSYPELPFGGVKRS------GYGRELSAHGIREFCNIKTV 454
|
Length = 457 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 197 bits (504), Expect = 2e-57
Identities = 140/473 (29%), Positives = 216/473 (45%), Gaps = 37/473 (7%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
P T E + +LP +T + +AA + A+ A +W P R V L+ +L+ D+L
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEH---SCG--MATLQMGEYVPNVSNGIDTYSLRE 175
I E GK + A +V V + + + +P ++ T R
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTR---TTVNRR 117
Query: 176 PLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGV 235
P GV I P+N+P + + A+ GN VLKP + ++ EL +EAGLP +
Sbjct: 118 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDL 177
Query: 236 LNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL 294
+V G V AI D+A+ + F GS G + RA + +G KN IVL
Sbjct: 178 WQVVTGPGSEVGGAIVDNADY--VMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVL 235
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVERAKALKVNAGTEA 352
DA++D A F AGQ C+++ ++V +S E + V R +AL++ A +
Sbjct: 236 EDADLDKAAAGAVRACFSNAGQLCVSIER-IYVHESVYDEFVRRFVARTRALRLGAALDY 294
Query: 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG---YEHGNFIGPTILTDVT 409
D+G +IS+ +R+ + + GA +L GR G YE PT+LT VT
Sbjct: 295 GPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYE------PTVLTGVT 348
Query: 410 ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469
DME + EE FGPV+ + +EAI++ N YG A+++T GA R+ + AG
Sbjct: 349 EDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGT 408
Query: 470 VGIN-------VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515
V +N I P+ G K S G + G G+ YT+ +TV
Sbjct: 409 VNVNEGYAAAWASIDAPM-----GGMKDSGLGRRH--GAEGLLKYTETQTVAV 454
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 197 bits (501), Expect = 1e-56
Identities = 132/446 (29%), Positives = 209/446 (46%), Gaps = 23/446 (5%)
Query: 42 PNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P +IGG +++++ ++P A EVV E +AA+ AA AF +W++ P
Sbjct: 20 PLVIGGEWVDTKERMVS--VSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQE 77
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++LK +L+RR +L +T E GK +A DV ++ + + A
Sbjct: 78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPA 137
Query: 161 VPNVS-NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V V G D S LG I P+NFP I M V GNT + KP+E
Sbjct: 138 VEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVG 197
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+ E+ EAG P GV+ + G + V + + IR I+F GS G IY A+
Sbjct: 198 YKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLA 257
Query: 279 ------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKS 332
KR+ G KN IV A+ + + + + FG GQ+C A S + + +
Sbjct: 258 PGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAAS-RLILTQG-A 315
Query: 333 WE---DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389
+E ++L++RA+ L V E DLGPVI + + ++ I+ G G +L+L G+ +
Sbjct: 316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRL 374
Query: 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL--LCMQADSLEEAIKIVNKNQYGNG 447
GY F+ PT++ +V +EEIFGPVL + + D EA+++ N YG
Sbjct: 375 EGEGY----FVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLT 430
Query: 448 AAIFTSSGAAARKFQTEIEAGQVGIN 473
+++ + + E G + IN
Sbjct: 431 GGVYSRKREHLEEARREFHVGNLYIN 456
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 2e-53
Identities = 131/443 (29%), Positives = 203/443 (45%), Gaps = 19/443 (4%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
N IGG ++ EY D I P T +V ++P +T E+ + A+ AA A +W T + R
Sbjct: 3 NFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAER 62
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYV 161
++ K+ + + +++ LA+ T + GK +++ D+ ++ + G Q G +
Sbjct: 63 ANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGS-I 121
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ Y EPLGV I P+NFP ++ W A+ GN VLKP+E+ P + ++
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
L EL + LP GV+N+V+G + I ++F G G I AS
Sbjct: 182 LMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENIIP 240
Query: 281 VQSNMGAKNHGIVLPD--ANMDATLNALAAAGFGA----AGQRCMALSTVVFVGDSKSWE 334
V +G K+ I D DA + A GF G+ C S + +S
Sbjct: 241 VTLELGGKSPNIFFADVMDADDAFFDK-ALEGFVMFALNQGEVCTCPSRALI---QESIY 296
Query: 335 DKLVERA----KALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
D+ +ERA KA+K + + +G S + E+I I G E GA +L G
Sbjct: 297 DRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNE 356
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
+ G G + PT M ++EEIFGPVL EEA++I N YG GA +
Sbjct: 357 LGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGV 415
Query: 451 FTSSGAAARKFQTEIEAGQVGIN 473
+T G A + I+AG+V N
Sbjct: 416 WTRDGNTAYRMGRGIQAGRVWTN 438
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 185 bits (473), Expect = 1e-52
Identities = 139/462 (30%), Positives = 212/462 (45%), Gaps = 34/462 (7%)
Query: 45 IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQR 104
I G +I E + NP + EV+ Q T + AAV AA+ AFP+W RQ
Sbjct: 5 INGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 105 VMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV 164
++ + L+ + ++LA I E GK L +A +V + + S + GE +
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSEM 123
Query: 165 SNGIDTYSLR-EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
++G LR P GV A P+NFP +P A+ GNT V KPSE P + +
Sbjct: 124 ADG--AAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTV 181
Query: 224 ELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYAR-ASAKGKRVQ 282
+L +AGLP GVLN+V G +T A+ +I + F GS G ++ + A K +
Sbjct: 182 KLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILA 241
Query: 283 SNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER-- 340
MG N ++ A++DA ++ + + F +AGQRC + + V D + R
Sbjct: 242 LEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTC-ARRLLVPQGA-QGDAFLARLV 299
Query: 341 --AKALKVNAGTEADAD----LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
AK L V DA+ +G VIS+QA + + + G + LL+ +
Sbjct: 300 AVAKRLTVGR---WDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQ---- 352
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ P I+ DVT E EE FGP+L ++ D +EAI++ N ++G A + +
Sbjct: 353 AGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDD 411
Query: 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTG--SKASFAG 494
+F EI AG V N P+ TG S A F G
Sbjct: 412 REDYDQFLLEIRAGIVNWNKPL---------TGASSAAPFGG 444
|
Length = 487 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 4e-52
Identities = 140/472 (29%), Positives = 217/472 (45%), Gaps = 44/472 (9%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
G + S S + + + NP+T++ ++ T EE A+ +AK A +W TP+ R
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC--GMATLQMGEYV 161
++ K +++ +A + E K KDA +V R +++ ++ G+ L G+++
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 162 PNVS---NGIDTYSL--REPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216
+ S N + Y L + PLGV I PFN+P + + A+ GN VLKP +
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 217 GASIMLAELAMEAGLPDGVLNIVHG----------THDTVNAICDDANIRAISFVGSNVA 266
A++ + AG P G+++ V G H VN I SF G +
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCI---------SFTGGD-T 248
Query: 267 GMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVF 326
G+ I +A +Q +G K+ IVL DA++D + GF +GQRC A+ V+
Sbjct: 249 GIAISKKAGMVP--LQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLV 306
Query: 327 VGDSKSWEDKLVER--AKALKVNAGT-EADADLGPVISKQAKERICRLIQSGIESGARLL 383
+ +S D LVE+ AK K+ G E D D+ PV+S+ + I L+ E GA
Sbjct: 307 M---ESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFC 363
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
+ + GN I P +L +V DM EE FGPVL ++ +S+EE I N +
Sbjct: 364 QEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASN 416
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLP-FFSFTGSKASFAG 494
+G +FT A +E G V IN P P F F G K S G
Sbjct: 417 FGLQGCVFTRDINKAILISDAMETGTVQINSA-PARGPDHFPFQGLKDSGIG 467
|
Length = 496 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 183 bits (466), Expect = 7e-52
Identities = 136/443 (30%), Positives = 203/443 (45%), Gaps = 28/443 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
LI G + S E V NPAT EV+ ++ + E+ AAV AA AF W T R
Sbjct: 5 LINGELV-SGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLK-------DAQGDVFRGLEVVEHSCGMATLQ 156
+LKL ++I + A + GK L A DVFR ++ L
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARC--LSGLA 121
Query: 157 MGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216
GEY+ ++ I R+PLGV A I P+N+P M+ W A+ GN VLKPSE P
Sbjct: 122 AGEYLEGHTSMIR----RDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITP 177
Query: 217 GASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS 275
++ LAELA + P GV+NI+ G TV + + +R +S GS G HI + +
Sbjct: 178 LTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236
Query: 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWED 335
KR +G K IV DA++DA + + GF AGQ C A + + D
Sbjct: 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYA---QRGIYD 293
Query: 336 KLVER----AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGRNIV 390
LVE+ LK A + +LGP+ S ER+ + ++ G +++ G
Sbjct: 294 TLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRK 353
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GY + PT+L D ++E+FGPV+ D E+ + N +QYG +++
Sbjct: 354 GNGY----YFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSV 409
Query: 451 FTSSGAAARKFQTEIEAGQVGIN 473
+T A + ++ G +N
Sbjct: 410 WTKDVGRAHRLSARLQYGCTWVN 432
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 182 bits (464), Expect = 2e-51
Identities = 143/494 (28%), Positives = 226/494 (45%), Gaps = 45/494 (9%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSW-RNTPIT 100
LI G + + + +NPAT+EV+ T + AA++AA++AF W R+T +
Sbjct: 4 LIDGKLVAGSAGTF-PTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRG-LEVVEHSCGMA-----T 154
R R + +L++ +R +++L E G G G ++ + + +A T
Sbjct: 62 -RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAWT 120
Query: 155 LQMGEYVPNVSNGIDTYS--LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212
+G P GI T RE +GV I P+NFP I L A+ GNT VLKP+
Sbjct: 121 TDLGVASPM---GIPTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPA 177
Query: 213 EKDPGASIMLAELAME-AGLPDGVLNIVHGTHDTVNA-ICDDANIRAISFVGSNVAGMHI 270
P + +L EL E P GV+NIV + + A + D + +SF GS G +
Sbjct: 178 PDTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAV 237
Query: 271 YARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGA---AGQRCMALSTVVFV 327
A A+A K+V +G K+ IVL DA++ A A + A F AGQ C A++T + V
Sbjct: 238 MADAAATLKKVFLELGGKSAFIVLDDADLAA---ACSMAAFTVCMHAGQGC-AITTRLVV 293
Query: 328 GDSKSWEDKLVERAKA----LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
++ D+ V A A +K + GPVIS + ++R+ + + G R
Sbjct: 294 PRARY--DEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFA 351
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G + G F+ PT++ + + +EEIFGPVL + D ++A++I N +
Sbjct: 352 CGGG--RPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSP 409
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFS----FTGSKASFAGDLNFY 499
YG +F + A + G V +N + ++S F G K S G
Sbjct: 410 YGLSGTVFGADPERAAAVAARVRTGTVNVNGGV-----WYSADAPFGGYKQSGIG--REM 462
Query: 500 GKAGVNFYTQIKTV 513
G AG Y + K +
Sbjct: 463 GVAGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 8e-51
Identities = 143/445 (32%), Positives = 211/445 (47%), Gaps = 31/445 (6%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
NPATQEV+ Q + + +AAV+AA+ AFP+W + R V+ + L+ + L
Sbjct: 18 TNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEAL 77
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLR-EPLGV 179
A I E GK L + + +V + V S + GE + +G LR P GV
Sbjct: 78 ARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENPMPDG--RAVLRHRPHGV 135
Query: 180 CAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239
A P+NFP +P A+ GNT V KPSE P + +L +AGLP GVLN+V
Sbjct: 136 VAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLV 195
Query: 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK-GKRVQSNMGAKNHGIVLPDAN 298
G +T A+ +I + F GS+ G ++ + + + K + MG N IV A+
Sbjct: 196 QGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVAD 255
Query: 299 MDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE---DKLVERAKALKVNAGTEADAD 355
+DA ++ + + F +AGQRC + + V D + +LVE A+ L V A DA+
Sbjct: 256 IDAAVHLIIQSAFISAGQRC-TCARRLLVPDGAQGDAFLARLVEVAERLTVGA---WDAE 311
Query: 356 ----LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD 411
+G VIS QA +R+ + G + LL R + + P I+ DVT
Sbjct: 312 PQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQL----DPGAALLTPGII-DVTGV 366
Query: 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVG 471
E EE FGP+L ++ D +EAI I N ++G A + + +F EI AG V
Sbjct: 367 AELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVN 426
Query: 472 INVPIPVPLPFFSFTG--SKASFAG 494
N P+ TG S A F G
Sbjct: 427 WNKPL---------TGASSAAPFGG 442
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 2e-46
Identities = 128/470 (27%), Positives = 216/470 (45%), Gaps = 26/470 (5%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
I+V P VV +P + ++ + A + A P+ R ++ + L+
Sbjct: 19 IEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYRPTLTRY---ERSAILDRAAALLAARK 75
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP--NVSNGI--DTYSL 173
++++ IT E G + KD+ +V R +V+ + A G+ +G ++
Sbjct: 76 EEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQ 135
Query: 174 REPL-GVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
REPL GV + I PFN P A+ N V+KPSEK P +++ LA++ EAGLP
Sbjct: 136 REPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLP 195
Query: 233 DGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
+L +V G + + + + ++ ++F G G +I ARA + R +G +
Sbjct: 196 PQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAGYR--RQVLELGGNDPL 253
Query: 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAG 349
IV+ DA++D + + +GQRC A+ ++ V +S + + LVE+ +A +
Sbjct: 254 IVMEDADLDRAADLAVKGSYKNSGQRCTAVKRML-VQESVADRFTELLVEKTRAWRYGDP 312
Query: 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLL-DGRNIVVPGYEHGNFIGPTILTDV 408
+ D+G VI + A + I GARLLL + R+ G PT+L V
Sbjct: 313 MDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD--------GALYAPTVLDRV 364
Query: 409 TADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468
M +EE FGPV ++ +++AI+I N YG + + T+ +F E++ G
Sbjct: 365 DPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVG 424
Query: 469 QVGI-NVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
V + VP L F G K S G +A +F T +KT + W
Sbjct: 425 TVNVWEVP-GYRLELTPFGGIKDSGLGYKEGVQEAMKSF-TNLKTYSLPW 472
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 164 bits (418), Expect = 4e-45
Identities = 125/447 (27%), Positives = 201/447 (44%), Gaps = 27/447 (6%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVML--KLQELIRR 115
++V+NP + + ++P A+ A F RN + +R+ + +L +L+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLD-RNNWLPAHERIAILERLADLMEE 59
Query: 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP----NVSNGIDTY 171
D+LA+ I E GK L DA+ +V R ++ VE + G +P S G +
Sbjct: 60 RADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAF 119
Query: 172 SLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
+ REP+GV I FN P + + A+ G ++KP+ P + + +L EAGL
Sbjct: 120 TTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGL 179
Query: 232 PDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291
P+G V + + D + SF+GS G + ++ A G R A HG
Sbjct: 180 PEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKL-APGTRC-----ALEHG 233
Query: 292 -----IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKAL 344
IV A++DA + L GF AGQ C+++ V FV + +L A+ L
Sbjct: 234 GAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRV-FVPAEIADDFAQRLAAAAEKL 292
Query: 345 KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTI 404
V T+ D ++GP+I + +R+ + + +GARLL G+ + Y PT+
Sbjct: 293 VVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYA------PTV 346
Query: 405 LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464
L D D + +EIFGPV+ D L+EAI N AA+FT A K
Sbjct: 347 LLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRR 406
Query: 465 IEAGQVGINVPIPVPLPFFSFTGSKAS 491
++A V +N + + F G + S
Sbjct: 407 LDATAVMVNDHTAFRVDWMPFAGRRQS 433
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 165 bits (419), Expect = 8e-45
Identities = 124/448 (27%), Positives = 197/448 (43%), Gaps = 31/448 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+I G E+ VI+PA + + ++ L E+ AA++ A AF W TP+ R
Sbjct: 36 IINGEETETGEGA--PVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV- 161
++ K +L+ + +L E GKTL DA +V ++ + A +
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
P + ++ L GV I P+NFP I A+ GNT + KP+E+ P +
Sbjct: 154 PGPTGELNGLEL-HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAAR 212
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIY-ARASAKGK 279
EL EAG+P VL +V G + + A+ I + F GS I A A G
Sbjct: 213 AVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGP 272
Query: 280 RVQSN--MGAKNHGIVLPDANMD-ATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWED 335
+ G KN IV A + A + + +A FG+AGQRC AL + + ++ + +
Sbjct: 273 ILPLIAETGGKNAMIVDSTALPEQAVKDVVQSA-FGSAGQRCSALRLLYLQEEIAERFIE 331
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG-ARLL----LDGRNIV 390
L +LKV + D+GP+I K A + + + + G A L+ LD N
Sbjct: 332 MLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE--LMRGEAWLIAPAPLDDGN-- 387
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS--LEEAIKIVNKNQYGNGA 448
G F+ P I+ V E+FGP+L ++ + L+EAI+ +N YG
Sbjct: 388 ------GYFVAPGIIEIVGIF--DLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTL 439
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINVPI 476
I + ++ +EAG + IN I
Sbjct: 440 GIHSRDEREIEYWRERVEAGNLYINRNI 467
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 5e-43
Identities = 116/442 (26%), Positives = 212/442 (47%), Gaps = 14/442 (3%)
Query: 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120
+NPA + ++++ + E+++ + A ++A W P R ++ ++ + +R +D L
Sbjct: 39 VNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYL 98
Query: 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVC 180
++ E GK L + G+V +++ + + G++ G +P+ + PLG+
Sbjct: 99 GRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIV 158
Query: 181 AGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI----MLAELAMEAGLPDGVL 236
I FNFP + W +A+ CGN V K + P +I ++AE+ + LP +
Sbjct: 159 GVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIF 218
Query: 237 NIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296
G + AI D I +SF GS+ G+ + +A+ + + N IV+ D
Sbjct: 219 TSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDD 278
Query: 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADA 354
A++ + ++ A G AGQRC + + +S ++L+ K +K+ E
Sbjct: 279 ADIQLAVRSVLFAAVGTAGQRCTTCRR-LLLHESIYDDVLEQLLTVYKQVKIGDPLEKGT 337
Query: 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMEC 414
LGP+ + ++K+ + I+ G ++L G I GNF+ PTI+ +++ D +
Sbjct: 338 LLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAI----ESEGNFVQPTIV-EISPDADV 392
Query: 415 YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKF--QTEIEAGQVGI 472
KEE+FGPVL M+ +LEEAI+I N G ++IFT + K+ + G V +
Sbjct: 393 VKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNV 452
Query: 473 NVPIPVPLPFFSFTGSKASFAG 494
N+P +F G KA+ G
Sbjct: 453 NIPTNGAEIGGAFGGEKATGGG 474
|
Length = 508 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 141 bits (359), Expect = 5e-37
Identities = 123/465 (26%), Positives = 194/465 (41%), Gaps = 58/465 (12%)
Query: 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKL-----------QELIRRDIDKLAM- 122
T +E + S + F S + + R + +L E +++D+ +
Sbjct: 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFE 61
Query: 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL------REP 176
+ TE D L ++++ + E V + + +EP
Sbjct: 62 TLLTEVSGVKNDI-------LHMLKN---LKKWAKDEKVKDGPL---AFMFGKPRIRKEP 108
Query: 177 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVL 236
LGV I P+N+P ++ L A+ G T VLKPSE P + +LAEL + L
Sbjct: 109 LGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDPDAF 167
Query: 237 NIVHGTHDTVNAICD---DANIRAISFVGSNVAGMHIYARASAKG-KRVQSNMGAKNHGI 292
+V G A+ + D I + GS G I A A+AK V +G K+ I
Sbjct: 168 QVVQGGVPETTALLEQKFDK----IFYTGSGRVG-RIIAEAAAKHLTPVTLELGGKSPVI 222
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAK-ALK--VNAG 349
V +A+++ + FG AGQ C+A V V S D+ VE K L G
Sbjct: 223 VTKNADLELAAKRILWGKFGNAGQICVAPD-YVLVDPSV--YDEFVEELKKVLDEFYPGG 279
Query: 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVT 409
A D +++ + R+ L+ + ++++ G E FI PTI++DV+
Sbjct: 280 ANASPDYTRIVNPRHFNRLKSLLD---TTKGKVVIGGEMD-----EATRFIPPTIVSDVS 331
Query: 410 ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469
D EE+FGPVL ++ D L+EAIK++N IFT + T +G
Sbjct: 332 WDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGG 391
Query: 470 VGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
V IN I V + F G S G ++GK G + +T +TV
Sbjct: 392 VVINDTLIHVGVDNAPFGGVGDSGYG--AYHGKYGFDTFTHERTV 434
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 2e-36
Identities = 108/422 (25%), Positives = 183/422 (43%), Gaps = 23/422 (5%)
Query: 60 VINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118
V NPA +++V Q+ +AA+ +A+QAFP+W TP R + +L +L+ +
Sbjct: 55 VTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMP 114
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
+L E GKT+ +A +V ++ + Y V + + +S+ G
Sbjct: 115 ELMALCVREAGKTIHNAIAEVREAVDFCRY-----------YAKQVRDVLGEFSVE-SRG 162
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
V I P+NFP I A+ GNT + KP+E+ + EL EAG P G + +
Sbjct: 163 VFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQL 222
Query: 239 VHGTHDTVN-AICDDANIRAISFVGSNVAGMHI---YARASAKGKRVQSNMGAKNHGIVL 294
+ G V A+ D I ++F GS I A+ + + G +N IV
Sbjct: 223 LPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVD 282
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERA-KALKVNAGTEAD 353
A + + + + F +AGQRC AL + D +++ A + LKV
Sbjct: 283 STALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLT 342
Query: 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADME 413
D+GPVI +AK+ + I+ + + + +HG F+ PT+ D+
Sbjct: 343 TDVGPVIDAEAKQNLLAHIEH-MSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIA 399
Query: 414 CYKEEIFGPVLLCMQ--ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVG 471
EE+FGPVL ++ A L++ + +N+ YG + + R + G
Sbjct: 400 ELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCY 459
Query: 472 IN 473
+N
Sbjct: 460 VN 461
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 1e-35
Identities = 107/358 (29%), Positives = 166/358 (46%), Gaps = 49/358 (13%)
Query: 174 REPLGVCAGICPFNFP---AMIPLWMFPV-AVTCGNTFVLKPSEKDPGASIMLAELAMEA 229
EPLGV I P+N+P A+ PL + A+ GNT VLKPSE P S +LA+L +
Sbjct: 98 PEPLGVVLIIGPWNYPLQLALAPL----IGAIAAGNTVVLKPSELAPATSALLAKL-IPK 152
Query: 230 GLPDGVLNIVHGTHDTVNAICD---DANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG 286
+ +V G + A+ D I F GS G + A+ V +G
Sbjct: 153 YFDPEAVAVVEGGVEVATALLAEPFDH----IFFTGSPAVGKIVMEAAAKHLTPVTLELG 208
Query: 287 AKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKV 346
K+ IV DAN++ +A F AGQ C+A V V +S +D+L+E K +
Sbjct: 209 GKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYV-LV--HESIKDELIEELKK-AI 264
Query: 347 NA----GTEADADLGPVISKQAKERICRLIQSG-IESGARLLLDGRNIVVPGYEHGNFIG 401
+ D G +I+++ +R+ L+ G + G ++ + R +I
Sbjct: 265 KEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVDKEER-----------YIA 313
Query: 402 PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ-----YGNGAAIFTSSGA 456
PTIL DV+ D +EEIFGP+L + D L+EAI+ +N Y +F+ A
Sbjct: 314 PTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALY-----LFSEDKA 368
Query: 457 AARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
+ E +G V +N V + +P F G S G ++GKAG + ++ +K+V
Sbjct: 369 VQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMG--AYHGKAGFDTFSHLKSV 424
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 2e-35
Identities = 118/430 (27%), Positives = 192/430 (44%), Gaps = 41/430 (9%)
Query: 60 VINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118
VINPA ++V + T + + A+ AA A P W TP R ++ + +L+ +
Sbjct: 131 VINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMP 190
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
+L + E GKTL +A +V ++ + + G A G T+ PLG
Sbjct: 191 QLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN---------LTH---RPLG 238
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238
I P+NFP I A+ GN+ + KP+E+ P + L EAG+P GVL +
Sbjct: 239 PVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQL 298
Query: 239 VHGTHDTVNA-ICDDANIRAISFVGS-NVAGMHIYARASAKGKRVQ--SNMGAKNHGIVL 294
+ G +TV A + DA + + F GS VA + A +G+ + + G +N IV
Sbjct: 299 LPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVD 358
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAK----ALKVNAGT 350
A + + + A+ F +AGQRC AL V+ + + D+++ K L+V
Sbjct: 359 SSALAEQVVADVLASAFDSAGQRCSALR-VLCLQEDV--ADRILTMLKGAMAELRVGNPD 415
Query: 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI----VVPGYEHGNFIGPTIL- 405
D+GPVI +AK I + IQ + GR + + G F+ PT++
Sbjct: 416 RLTTDVGPVIDAEAKANIEKHIQ-------TMRSKGRLVHQAAAPNSLQKGTFVAPTLIE 468
Query: 406 TDVTADMECYKEEIFGPVL--LCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463
+ ++ + E+FGPVL + + D L+E I +N YG + T
Sbjct: 469 LENLDEL---QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTE 525
Query: 464 EIEAGQVGIN 473
AG + +N
Sbjct: 526 RAHAGNLYVN 535
|
Length = 769 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 3e-34
Identities = 116/486 (23%), Positives = 196/486 (40%), Gaps = 76/486 (15%)
Query: 32 YSKQHNPPR-VPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQ 89
++ + +P +IGG E R+ + P V++ + A+ AA +
Sbjct: 23 LAELKSLTVEIPLVIGGK--EVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALE 80
Query: 90 AFPSWRNTPITTRQRVMLKLQELI----RRDIDKLAMNITTEQGKTLKDAQGDV------ 139
A W P R + LK +L+ R +++ M QGK + A+ D
Sbjct: 81 ARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLG---QGKNVWQAEIDAACELID 137
Query: 140 -FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLRE--PL-GVCAGICPFNFPAM---- 191
R V ++ P +S+ ++ E PL G + PFNF A+
Sbjct: 138 FLR-FNVKYAE------ELYAQQP-LSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189
Query: 192 --IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NA 248
P M GN + KPS+ ++ ++ ++ EAGLP GV+N V G V +
Sbjct: 190 AGAPALM-------GNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDT 242
Query: 249 ICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-------------GAKNHGIVLP 295
+ ++ + F GS ++ K++ N+ G KN +V P
Sbjct: 243 VLASPHLAGLHFTGSTPTFKSLW-------KQIGENLDRYRTYPRIVGETGGKNFHLVHP 295
Query: 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEAD 353
A++D+ + A F GQ+C A S +V +S +++L+E K +K+ +
Sbjct: 296 SADVDSLVTATVRGAFEYQGQKCSAASR-AYVPESLWPEVKERLLEELKEIKMGDPDDFS 354
Query: 354 ADLGPVISKQAKERICRLIQSGIES-GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADM 412
+G VI ++A +RI I A ++ G+ GY F+ PT++
Sbjct: 355 NFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGY----FVEPTVIETTDPKH 410
Query: 413 ECYKEEIFGPVLLCM--QADSLEEAIKIVNK-NQYGNGAAIFTSSGAAARKFQTEIE--A 467
+ EEIFGPVL EE +++V+ + Y AIF A R+ + A
Sbjct: 411 KLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAA 470
Query: 468 GQVGIN 473
G IN
Sbjct: 471 GNFYIN 476
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 3e-34
Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 27/310 (8%)
Query: 175 EPLGVCAGICPFNFP---AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
EP GVC I P+N+P A PL A+ GNT +LKPSE P S ++A++ EA
Sbjct: 99 EPKGVCLIISPWNYPFNLAFGPL---VSAIAAGNTAILKPSELTPHTSAVIAKIIREAFD 155
Query: 232 PDGVLNIVHGTHDTVNAICD---DANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK 288
D V + G + A+ + D I F GS G + A A+ V +G K
Sbjct: 156 EDEV-AVFEGDAEVAQALLELPFDH----IFFTGSPAVGKIVMAAAAKHLASVTLELGGK 210
Query: 289 NHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKAL--KV 346
+ IV A++ +A F AGQ C+A V FV +S +D VE KA K
Sbjct: 211 SPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYV-FVHESV--KDAFVEHLKAEIEKF 267
Query: 347 ---NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPT 403
+A +A DL +++ + +R+ L+ + GA++ G+ +I PT
Sbjct: 268 YGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-----AAQRYIAPT 322
Query: 404 ILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463
+LT+VT DM+ +EEIFGPVL + + L+E I+ +N +F+ A K
Sbjct: 323 VLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLA 382
Query: 464 EIEAGQVGIN 473
+G V +N
Sbjct: 383 RTSSGGVVVN 392
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-33
Identities = 127/495 (25%), Positives = 195/495 (39%), Gaps = 86/495 (17%)
Query: 14 LKAVRPQIFAKFSTDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQL 72
+ A RP + L + +P +IGG + + S E I ++P Q V+++
Sbjct: 5 VLAFRPGSPERDLLRKALKELKGRMEEIPLVIGGEEVWT-SGERIYQVSPHNHQAVLAKA 63
Query: 73 PLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI----RRDIDKLAMNITTEQ 128
T E AV AA A W P R + LK +L+ R +I M Q
Sbjct: 64 TNATEELANKAVEAALDAKKEWSLLPFYDRAAIFLKAADLLSGPYRAEILAATM---LGQ 120
Query: 129 GKTLKDAQ-------GDVFR-----GLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREP 176
KT+ A+ D FR E+ E Q P N + L
Sbjct: 121 SKTVYQAEIDAVAELIDFFRFNAKYARELYE--------QQPISAPGEWNRTEYRPLE-- 170
Query: 177 LGVCAGICPFNFPAM------IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230
G I PFNF A+ P M GNT + KPS+ ++ ++ + EAG
Sbjct: 171 -GFVYAISPFNFTAIAGNLAGAPALM-------GNTVIWKPSDTAMLSNYLVMRILEEAG 222
Query: 231 LPDGVLNIVHG----THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM- 285
LP GV+N V G DTV A D ++ I F GS H++ K+V N+
Sbjct: 223 LPPGVINFVPGDGPLVSDTVLA---DPDLAGIHFTGSTPTFKHLW-------KQVAQNLD 272
Query: 286 ------------GAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSW 333
G K+ +V P A+++ ++ F GQ+C A S ++V S
Sbjct: 273 RYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSR-LYVPHSLWP 331
Query: 334 E--DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+L+ +KV + +G VI +++ +I + I+ + L I+
Sbjct: 332 RFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSAL-----TILA 386
Query: 392 PG-YE--HGNFIGPTILTDVTADMECYKEEIFGPVL--LCMQADSLEEAIKIVNK-NQYG 445
G Y+ G F+ PT++ KEEIFGPVL D +E + +V+ YG
Sbjct: 387 GGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYG 446
Query: 446 NGAAIFTSSGAAARK 460
A+F A +
Sbjct: 447 LTGAVFAKDRDAILE 461
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-32
Identities = 117/406 (28%), Positives = 181/406 (44%), Gaps = 60/406 (14%)
Query: 50 IESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLK 108
I + E V++PA + VV ++ E+ + A++AA+ AFP+W TP+ R ++ +
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILER 615
Query: 109 LQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVE---HSCGMATLQMGEYV---- 161
+L+ + +L E GKTL+DA +V R E V+ + A G
Sbjct: 616 AADLLEANRAELIALCVREAGKTLQDAIAEV-R--EAVDFCRYYAAQARRLFGAPEKLPG 672
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
P G GV I P+NFP I L A+ GNT + KP+E+ P +
Sbjct: 673 P---TGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAE 729
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
+L EAG+P VL ++ G TV A+ D I ++F GS I R A
Sbjct: 730 AVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARII-NRTLA---- 784
Query: 281 VQSNMGAKNHGIV------------------LPDANMDATLNALAAAGFGAAGQRCMALS 322
A++ IV LP+ +D + +A F +AGQRC AL
Sbjct: 785 ------ARDGPIVPLIAETGGQNAMIVDSTALPEQVVDD---VVTSA-FRSAGQRCSALR 834
Query: 323 TVVFVGDSKSWEDKLVE----RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378
V+FV + + D+++E LKV D+GPVI +AK + I+ ++
Sbjct: 835 -VLFVQEDIA--DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIER-MKR 890
Query: 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424
ARLL + G E+G+F+ PT + + E+FGP+L
Sbjct: 891 EARLLAQLP--LPAGTENGHFVAPTAFE--IDSISQLEREVFGPIL 932
|
Length = 1038 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 3e-29
Identities = 121/412 (29%), Positives = 187/412 (45%), Gaps = 61/412 (14%)
Query: 60 VINPATQ-EVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118
V+NPA +VV + + E+ + A++AA+ AFP W TP R ++ + +L+ +
Sbjct: 571 VLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMP 630
Query: 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG 178
+L E GKTL +A +V R E V+ Q + NG +PLG
Sbjct: 631 ELFALAVREAGKTLANAIAEV-R--EAVDF-LRYYAAQ----ARRLLNG----PGHKPLG 678
Query: 179 VCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA---ELAMEAGLPDGV 235
I P+NFP I A+ GNT + KP+E+ P ++ A L EAG+P
Sbjct: 679 PVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTP---LIAARAVRLLHEAGVPKDA 735
Query: 236 LNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM------GAK 288
L ++ G TV A+ D I + F GS I R AK R + G +
Sbjct: 736 LQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLI-QRTLAK--RSGPPVPLIAETGGQ 792
Query: 289 NHGIVLPDANMDATLNALA--------AAGFGAAGQRCMALSTVVFVGDSKSWEDKLVER 340
N IV D++ AL A+ F +AGQRC AL V+ + + D+++
Sbjct: 793 NAMIV------DSS--ALPEQVVADVIASAFDSAGQRCSALR-VLCL--QEDVADRVLTM 841
Query: 341 AK----ALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
K L++ D+GPVI +A+ I I+ + + RL+ + + E
Sbjct: 842 LKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIE-AMRAAGRLVH--QLPLPAETEK 898
Query: 397 GNFIGPTIL-TDVTADMECYKEEIFGPVL--LCMQADSLEEAIKIVNKNQYG 445
G F+ PT++ D +D+E E+FGPVL + +AD L+ I +N YG
Sbjct: 899 GTFVAPTLIEIDSISDLE---REVFGPVLHVVRFKADELDRVIDDINATGYG 947
|
Length = 1208 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 1e-28
Identities = 102/366 (27%), Positives = 163/366 (44%), Gaps = 41/366 (11%)
Query: 171 YSLREPLGVCAGICPFNFP---AMIPLWMFPV-AVTCGNTFVLKPSEKDPGASIMLAELA 226
Y EP GV I P+N+P A+ PL + A+ GNT VLKPSE P S ++A++
Sbjct: 95 YIYYEPYGVVLIIAPWNYPFQLALAPL----IGAIAAGNTAVLKPSELTPNTSKVIAKI- 149
Query: 227 MEAGLPDGVLNIVHGTHDTVNAICD---DANIRAISFVGSNVAGMHIYARASAKGKRVQS 283
+E + + +V G + + D D I F GS G + A+ V
Sbjct: 150 IEETFDEEYVAVVEGGVEENQELLDQKFDY----IFFTGSVRVGKIVMEAAAKHLTPVTL 205
Query: 284 NMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKA 343
+G K+ IV DAN+ + F AGQ C+A V V +S ++K ++ K
Sbjct: 206 ELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVA-PDYVLVHESV--KEKFIKELKE 262
Query: 344 LKVN---AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY--EHGN 398
D G +I+++ +R+ L+ +G IV G
Sbjct: 263 EIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG------------KIVFGGNTDRETL 310
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
+I PTIL +VT D +EEIFGP+L + D+L+EAI+I+ +F+
Sbjct: 311 YIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVE 370
Query: 459 RKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ- 516
+K + G IN + + P+ F G S G +++GK + ++ K++ ++
Sbjct: 371 KKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMG--SYHGKYSFDTFSHKKSILKKS 428
Query: 517 -WRDLP 521
W DLP
Sbjct: 429 TWFDLP 434
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-27
Identities = 91/365 (24%), Positives = 147/365 (40%), Gaps = 29/365 (7%)
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V +Y + EPLGV I +N+P + L A+ GNT VLKPSE P S
Sbjct: 93 DTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTS 152
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
++A+L + L + ++ G + + I F GS G + A+
Sbjct: 153 KLMAKL-LTKYLDPSYVRVIEGGVEVTTELL-KEPFDHIFFTGSPRVGKLVMQAAAENLT 210
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVE 339
+G K+ IV N+ +A F AGQ C+A V V +S +DK +E
Sbjct: 211 PCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPD-YVLV--HRSIKDKFIE 267
Query: 340 RAK-ALKVNAG--TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY-- 394
K A+K G + D ++++ +R+ LI+ G +V G
Sbjct: 268 ALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKD----------HGGKVVYGGEVD 317
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
++ PTI+ + D +EEIFGP+L + ++++E ++ +N F
Sbjct: 318 IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGED 377
Query: 455 GAAARKFQTEIEAGQVGINVPI----PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
+G V IN + LP F G S G ++GK G + ++
Sbjct: 378 KRHKELVLENTSSGAVVINDCVFHLLNPNLP---FGGVGNSGMG--AYHGKYGFDTFSHP 432
Query: 511 KTVTQ 515
K V
Sbjct: 433 KPVLN 437
|
Length = 493 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-27
Identities = 123/441 (27%), Positives = 199/441 (45%), Gaps = 49/441 (11%)
Query: 26 STDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQ-EVVSQLPLTTNEEFKAAV 84
S + L + H + ++ S VINPA ++V + T E + A+
Sbjct: 632 SLSSALLASAHQKWQAAPMLEDPVAAGEMS---PVINPADPRDIVGYVREATPAEVEQAL 688
Query: 85 SAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLE 144
+A A P W TP R ++ + +L+ + L + E GKT +A +V R E
Sbjct: 689 ESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIAEV-R--E 745
Query: 145 VVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCG 204
V+ + Y V + D + R PLG I P+NFP I A+ G
Sbjct: 746 AVDF--------LRYYAGQVRDDFDNDTHR-PLGPVVCISPWNFPLAIFTGQVAAALAAG 796
Query: 205 NTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGS 263
N+ + KP+E+ P + + +EAG+P GV+ ++ G +TV A+ DA +R + F GS
Sbjct: 797 NSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGS 856
Query: 264 N-VAGM---HIYARASAKGKRVQ--SNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317
VA + ++ R +G+ + + G +N IV A + + + A+ F +AGQR
Sbjct: 857 TEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQR 916
Query: 318 CMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEAD----------ADLGPVISKQAKER 367
C AL + +D + +R LK+ G A+ D+GPVI +AK
Sbjct: 917 CSALRVLCL-------QDDVADR--TLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKAN 967
Query: 368 ICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPT-ILTDVTADMECYKEEIFGPVL-- 424
I R IQ+ G + R ++ G F+ PT I D ++ K E+FGPVL
Sbjct: 968 IERHIQAMRAKGRPVFQAARENSE-DWQSGTFVPPTLIELDSFDEL---KREVFGPVLHV 1023
Query: 425 LCMQADSLEEAIKIVNKNQYG 445
+ + L+E I+ +N + YG
Sbjct: 1024 VRYNRNQLDELIEQINASGYG 1044
|
Length = 1318 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 6e-25
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 403 TILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ 462
T+L DV DM +EEIFGPVL ++ EEAI + N +YG A +FT A +
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 463 TEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ AG V IN P F G K S G G G+ YT+ KTV
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREG--GPYGLEEYTRTKTVV 366
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 6e-25
Identities = 93/327 (28%), Positives = 141/327 (43%), Gaps = 61/327 (18%)
Query: 175 EPLGVCAGICPFNFP---AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL 231
+PLGV I P+N+P A+ PL A+ GN ++KPSE P S +LAEL E
Sbjct: 100 QPLGVVGIIVPWNYPLYLALGPL---IAALAAGNRVMIKPSEFTPRTSALLAELLAEYFD 156
Query: 232 PDGVLNIVHGTHDTVNAICDDANI-RAIS--------FVGSNVAGMHIYARASAKGKRVQ 282
D V + A++ A S F GS G H+ RA+A+
Sbjct: 157 ED-----------EVAVVTGGADVAAAFSSLPFDHLLFTGSTAVGRHV-MRAAAE----- 199
Query: 283 SN-------MGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWED 335
N +G K+ I+ PDA++ +A AGQ C+A V V + +
Sbjct: 200 -NLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVA-PDYVLV--PEDKLE 255
Query: 336 KLVERAKA--LKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+ V AKA K+ + D +I+++ R+ L++ GAR++ + G
Sbjct: 256 EFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVI----ELNPAG 311
Query: 394 YEHGN--FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ-----YGN 446
+ + PT++ +VT DM +EEIFGP+L + DSL+EAI +N Y
Sbjct: 312 EDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALY-- 369
Query: 447 GAAIFTSSGAAARKFQTEIEAGQVGIN 473
F A + +G V IN
Sbjct: 370 ---YFGEDKAEQDRVLRRTHSGGVTIN 393
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-23
Identities = 94/345 (27%), Positives = 153/345 (44%), Gaps = 48/345 (13%)
Query: 159 EYVP-NVSNGIDT-YSLREPLGVCAGICPFNFPAMIPLWMFPV--AVTCGNTFVLKPSEK 214
E V N++ +D Y +EPLGV I +N+P + L + P+ A+ GN V+KPSE
Sbjct: 81 EPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYP--LQLTLVPLVGAIAAGNCVVIKPSEV 138
Query: 215 DPGASIMLAELAMEAGLP-----DGVLNIVHGTHDT---VNAICDDANIRAISFVGSNVA 266
P + +LAEL +P + ++ G +T + D I + GS
Sbjct: 139 SPATAKLLAEL-----IPKYLDKECYPVVLGGVEETTELLKQRFD-----YIFYTGSTSV 188
Query: 267 GMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVF 326
G + A+ V +G K+ V ++D +A F AGQ C+A V+
Sbjct: 189 GKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLC 248
Query: 327 VGDSKSWEDKLVERAK-ALKVNAGTEA--DADLGPVISKQAKERICRLIQSGIESGARLL 383
+ ++K VE K LK G + D G +I+ + +R+ + L
Sbjct: 249 ---TPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRL------------KKL 293
Query: 384 LDGRNIVVPGY--EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK 441
L G + + G E +I PT+LTDV +EEIFGP+L + ++L+EAI+ +N
Sbjct: 294 LSGGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINS 353
Query: 442 NQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI----PVPLPF 482
+ +F+++ K + +G V +N I LPF
Sbjct: 354 REKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPF 398
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 2e-22
Identities = 117/450 (26%), Positives = 188/450 (41%), Gaps = 44/450 (9%)
Query: 84 VSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRG- 142
V ++ F S R R+ + L L+ + D + + + GK + FR
Sbjct: 5 VRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGK----PSAESFRDE 60
Query: 143 LEVVEHSCGMATLQMGEY-VP-NVSNGIDTYSLR-----EPLGVCAGICPFNFPAMIPLW 195
+ V+ SC +A ++ ++ P V + T+ + EPLGV I +NFP L
Sbjct: 61 VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFP--FLLS 118
Query: 196 MFPV--AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDA 253
+ PV A+ GN VLKPSE P S +LA+L + L + ++ G A+ +
Sbjct: 119 LEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYLDTKAIKVIEGGVPETTALLEQ- 176
Query: 254 NIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGA 313
I F GS G I A A+ V +G K IV ++ + +A +G
Sbjct: 177 KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236
Query: 314 -AGQRCMALSTVVFVGDSKSWEDKLVERAK-ALKVNAGTEA--DADLGPVISKQAKERIC 369
GQ C+A V+ +S+ L++ K L+ G DL +++ +R+
Sbjct: 237 NNGQACIAPDYVLV---EESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLS 293
Query: 370 RL-----IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424
RL + I G D +N+ +I PTIL D D EEIFGP+L
Sbjct: 294 RLLDDPSVADKIVHGGER--DEKNL---------YIEPTILLDPPLDSSIMTEEIFGPLL 342
Query: 425 LCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFF 483
+ +EE+I+I+N A +FT + R+ E +G V N + +
Sbjct: 343 PIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAIDTL 402
Query: 484 SFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
F G S G ++GK + ++ K V
Sbjct: 403 PFGGVGESGFG--AYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 99.2 bits (247), Expect = 3e-22
Identities = 81/356 (22%), Positives = 135/356 (37%), Gaps = 26/356 (7%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKT---LKDAQGD 138
A+ AA + + R + R + ++ + + +A GK ++ GD
Sbjct: 3 RALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGD 62
Query: 139 V--FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196
R V +S + ++ R P G I FNFP IPL
Sbjct: 63 QVQLRARAFVIYSYRIPHEPGNH--LGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQ 120
Query: 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDDANI 255
A+ GN ++KP ++ L AG LP + +++G T+ A+ N
Sbjct: 121 LAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPNP 180
Query: 256 RAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDAN-MDATLNALAAAGFGAA 314
+ + F GS+ + AK R+ + N ++ PDA +D +
Sbjct: 181 KMVLFTGSSRVAEKL--ALDAKQARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACS 238
Query: 315 GQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374
GQ+C A S ++FV ++ S LVE+ KAL + D LGPV + I +
Sbjct: 239 GQKCTAQS-MLFVPENWSKT-PLVEKLKAL-LARRKLEDLLLGPVQTFTTLAMIAHM--- 292
Query: 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDV-------TADMECYKEEIFGPV 423
G+ LL G+ + + + G + + + E EEIFGP
Sbjct: 293 ENLLGSVLLFSGK--ELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPF 346
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 97.0 bits (241), Expect = 2e-21
Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 22/358 (6%)
Query: 175 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDG 234
EPLGV I +N+P ++ + A++ GN VLKPSE P +S +LA+L +E L
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYLDSS 169
Query: 235 VLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL 294
+ +V G A+ + I + GS+ G I A A+ V +G K+ +V
Sbjct: 170 AVRVVEGAVTETTALLEQ-KWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVD 228
Query: 295 PDANMDATLNALAAAGFGAA-GQRCMALSTVVFVGDSKSWEDKLVERAK-ALKVNAGTEA 352
D ++ T+ + A +G GQ C++ ++ +K + K+++ K L+ G
Sbjct: 229 SDTDLKVTVRRIIAGKWGCNNGQACISPD---YILTTKEYAPKVIDAMKKELETFYGKNP 285
Query: 353 --DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF-IGPTILTDVT 409
D+ +++ +R+ +L+ E +++ G + N I PTIL DV
Sbjct: 286 MESKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK------DRENLKIAPTILLDVP 338
Query: 410 ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469
D EEIFGP+L + ++LEE+ ++ A +FT + +F + AG
Sbjct: 339 LDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGG 398
Query: 470 VGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGV 526
+ +N + + + L F G S G ++GK + ++ K V +R L G S V
Sbjct: 399 IVVNDIAVHLALHTLPFGGVGESGMG--AYHGKFSFDAFSHKKAVL--YRSLFGDSAV 452
|
Length = 484 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 9e-17
Identities = 95/402 (23%), Positives = 164/402 (40%), Gaps = 34/402 (8%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
NL+ G + + S Y +++P + +P T +E V + +Q S + P+
Sbjct: 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNP 58
Query: 103 QR------VMLKLQELIRRDI--DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCG--M 152
+R V ++ +R+ D A I K+ A G+V + +E+ G +
Sbjct: 59 ERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQV 118
Query: 153 ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212
L VP G + R P G A I PFNFP IP A+ GN +LK
Sbjct: 119 RFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178
Query: 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYA 272
K L G+P ++++H T+N I +AN R F GS+ +
Sbjct: 179 SKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLAL 238
Query: 273 RASAKGKRVQSNMGAKNHGIVLPD-ANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSK 331
K K + K I+ PD +++D + +GQ+C A S ++F +
Sbjct: 239 ELHGKVKLEDAGFDWK---ILGPDVSDVDYVAWQCDQDAYACSGQKCSAQS-ILFA--HE 292
Query: 332 SWEDK-LVERAKALKVNAGTEADADLGPVIS---KQAKERICRLIQSGIESGARLLLDGR 387
+W ++++ KAL E D +GPV++ ++ + + +L+ GA++L G+
Sbjct: 293 NWVQAGILDKLKALAEQRKLE-DLTIGPVLTWTTERILDHVDKLLAI---PGAKVLFGGK 348
Query: 388 NI-------VVPGYEHGNFIGPTILTDVTADMECYKEEIFGP 422
+ + YE P + + E E+FGP
Sbjct: 349 PLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGP 390
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 2e-15
Identities = 92/395 (23%), Positives = 142/395 (35%), Gaps = 59/395 (14%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFR 141
AA +AA AF S+R R + + + I D+L E G QG++ R
Sbjct: 3 AAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGR 62
Query: 142 GL--------EVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFP-AMI 192
V E S A + + D + PLG A NFP A
Sbjct: 63 TTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLA-- 120
Query: 193 PLWMFPV-------AVTCGNTFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHG 241
F V A+ G V+K PG S ++A A GLP GV +++ G
Sbjct: 121 ----FSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQG 176
Query: 242 T-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK--GKRVQSNMGAKNHGIVLPDAN 298
+ A+ I+A+ F GS G ++ A+A+ + +G+ N +LP A
Sbjct: 177 GGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGA- 235
Query: 299 MDATLNALAAAGFGA----AGQRCMALST---VVFVGDSKSWEDKLVERAKALKVNAGTE 351
+ A+A G+ AGQ C T +V V + D +
Sbjct: 236 LAERGEAIAQGFVGSLTLGAGQFC----TNPGLVLVPAGPA-GDAFIAALAE------AL 284
Query: 352 ADADLGPVISKQAKERICRLIQSGIE-----SGARLLLDGRNIVVPGYEHGNFIGPTILT 406
A A +++ I + G+E G R+L G G + +
Sbjct: 285 AAAPAQTMLT----PGIAEAYRQGVEALAAAPGVRVLAGG-AAAEGGNQAAPTLFKVDAA 339
Query: 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK 441
AD +EE+FGP L ++ D E + +
Sbjct: 340 AFLAD-PALQEEVFGPASLVVRYDDAAELLAVAEA 373
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 77.6 bits (191), Expect = 6e-15
Identities = 72/295 (24%), Positives = 116/295 (39%), Gaps = 19/295 (6%)
Query: 178 GVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL-PDGVL 236
GV I FNFP L F A G + KP+ + L +E+GL P+G L
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 237 NIVHGTHDTVNAICDDANIR-AISFVGSNVAGMHIYARAS--AKGKRVQSNMGAKNHGIV 293
++ G+ + D + R ++F GS + A + +G R + + N I+
Sbjct: 206 QLICGS---AGDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAIL 262
Query: 294 LPDAN-----MDATLNALAAAGFGAAGQRCMALSTV-VFVGDSKSWEDKLVERAKALKVN 347
DA D + AGQ+C A+ V V ++ L R + +
Sbjct: 263 GEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLG 322
Query: 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTD 407
E D+GP++S + + + + + + +GA + L G PG G F PT+L
Sbjct: 323 DPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGG-----PGRLDGAFFPPTLLLA 377
Query: 408 VTADMEC-YKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKF 461
+ E FGPV EA ++ + A + TS AR+F
Sbjct: 378 EDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQF 432
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 1e-14
Identities = 82/315 (26%), Positives = 130/315 (41%), Gaps = 36/315 (11%)
Query: 175 EPLGVCAGICPFNFPAMIPLWMFPV--AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
EPLGV +NFP I L + P+ A+ GN VLKPSE P S LA + L
Sbjct: 107 EPLGVVLIFSSWNFP--IGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAA-NIPKYLD 163
Query: 233 DGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
+ ++ G V I F GS G I A+ V +G K I
Sbjct: 164 SKAVKVIEGGPA-VGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCI 222
Query: 293 VLPDA-----NMDATLNALAAAGFGA-AGQRCMALSTVVFVGDSKSWEDKLVERAKALKV 346
V D+ + +N + +G+ AGQ C+A+ V+ + + L+E K+
Sbjct: 223 V--DSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLV---EERFAPILIELLKSTIK 277
Query: 347 NAGTEADADLGP---VISKQAKERICRL-----IQSGIESGARLLLDGRNIVVPGYEHGN 398
E + +++K+ +R+ L + + I G +D + +
Sbjct: 278 KFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGG--SIDEKKL--------- 326
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
FI PTIL + D + EEIFGP+L + +E++I +N FT++
Sbjct: 327 FIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLK 386
Query: 459 RKFQTEIEAGQVGIN 473
R+ +E +G V N
Sbjct: 387 RRILSETSSGSVTFN 401
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-11
Identities = 115/469 (24%), Positives = 197/469 (42%), Gaps = 69/469 (14%)
Query: 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNE--EFKAAVSAAKQ-AFPSWRNT 97
+ + + G + + + + + T EVV++ ++E +F AAV+ A++ P+ R
Sbjct: 1 LQSYVAGQWHAG-TGDGRTLHDAVTGEVVAR---VSSEGLDFAAAVAYAREKGGPALRA- 55
Query: 98 PITTRQR-VMLK--LQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMAT 154
+T +R MLK + L+ R D A++ T G T +D+ D+ G+ + +
Sbjct: 56 -LTFHERAAMLKALAKYLMERKEDLYALSAAT--GATRRDSWIDIDGGIGTLFAYASLGR 112
Query: 155 LQM--------GEYVPNVSNGIDTYSLREPL----GVCAGICPFNFPAMIPLWMFPVAVT 202
++ G+ P +G T+ + L GV I FNFP L F A+
Sbjct: 113 RELPNAHFLVEGDVEPLSKDG--TFVGQHILTPRRGVAVHINAFNFPVWGMLEKFAPALL 170
Query: 203 CGNTFVLKPSEKDPGASIMLAELAM----EAG-LPDGVLNIVHG-THDTVNAI-CDDANI 255
G ++KP+ A+ L E + E+G LP+G L ++ G D ++ + D
Sbjct: 171 AGVPVIVKPAT----ATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHLGEQDV-- 224
Query: 256 RAISFVGSNVAGMHIYARASAKGKRVQSNMGAK--NHGIVLPDAN-----MDATLNALAA 308
++F GS + A + + ++ N A N I+ PDA D + +A
Sbjct: 225 --VAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAR 282
Query: 309 AGFGAAGQRCMALSTVVFV--GDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQ--- 363
AGQ+C A+ FV + + L R + V +GP++S++
Sbjct: 283 EMTVKAGQKCTAIRRA-FVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQRE 341
Query: 364 -AKERICRLIQSG-IESGARLLLDGRNIVVPGYEHGNFIGPTILT--DVTADMECYKEEI 419
+ + L+ + G D +V E G F PT+L D A + E
Sbjct: 342 DVRAAVATLLAEAEVVFGGP---DRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEA 398
Query: 420 FGPVLLCMQADSLEEAIKIVNKNQYGNG---AAIFTSSGAAARKFQTEI 465
FGPV M DSL EAI++ + G G A++ T+ A AR+
Sbjct: 399 FGPVATLMPYDSLAEAIELAAR---GRGSLVASVVTNDPAFARELVLGA 444
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 9e-11
Identities = 103/435 (23%), Positives = 160/435 (36%), Gaps = 62/435 (14%)
Query: 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNI------TTEQGKTLKDA 135
A + AA A P WR+ R R + L+ L R ++ + I TT Q +
Sbjct: 88 ALLDAAHAALPGWRD--AGARARAGVCLEILQR--LNARSFEIAHAVMHTTGQAFMMAFQ 143
Query: 136 QGDVF---RGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLG-------VCAGICP 185
G RGLE V + A +M +P + +PL V GI
Sbjct: 144 AGGPHAQDRGLEAVAY----AYREMSR-IPETAVWEKPQGKNDPLKLKKRFTIVPRGIAL 198
Query: 186 FNFPAMIPLW-MFP---VAVTCGNTFVLKPSEKDPGASIMLA-------ELAMEAGL-PD 233
+ P W +P ++ GN ++KP PGA + LA E+ EAG P+
Sbjct: 199 VIGCSTFPTWNTYPGLFASLATGNPVLVKPH---PGAILPLALTVQVAREVLGEAGFDPN 255
Query: 234 GVLNIVH-GTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
V H+ + D +R I F GSN G + +A+ +V + N I
Sbjct: 256 LVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQ--WLEQNARQAQVYTEKAGVNTVI 313
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-------SKSWEDKLVERAKALK 345
+ + A L LA + +GQ C ++ D KS+++ + A A+
Sbjct: 314 IESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAID 373
Query: 346 VNAGTEADAD--LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPT 403
G A A LG + S RI G +LL I P + P
Sbjct: 374 GLLGDPARATAVLGAIQSPDTLARIAEARALG-----EVLLASTKIEHPEFPGARVRTPL 428
Query: 404 ILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGA---AIFTSSGAAARK 460
+L AD Y +E FGP+ + D A+++ ++ GA +T+
Sbjct: 429 LLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDA 488
Query: 461 FQ--TEIEAGQVGIN 473
Q A + +N
Sbjct: 489 VQEAAWDAAVALSLN 503
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 95/399 (23%), Positives = 149/399 (37%), Gaps = 59/399 (14%)
Query: 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNI--TTEQGKTLKDAQ 136
+ A ++AA+ A P WR+ R V L++ + + ++A + TT Q +
Sbjct: 85 DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQA 144
Query: 137 GDVF---RGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL-----------GVCAG 182
G RGLE V + A +M +P + +PL GV
Sbjct: 145 GGPHAQDRGLEAVAY----AWREMSR-IPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALV 199
Query: 183 ICPFNFPAMIPLW-----MFPVAVTCGNTFVLKPSEKDPGASIMLA-------ELAMEAG 230
I FP W +F T GN ++KP P A + LA E+ EAG
Sbjct: 200 IGCSTFPT----WNGYPGLFASLAT-GNPVIVKPH---PAAILPLAITVQVAREVLAEAG 251
Query: 231 L-PDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK 288
P+ V + +R I F GSN G + A+A+ +V +
Sbjct: 252 FDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWL--EANARQAQVYTEKAGV 309
Query: 289 NHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS-------KSWEDKLVERA 341
N +V ++ A L LA + +GQ C + D KS+++ + A
Sbjct: 310 NTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLA 369
Query: 342 KALKVNAGTEADAD--LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
A+ A A LG + S RI Q G +LL + P +
Sbjct: 370 AAIDGLLADPARAAALLGAIQSPDTLARIAEARQLG-----EVLLASEAVAHPEFPDARV 424
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438
P +L +D Y EE FGP+ + DS + +I++
Sbjct: 425 RTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIEL 463
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 7e-10
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 40/313 (12%)
Query: 178 GVCAGICPFNFPAMIPLW-MFPVAVTCGNTFVLKPSEKDPGASIMLA----ELAMEAG-L 231
GV I FNFPA LW A+ G ++KP+ A+ L + + AG L
Sbjct: 150 GVALFINAFNFPAW-GLWEKAAPALLAGVPVIVKPAT----ATAWLTQRMVKDVVAAGIL 204
Query: 232 PDGVLNIVHGT-HDTVNAI--CDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK 288
P G L++V G+ ++ + D +SF GS + + + + V+ N+ A
Sbjct: 205 PAGALSVVCGSSAGLLDHLQPFD-----VVSFTGSAETAAVLRSHPAVVQRSVRVNVEAD 259
Query: 289 --NHGIVLPDANMDATLNALAAAGFG-----AAGQRCMALSTVVFVGDS--KSWEDKLVE 339
N ++ PDA + L +GQ+C A+ + FV ++ + + L
Sbjct: 260 SLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRI-FVPEALYDAVAEALAA 318
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIE---SGARLLLDGRNIVVPGYEH 396
R V +GP++S+ + ++G+ + A +L DG + +
Sbjct: 319 RLAKTTVGNPRNDGVRMGPLVSRAQLAAV----RAGLAALRAQAEVLFDGGGFALVDADP 374
Query: 397 --GNFIGPTIL--TDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
+GPT+L +D A + E+FGPV + A+ + + Q A++++
Sbjct: 375 AVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYS 434
Query: 453 SSGAAARKFQTEI 465
A E+
Sbjct: 435 DDAAFLAAAALEL 447
|
Length = 521 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 77/309 (24%), Positives = 124/309 (40%), Gaps = 39/309 (12%)
Query: 178 GVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM----EAG-LP 232
GV I FNFP L A G ++KP+ A+ L E + E+G LP
Sbjct: 150 GVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPA----TATAYLTEAVVRLIVESGLLP 205
Query: 233 DGVLNIVHG-THDTVNAI-CDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK-- 288
+G L ++ G D ++ + D ++F GS + A + V A
Sbjct: 206 EGALQLICGSAGDLLDHLDGQDV----VTFTGSAATAQKLRAHPNVVANSVPFTAEADSL 261
Query: 289 NHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKA 343
N I+ PDA D + + AGQ+C A+ V ++ D ++E +A
Sbjct: 262 NAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRA-IV--PRALVDAVIEALRA 318
Query: 344 L--KVNAGTEADAD--LGPVISKQAKERICRLIQSGIESGARLL--LDGRNIVVPGYEHG 397
KV G +G + S + +E + + + + + + D +V E G
Sbjct: 319 RLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKG 378
Query: 398 NFIGPTILT--DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNG---AAIFT 452
F PT+L D + E FGPV M D L+EAI++ + G G A++ T
Sbjct: 379 AFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAAR---GKGSLVASLVT 435
Query: 453 SSGAAARKF 461
+ AR+
Sbjct: 436 ADPEVAREL 444
|
Length = 675 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.97 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.77 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.65 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.97 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.61 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.67 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.19 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.85 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.81 | |
| PLN02926 | 431 | histidinol dehydrogenase | 96.6 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.58 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.51 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.48 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 95.74 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 93.75 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 83.36 |
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-109 Score=894.86 Aligned_cols=507 Identities=84% Similarity=1.315 Sum_probs=467.4
Q ss_pred hcccccccccccccccccccccccc----CCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHH
Q 009407 11 VRNLKAVRPQIFAKFSTDAKLYSKQ----HNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSA 86 (535)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~ 86 (535)
-||||+++|+.|+..+++++--.+. ..+..+++||||+|+.+.+++.++++||+||+++++++.++.+|+++|+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~a 159 (604)
T PLN02419 80 GNNLRPLRPQFLALRSSWLSTSPEQSTQPQMPPRVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSA 159 (604)
T ss_pred CCCccccchHHHhhhhhhhccCCCcccCcccccccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 3899999999998777766543322 225568899999999876667899999999999999999999999999999
Q ss_pred HHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCC
Q 009407 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSN 166 (535)
Q Consensus 87 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~ 166 (535)
|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.|+..+++.+++++.......++..+....
T Consensus 160 A~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~ 239 (604)
T PLN02419 160 AKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSN 239 (604)
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998877666554442223
Q ss_pred CceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHH
Q 009407 167 GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV 246 (535)
Q Consensus 167 ~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~ 246 (535)
+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+.+.+
T Consensus 240 ~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~ 319 (604)
T PLN02419 240 GVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTV 319 (604)
T ss_pred CccceEEecCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHH
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999977888
Q ss_pred HHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEE
Q 009407 247 NAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVF 326 (535)
Q Consensus 247 ~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv 326 (535)
+.|+.|++|++|+||||+.+|+.|++.++.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||
T Consensus 320 ~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V 399 (604)
T PLN02419 320 NAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVF 399 (604)
T ss_pred HHHHhCCCCCEEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEe
Q 009407 327 VGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT 406 (535)
Q Consensus 327 ~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~ 406 (535)
++++|+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++|+++||++++||......+...|+|++|||+.
T Consensus 400 ~~~~d~f~e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~ 479 (604)
T PLN02419 400 VGDAKSWEDKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILS 479 (604)
T ss_pred eCcHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEe
Confidence 76689999999999999999999999999999999999999999999999999999999975321112468999999999
Q ss_pred cCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCcc
Q 009407 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFT 486 (535)
Q Consensus 407 ~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfG 486 (535)
++++||.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+......+.+|||
T Consensus 480 ~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFG 559 (604)
T PLN02419 480 GVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFT 559 (604)
T ss_pred CCCCCCHHHcCCCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998754445789999
Q ss_pred CCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 487 GSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 487 G~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+|.||+|+++++|++|+++||+.|+|+.++
T Consensus 560 G~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 560 GNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred CcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 9999999964579999999999999998765
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-108 Score=831.58 Aligned_cols=471 Identities=35% Similarity=0.538 Sum_probs=448.1
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.++||||+|+++.+++++++.||+||+++++|+.++.+||+.+|++||+||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 4789999999998999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
.|+...+.+.|||..+++ .++..+++.+||++.+++...+...+ ...+...++.++|+|||+.|.|||||+.+..|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~-~~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIP-TDGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCC-CCCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999998 89999999999999999887655544 4456678999999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
+|||++||+||+||++.+|+|+..+++++.++|+|+|++|+|+| +.+.+.+|.+|++|++|+||||+.+|+.|++++++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999 67899999999999999999999999999998884
Q ss_pred -CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCC
Q 009407 277 -KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEAD 353 (535)
Q Consensus 277 -~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~ 353 (535)
++|++++|||||+|.||++|||+|.|++.++.+.|+|+||.|++.+|++|+++ +|+|+++++++.++ +++|||.|++
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~ 339 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG 339 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence 58999999999999999999999999999999999999999999999977777 89999999999966 9999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+..||.+++.|++|+.+||+.++++||++++||.+.. +.|+|+.|||+.++.++|.+++||+||||++|++|++.|
T Consensus 340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g----~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~e 415 (501)
T KOG2450|consen 340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLG----DKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEE 415 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccC----CCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHH
Confidence 9999999999999999999999999999999997632 689999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|+|+++|++.|||+++|||+|.++++++++++++|+||||+...+ ...+||||+|.||+| |+.|.+++++||+.|+|
T Consensus 416 E~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~-~~~~PfgG~K~SG~G--RE~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 416 EVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVF-DAQVPFGGFKMSGIG--RELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccc-cccCCccccccccCC--ccccHHHHhhcceeeEE
Confidence 999999999999999999999999999999999999999998654 478999999999999 57999999999999999
Q ss_pred EeccCC
Q 009407 514 TQQWRD 519 (535)
Q Consensus 514 ~~~~~~ 519 (535)
+++..+
T Consensus 493 ~v~~~~ 498 (501)
T KOG2450|consen 493 TVKLPQ 498 (501)
T ss_pred EEeCCC
Confidence 987643
|
|
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-107 Score=791.00 Aligned_cols=470 Identities=31% Similarity=0.484 Sum_probs=450.6
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
-+.||+|+|+.+.++++|+|.||++|++|+.++..+.++.+.|+++|++||++|+.++..+|..+|+++.++|.+|.++|
T Consensus 24 ~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddL 103 (503)
T KOG2451|consen 24 AQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDL 103 (503)
T ss_pred hhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHH
Confidence 46699999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+.++++|.|||+.||++|+..+..+++||++.+++..++..+.........+.++|+||+++|+|||||.++..++..+|
T Consensus 104 a~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gAA 183 (503)
T KOG2451|consen 104 ATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGAA 183 (503)
T ss_pred HHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999988866777888999999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC----hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT----HDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~----~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
|++||+||+|||+.||++++.++++..+||+|+|++|+|+++ .+.+..|+.+|+|+.|+||||+.+|+.++++++.
T Consensus 184 LAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsas 263 (503)
T KOG2451|consen 184 LAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSAS 263 (503)
T ss_pred HhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999963 3688999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
..|++.+|||||.|+||++|||+|.|++.....+|.|+||.|.+..|+|||++ +|+|+.+|.++++++++||.+|+++.
T Consensus 264 tvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt 343 (503)
T KOG2451|consen 264 TVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTT 343 (503)
T ss_pred hhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
.||||+..+.++++.++++|+++||++++||+.... ..++|++|||+.+|+.+|-+.+||+|||+.+|++|+|+||+
T Consensus 344 ~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~---lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEv 420 (503)
T KOG2451|consen 344 QGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSE---LGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEV 420 (503)
T ss_pred cCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccc---cCCccccceEeecCCccceeeccccccccceeeeeCCHHHH
Confidence 999999999999999999999999999999985431 24599999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++.||++|+||+|.++..+++++|++|+|-+|... .++...||||+|+||+| |+++++|+++|+..|.+++
T Consensus 421 i~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNegl-is~~~~pFGGVKeSG~G--REgskyGidey~~ik~ici 497 (503)
T KOG2451|consen 421 IEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGL-ISDAEAPFGGVKESGFG--REGSKYGIDEYLVIKYICI 497 (503)
T ss_pred HHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccce-ecccccCcCCccccccC--ccccccchhhhhhhheeee
Confidence 99999999999999999999999999999999999999875 34578999999999999 5799999999999999886
Q ss_pred c
Q 009407 516 Q 516 (535)
Q Consensus 516 ~ 516 (535)
.
T Consensus 498 g 498 (503)
T KOG2451|consen 498 G 498 (503)
T ss_pred c
Confidence 3
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-104 Score=843.34 Aligned_cols=467 Identities=30% Similarity=0.485 Sum_probs=439.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999976567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++...+...++..+....+...+++++|+|||++|+|||||++++++++++||
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766554443222344567899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ .+.++.|++||+|+.|+||||+++|+.|++.++.+++|
T Consensus 172 aaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~l~~ 251 (482)
T PRK11241 172 AAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKK 251 (482)
T ss_pred HhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999984 57889999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|+++++++|||
T Consensus 252 ~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpl 331 (482)
T PRK11241 252 VSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPL 331 (482)
T ss_pred EEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999999999999999999999988877 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++++.++|++|+++|+++++||...+ .+|+|++|||+.++++||++++||+||||++|++|+|+||||+++
T Consensus 332 i~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~----~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~a 407 (482)
T PRK11241 332 IDEKAVAKVEEHIADALEKGARVVCGGKAHE----LGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQA 407 (482)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEecCCCCC----CCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHh
Confidence 9999999999999999999999999996531 258999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 440 NKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 440 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|||++||||+|.++++++++++++|+||||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+.
T Consensus 408 N~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 408 NDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII-SNEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCC-CCCCCCcCCccccccC--cccHHHHHHHhhcceEEEE
Confidence 99999999999999999999999999999999998754 3457899999999999 5799999999999999864
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-103 Score=833.33 Aligned_cols=464 Identities=40% Similarity=0.620 Sum_probs=439.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+...+ +++++||+||+++++++.++.+|+++|+++|+.||+.|+++++.+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999998654 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||+.+++.|+..+++.++|++...+.+.++..+ ...+...++.++|+|||++|+|||||+++.+++++|||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP-TDKGSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccC-CCCCcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999998877766543 22267789999999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 9999999999999999999999999999999999999999 556889999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCCCCcCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEADADLGP 358 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gp 358 (535)
+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+||+++ +|+|+++|.++ ++ +++|||.|+.+++||
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp 317 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP 317 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence 9999999999999999999999999999999999999999999988888 89999999999 65 999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|++++.||+ .. . |+|++|||+.++++||++++||+||||++|++|+|+||||++
T Consensus 318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~-~~----~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 318 LISEEQLDRVEGYIEDAVAEGARLLAGGK-RP----G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCc-CC----C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 99999999999999999999999999987 21 2 999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|||+++|||+|..++.++++++++|+||||+... ...+.+||||+|.||+| +++|.+++++|++.|+|..++
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G--~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLG--REGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCC--ccchHHHHHHHhcceEEEEec
Confidence 999999999999999999999999999999999998753 45578999999999999 578999999999999998765
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-101 Score=826.90 Aligned_cols=473 Identities=32% Similarity=0.483 Sum_probs=441.5
Q ss_pred CCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHH
Q 009407 37 NPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIR 114 (535)
Q Consensus 37 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 114 (535)
.++.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+
T Consensus 17 ~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 96 (501)
T PLN02766 17 EIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIE 96 (501)
T ss_pred CcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHH
Confidence 34556789999999876678899999999999999999999999999999999998 5999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhH
Q 009407 115 RDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193 (535)
Q Consensus 115 ~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 193 (535)
+++++|++++++|+|||..+++ .|+..+++.+++++.......++.++ ...+...++.++|+|||++|+|||||+.+.
T Consensus 97 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 175 (501)
T PLN02766 97 EHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLK-MSRQLQGYTLKEPIGVVGHIIPWNFPSTMF 175 (501)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceEEEEeccceEEEEECCCCChHHHH
Confidence 9999999999999999999997 49999999999999877666555433 223345678899999999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|+.|++
T Consensus 176 ~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 176 FMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 5678899999999999999999999999999
Q ss_pred HHh-cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCC
Q 009407 273 RAS-AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGT 350 (535)
Q Consensus 273 ~a~-~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~ 350 (535)
.++ .+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~ 335 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPF 335 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 998 589999999999999999999999999999999999999999999999988777 899999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC
Q 009407 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD 430 (535)
Q Consensus 351 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~ 430 (535)
|+++++|||+++.+++++.++|++++.+|+++++||.... ..|+|++|||+.++++||++++||+||||++|++|+
T Consensus 336 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~ 411 (501)
T PLN02766 336 DPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCG----DKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFK 411 (501)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCC----CCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeC
Confidence 9999999999999999999999999999999999996532 368999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+... ..+.+||||+|.||+| +++|++|+++||+.
T Consensus 412 ~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~ 488 (501)
T PLN02766 412 TVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFA-FDPDCPFGGYKMSGFG--RDQGMDALDKYLQV 488 (501)
T ss_pred CHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhce
Confidence 99999999999999999999999999999999999999999998653 4578999999999999 57999999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+..+
T Consensus 489 k~v~~~~ 495 (501)
T PLN02766 489 KSVVTPL 495 (501)
T ss_pred EEEEEec
Confidence 9998754
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-100 Score=827.57 Aligned_cols=505 Identities=30% Similarity=0.441 Sum_probs=459.4
Q ss_pred hhhHhhccccccccccccccccccccccccCCC----CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHH
Q 009407 6 ASIQRVRNLKAVRPQIFAKFSTDAKLYSKQHNP----PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFK 81 (535)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~ 81 (535)
+++-|.+.-...+++++--|+|......+.-++ ..+++||||+|+.+.++.+++++||+||+++++++.++.+|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~ 98 (538)
T PLN02466 19 SALLRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVN 98 (538)
T ss_pred HHHhhhccccCCCCccccccccccccccCcCCCccccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHH
Confidence 345555556667777777777755444433332 2347899999998766789999999999999999999999999
Q ss_pred HHHHHHHHhchh--ccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcC
Q 009407 82 AAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMG 158 (535)
Q Consensus 82 ~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 158 (535)
+|+++|++||+. |+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++.+.....+
T Consensus 99 ~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g 178 (538)
T PLN02466 99 RAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHG 178 (538)
T ss_pred HHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999984 9999999999999999999999999999999999999999996 5999999999999988776665
Q ss_pred ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceec
Q 009407 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238 (535)
Q Consensus 159 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~v 238 (535)
..++ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+
T Consensus 179 ~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~v 257 (538)
T PLN02466 179 LTVP-ADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNV 257 (538)
T ss_pred cccc-cCCCceEEEEEecceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEE
Confidence 5444 223345688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCC
Q 009407 239 VHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQ 316 (535)
Q Consensus 239 v~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ 316 (535)
|+| +.+.++.|+.||+||.|+||||+.+|+.|++.++. +++|+++|||||||+||++|||+|.|++.+++++|.|+||
T Consensus 258 v~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ 337 (538)
T PLN02466 258 VSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQ 337 (538)
T ss_pred EecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCC
Confidence 999 45678899999999999999999999999999984 8999999999999999999999999999999999999999
Q ss_pred CccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCC
Q 009407 317 RCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395 (535)
Q Consensus 317 ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~ 395 (535)
.|++++||||+++ +|+|+++|++++.++++|+|.|+++++||++++.+++++.++|++++++|+++++||...+ .
T Consensus 338 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~----~ 413 (538)
T PLN02466 338 CCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFG----S 413 (538)
T ss_pred CcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCC----C
Confidence 9999999988777 8999999999999999999999999999999999999999999999999999999997532 3
Q ss_pred CCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCC
Q 009407 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475 (535)
Q Consensus 396 ~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~ 475 (535)
.|+|+.|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++
T Consensus 414 ~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~ 493 (538)
T PLN02466 414 KGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCF 493 (538)
T ss_pred CceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEeccC
Q 009407 476 IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518 (535)
Q Consensus 476 ~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~~ 518 (535)
.. .++.+||||+|.||+| +++|++|+++||+.|+|+..+.
T Consensus 494 ~~-~~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~~~~~ 533 (538)
T PLN02466 494 DV-FDAAIPFGGYKMSGIG--REKGIYSLNNYLQVKAVVTPLK 533 (538)
T ss_pred CC-CCCCCCcCCCCcCccC--cccHHHHHHHhcceEEEEEeCC
Confidence 43 4467899999999999 5799999999999999987654
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-101 Score=824.53 Aligned_cols=476 Identities=64% Similarity=1.061 Sum_probs=444.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999987656789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
++++.|+|||..+++.|+..+++.+++++.......++..+....+...+..++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766665544222345578899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+.+.++.|++|++|+.|+||||+.+|+.|++.++++++|+
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~ 241 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRV 241 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCcE
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVI 360 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 360 (535)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++
T Consensus 242 ~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli 321 (478)
T cd07085 242 QALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVI 321 (478)
T ss_pred EecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCc
Confidence 999999999999999999999999999999999999999999988877 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVN 440 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N 440 (535)
++.+++++.++|++++++||++++||.....++.++|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 322 ~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N 401 (478)
T cd07085 322 SPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIIN 401 (478)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999753222223689999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 441 KNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 441 ~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+++|||++||||+|.++++++++++++|+|+||++.....+.+||||+|.||+|+.+++|++|+++||+.|+|+.+|
T Consensus 402 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~~ 478 (478)
T cd07085 402 ANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSRW 478 (478)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEeC
Confidence 99999999999999999999999999999999987554456799999999999954468999999999999997653
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-100 Score=823.20 Aligned_cols=478 Identities=26% Similarity=0.425 Sum_probs=442.5
Q ss_pred cccccCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHH
Q 009407 31 LYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQ 110 (535)
Q Consensus 31 ~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 110 (535)
+......++++++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|++++
T Consensus 11 ~~~~~~~~~~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a 88 (508)
T PLN02315 11 LSEIGLSSRNLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIG 88 (508)
T ss_pred HHHHhcCccccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 3333445677889999999854 57899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcch
Q 009407 111 ELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPA 190 (535)
Q Consensus 111 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 190 (535)
+.|++++++|++++++|+|||..+++.|+..+++.++|+++..+.+.++..+....+...+..++|+|||++|+|||||+
T Consensus 89 ~~l~~~~~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 168 (508)
T PLN02315 89 DALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPC 168 (508)
T ss_pred HHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchH
Confidence 99999999999999999999999999999999999999998877666554442223344567899999999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHH----HHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIM----LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVA 266 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~ 266 (535)
.++++++++||++||+||+|||+.+|.++.. +.++|.++|+|+|++|+++|+.+.++.|+.||+|+.|+||||+.+
T Consensus 169 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~ 248 (508)
T PLN02315 169 AVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKV 248 (508)
T ss_pred HHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999887 678889999999999999997778899999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccc
Q 009407 267 GMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALK 345 (535)
Q Consensus 267 g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~ 345 (535)
|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|++++++++
T Consensus 249 G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 328 (508)
T PLN02315 249 GLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVK 328 (508)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999988777 8999999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceE
Q 009407 346 VNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLL 425 (535)
Q Consensus 346 vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~ 425 (535)
+|+|.++++++|||+++.+++++.+++++++++|+++++||...+ ..|+|++|||+ ++++||++++||+||||++
T Consensus 329 vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~----~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~ 403 (508)
T PLN02315 329 IGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIE----SEGNFVQPTIV-EISPDADVVKEELFGPVLY 403 (508)
T ss_pred CCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCeEEecEEE-ecCCCChHHhCCCcCCEEE
Confidence 999999999999999999999999999999999999999997532 36899999999 6999999999999999999
Q ss_pred EeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh--hcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHH
Q 009407 426 CMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT--EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG 503 (535)
Q Consensus 426 v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~--~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~g 503 (535)
|++|+|+||||+++|+++|||+++|||+|.+.++++++ ++++|+||||+++....+.+||||+|.||+| +++|.+|
T Consensus 404 V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~ 481 (508)
T PLN02315 404 VMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGG--REAGSDS 481 (508)
T ss_pred EEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCC--ccchHHH
Confidence 99999999999999999999999999999999999984 7999999999865544568999999999999 5799999
Q ss_pred HHhchheeEEEecc
Q 009407 504 VNFYTQIKTVTQQW 517 (535)
Q Consensus 504 l~~~t~~k~v~~~~ 517 (535)
+++||+.|+|+.++
T Consensus 482 l~~ft~~k~v~~~~ 495 (508)
T PLN02315 482 WKQYMRRSTCTINY 495 (508)
T ss_pred HHHHhhEEEEEEec
Confidence 99999999998765
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-100 Score=817.89 Aligned_cols=466 Identities=28% Similarity=0.445 Sum_probs=435.3
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
+++||||+|+.+ ++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 467999999975 4678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 199 (535)
++++++|+|||..++. .|+..+++.+++++...+.+.+...+....+...++.|+|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999996 499999999999998777665543221123445688999999999999999999999999999
Q ss_pred hhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 200 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.++.|+.||+|++|+||||+.+|+.|++.++.++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 99999999999 5678899999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||+|.|++.+++++|+|+||.|++++||||+++ +|+|+++|+++++++++|+|+++++++|
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G 319 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG 319 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999988777 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC-CEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESG-ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||+++.+++++.++|++++++| +++++||.... ..|+|+.|||+.++++||++++||+||||++|++|+|+||||
T Consensus 320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKRK----GNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCC----CCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 9999999999999999999999 79999986532 358999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+++.
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCccC--ccchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999998754 3578999999999999 5799999999999999864
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-100 Score=821.07 Aligned_cols=471 Identities=33% Similarity=0.506 Sum_probs=441.2
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
|...++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++
T Consensus 22 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T PLN02278 22 LLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANK 101 (498)
T ss_pred CCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 45567899999997656788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..+++.|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+++.++++
T Consensus 102 ~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i 181 (498)
T PLN02278 102 EDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKV 181 (498)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988776655544422234456788999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+.+|+.|++.++.
T Consensus 182 ~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 261 (498)
T PLN02278 182 GPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261 (498)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999985 4678999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +++|+++|+++++++++|+|++++++
T Consensus 262 ~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~ 341 (498)
T PLN02278 262 TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVT 341 (498)
T ss_pred cCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999988877 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea 417 (498)
T PLN02278 342 QGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHS----LGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417 (498)
T ss_pred CCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence 99999999999999999999999999999986532 25899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+||||+... ..+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 418 i~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~i~~ 494 (498)
T PLN02278 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLI-STEVAPFGGVKQSGLG--REGSKYGIDEYLEIKYVCL 494 (498)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHhheeEEEEE
Confidence 999999999999999999999999999999999999998653 3367899999999999 5799999999999999875
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-100 Score=816.96 Aligned_cols=469 Identities=29% Similarity=0.476 Sum_probs=437.1
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+++|.++|.++|+++++.|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678899999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCC---CCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 119 KLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+|++++++|+|||..++. .|+..+++.+++++.+.+...++..+.. ..+...+++++|+|||++|+|||||+.+++
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 6999999999999988776655443311 122346788999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 45678999999999999999999999999999
Q ss_pred Hhc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 274 ASA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 274 a~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
++. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 996 89999999999999999999999999999999999999999999999988777 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC-
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD- 430 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~- 430 (535)
+++++|||+++.+++++.++|++|+++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~ 401 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVD----RPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDD 401 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCC
Confidence 999999999999999999999999999999999996532 358999999999999999999999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchh
Q 009407 431 -SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQ 509 (535)
Q Consensus 431 -~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~ 509 (535)
|++|||+++|+++|||++||||+|.++++++++++++|.||||++.. ..+.+||||+|.||+| +++|++|+++||+
T Consensus 402 ~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 478 (486)
T cd07140 402 GDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNK-TDVAAPFGGFKQSGFG--KDLGEEALNEYLK 478 (486)
T ss_pred CCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--CcchHHHHHHhhc
Confidence 69999999999999999999999999999999999999999998643 3467899999999999 5799999999999
Q ss_pred eeEEEec
Q 009407 510 IKTVTQQ 516 (535)
Q Consensus 510 ~k~v~~~ 516 (535)
.|+|+..
T Consensus 479 ~k~v~~~ 485 (486)
T cd07140 479 TKTVTIE 485 (486)
T ss_pred EEEEEEe
Confidence 9999764
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-100 Score=819.67 Aligned_cols=475 Identities=34% Similarity=0.550 Sum_probs=443.4
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999976667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++. |+..+++.++++++......++..+ ...+...+++++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIP-LRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 9999999999999999974 9999999999999887766655443 2234456789999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+.+.++.|+.|++||.|+||||+.+|+.|.+.++.+
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~~ 243 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS 243 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999666889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.++++++
T Consensus 244 l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 323 (488)
T PRK13252 244 LKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNF 323 (488)
T ss_pred CCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999988777 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
|||+++.+++++.++|++++.+|+++++||...+......|+|++|||+.+++++|++++||+||||++|++|+|++|||
T Consensus 324 gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai 403 (488)
T PRK13252 324 GPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVI 403 (488)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999965332222468999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+..
T Consensus 404 ~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 404 ARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGE-SPAEMPVGGYKQSGIG--RENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCC-CCCCCCCCCCccCcCC--cCChHHHHHHhcceEEEEEe
Confidence 99999999999999999999999999999999999998643 3467899999999999 57999999999999999876
Q ss_pred c
Q 009407 517 W 517 (535)
Q Consensus 517 ~ 517 (535)
+
T Consensus 481 ~ 481 (488)
T PRK13252 481 M 481 (488)
T ss_pred C
Confidence 5
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-100 Score=815.95 Aligned_cols=467 Identities=31% Similarity=0.497 Sum_probs=436.2
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh-ccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++. |++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 599999998766678999999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCC-----CCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 122 MNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNV-----SNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
+++++|+|||..+++. |+..+++.+++++.+.....++..+.. ..+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 999999999999887766555433211 1123567899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 241 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGRQAA 241 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996568899999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|+|+++
T Consensus 242 ~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 321 (477)
T cd07113 242 SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESV 321 (477)
T ss_pred hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999988777 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++|||+++.+++++.++|++|+++|+++++||.... +.|+|+.|||+.++++||++++||+||||++|++|+|+||
T Consensus 322 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~de 397 (477)
T cd07113 322 MFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALA----GEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEE 397 (477)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHH
Confidence 999999999999999999999999999999996532 3589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.++++++++++++|+|+||.+.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+
T Consensus 398 ai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~ 474 (477)
T cd07113 398 LIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTF-LDPAVPFGGMKQSGIG--REFGSAFIDDYTELKSVM 474 (477)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccccCC--ccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999998653 3468999999999999 578999999999999997
Q ss_pred ec
Q 009407 515 QQ 516 (535)
Q Consensus 515 ~~ 516 (535)
.+
T Consensus 475 ~~ 476 (477)
T cd07113 475 IR 476 (477)
T ss_pred Ee
Confidence 64
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=813.19 Aligned_cols=471 Identities=29% Similarity=0.487 Sum_probs=439.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||++|++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 57999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+++++|+|||+.+++. |+..+++.++++++......+...+ ...+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE-IDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 9999999999999974 9999999999998877665554333 2234567889999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+.++.|++|++|+.|+||||+.+|+.|++.++++++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 99999999999 56788999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCC-----CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 280 RVQSNMGAKNHGIVLPDA-----NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dA-----dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
|+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|++
T Consensus 240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 319 (480)
T cd07559 240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPE 319 (480)
T ss_pred cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999 99999999999999999999999999988777 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++|||+++.+++++.++|++|+++||++++||..........|+|++|||+.++++||++++||+||||++|++|+|++
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 399 (480)
T cd07559 320 TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEE 399 (480)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHH
Confidence 99999999999999999999999999999999976432122468999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|
T Consensus 400 eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~v 476 (480)
T cd07559 400 EAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQ-YPAHAPFGGYKKSGIG--RETHKMMLDHYQQTKNI 476 (480)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCCccCcCC--ccChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999997643 3468999999999999 57899999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.+|
T Consensus 477 ~~~~ 480 (480)
T cd07559 477 LVSY 480 (480)
T ss_pred EEeC
Confidence 8754
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-99 Score=812.66 Aligned_cols=468 Identities=32% Similarity=0.480 Sum_probs=437.6
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh--ccCCCHHHHHHHHHHHHHHHHhc
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+. |++++.++|.++|+++++.|+++
T Consensus 2 ~~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 81 (476)
T cd07142 2 KHTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKH 81 (476)
T ss_pred CcccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHh
Confidence 3457899999997666778999999999999999999999999999999999975 99999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
+++|++++++|+|||..+++. |+..+++.+++++.+.+...+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 82 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~ 160 (476)
T cd07142 82 ADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLP-ADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAW 160 (476)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEeceeeEEEECCCccHHHHHHH
Confidence 999999999999999999864 9999999999999877766555444 22234567889999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 161 ~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~a 240 (476)
T cd07142 161 KVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLA 240 (476)
T ss_pred HHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999994 56889999999999999999999999999999
Q ss_pred hc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 275 SA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 275 ~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++
T Consensus 241 a~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 320 (476)
T cd07142 241 AKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRK 320 (476)
T ss_pred HHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 97 89999999999999999999999999999999999999999999999988777 89999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCH
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~ 432 (535)
++++||++++.+++++.++|++++++|+++++||.... .+|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 321 ~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~ 396 (476)
T cd07142 321 GVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIG----SKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTV 396 (476)
T ss_pred CCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCC----CCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCH
Confidence 99999999999999999999999999999999997532 36899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeE
Q 009407 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512 (535)
Q Consensus 433 ~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~ 512 (535)
+|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+
T Consensus 397 ~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~ 473 (476)
T cd07142 397 DEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDV-FDASIPFGGYKMSGIG--REKGIYALNNYLQVKA 473 (476)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHhhheeE
Confidence 999999999999999999999999999999999999999998643 4568999999999999 5799999999999998
Q ss_pred EE
Q 009407 513 VT 514 (535)
Q Consensus 513 v~ 514 (535)
|+
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-99 Score=810.36 Aligned_cols=470 Identities=29% Similarity=0.468 Sum_probs=437.7
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 46999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+++++|+|||..+++. |+..+++.+++++.......++..+ ...+...+++++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANM-IDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999975 9999999999998776655554333 1234456889999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..++++|.++ +|+|++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999985 99999999998 46788999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999988777 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|+++++||......+.+.|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997543222246899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+..
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQ-IPAGAPFGGYKKSGIG--RETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCccCcCC--CCchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999998653 3467999999999999 57999999999999998753
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-99 Score=809.01 Aligned_cols=470 Identities=31% Similarity=0.498 Sum_probs=440.2
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
+||||+|+.+. +.+++++||+||+++++++.++.+|++.++++|++|++.|++++.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999765 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|+|||..+++.|+..+++.+++++...+.+.++..+....+...+++++|+|||++|+|||||+.++++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766654442223445678999999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHc----CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||+||+|||+.+|.++..++++|.++ |+|+|++|+++|+.+.++.|..|+++|.|+||||+.+|+.|++.++.++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~~ 239 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRF 239 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 999999999999999999999999999 9999999999997668889999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++|
T Consensus 240 ~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (478)
T cd07086 240 GRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVG 319 (478)
T ss_pred CcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999988777 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++|+++|+++++||..... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~ 397 (478)
T cd07086 320 PLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDG--GEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIA 397 (478)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--CCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999975421 12589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhh--cceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTE--IEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~--l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
++|+++|||+++|||+|.+++++++++ +++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 398 ~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G--~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07086 398 INNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTI 475 (478)
T ss_pred HHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCC--ccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999 999999999976545578999999999999 5789999999999999987
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
++
T Consensus 476 ~~ 477 (478)
T cd07086 476 NY 477 (478)
T ss_pred eC
Confidence 64
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-99 Score=806.37 Aligned_cols=465 Identities=26% Similarity=0.446 Sum_probs=433.4
Q ss_pred eecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 009407 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMN 123 (535)
Q Consensus 44 ~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 123 (535)
+|||+|+.+ +..++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 2 ~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 79 (474)
T cd07130 2 VYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKL 79 (474)
T ss_pred eECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999974 468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhc
Q 009407 124 ITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTC 203 (535)
Q Consensus 124 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaa 203 (535)
+++|+|||..++..|+..+++.+++++...+.+.+...+....+...+..++|+|||++|+|||||+.++++++++||++
T Consensus 80 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 159 (474)
T cd07130 80 VSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVC 159 (474)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHc
Confidence 99999999999999999999999999887776655444322234456788999999999999999999999999999999
Q ss_pred CCeeeecCCCCChHHHHHHHHH----HHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 204 GNTFVLKPSEKDPGASIMLAEL----AMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 204 GN~VVlKps~~~~~~~~~l~~~----l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
||+||+|||+.+|.++..++++ |.++|+|+|++|+++|+.+.++.|++|++||+|+||||+.+|+.|++.++++++
T Consensus 160 GN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~~~ 239 (474)
T cd07130 160 GNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFG 239 (474)
T ss_pred CCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhcCC
Confidence 9999999999999999887766 479999999999999987889999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||
T Consensus 240 ~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (474)
T cd07130 240 RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGP 319 (474)
T ss_pred CEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988777 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++|+++|+++++||...+ ..|+|++|||+.++++ |++++||+||||++|++|+|+||||++
T Consensus 320 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 320 LHTKAAVDNYLAAIEEAKSQGGTVLFGGKVID----GPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999997542 3589999999988766 999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhh--cceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTE--IEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~--l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|+++|||+++|||+|.+++++++++ +++|+|+||..+....+.+||||+|.||+| +++|++|+++||+.|+|+++
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGG--RESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCC--ccchHHHHHHHhheEEEEEe
Confidence 99999999999999999999999987 999999999865555578999999999999 57999999999999998876
Q ss_pred c
Q 009407 517 W 517 (535)
Q Consensus 517 ~ 517 (535)
|
T Consensus 473 ~ 473 (474)
T cd07130 473 Y 473 (474)
T ss_pred c
Confidence 5
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=807.26 Aligned_cols=473 Identities=32% Similarity=0.471 Sum_probs=441.2
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhc-----hhccCCCHHHHHHHHHHHHHHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF-----PSWRNTPITTRQRVMLKLQELIR 114 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~ 114 (535)
.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++|+++|++|| +.|++++..+|.++|+++++.|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 3578999999987667889999999999999999999999999999999999 89999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc-C--CCCCceeeeeeccCceEEeecCCCcchh
Q 009407 115 RDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-N--VSNGIDTYSLREPLGVCAGICPFNFPAM 191 (535)
Q Consensus 115 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 191 (535)
+++++|++++++|+|||+.+++.|+..+++.+++++.....+.++... . ...+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 999999999999999999999999999999999999887776554321 0 1123456789999999999999999999
Q ss_pred hHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHH
Q 009407 192 IPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHI 270 (535)
Q Consensus 192 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 270 (535)
+.++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.|++|+.|+||||+.+|+.|
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 246 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 56788999999999999999999999999
Q ss_pred HHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCC
Q 009407 271 YARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 271 ~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p 349 (535)
++.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|
T Consensus 247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 326 (503)
T PLN02467 247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP 326 (503)
T ss_pred HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999988777 89999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
.|+++++|||+++.+++++.++|++++.+|+++++||.... ....|+|++|||+.+++++|++++||+||||++|++|
T Consensus 327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~--~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPE--HLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC--CCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 99999999999999999999999999999999999986532 1135899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchh
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQ 509 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~ 509 (535)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~ 481 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQP-CFCQAPWGGIKRSGFG--RELGEWGLENYLS 481 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCcCC--CcchHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998653 3467899999999999 5799999999999
Q ss_pred eeEEEecc
Q 009407 510 IKTVTQQW 517 (535)
Q Consensus 510 ~k~v~~~~ 517 (535)
.|+++..+
T Consensus 482 ~k~i~~~~ 489 (503)
T PLN02467 482 VKQVTKYI 489 (503)
T ss_pred eEEEEEec
Confidence 99998754
|
|
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-98 Score=804.61 Aligned_cols=476 Identities=55% Similarity=0.947 Sum_probs=444.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.+++.++++||+||+++++++.++.+|++++++.|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999976566789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
++++.|+|||+.+++.|+..+++.+++++.......++..+....+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877776665444222345567889999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+.+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||+
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~v 241 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999999999999999998788899999999999999999999999999999999999
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVIS 361 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~ 361 (535)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++.++|+++|+++++++++|+|.+++++|||+++
T Consensus 242 ~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~ 321 (477)
T TIGR01722 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLIT 321 (477)
T ss_pred EEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCcC
Confidence 99999999999999999999999999999999999999999998777788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHc
Q 009407 362 KQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK 441 (535)
Q Consensus 362 ~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~ 441 (535)
+.+++++.++|++|+++|+++++||........+.|+|+.|||+.+++++|.+++||+||||++|++|+|++|||+++|+
T Consensus 322 ~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~ 401 (477)
T TIGR01722 322 PQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINA 401 (477)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999997532222246899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 442 NQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 442 ~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|||+++|||+|.+.++++++++++|.||||++.....+.+||||+|.||+|+.+++|.+|+++||+.|+|+++|
T Consensus 402 ~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~~ 477 (477)
T TIGR01722 402 SPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTRW 477 (477)
T ss_pred CCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEeC
Confidence 9999999999999999999999999999999987554557899999999999964468999999999999998764
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-98 Score=804.95 Aligned_cols=470 Identities=29% Similarity=0.463 Sum_probs=434.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh-ccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
++||||+|+. ++..++++||+||+++++++.++.+|+++++++|++||+. |+++|.++|.++|+++++.|+++.++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4799999996 4578999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCC-C--CCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 121 AMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNV-S--NGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++++++|+|||..++.. |+..+++.+++++.......++..+.. . .+...+..++|+|||++|+|||||+.+.+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999975 999999999999887765544433211 1 1334678899999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+++| +. +.++.|..|++||.|+||||+.+|+.|++.+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 44 4778899999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|.++++++++|+|.|++
T Consensus 240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 319 (481)
T TIGR03216 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPA 319 (481)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999988777 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCC-CCCCCceeccEEEecCCCCcccccccccccceEEeecCCH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP-GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~-~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~ 432 (535)
+++||++++.+++++.++|++|+++|+++++||...... +..+|+|++|||+.++++||++++||+||||++|++|+|.
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~ 399 (481)
T TIGR03216 320 TNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSE 399 (481)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence 999999999999999999999999999999999653211 1236999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeE
Q 009407 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512 (535)
Q Consensus 433 ~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~ 512 (535)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++||+.|+
T Consensus 400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k~ 476 (481)
T TIGR03216 400 EEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLR-DLRTPFGGSKLSGIG--REGGVHSLEFYTELTN 476 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCC-CCCCCcCCcccCcCC--cCchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999987543 467999999999999 5799999999999999
Q ss_pred EEec
Q 009407 513 VTQQ 516 (535)
Q Consensus 513 v~~~ 516 (535)
|+.+
T Consensus 477 v~~~ 480 (481)
T TIGR03216 477 VCIK 480 (481)
T ss_pred EEEe
Confidence 8753
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-98 Score=806.80 Aligned_cols=471 Identities=31% Similarity=0.503 Sum_probs=438.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46999999987666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHH-HhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMAT-LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+++++|+|||..+++.|+..+++.+++++.... ...++..+ . .+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP-V-DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCcccc-C-CCceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999987766 44444433 1 23456788999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..++++|.++|+|+|++|+++| +.+.++.|+.|++||.|+||||+.+|+.|++.++.+++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~ 239 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK 239 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998 56778899999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (488)
T TIGR02299 240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP 319 (488)
T ss_pred eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988777 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccC---CCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVV---PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
++++.+++++.++|++++++|+++++||..... .....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea 399 (488)
T TIGR02299 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA 399 (488)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHH
Confidence 999999999999999999999999999865321 01135899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 400 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~i~~ 476 (488)
T TIGR02299 400 IEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNV-RHLPTPFGGVKASGIG--REGGTYSFDFYTETKNVAL 476 (488)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHHhceEEEEE
Confidence 999999999999999999999999999999999999998654 3467899999999999 5799999999999999987
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
++
T Consensus 477 ~~ 478 (488)
T TIGR02299 477 AL 478 (488)
T ss_pred ec
Confidence 65
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-98 Score=803.60 Aligned_cols=470 Identities=29% Similarity=0.469 Sum_probs=433.7
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|
T Consensus 1 ~~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 80 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEML 80 (479)
T ss_pred CCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35799999998766788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 199 (535)
+++++.|+|||..++.. |+..+++.+++++.......+...+ ...+...+++++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 81 AVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISE-IDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeec-CCCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999974 9999999999999876655444332 223445678999999999999999999999999999
Q ss_pred hhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 200 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+.||+|+.|+||||+.+|+.|++.++.++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 238 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENI 238 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999998 99999999998 5678899999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCC------CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 279 KRVQSNMGAKNHGIVLPD------ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~d------Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
+|+++|||||||+||++| ||+|.|++.++++. +|+||.|++++|||||++ +|+|+++|+++++++++|+|++
T Consensus 239 ~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~ 317 (479)
T cd07116 239 IPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLD 317 (479)
T ss_pred CeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999998 79999999999865 699999999999988777 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+++++||++++.+++++.++|++++++|+++++||......+...|+|+.|||+.+++ +|++++||+||||++|++|+|
T Consensus 318 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~ 396 (479)
T cd07116 318 TETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKD 396 (479)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCC
Confidence 9999999999999999999999999999999999975321111368999999998875 999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++||++||+.|
T Consensus 397 ~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k 473 (479)
T cd07116 397 EEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHL-YPAHAAFGGYKQSGIG--RENHKMMLDHYQQTK 473 (479)
T ss_pred HHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCcCCCccCcCC--ccChHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999998654 3467899999999999 579999999999999
Q ss_pred EEEecc
Q 009407 512 TVTQQW 517 (535)
Q Consensus 512 ~v~~~~ 517 (535)
+|+++|
T Consensus 474 ~~~~~~ 479 (479)
T cd07116 474 NLLVSY 479 (479)
T ss_pred EEEEeC
Confidence 997654
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-98 Score=803.22 Aligned_cols=469 Identities=36% Similarity=0.582 Sum_probs=436.7
Q ss_pred CCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
+++||||+|+.+. ..++++||+ ||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++
T Consensus 1 ~~~~i~g~~~~~~--~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 78 (473)
T cd07097 1 YRNYIDGEWVAGG--DGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEE 78 (473)
T ss_pred CCceECCEEecCC--CCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4579999999753 347999999 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 199 (535)
|++++++|+|||..+++.|+..+++.+++++.......+...+....+...++.++|+|||++|+|||||+.++++++++
T Consensus 79 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ 158 (473)
T cd07097 79 LARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAP 158 (473)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHH
Confidence 99999999999999999999999999999998777665543332223556788999999999999999999999999999
Q ss_pred hhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 200 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+++..|+.|++|+.|+||||+.+|+.|++.+++++
T Consensus 159 ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~ 238 (473)
T cd07097 159 ALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238 (473)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999994 568899999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|
T Consensus 239 ~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~G 318 (473)
T cd07097 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIG 318 (473)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999988877 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
||+++.+++++.++|++|+++|+++++||...+. ...|+|++|||+.++++++++++||+||||++|++|+|+||||+
T Consensus 319 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 319 PVVSERQLEKDLRYIEIARSEGAKLVYGGERLKR--PDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 9999999999999999999999999999965321 13588999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++|+++|||+++|||+|.++++++++++++|+|+||+++....+.+||||+|.||+|. +++|++|+++||+.|+|.
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~-~~~g~~~l~~f~~~k~v~ 472 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP-REQGEAALEFYTTIKTVY 472 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc-cCCcHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999998764445689999999999993 368999999999999885
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-98 Score=803.47 Aligned_cols=468 Identities=30% Similarity=0.473 Sum_probs=438.5
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
+++||||+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|+++|++++.++|.++|+++++.|++++++|
T Consensus 3 ~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 81 (475)
T PRK13473 3 TKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEF 81 (475)
T ss_pred ccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999999875 5678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 199 (535)
++++++|+|||..++.. |+..+++.+++++...+.+.+...+....+...++.|+|+|||++|+|||||+...++++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~ 161 (475)
T PRK13473 82 ARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAP 161 (475)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHH
Confidence 99999999999999864 99999999999988777665543322223445678899999999999999999999999999
Q ss_pred hhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 200 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+.|++||.|+||||+++|+.|++.++.++
T Consensus 162 ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~~ 240 (475)
T PRK13473 162 ALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSV 240 (475)
T ss_pred HHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999 99999999999 6788899999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.|+++++|
T Consensus 241 ~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~g 320 (475)
T PRK13473 241 KRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELG 320 (475)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999988777 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcC-CEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESG-ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||+++.+++++.++|+++.++| +++++||...+ ..|+|++|||+.++++|+.+++||+||||++|++|+|+||||
T Consensus 321 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai 396 (475)
T PRK13473 321 PLISAAHRDRVAGFVERAKALGHIRVVTGGEAPD----GKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAV 396 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCC----CCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHH
Confidence 9999999999999999999999 99999997532 358999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||+++|||+|.+++.++++++++|+|+||++... .+.+||||+|.||+| +++|.+|+++||+.|+|+.+
T Consensus 397 ~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 397 RWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKQSGYG--KDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCCCCccccccC--ccchHHHHHHHhceEEEEEe
Confidence 999999999999999999999999999999999999987543 467999999999999 57999999999999999887
Q ss_pred c
Q 009407 517 W 517 (535)
Q Consensus 517 ~ 517 (535)
|
T Consensus 474 ~ 474 (475)
T PRK13473 474 H 474 (475)
T ss_pred c
Confidence 6
|
|
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-98 Score=802.51 Aligned_cols=469 Identities=35% Similarity=0.518 Sum_probs=438.1
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHHh
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRR 115 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~ 115 (535)
..+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++ .|+++|.++|.++|+++++.|++
T Consensus 5 ~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~ 84 (481)
T cd07141 5 KYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIER 84 (481)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHH
Confidence 446789999999876678899999999999999999999999999999999998 69999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 116 DIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 116 ~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+.++|++++++|+|||..++ ..|+..+++.+++++...+...+...+ ...+...+.+++|+|||++|+|||||+.+++
T Consensus 85 ~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 163 (481)
T cd07141 85 DRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIP-MDGDFFTYTRHEPVGVCGQIIPWNFPLLMAA 163 (481)
T ss_pred hHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-CCCCceEEEEEeceeEEEEEccChhHHHHHH
Confidence 99999999999999999766 459999999999999877766654443 2233456789999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.|++||.|+||||+.+|+.|++.
T Consensus 164 ~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~ 243 (481)
T cd07141 164 WKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQA 243 (481)
T ss_pred HHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 45778899999999999999999999999999
Q ss_pred Hhc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 274 ASA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 274 a~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|
T Consensus 244 aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 323 (481)
T cd07141 244 AGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFD 323 (481)
T ss_pred hhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 886 89999999999999999999999999999999999999999999999988777 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+++++|||+++.+++++.++|++|+++|+++++||+..+ ..|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 324 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~ 399 (481)
T cd07141 324 PKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHG----DKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKT 399 (481)
T ss_pred CCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCC
Confidence 999999999999999999999999999999999997532 3689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
++|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|
T Consensus 400 ~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k 476 (481)
T cd07141 400 IDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNV-VSPQAPFGGYKMSGNG--RELGEYGLQEYTEVK 476 (481)
T ss_pred HHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCCCCcccCcCC--ccchHHHHHHHhheE
Confidence 9999999999999999999999999999999999999999998653 4578999999999999 579999999999999
Q ss_pred EEEe
Q 009407 512 TVTQ 515 (535)
Q Consensus 512 ~v~~ 515 (535)
+|++
T Consensus 477 ~v~~ 480 (481)
T cd07141 477 TVTI 480 (481)
T ss_pred EEEE
Confidence 9875
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=798.96 Aligned_cols=474 Identities=38% Similarity=0.642 Sum_probs=440.6
Q ss_pred ceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
+||||+|+.+.++++++++||+| ++++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765578899999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++...+...++..+....+...+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766655443222344578899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.|++|+.|+||||+.+|+.|++.++++++|
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999994 45889999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|+|||||+||++|||+|.|++.+++++|+|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||+
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 320 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL 320 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence 9999999999999999999999999999999999999999999988777 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++++.++|++|+.+|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 400 (478)
T cd07131 321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA 400 (478)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999875432222468999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 440 NKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 440 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+++|||+++|||+|.++++++++++++|+|+||+++....+.+||||+|.||+|. +++|.+|+++||+.|+|+.++
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~-~~~g~~~~~~f~~~k~i~~~~ 477 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH-REAGTTALDAFTEWKAVYVDY 477 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC-cCCcHHHHHHhhheEEEEEeC
Confidence 99999999999999999999999999999999999765445789999999999994 357899999999999998754
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-97 Score=795.79 Aligned_cols=468 Identities=34% Similarity=0.495 Sum_probs=436.4
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-hcc-CCCHHHHHHHHHHHHHHHHhcHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SWR-NTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+++||||+|+.+.++..++++||+||+++++++.++.+|+++++++|++||+ .|+ .+|.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 4679999999876667899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..++ ..|+..+++.+++++.+.....++..+ ...+...++.++|+|||++|+|||||+.++++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIE-TDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999765 459999999999999887766554433 2234456789999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||++|.|+||||+.+|+.|++.++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999994 5678999999999999999999999999999885
Q ss_pred -CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 277 -KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 277 -~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 78999999999999999999999999999999999999999999999988887 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++.+|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|++|
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHG----NEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCC----CCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 999999999999999999999999999999997532 3689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~i~ 478 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNL-LHHQVPFGGYKQSGIG--RELGEYALENYTQIKAVH 478 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCC-CCCCCCCCCccccccC--cccHHHHHHHHhCeEEEE
Confidence 9999999999999999999999999999999999999998754 4567999999999999 579999999999999987
Q ss_pred ec
Q 009407 515 QQ 516 (535)
Q Consensus 515 ~~ 516 (535)
.+
T Consensus 479 ~~ 480 (481)
T cd07143 479 IN 480 (481)
T ss_pred Ee
Confidence 53
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-97 Score=797.56 Aligned_cols=470 Identities=34% Similarity=0.551 Sum_probs=439.0
Q ss_pred eecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 44 ~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
||||+|+.+.++.+++++||+||+++++++.++.+|++++++.|++|++ .|++++.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999765567899999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++...+...++..+ ...+...+++++|+|||++|+|||||++++++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD-VPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877665554433 22455678999999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+. +.++.|++|+++++|+||||+.+|+.|++.++.+++|
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999854 5889999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||+
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl 319 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence 9999999999999999999999999999999999999999999988777 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++++.++|++++++|+++++||..........|+|++|||+.++++||++++||+||||++|++|+|+||||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 399 (482)
T cd07119 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA 399 (482)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence 99999999999999999999999999975322112368999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 440 NKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 440 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHP-YFAEAPWGGYKQSGIG--RELGPTGLEEYQETKHININL 474 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999998643 3578999999999999 578999999999999998865
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-97 Score=791.95 Aligned_cols=454 Identities=28% Similarity=0.447 Sum_probs=424.1
Q ss_pred CCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHH
Q 009407 55 SEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKD 134 (535)
Q Consensus 55 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 134 (535)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCC
Q 009407 135 AQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214 (535)
Q Consensus 135 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 214 (535)
++.|+..+++.+++++.......+.... ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999998776554332211 123455688899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeC
Q 009407 215 DPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL 294 (535)
Q Consensus 215 ~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~ 294 (535)
+|.++..+++++.++|+|+|++|+|+|+.+.+..|+.||+||.|+||||+.+|+.|++.++.+++|+++|||||||+||+
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV~ 244 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVL 244 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEEC
Confidence 99999999999999999999999999865556679999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHH
Q 009407 295 PDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQ 373 (535)
Q Consensus 295 ~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~ 373 (535)
+|||+|.|++.+++++|+|+||.|++++|+||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++++
T Consensus 245 ~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~ 324 (462)
T PRK13968 245 NDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVE 324 (462)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999988777 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecC
Q 009407 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453 (535)
Q Consensus 374 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~ 453 (535)
+++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 325 ~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~ 400 (462)
T PRK13968 325 ATLAEGARLLLGGEKIA----GAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTT 400 (462)
T ss_pred HHHHCCCEEEeCCCcCC----CCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcC
Confidence 99999999999987532 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 454 SGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 454 d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
|.+.++++++++++|+|+||+... ..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 401 d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~ft~~k~v~~~ 460 (462)
T PRK13968 401 DETQARQMAARLECGGVFINGYCA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNIQTVWKD 460 (462)
T ss_pred CHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCccccccC--cCchHHHHHHhcceeEEEEe
Confidence 999999999999999999998753 4578999999999999 57999999999999998753
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-97 Score=799.60 Aligned_cols=472 Identities=30% Similarity=0.472 Sum_probs=437.7
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+ +.++.++||+| |+++++++.++.+|++++++.|++|++.|+++|.++|.++|+++++.|+++
T Consensus 30 ~~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 107 (511)
T TIGR01237 30 GKTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERR 107 (511)
T ss_pred ccccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 455678999999964 45799999995 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.+++++.......++..+....+...+++++|+|||++|+|||||+++++++
T Consensus 108 ~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~ 187 (511)
T TIGR01237 108 RHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGM 187 (511)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHH
Confidence 99999999999999999999999999999999998777665443322234556788999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 267 (511)
T TIGR01237 188 TVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAA 267 (511)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4678899999999999999999999999999887
Q ss_pred ------cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 276 ------AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 276 ------~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+
T Consensus 268 ~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~ 347 (511)
T TIGR01237 268 KVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGP 347 (511)
T ss_pred cccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCC
Confidence 578999999999999999999999999999999999999999999999988887 8999999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.++++++||++++.+++++.++|++++++| ++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 348 ~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~ 422 (511)
T TIGR01237 348 TDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAP----SEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIR 422 (511)
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCC----CCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEe
Confidence 9999999999999999999999999999989 8899886421 3689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ...+.+||||+|.||+|+ +++|++|+++|
T Consensus 423 ~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~~ 501 (511)
T TIGR01237 423 AADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS-KAGGPDYLLQF 501 (511)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-cCCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999998753 333568999999999995 35899999999
Q ss_pred hheeEEEecc
Q 009407 508 TQIKTVTQQW 517 (535)
Q Consensus 508 t~~k~v~~~~ 517 (535)
|+.|+|+.+|
T Consensus 502 ~~~k~v~~~~ 511 (511)
T TIGR01237 502 MQPKTVTENI 511 (511)
T ss_pred cceEEEEEeC
Confidence 9999998765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-97 Score=800.22 Aligned_cols=473 Identities=37% Similarity=0.540 Sum_probs=440.0
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|+++
T Consensus 30 ~~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 107 (512)
T cd07124 30 GREYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRR 107 (512)
T ss_pred ccccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 456788999999964 46899999998 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.+++++.......++..+ ...+...+++++|+|||++|+|||||+.+.+++
T Consensus 108 ~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 186 (512)
T cd07124 108 RFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVE-MVPGEDNRYVYRPLGVGAVISPWNFPLAILAGM 186 (512)
T ss_pred HHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEEecceEEEEECCCChHHHHHHHH
Confidence 9999999999999999999999999999999999887766554443 233556789999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.+..|+.|++++.|+||||+.+|+.|++.++
T Consensus 187 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 266 (512)
T cd07124 187 TTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAA 266 (512)
T ss_pred HHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4577899999999999999999999999999988
Q ss_pred c------CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 276 A------KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 276 ~------~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
. +++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+
T Consensus 267 ~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~ 346 (512)
T cd07124 267 KVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGD 346 (512)
T ss_pred cccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCC
Confidence 6 69999999999999999999999999999999999999999999999988777 8999999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.|+++++||++++.+++++.++|++++. |+++++||..... .+.|+|+.|||+.++++||++++||+||||++|++
T Consensus 347 p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~--~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 423 (512)
T cd07124 347 PEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLEL--AAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIK 423 (512)
T ss_pred CCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCC--CCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEe
Confidence 99999999999999999999999999988 8999999975421 13689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+... ...+.+||||+|.||+|. +++|++|+++|
T Consensus 424 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~~~~~ 502 (512)
T cd07124 424 AKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGS-KAGGPDYLLQF 502 (512)
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCcHHHHHHh
Confidence 9999999999999999999999999999999999999999999998753 334679999999999994 35789999999
Q ss_pred hheeEEEecc
Q 009407 508 TQIKTVTQQW 517 (535)
Q Consensus 508 t~~k~v~~~~ 517 (535)
|+.|+|+++|
T Consensus 503 t~~k~v~~~~ 512 (512)
T cd07124 503 MQPKTVTENF 512 (512)
T ss_pred ccEEEEEEeC
Confidence 9999998765
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-97 Score=799.80 Aligned_cols=474 Identities=25% Similarity=0.357 Sum_probs=435.8
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHH-h
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR-R 115 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~ 115 (535)
+.++++||||+|+.+ ++.+++++||+| |+++++++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|+ +
T Consensus 29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~ 107 (533)
T TIGR01236 29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGP 107 (533)
T ss_pred CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhh
Confidence 466788999999975 456899999997 8999999999999999999999999999999999999999999999999 5
Q ss_pred cHHHHHHHHHHHhCCChHHhhhh-HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccC-ceEEeecCCCcchhhH
Q 009407 116 DIDKLAMNITTEQGKTLKDAQGD-VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL-GVCAGICPFNFPAMIP 193 (535)
Q Consensus 116 ~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~ 193 (535)
++++|+++++.|+|||+.+++.| +..+++.+++++.....+.++.......+...++.++|+ |||++|+|||||+...
T Consensus 108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~ 187 (533)
T TIGR01236 108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAG 187 (533)
T ss_pred cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHH
Confidence 99999999999999999999886 999999999999877666544321122345678899999 9999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
.+++++|| +||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .+.++.|+.||+|+.|+||||+.+|+.|++
T Consensus 188 ~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 188 NLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 8999999999999999999999999999999999999994 678899999999999999999999999999
Q ss_pred HHhcCCCe------EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccc
Q 009407 273 RASAKGKR------VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALK 345 (535)
Q Consensus 273 ~a~~~~~~------v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~ 345 (535)
.++++++| +++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (533)
T TIGR01236 267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK 346 (533)
T ss_pred HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence 99988874 9999999999999999999999999999999999999999999988777 8999999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC--CEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccc
Q 009407 346 VNAGTEADADLGPVISKQAKERICRLIQSGIESG--ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPV 423 (535)
Q Consensus 346 vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPv 423 (535)
+|+|.|+++++||++++.+++++.++|++++++| +++++||.... ..|+|++|||+.++++||++++||+||||
T Consensus 347 ~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~----~~G~~~~PTvl~~~~~d~~i~~eE~FGPV 422 (533)
T TIGR01236 347 VGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDD----SEGYFVEPTVILSKDPTDPLMVEEIFGPV 422 (533)
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCC----CCCeEEeeEEEecCCCCChhhcccCCCCe
Confidence 9999999999999999999999999999999987 79999986521 35899999999999999999999999999
Q ss_pred eEEeecCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCCCC-CCCCCCccCCCCCCCCCCC
Q 009407 424 LLCMQADS--LEEAIKIV-NKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPIPV-PLPFFSFTGSKASFAGDLN 497 (535)
Q Consensus 424 l~v~~~~~--~~eai~~~-N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~ 497 (535)
++|++|+| ++|||+++ |+++|||+++|||+|.+.+.+++++++ +|+|+||..... ..+.+||||+|.||+|. +
T Consensus 423 l~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~ 501 (533)
T TIGR01236 423 LTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND-K 501 (533)
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc-c
Confidence 99999998 59999999 889999999999999999999999977 999999986533 34678999999999984 4
Q ss_pred cchHHHHHhchheeEEEeccC
Q 009407 498 FYGKAGVNFYTQIKTVTQQWR 518 (535)
Q Consensus 498 ~~g~~gl~~~t~~k~v~~~~~ 518 (535)
++|.+|+++|++.|+++....
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~~ 522 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETFV 522 (533)
T ss_pred cCCHHHHHHhcceEEEEEEcc
Confidence 689999999999999987653
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-97 Score=795.52 Aligned_cols=471 Identities=34% Similarity=0.519 Sum_probs=437.4
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh-ccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++. |+++|.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999998655678999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+ ...+...+..++|+|||++|+|||||+.+++++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP-TSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-CCCCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 9999999999998765 569999999999999887766554443 22344567889999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++.+
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~ 246 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN 246 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 567889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~~~ 355 (535)
++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++||||+++ +|+|+++|++++++ +++|+|++++++
T Consensus 247 ~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~ 326 (484)
T cd07144 247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTV 326 (484)
T ss_pred CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999988777 89999999999985 999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||..... ....|+|++|||+.+++++|++++||+||||++|++|+|++||
T Consensus 327 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ea 405 (484)
T cd07144 327 VGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPE-GLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEA 405 (484)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcc-cCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHH
Confidence 999999999999999999999999999999875321 1136899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 406 i~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 482 (484)
T cd07144 406 IKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSND-SDVGVPFGGFKMSGIG--RELGEYGLETYTQTKAVHI 482 (484)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCC-CCCCCCcCCcccCcCC--CCchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999998754 3477999999999999 5799999999999999876
Q ss_pred c
Q 009407 516 Q 516 (535)
Q Consensus 516 ~ 516 (535)
+
T Consensus 483 ~ 483 (484)
T cd07144 483 N 483 (484)
T ss_pred e
Confidence 4
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-97 Score=793.68 Aligned_cols=466 Identities=35% Similarity=0.523 Sum_probs=435.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhcc--CCCHHHHHHHHHHHHHHHHhcHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWR--NTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~--~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.++||||+|+.+.++..++++||+||+++++++.++.+|++.++++|++|++.|+ +++.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 5679999999766678899999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..++ ..|+..+++.+++++.+.+...++..+ ...+...++.++|+|||++|+|||||++++++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999998665 459999999999998877666555443 2245567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999998 55678899999999999999999999999999987
Q ss_pred -CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 277 -KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 277 -~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 322 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT 322 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999988777 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|++|
T Consensus 323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~----~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 398 (476)
T cd07091 323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHG----SKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDE 398 (476)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCC----CCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHH
Confidence 999999999999999999999999999999997542 3689999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|++++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~ 475 (476)
T cd07091 399 VIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNV-FDAAVPFGGFKQSGFG--RELGEEGLEEYTQVKAVT 475 (476)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--ccchHHHHHHhhceeEEe
Confidence 9999999999999999999999999999999999999998643 4578999999999999 579999999999999885
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-96 Score=792.59 Aligned_cols=466 Identities=28% Similarity=0.389 Sum_probs=429.9
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
.+||||+|+.+. +++++++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~-~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 80 (487)
T PRK09457 2 TLWINGDWIAGQ-GEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELA 80 (487)
T ss_pred CceECCEEecCC-CCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHH
Confidence 469999999753 5679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++.......++... ...+...+++++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 159 (487)
T PRK09457 81 EVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPAL 159 (487)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999887765544443332 12344568899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC-CCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK-GKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~-~~~ 280 (535)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.|++|+.|+||||+++|+.|++.++.+ .++
T Consensus 160 aaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 160 LAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999999999999999999878899999999999999999999999999987655 578
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-h-hHHHHHHHHHHhcccccCCC-CCCCCcC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-S-KSWEDKLVERAKALKVNAGT-EADADLG 357 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~-d~f~~~l~~~~~~l~vG~p~-~~~~~~G 357 (535)
+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ + |+|+++|+++++++++|+|+ ++.+++|
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G 319 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG 319 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence 8999999999999999999999999999999999999999999988888 7 99999999999999999996 7889999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
||+++.+++++.+++++++++|+++++||...+ +.|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 394 (487)
T PRK09457 320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQ----AGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIR 394 (487)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccC----CCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 999999999999999999999999999886432 35799999999 7999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|+++|||+++|||+|.+.++++++++++|+|+||+......+.+||||+|.||+| +++|..+ .+|++.|+++.++
T Consensus 395 ~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~-~~~~~~k~~~~~~ 471 (487)
T PRK09457 395 LANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNH--RPSAYYA-ADYCAYPMASLES 471 (487)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCC--CCCchhH-hhheeeeEEEEec
Confidence 999999999999999999999999999999999999875444567999999999999 5678555 5599999998876
|
|
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-97 Score=792.00 Aligned_cols=460 Identities=33% Similarity=0.509 Sum_probs=432.3
Q ss_pred CeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q 009407 47 GAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITT 126 (535)
Q Consensus 47 g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 126 (535)
|+|+.+.++..++++||+||+++++++.++.+|+++++++|++|++.|++++..+|.++|+++++.|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67887655678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCe
Q 009407 127 EQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNT 206 (535)
Q Consensus 127 e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~ 206 (535)
|+|||..++..|+..+++.+++++.......++..+....+...+++++|+|||++|+|||||+++.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999987776655544422245567888999999999999999999999999999999999
Q ss_pred eeecCCCCChHHH-HHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEe
Q 009407 207 FVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSN 284 (535)
Q Consensus 207 VVlKps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~le 284 (535)
||+|||+.+|.++ ..+.+++.++|+|+|++|+|+| +.+.+..|+.|+.++.|+||||+.+|+.|++.++++++|+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 7899999999999999999998 4678899999999999999999999999999999999999999
Q ss_pred CCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHH
Q 009407 285 MGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQ 363 (535)
Q Consensus 285 lgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~ 363 (535)
||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 320 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES 320 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 999999999999999999999999999999999999999988877 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCC
Q 009407 364 AKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443 (535)
Q Consensus 364 ~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~ 443 (535)
+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++
T Consensus 321 ~~~~v~~~v~~a~~~ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~ 393 (465)
T cd07151 321 QVDGLLDKIEQAVEEGATLLVGGEA-------EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTE 393 (465)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCc-------CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCC
Confidence 9999999999999999999999852 588999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 444 ~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|||+++|||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++||++||+.|++++
T Consensus 394 ~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~~~~ 463 (465)
T cd07151 394 YGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLG--RFNGEWALEEFTTDKWISV 463 (465)
T ss_pred ccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCC--cCChHHHHHHhhceEEEEe
Confidence 999999999999999999999999999999876444467999999999999 5799999999999999875
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-97 Score=793.49 Aligned_cols=464 Identities=35% Similarity=0.556 Sum_probs=433.3
Q ss_pred eecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 009407 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMN 123 (535)
Q Consensus 44 ~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 123 (535)
||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997666788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 124 ITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 124 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
+++|+|||..++ ..|+..+++.+++++...+...+...+. ......+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPL-PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccC-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 6799999999999998777665544331 12244678999999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
+||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.|++||.|+||||+.+|+.|++.++.+++|+
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 9999999999999999999999999999999999999985 678899999999999999999999999999999999999
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVI 360 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 360 (535)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI 319 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence 999999999999999999999999999999999999999999988777 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVN 440 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N 440 (535)
++.+++++.++|++++.+|+++++||..........|+|++|||+.++++||++++||+||||++|++|+|+||||+++|
T Consensus 320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n 399 (467)
T TIGR01804 320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN 399 (467)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence 99999999999999999999999999653322223589999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 441 KNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 441 ~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|
T Consensus 400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHP-YPAEAPWGGYKQSGIG--RENGKAGLAEYTEVK 467 (467)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcccCccC--CCChHHHHHHHhccC
Confidence 9999999999999999999999999999999998754 3467899999999999 578999999999875
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-97 Score=798.11 Aligned_cols=470 Identities=23% Similarity=0.333 Sum_probs=431.2
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHh-c
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRR-D 116 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~ 116 (535)
..+++||||+|+.+ +.+++++||+| |+++++++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++ +
T Consensus 31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 34678999999964 56899999995 99999999999999999999999999999999999999999999999996 8
Q ss_pred HHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccC-ceEEeecCCCcchhhHh
Q 009407 117 IDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL-GVCAGICPFNFPAMIPL 194 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~~ 194 (535)
+++|++++++|+|||+.+++. |+...++.+++++.......+........+...++.++|+ |||++|+|||||+.+..
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 999999999999999999865 7888999999998876665443332222345678899998 99999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++|| +||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .++++.|+.|++|+.|+||||+++|+.|++.
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~ 267 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 6999999999999999999999999999999999999995 4688999999999999999999999999999
Q ss_pred HhcCCC------eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc
Q 009407 274 ASAKGK------RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV 346 (535)
Q Consensus 274 a~~~~~------~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v 346 (535)
++.+++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++
T Consensus 268 aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 347 (522)
T cd07123 268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKM 347 (522)
T ss_pred HHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCcc
Confidence 998877 89999999999999999999999999999999999999999999988777 89999999999999999
Q ss_pred cCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceE
Q 009407 347 NAGTEADADLGPVISKQAKERICRLIQSGIES-GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLL 425 (535)
Q Consensus 347 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~ 425 (535)
|+|+|+++++|||+++.+++++.++|++++++ |+++++||.... +.|+|++|||+.++++||++++||+||||++
T Consensus 348 G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~----~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 348 GDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDD----SVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCC----CCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 99999999999999999999999999999999 999999986421 3589999999999999999999999999999
Q ss_pred EeecCC--HHHHHHHHHcCC-CCcEEEEecCCHHHHHHHHhhc--ceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcc
Q 009407 426 CMQADS--LEEAIKIVNKNQ-YGNGAAIFTSSGAAARKFQTEI--EAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFY 499 (535)
Q Consensus 426 v~~~~~--~~eai~~~N~~~-~gLsa~V~t~d~~~a~~~~~~l--~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~ 499 (535)
|++|+| +||||+++|++. |||++||||+|.+.+.++++++ ++|+||||+.... ..+.+||||+|.||+|+ +++
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg-~~~ 502 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND-KAG 502 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc-ccC
Confidence 999984 799999999985 9999999999999999999996 5999999987533 34678999999999963 478
Q ss_pred hHHHHHhchheeEEEec
Q 009407 500 GKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 500 g~~gl~~~t~~k~v~~~ 516 (535)
|++++++|++.|+++..
T Consensus 503 g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 503 SPLNLLRWVSPRTIKET 519 (522)
T ss_pred CHHHHHHhcceEEEEEe
Confidence 99999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-97 Score=787.48 Aligned_cols=451 Identities=30% Similarity=0.469 Sum_probs=422.3
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~ 215 (535)
|+..+++.+++++.......+...... ..+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 999999999999987665443221101 123456788999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 216 ~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
|.++..++++|.++|+|+|++|+|+++.+.+..|+.|++++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~~ 242 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMP 242 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEECC
Confidence 99999999999999999999999987656778899999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++++.++|++
T Consensus 243 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~ 322 (457)
T PRK09406 243 SADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDD 322 (457)
T ss_pred CCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++++|+++++||...+ ..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|+++|||+++|||+|
T Consensus 323 a~~~Ga~~l~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (457)
T PRK09406 323 AVAAGATILCGGKRPD----GPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRD 398 (457)
T ss_pred HHHCCCEEEeCCCcCC----CCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 9999999999997532 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+|+.
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 399 EAEQERFIDDLEAGQVFINGMTV-SYPELPFGGVKRSGYG--RELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHhhceEEEEe
Confidence 99999999999999999998754 3467999999999999 5789999999999999864
|
|
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-96 Score=789.36 Aligned_cols=467 Identities=31% Similarity=0.479 Sum_probs=435.7
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhc
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
-.+++||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+ .|+.+|.++|.++|+++++.|+++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 97 (494)
T PRK09847 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAH 97 (494)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHh
Confidence 344679999999876678899999999999999999999999999999999997 599999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
+++|++++++|+|||..++. .|+..+++.+++++...+...++..+ ...+...++.++|+|||++|+|||||++++++
T Consensus 98 ~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (494)
T PRK09847 98 AEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVAT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCW 176 (494)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-CCCCceeEEEecceeEEEEECCCccHHHHHHH
Confidence 99999999999999999875 49999999999999887776665444 22344567899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.|+++|.|+||||+.+|+.|.+.+
T Consensus 177 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~a 256 (494)
T PRK09847 177 KLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDA 256 (494)
T ss_pred HHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998 567889999999999999999999999999988
Q ss_pred h-cCCCeEEEeCCCcceeeeCCCC-CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 275 S-AKGKRVQSNMGAKNHGIVLPDA-NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 275 ~-~~~~~v~lelgG~~p~iV~~dA-dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
+ .+++|+++|+|||||.||++|+ |+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.+
T Consensus 257 a~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 336 (494)
T PRK09847 257 GDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLD 336 (494)
T ss_pred hhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 5899999999999999999997 99999999999999999999999999988777 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+++++||++++.+++++.++|++++++| ++++||... ..+.|++|||+.+++++|++++||+||||++|++|+|
T Consensus 337 ~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-----~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 410 (494)
T PRK09847 337 PATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-----GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTS 410 (494)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-----CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCC
Confidence 9999999999999999999999999999 999998652 2478999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+... ..+.+||||+|.||+| +++|.+|+++||+.|
T Consensus 411 ~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k 487 (494)
T PRK09847 411 EEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYND-GDMTVPFGGYKQSGNG--RDKSLHALEKFTELK 487 (494)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCCcccccC--ccchHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999753 3467899999999999 579999999999999
Q ss_pred EEEe
Q 009407 512 TVTQ 515 (535)
Q Consensus 512 ~v~~ 515 (535)
+|+.
T Consensus 488 ~v~~ 491 (494)
T PRK09847 488 TIWI 491 (494)
T ss_pred EEEE
Confidence 9875
|
|
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-96 Score=786.91 Aligned_cols=465 Identities=32% Similarity=0.478 Sum_probs=433.9
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh--ccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
+||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++|++. |+++|.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999997655678999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcC-ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 121 AMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMG-EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
++++++|+|||..++. .|+..+++.+++++...+.... +..+ ...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~ 159 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRP-GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIA 159 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHH
Confidence 9999999999998775 4899999999999987765433 2222 22345568899999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|++.+++++
T Consensus 160 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~ 239 (471)
T cd07139 160 PALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL 239 (471)
T ss_pred HHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999997788899999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++|
T Consensus 240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (471)
T cd07139 240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG 319 (471)
T ss_pred CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999988888 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++++.+|+++++||.... ..+.|+|+.|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 320 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~--~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 397 (471)
T cd07139 320 PLASARQRERVEGYIAKGRAEGARLVTGGGRPA--GLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVR 397 (471)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC--CCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHH
Confidence 999999999999999999999999999987532 113589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++|+++|||+++|||+|.+.+.++++++++|+|+||++. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~ft~~k~i~ 470 (471)
T cd07139 398 IANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR--LDFGAPFGGFKQSGIG--REGGPEGLDAYLETKSIY 470 (471)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC--CCCCCCCCCcccccCC--ccchHHHHHHHhceeEEe
Confidence 999999999999999999999999999999999999875 3578999999999999 579999999999999985
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-96 Score=787.63 Aligned_cols=465 Identities=37% Similarity=0.523 Sum_probs=435.4
Q ss_pred eecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q 009407 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMN 123 (535)
Q Consensus 44 ~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 123 (535)
||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997656788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhc
Q 009407 124 ITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTC 203 (535)
Q Consensus 124 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaa 203 (535)
+++|+|||..+++.|+..+++.+++++.+.....+...+....+...+.+++|+|||++|+|||||+..+++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999887766655444322234567889999999999999999999999999999999
Q ss_pred CCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEE
Q 009407 204 GNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282 (535)
Q Consensus 204 GN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~ 282 (535)
||+||+|||+.+|.++..++++|.++|+|+|++|+++|+. +.++.|+.|++++.|+||||+.+|+.|++.++.+++|++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 9999999999999999999999999999999999999954 578999999999999999999999999999999999999
Q ss_pred EeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCC
Q 009407 283 SNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVIS 361 (535)
Q Consensus 283 lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~ 361 (535)
+|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||+++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 320 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN 320 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence 99999999999999999999999999999999999999999988777 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHc
Q 009407 362 KQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK 441 (535)
Q Consensus 362 ~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~ 441 (535)
+.+++++.++|++++++|+++++||..... ..|+|++|||+.++++||.+++||+||||++|++|+|+||||+++|+
T Consensus 321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~ 397 (468)
T cd07088 321 EAALDKVEEMVERAVEAGATLLTGGKRPEG---EKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELAND 397 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCCCCC---CCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhC
Confidence 999999999999999999999999865321 35899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 442 NQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 442 ~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++|||++||||+|.++++++++++++|+|+||++... .+..||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~p~gG~k~SG~G--~~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 398 SEYGLTSYIYTENLNTAMRATNELEFGETYINRENFE-AMQGFHAGWKKSGLG--GADGKHGLEEYLQTKVVY 467 (468)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccccCC--cCchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999987532 345699999999999 579999999999999885
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-96 Score=787.48 Aligned_cols=467 Identities=27% Similarity=0.415 Sum_probs=431.4
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+.++++||||+|+.+.+++.++++||+||+++++++.++.+|++++++.|++|+++|+.++..+|.++|+++++.|++++
T Consensus 13 ~~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~ 92 (496)
T PLN00412 13 GDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHK 92 (496)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 35668899999997666678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc--CccccC-----CCCCceeeeeeccCceEEeecCCCcch
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM--GEYVPN-----VSNGIDTYSLREPLGVCAGICPFNFPA 190 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~P~GVv~~I~p~N~P~ 190 (535)
++|++++++|+|||..++..|+..+++.+++++....... +..++. ...+...+++++|+|||++|+|||||+
T Consensus 93 ~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 172 (496)
T PLN00412 93 APIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPV 172 (496)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchH
Confidence 9999999999999999999999999999999886654432 222211 011224567899999999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMH 269 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~ 269 (535)
.++++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+ .+.++.|+.|++|+.|.|||| .+|+.
T Consensus 173 ~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~ 251 (496)
T PLN00412 173 NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIA 251 (496)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHH
Confidence 9999999999999999999999999999999999999999999999999984 578899999999999999999 99999
Q ss_pred HHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 270 IYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 270 i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
|++.++ ++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+
T Consensus 252 v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 329 (496)
T PLN00412 252 ISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGP 329 (496)
T ss_pred HHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCC
Confidence 999875 7999999999999999999999999999999999999999999999988777 8999999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.+ ++++||++++.+++++.++|++++.+|+++++||. ..|+|+.|||+.++++||++++||+||||++|++
T Consensus 330 p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~-------~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 401 (496)
T PLN00412 330 PED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWK-------REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIR 401 (496)
T ss_pred Ccc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCC-------CCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEE
Confidence 987 78999999999999999999999999999998764 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++||
T Consensus 402 ~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft 479 (496)
T PLN00412 402 INSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIG--SQGITNSINMMT 479 (496)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccC--CCChHHHHHHhc
Confidence 999999999999999999999999999999999999999999999986444457999999999999 579999999999
Q ss_pred heeEEEecc
Q 009407 509 QIKTVTQQW 517 (535)
Q Consensus 509 ~~k~v~~~~ 517 (535)
+.|+++.++
T Consensus 480 ~~k~i~~~~ 488 (496)
T PLN00412 480 KVKSTVINL 488 (496)
T ss_pred ceEEEEEec
Confidence 999998765
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-96 Score=791.44 Aligned_cols=470 Identities=31% Similarity=0.479 Sum_probs=434.9
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|+++
T Consensus 34 ~~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 34 GQDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 355678999999964 4679999999 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc-CccccCCCCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM-GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
+++|++++++|+|||..+++.|+..+++.+++++....... ++... ...+...+++++|+|||++|+|||||+.++++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 190 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRYFYIPLGVGVVISPWNFPFAIMAG 190 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEEEEecCcEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999987765543 33222 22455678899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 191 ~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 270 (514)
T PRK03137 191 MTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERA 270 (514)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999984 57889999999999999999999999999998
Q ss_pred hc------CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccccc
Q 009407 275 SA------KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVN 347 (535)
Q Consensus 275 ~~------~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG 347 (535)
+. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|
T Consensus 271 a~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g 350 (514)
T PRK03137 271 AKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVG 350 (514)
T ss_pred hcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCC
Confidence 86 68999999999999999999999999999999999999999999999988777 899999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEe
Q 009407 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM 427 (535)
Q Consensus 348 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~ 427 (535)
+|.+++ ++||++++.+++++.++|++++.+ +++++||.... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 351 ~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~ 424 (514)
T PRK03137 351 NPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDD----SKGYFIQPTIFADVDPKARIMQEEIFGPVVAFI 424 (514)
T ss_pred CCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCC----CCceEEeeEEEeCCCCCCHHHhCCCCCceEEEE
Confidence 999998 999999999999999999999887 59999986532 368999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHh
Q 009407 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNF 506 (535)
Q Consensus 428 ~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~ 506 (535)
+|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+... ...+.+||||+|.||+|+ +++|.+|+++
T Consensus 425 ~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~~~l~~ 503 (514)
T PRK03137 425 KAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS-KAGGPDYLLL 503 (514)
T ss_pred ecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999998653 334568999999999994 3689999999
Q ss_pred chheeEEEecc
Q 009407 507 YTQIKTVTQQW 517 (535)
Q Consensus 507 ~t~~k~v~~~~ 517 (535)
||+.|+|+..|
T Consensus 504 ft~~k~v~~~~ 514 (514)
T PRK03137 504 FLQAKTVSEMF 514 (514)
T ss_pred hceEEEEEEeC
Confidence 99999997654
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-96 Score=782.21 Aligned_cols=462 Identities=26% Similarity=0.402 Sum_probs=427.7
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
-++||||+|+.. +.+++++||+||+++++++.++.+|+++++++|++|+ +.++..+|.++|+++++.|++++++|
T Consensus 4 ~~~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~el 78 (472)
T TIGR03250 4 EALRIAGEKVSR--DRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEI 78 (472)
T ss_pred CCceECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 467999999863 5789999999999999999999999999999999875 57899999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccC----CCCCceeeeeeccC-ceEEeecCCCcchhhHhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN----VSNGIDTYSLREPL-GVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-GVv~~I~p~N~P~~~~~~ 195 (535)
++++++|+|||..+++.|+..+++.+++++.......++..+. ...+...++.++|+ |||++|+|||||++++++
T Consensus 79 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~ 158 (472)
T TIGR03250 79 SDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAH 158 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHH
Confidence 9999999999999999999999999999998776555443210 11234567899998 999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.+..|+.|++++.|+||||+.+|+.|++.+
T Consensus 159 ~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 238 (472)
T TIGR03250 159 KIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARA 238 (472)
T ss_pred HHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999984 67889999999999999999999999999987
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.+++
T Consensus 239 ~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 316 (472)
T TIGR03250 239 G--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPS 316 (472)
T ss_pred c--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 5 6899999999999999999999999999999999999999999999988877 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|++
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~-------~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ 389 (472)
T TIGR03250 317 VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR-------DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDID 389 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc-------CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHH
Confidence 99999999999999999999999999999999853 58999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
||++++|+++|||++||||+|.+++.++++++++|+||||+.+....+.+||||+|.||+|+ +.+|.+|+++||+.|+|
T Consensus 390 eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~-~~g~~~~l~~ft~~k~i 468 (472)
T TIGR03250 390 DAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY-KEGVQEAMKSFTNLKTY 468 (472)
T ss_pred HHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC-CCChHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999998764444568999999999995 35679999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.+|
T Consensus 469 ~~~~ 472 (472)
T TIGR03250 469 SLPW 472 (472)
T ss_pred EEeC
Confidence 8764
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-96 Score=782.35 Aligned_cols=445 Identities=33% Similarity=0.531 Sum_probs=418.9
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++.......+...+....+...+..++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999998777666555443222344567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccCC--hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 220 IMLAELAMEAGLPDGVLNIVHGT--HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g~--~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
..++++|.++|+|+|++|+++|+ .+.++.|++|++|+.|+||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999985 5678999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 89999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||.... ..|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 321 ~~Ga~il~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~ 396 (448)
T TIGR01780 321 EKGAKVVTGGKRHE----LGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLA 396 (448)
T ss_pred HCCCEEEeCCCcCC----CCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHH
Confidence 99999999996532 35899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+++++++++++|.||||++.. ..+.+||||+|.||+| +++|.+|+++||+.|
T Consensus 397 ~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 397 TIWRVAEALEYGMVGINTGLI-SNVVAPFGGVKQSGLG--REGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHhCCccEEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHHhccC
Confidence 999999999999999998754 4467899999999999 579999999999875
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-96 Score=782.82 Aligned_cols=456 Identities=29% Similarity=0.461 Sum_probs=428.1
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|+++++
T Consensus 20 ~~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 99 (480)
T cd07111 20 RSFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQR 99 (480)
T ss_pred ccccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999976556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||+.+++. |+..+++.+++++.+.+...+ ....++|+|||++|+|||||+.+.++++
T Consensus 100 ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i 168 (480)
T cd07111 100 LFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWKI 168 (480)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHHH
Confidence 9999999999999999974 999999988888766554321 1345799999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+..|+.|+++|.|+||||+.+|+.|++.++++
T Consensus 169 ~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 248 (480)
T cd07111 169 CPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGT 248 (480)
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++
T Consensus 249 ~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~ 328 (480)
T cd07111 249 GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDM 328 (480)
T ss_pred CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999987777 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 329 gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai 404 (480)
T cd07111 329 GAIVDPAQLKRIRELVEEGRAEGADVFQPGADLP----SKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAV 404 (480)
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHH
Confidence 9999999999999999999999999999886432 368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeE
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~ 512 (535)
+++|+++|||+++|||+|.+.+.++++++++|+|+||+... ..+.+||||+|.||+| +++|++|+++||+.|+
T Consensus 405 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 405 ALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNL-FDAAAGFGGYRESGFG--REGGKEGLYEYLRPSW 477 (480)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCC-CCCCCCcCCcccccCC--ccchHHHHHHHhhccC
Confidence 99999999999999999999999999999999999998754 3467899999999999 5799999999999885
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-96 Score=783.03 Aligned_cols=462 Identities=35% Similarity=0.517 Sum_probs=431.0
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
+||||+|+.+.++.+++++||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 48999999876667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
++++|+|||..+++ .|+..+++.+++++...+....... ....+.+++|+|||++|+|||||++++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999886 4899999999998877655433221 22456789999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.|++++.|+||||+.+|+.|++.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 99999999999999999999999999999999999999985 46889999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||+
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 315 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL 315 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence 9999999999999999999999999999999999999999999988888 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIV 439 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~ 439 (535)
+++.+++++.++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~-~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 394 (466)
T cd07138 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRP-EGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIA 394 (466)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC-CcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999999999986432 112368999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 440 NKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 440 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 395 n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~--~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 395 NDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA--FNPGAPFGGYKQSGNG--REWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC--CCCCCCcCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 9999999999999999999999999999999999853 3568999999999999 578999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=786.12 Aligned_cols=472 Identities=29% Similarity=0.444 Sum_probs=437.2
Q ss_pred CCCCCCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHh
Q 009407 37 NPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRR 115 (535)
Q Consensus 37 ~~~~~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 115 (535)
.|..+++||+|+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|++
T Consensus 15 ~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 92 (500)
T cd07083 15 FGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRR 92 (500)
T ss_pred ccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 3667788999999974 4679999998 699999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc-CCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 116 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
++++|+++++.|+|||..++..|+..+++.+++++.......+.... ....+...+++++|+|||++|+|||||+.+.+
T Consensus 93 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 172 (500)
T cd07083 93 RRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFT 172 (500)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHH
Confidence 99999999999999999999999999999999999887665543221 12235567888999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|++|++|+.|+||||+.+|+.|++.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 173 GMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 56788999999999999999999999999999
Q ss_pred HhcCC------CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc
Q 009407 274 ASAKG------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV 346 (535)
Q Consensus 274 a~~~~------~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v 346 (535)
++++. +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSV 332 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCC
Confidence 98876 999999999999999999999999999999999999999999999988877 89999999999999999
Q ss_pred cCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEE
Q 009407 347 NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLC 426 (535)
Q Consensus 347 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v 426 (535)
|+|.++++++||++++.+++++.++|++++++| ++++||.... ..|+|+.|||+.+++++|++++||+||||++|
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 407 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLE----GEGYFVAPTVVEEVPPKARIAQEEIFGPVLSV 407 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCC----CCCeEEccEEEeCCCCCChHhhCCCCCceEEE
Confidence 999999999999999999999999999999887 9999986532 35899999999999999999999999999999
Q ss_pred eecC--CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHH
Q 009407 427 MQAD--SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAG 503 (535)
Q Consensus 427 ~~~~--~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~g 503 (535)
++|+ |+||||+++|+++|||+++|||+|.+.+.++++++++|+|+||++... ..+.+||||+|.||+|. +++|++|
T Consensus 408 ~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~ 486 (500)
T cd07083 408 IRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA-KTGGPHY 486 (500)
T ss_pred EEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC-cccCHHH
Confidence 9999 999999999999999999999999999999999999999999987533 33578999999999994 3578999
Q ss_pred HHhchheeEEEec
Q 009407 504 VNFYTQIKTVTQQ 516 (535)
Q Consensus 504 l~~~t~~k~v~~~ 516 (535)
+++||+.|+++..
T Consensus 487 l~~~~~~k~~~~~ 499 (500)
T cd07083 487 LRRFLEMKAVAER 499 (500)
T ss_pred HHHhhheeEEEEc
Confidence 9999999998764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-95 Score=780.86 Aligned_cols=465 Identities=30% Similarity=0.397 Sum_probs=428.4
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
+||+|+|+.+ ++++++++||+||+++++++.++.+|+++++++|++|+++|++++.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999875 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|+|||..+++.|+..+++.+++++.......++..... .+...++.++|+|||++|+|||||++++++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENPM-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999987766554444332211 2334678899999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC-CCeE
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK-GKRV 281 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~-~~~v 281 (535)
+||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.||+||.|+||||+++|+.|++.++.+ .+++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~~ 238 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKIL 238 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCcE
Confidence 999999999999999999999999999999999999999878899999999999999999999999999987655 6889
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-h-hHHHHHHHHHHhcccccCC-CCCCCCcCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-S-KSWEDKLVERAKALKVNAG-TEADADLGP 358 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~-d~f~~~l~~~~~~l~vG~p-~~~~~~~Gp 358 (535)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ + |+|+++|+++++++++|+| .|+++++||
T Consensus 239 ~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gp 318 (484)
T TIGR03240 239 ALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGA 318 (484)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccc
Confidence 999999999999999999999999999999999999999999988887 5 9999999999999999997 578899999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
|+++.+++++.+++++++++|+++++||...+ +.|+|++|||+ +++++|.+++||+||||++|++|+|+||||++
T Consensus 319 li~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 393 (484)
T TIGR03240 319 VISLQAAQRLLAAQAKLLALGGKSLLAMRQLD----PGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAI 393 (484)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999886432 35789999999 69999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|||+++|||+|.++++++++++++|+|+||+......+.+||||+|.||+| +++|.++++ |++.|+++.++
T Consensus 394 ~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g--~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 394 ANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNH--RPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCC--CCCchHHHh-heeeeEEEEec
Confidence 99999999999999999999999999999999999876444577999999999999 568877766 99999999886
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-95 Score=777.03 Aligned_cols=452 Identities=34% Similarity=0.488 Sum_probs=423.0
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++.....+.++..+ ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIP-VGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCcccc-CCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 99999999999887777665544 22344567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCC
Q 009407 220 IMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDAN 298 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAd 298 (535)
..+++++.++ +|+|++|+++|+ .+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999995 999999999985 45789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 299 MDATLNALAAAG-FGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 299 l~~Aa~~iv~~~-~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
+|.|++.+++++ |.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++|+
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 318 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK 318 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence 999999999995 9999999999999988777 89999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 398 (456)
T cd07107 319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398 (456)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence 99999999996532211246899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+++
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 399 QAHRTARRVEAGYVWINGSSR-HFLGAPFGGVKNSGIG--REECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHHHhcCcCEEEECCCCC-CCCCCCcCCcccccCC--cCchHHHHHHhhceEEEEEe
Confidence 999999999999999998764 3468999999999999 57899999999999998763
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-95 Score=778.05 Aligned_cols=464 Identities=23% Similarity=0.332 Sum_probs=416.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHh-chhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQA-FPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
++||||+|+.+. +.+++++||+||+++++++.++ +|+++|+++|++| |+.|++++.++|+++|+++++.|++++++|
T Consensus 2 ~~~I~g~~~~~~-~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l 79 (513)
T cd07128 2 QSYVAGQWHAGT-GDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL 79 (513)
T ss_pred ceeECCEEEcCC-CCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999764 5789999999999999999876 8999999999997 799999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC--------ccccCCCCC-ceeeeeecc-CceEEeecCCCcch
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG--------EYVPNVSNG-IDTYSLREP-LGVCAGICPFNFPA 190 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~GVv~~I~p~N~P~ 190 (535)
+++ +.|+|||+.+++.|+..+++.+++++.......+ +..+....+ ...++.++| +|||++|+|||||+
T Consensus 80 a~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 80 YAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred HHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHH
Confidence 995 9999999999999999999999999987665432 222211112 235677999 59999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~ 268 (535)
+++++++++||++||+||+|||+.+|+++..++++|.++| +|+|++|+|+|+. +.+..| +.+++|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~ 235 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAA 235 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999853 333332 5689999999999999
Q ss_pred HHHHHH--hcCCCeEEEeCCCcceeeeCCCCC-----HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHH
Q 009407 269 HIYARA--SAKGKRVQSNMGAKNHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVER 340 (535)
Q Consensus 269 ~i~~~a--~~~~~~v~lelgG~~p~iV~~dAd-----l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~ 340 (535)
.|++.+ +.+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++
T Consensus 236 ~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (513)
T cd07128 236 KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKAR 315 (513)
T ss_pred HHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHH
Confidence 999985 478999999999999999999999 9999999999999999999999999988888 89999999999
Q ss_pred HhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccccc---CCCCCCCceeccEEEecCCCC--cccc
Q 009407 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV---VPGYEHGNFIGPTILTDVTAD--MECY 415 (535)
Q Consensus 341 ~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~g~~~~Ptvl~~v~~d--~~i~ 415 (535)
++++++|+|+|+++++|||+++.+++++.++|++|+++ |++++||.... ..+.+.|+|++|||+.+++++ |.++
T Consensus 316 ~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 394 (513)
T cd07128 316 LAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVH 394 (513)
T ss_pred HHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHH
Confidence 99999999999999999999999999999999999988 99999996531 111236899999999988874 8999
Q ss_pred cccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCCC--------CCCCCCCc
Q 009407 416 KEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPIP--------VPLPFFSF 485 (535)
Q Consensus 416 ~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~~--------~~~~~~pf 485 (535)
+||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++|+ +|+||||+... ...+.+||
T Consensus 395 ~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pf 474 (513)
T cd07128 395 DVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVH 474 (513)
T ss_pred hCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999997 99999998631 22467899
Q ss_pred cCCCCCCCCCCCc-chHHHHHhchheeEEE
Q 009407 486 TGSKASFAGDLNF-YGKAGVNFYTQIKTVT 514 (535)
Q Consensus 486 GG~~~Sg~G~~~~-~g~~gl~~~t~~k~v~ 514 (535)
||+|.||+|+ + +|.+|+++|++.|+|.
T Consensus 475 GG~k~SG~G~--~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 475 GGPGRAGGGE--ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCcccCCCCc--ccccHHHHHHhheeeeee
Confidence 9999999995 4 4799999999999875
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-95 Score=776.77 Aligned_cols=449 Identities=35% Similarity=0.527 Sum_probs=422.5
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCCC----CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNVS----NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+..+++.+++++.....+.++..+... .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999877666654433111 134567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
.+|.++..++++|.++|+|+|++|+++| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 9999999999999999999999999999 467788999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 320 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999988777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++++++|+++++||... .|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 321 i~~a~~~ga~vl~gg~~~------~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 394 (456)
T cd07145 321 VNDAVEKGGKILYGGKRD------EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVF 394 (456)
T ss_pred HHHHHHCCCEEEeCCCCC------CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEE
Confidence 999999999999998642 38999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+|.++++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++|++.|+|+
T Consensus 395 t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~f~~~k~v~ 455 (456)
T cd07145 395 TNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIG--REGVRYTMLEMTEEKTIV 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCC--cCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876544467999999999999 579999999999999885
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-95 Score=774.28 Aligned_cols=447 Identities=27% Similarity=0.411 Sum_probs=418.9
Q ss_pred EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh-ccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS-WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 59 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
+++||+||+++++++.++.+|+++++++|++||+. |+.+|.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCC----CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+.++++.+++++.......+...+.. ..+...++.++|+|||++|+|||||++++++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999987766554433211 1234567899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV 293 (535)
.+|.++..++++|.++|+|+|++|+++|+.+.++.|+.|++|+.|+||||+++|+.|++.++. .+|+++|+|||||+||
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~iV 240 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVIV 240 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceEE
Confidence 999999999999999999999999999977888999999999999999999999999999876 5999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 294 ~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+++++++||++++.+++++.++|
T Consensus 241 ~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 320 (455)
T cd07148 241 DRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWV 320 (455)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHH
Confidence 999999999999999999999999999999988777 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
++++++|+++++||... .|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 321 ~~a~~~Ga~vl~gg~~~------~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t 394 (455)
T cd07148 321 NEAVAAGARLLCGGKRL------SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFT 394 (455)
T ss_pred HHHHhCCCEEEeCCccC------CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEc
Confidence 99999999999998652 478999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+|.+.++++++++++|+|+||+++....+.+||||+|.||+| +++|.+|+++||+.|+++
T Consensus 395 ~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07148 395 KDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYG--TGGIPYTMHDMTQEKMAV 454 (455)
T ss_pred CCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccC--CCchHHHHHHhhceeEEe
Confidence 999999999999999999999976444457899999999999 579999999999999885
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-95 Score=771.37 Aligned_cols=449 Identities=31% Similarity=0.461 Sum_probs=420.6
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh--ccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++||+||+++++++.++.+|+++|++.|++||+. |+. ++++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChH
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 217 (535)
|+..+++.+++++.......+...+ ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIE-PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 9999999999999887766554433 223456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 218 ASIMLAELAME-AGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 218 ~~~~l~~~l~~-aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
++..++++|.+ +|+|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 7999999999998 457889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++++.++|++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++++|+++++||...+. ....|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 319 a~~~ga~~~~~g~~~~~-~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d 397 (455)
T cd07120 319 AIAAGAEVVLRGGPVTE-GLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRD 397 (455)
T ss_pred HHHCCCEEEeCCccCcc-cCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999998754321 12368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~~a~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~~l~~ft~~k~v~ 454 (455)
T cd07120 398 LARAMRVARAIRAGTVWINDWNKL-FAEAEEGGYRQSGLG--RLHGVAALEDFIEYKHIY 454 (455)
T ss_pred HHHHHHHHHhcCcceEEECCCCCC-CCCCCcCCccccccC--ccchHHHHHHHhceeEEe
Confidence 999999999999999999997643 467899999999999 578999999999999985
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-95 Score=774.40 Aligned_cols=453 Identities=35% Similarity=0.557 Sum_probs=425.7
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++...+...++..+ ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVP-LPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeec-cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 99999999999887776555443 22356678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCH
Q 009407 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl 299 (535)
..+.++|.++|+|+|++|+++|+.+.++.|+.|++|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAdl 239 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDADL 239 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCCH
Confidence 99999999999999999999997778899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 009407 300 DATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378 (535)
Q Consensus 300 ~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 378 (535)
|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++.+
T Consensus 240 ~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ 319 (457)
T cd07090 240 ENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQE 319 (457)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999988777 8999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeccccccCC-CCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009407 379 GARLLLDGRNIVVP-GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457 (535)
Q Consensus 379 Ga~v~~gg~~~~~~-~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~ 457 (535)
|+++++||...... ..+.|+|++|||+.++++||++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.
T Consensus 320 Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~ 399 (457)
T cd07090 320 GAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQR 399 (457)
T ss_pred CCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHH
Confidence 99999999753211 12358999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 458 a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
++++++++++|+|+||+... ..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 400 ~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 400 AHRVIAQLQAGTCWINTYNI-SPVEVPFGGYKQSGFG--RENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHhCCcCeEEECCCCC-CCCCCCcCCCccCcCC--ccchHHHHHHHhCeEEEEEe
Confidence 99999999999999998643 3467999999999999 57999999999999999764
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-94 Score=772.76 Aligned_cols=448 Identities=36% Similarity=0.564 Sum_probs=423.9
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+++++.|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChH
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 217 (535)
|+..+++.+++++...+...+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999998877665554442224556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 218 ASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 218 ~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
++..++++|.++|+|+|++|+++| +.+.++.|+.|++|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 999999999999999999999998 4678899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 375 (535)
||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988777 8999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009407 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455 (535)
Q Consensus 376 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~ 455 (535)
+.+|+++++||.. .|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 321 ~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~ 393 (451)
T cd07150 321 VAKGAKLLTGGKY-------DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDL 393 (451)
T ss_pred HhCCCEEEeCCcc-------CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCH
Confidence 9999999999852 488999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 456 ~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 394 ~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 450 (451)
T cd07150 394 QRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFG--REGGEWSMEEFTELKWIT 450 (451)
T ss_pred HHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccC--cCCcHHHHHHhheeeEEe
Confidence 999999999999999999986544578999999999999 578999999999999885
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-94 Score=770.08 Aligned_cols=450 Identities=35% Similarity=0.489 Sum_probs=421.7
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhcc-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhh
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWR-NTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD 138 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 138 (535)
++||+||+++++++.++.+|+++++++|++|++.|. ++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
+..+++.+++++...+...+...+ ...+...+.+++|+|||++|+|||||++++++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIP-LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc-cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 999999999998877666554444 2245567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..++++|.++|+|+|++|+++| +.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999999999999999999 66888999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.| .+++||++++.+++++.++|++++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 8999999999999999999986 689999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||...... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~~ga~~l~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~ 397 (454)
T cd07109 319 ARGARIVAGGRIAEGA-PAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGD 397 (454)
T ss_pred hCCCEEEeCCCcCccc-CCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHH
Confidence 9999999998653211 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 453 (454)
T cd07109 398 RALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHG--REKGLEALYNYTQTKTVA 453 (454)
T ss_pred HHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCC--ccchHHHHHHHhceeEEe
Confidence 99999999999999999876334568999999999999 578999999999999885
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-94 Score=770.41 Aligned_cols=450 Identities=34% Similarity=0.527 Sum_probs=421.1
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|+++++++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcC---ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCCh
Q 009407 140 FRGLEVVEHSCGMATLQMG---EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 216 (535)
..+++.+++++...+.+.+ ...+....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999887765532 2222122355678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 217 GASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 217 ~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
.++..++++|.++|+|+|++|+|+|+ .+.++.|+.||+++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 99999999999999999999999994 56789999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|+|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~ 320 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR 320 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++.+|+++++||..... .+.|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 321 a~~~Ga~~~~gg~~~~~--~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d 398 (456)
T cd07110 321 GKEEGARLLCGGRRPAH--LEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRD 398 (456)
T ss_pred HHhCCCEEEeCCCcccc--cCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCC
Confidence 99999999999875321 1358899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 399 ~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 399 AERCDRVAEALEAGIVWINCSQP-CFPQAPWGGYKRSGIG--RELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHhcceeEEe
Confidence 99999999999999999998753 3578999999999999 578999999999999885
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-94 Score=768.17 Aligned_cols=448 Identities=35% Similarity=0.533 Sum_probs=421.3
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchh--ccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhh
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD 138 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 138 (535)
+||+||+++++++.++.+|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 599999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
+..+++.+++++...+.+.+...+....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999987776655443322234456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..++++|.++|+|+|++|+++|+ .+.++.|+.|++++.|+||||+++|+.|++.++.+++++++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 999999999999999999999985 4688999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 321 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 89999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 322 ~~ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~ 398 (454)
T cd07118 322 AEGATLLLGGERLAS---AAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDID 398 (454)
T ss_pred hCCCEEEeCCCCCCC---CCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHH
Confidence 999999999975421 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++++++++++|.|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 399 ~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G--~~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 399 TALTVARRIRAGTVWVNTFLD-GSPELPFGGFKQSGIG--RELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHHHHhcCcCEEEECCCCC-CCCCCCcCCcccccCC--cCchHHHHHHHhceeEEe
Confidence 999999999999999999764 4578999999999999 579999999999999875
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-94 Score=764.95 Aligned_cols=431 Identities=22% Similarity=0.303 Sum_probs=397.9
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMA 153 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 153 (535)
-...|+++++++|++||++|+.++.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.++|+++..
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999999975 9999999999999876
Q ss_pred HHhcC-cc--ccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC
Q 009407 154 TLQMG-EY--VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230 (535)
Q Consensus 154 ~~~~~-~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 230 (535)
+...+ .. ......+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 64433 11 11111233568899999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHH
Q 009407 231 LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAG 310 (535)
Q Consensus 231 lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~ 310 (535)
+|+|++|+|+|+.+.+..|+. +.+|+|+||||+.+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~ 244 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGK 244 (484)
T ss_pred CCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHH
Confidence 999999999997777788886 8899999999999999999999999999999999999999999999999999999999
Q ss_pred h-hccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccc
Q 009407 311 F-GAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRN 388 (535)
Q Consensus 311 ~-~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 388 (535)
| .|+||.|++++||||+++ +|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||..
T Consensus 245 f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~ 322 (484)
T PLN02174 245 WGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEK 322 (484)
T ss_pred hhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCc
Confidence 9 699999999999988777 8999999999999999999988 78999999999999999999998 789999999864
Q ss_pred ccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhccee
Q 009407 389 IVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAG 468 (535)
Q Consensus 389 ~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G 468 (535)
. ..|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|
T Consensus 323 ~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG 397 (484)
T PLN02174 323 D-----RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAG 397 (484)
T ss_pred C-----CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcc
Confidence 2 35899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 469 QVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 469 ~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
.|+||++... ..+.+||||+|.||+| +++|.+|+++||+.|+|+.+
T Consensus 398 ~v~IN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 398 GIVVNDIAVHLALHTLPFGGVGESGMG--AYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred eEEECCCcCCCCCCCCCCCCcCccccC--ccchHHHHHHhcceEEEEEC
Confidence 9999987533 2367899999999999 57999999999999999865
|
|
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-94 Score=766.24 Aligned_cols=444 Identities=35% Similarity=0.527 Sum_probs=418.4
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++.... .++..+ ...+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIE-DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCcccc-CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999887652 222222 22345678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCH
Q 009407 220 IMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl 299 (535)
..++++|.++ +|+|++|+++|+.+.+..|++|++++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||+
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dADl 236 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVDI 236 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCCH
Confidence 9999999995 999999999997788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 009407 300 DATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378 (535)
Q Consensus 300 ~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 378 (535)
|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++++.+++++++.+
T Consensus 237 ~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 316 (446)
T cd07106 237 DAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAK 316 (446)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999988877 8999999999999999999999999999999999999999999999999
Q ss_pred CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009407 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458 (535)
Q Consensus 379 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a 458 (535)
|+++++||.... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 317 ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~ 392 (446)
T cd07106 317 GAKVLAGGEPLD----GPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERA 392 (446)
T ss_pred CCEEEeCCCcCC----CCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHH
Confidence 999999997532 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 459 ~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 393 ~~~~~~~~~G~v~iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 393 EAVARRLEAGTVWINTHGA-LDPDAPFGGHKQSGIG--VEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHhCCccEEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHhhceeEEe
Confidence 9999999999999999863 4578999999999999 579999999999999885
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-94 Score=776.60 Aligned_cols=467 Identities=27% Similarity=0.393 Sum_probs=429.0
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
.++|.+.|. .++++++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 20 ~~~~~~~~~--~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela 97 (524)
T PRK09407 20 RRLTARVDG--AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELL 97 (524)
T ss_pred HHHHhhcCC--CCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 345666554 356789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCc-cccC-CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE-YVPN-VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ 199 (535)
+++++|+|||..++..|+..+++.+++++.......+. .... .......+..++|+|||++|+|||||++++++++++
T Consensus 98 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ 177 (524)
T PRK09407 98 DLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIP 177 (524)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHH
Confidence 99999999999999999999999999998776554332 2211 111245788999999999999999999999999999
Q ss_pred hhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 200 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.| ++.|+||||+.+|+.|++.++.++
T Consensus 178 ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~~ 255 (524)
T PRK09407 178 ALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRRL 255 (524)
T ss_pred HHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999 45778889986 789999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.++++++|
T Consensus 256 ~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~G 335 (524)
T PRK09407 256 IGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMG 335 (524)
T ss_pred CcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccC
Confidence 999999999999999999999999999999999999999999999988777 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.+++++++++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 336 pli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~---~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 336 SLISEAQLETVSAHVDDAVAKGATVLAGGKARPD---LGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC---CCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 9999999999999999999999999999864321 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC--CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~--~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
++|+++|||++||||+|.++++++++++++|.|+||++.. ...+.+||||+|.||+| +++|.+|+++||+.|+|+.
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~ 490 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLG--RRHGAEGLLKYTESQTIAT 490 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccC--ccchHHHHHHhCCeEEEEE
Confidence 9999999999999999999999999999999999998653 23467899999999999 5789999999999999987
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
++
T Consensus 491 ~~ 492 (524)
T PRK09407 491 QR 492 (524)
T ss_pred cc
Confidence 64
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-94 Score=790.20 Aligned_cols=462 Identities=22% Similarity=0.312 Sum_probs=417.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHh-chhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQA-FPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.+||||+|+.+. +++++++||+||+++++++.++ .|+++|+++|++| |+.|+++|..+|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999764 5689999999999999999999 5999999999995 999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc--------CccccCCCC-CceeeeeeccC-ceEEeecCCCcch
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM--------GEYVPNVSN-GIDTYSLREPL-GVCAGICPFNFPA 190 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~P~-GVv~~I~p~N~P~ 190 (535)
++ +++|+|||+.+++.|+..+++.+++++...+... ++..+.... +...++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 5999999999999999999999999998776522 232231111 23467899998 9999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMH 269 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 269 (535)
+++++++++||++||+||+|||+.+|.++..++++|.++| +|+|++|+|+|+. +..+..++.++.|+||||+.+|+.
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~~~~~~~~~~~V~FTGS~~~G~~ 236 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GDLLDHLDHRDVVAFTGSAATADR 236 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999852 222333467899999999999999
Q ss_pred HHHHH--hcCCCeEEEeCCCcceeeeCCCCC-----HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHH
Q 009407 270 IYARA--SAKGKRVQSNMGAKNHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERA 341 (535)
Q Consensus 270 i~~~a--~~~~~~v~lelgG~~p~iV~~dAd-----l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~ 341 (535)
|++.+ +.+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++
T Consensus 237 i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 316 (663)
T TIGR02278 237 LRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARL 316 (663)
T ss_pred HHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHHH
Confidence 99874 478999999999999999999999 9999999999999999999999999988888 899999999999
Q ss_pred hcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCc-cccccccc
Q 009407 342 KALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADM-ECYKEEIF 420 (535)
Q Consensus 342 ~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~-~i~~eE~F 420 (535)
+++++|+|.|+++++|||+++.+++++.++|++|+++|+++++||... ..|+|++|||+.+++++| .+++||+|
T Consensus 317 ~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-----~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 317 AKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-----LDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-----CCCeeEccEEEeeCCcchhhHHhcccc
Confidence 999999999999999999999999999999999999999999999642 358999999999999886 79999999
Q ss_pred ccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEE-cCC-------CCCCCCCCCccCCCC
Q 009407 421 GPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI--EAGQVGI-NVP-------IPVPLPFFSFTGSKA 490 (535)
Q Consensus 421 gPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l--~~G~V~i-N~~-------~~~~~~~~pfGG~~~ 490 (535)
|||++|++|+|.||||+++|+++|||++||||+|.+.+++++++| ++|+||| |.+ .....+.+||||+|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 642 112236789999999
Q ss_pred CCCCCCCc-chHHHHHhchheeEEEe
Q 009407 491 SFAGDLNF-YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 491 Sg~G~~~~-~g~~gl~~~t~~k~v~~ 515 (535)
||+|+ + +|.+++++|++.|+|..
T Consensus 472 SG~G~--~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 472 AGGGE--ELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CcCCC--ccchHHHHHHhceeEEEEc
Confidence 99995 5 46899999999999864
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-93 Score=773.43 Aligned_cols=465 Identities=27% Similarity=0.359 Sum_probs=429.9
Q ss_pred ceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
.||+|+|+. ++.+++++||+| |+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 35 p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 112 (518)
T cd07125 35 PIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELI 112 (518)
T ss_pred ceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 399999983 468899999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCc-cccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE-YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+++++|+|||+.+++.|+..+++.+++++.......+. ..+ ...+...+++++|+|||++|+|||||+...++++++|
T Consensus 113 ~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~A 191 (518)
T cd07125 113 ALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELP-GPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAA 191 (518)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999998776654433 222 2335567889999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC--
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAK-- 277 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~-- 277 (535)
|++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+. +.+..|+.|++|+.|+||||+.+|+.|++.++++
T Consensus 192 LaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~ 271 (518)
T cd07125 192 LAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG 271 (518)
T ss_pred HHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999999999999999999999965 4889999999999999999999999999988855
Q ss_pred -CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 278 -GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 278 -~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.+++++
T Consensus 272 ~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 351 (518)
T cd07125 272 PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTD 351 (518)
T ss_pred CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999988777 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--CHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD--SLE 433 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~--~~~ 433 (535)
+||++++.+++++.++|++++. ++++++||.... ..|+|+.|||+.++ +|++++||+||||++|++|+ |+|
T Consensus 352 ~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~----~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~d 424 (518)
T cd07125 352 VGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDD----GNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLD 424 (518)
T ss_pred cCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCC----CCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHH
Confidence 9999999999999999999987 468999886421 26899999999888 89999999999999999999 999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhchheeE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~ 512 (535)
|||+++|+++|||++||||+|.+.++++++++++|+|+||++... ..+.+||||+|.||+|+ +++|++|+++||+.|+
T Consensus 425 eAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~-~~gg~~~~~~ft~~k~ 503 (518)
T cd07125 425 EAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP-KAGGPNYLLRFGNEKT 503 (518)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc-ccccHHHHHHhcceEE
Confidence 999999999999999999999999999999999999999987532 34678999999999995 3578999999999999
Q ss_pred EEeccC
Q 009407 513 VTQQWR 518 (535)
Q Consensus 513 v~~~~~ 518 (535)
|+.++.
T Consensus 504 i~~~~~ 509 (518)
T cd07125 504 VSLNTT 509 (518)
T ss_pred EEEEcc
Confidence 988653
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-95 Score=775.91 Aligned_cols=460 Identities=38% Similarity=0.600 Sum_probs=429.1
Q ss_pred eeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh
Q 009407 49 FIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQ 128 (535)
Q Consensus 49 ~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 128 (535)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++.++|++.+++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 777654 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeee
Q 009407 129 GKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFV 208 (535)
Q Consensus 129 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VV 208 (535)
|||..+++.|+..+++.+++++...+.+.++.++. ..+...++.++|+|||++|+|||||+.++++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999888877666653 57788899999999999999999999999999999999999999
Q ss_pred ecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCC
Q 009407 209 LKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGA 287 (535)
Q Consensus 209 lKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG 287 (535)
+|||+.+|.++..+++++.++|+|+|++|+++| +.+.+..|+.|++++.|.||||+++|+.|++.++.+++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 999999999999999999999999999999999 6788999999999999999999999999999999999999999999
Q ss_pred cceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHH
Q 009407 288 KNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKE 366 (535)
Q Consensus 288 ~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~ 366 (535)
|||+||++|||+|.|++.+++++|+|+||.|+++++|||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~ 318 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE 318 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence 999999999999999999999999999999999999988887 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCc
Q 009407 367 RICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGN 446 (535)
Q Consensus 367 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL 446 (535)
++.++|++++.+||++++||.. .......|+|++|||+.++++||++++||+||||++|++|+|++||++++|+++|||
T Consensus 319 ~~~~~i~~a~~~ga~v~~gg~~-~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl 397 (462)
T PF00171_consen 319 RVKALIEDAVAEGAKVLCGGEP-QEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGL 397 (462)
T ss_dssp HHHHHHHHHHHTTSEEEEETSS-SSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEES
T ss_pred hccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCc
Confidence 9999999999999999999831 111236799999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 447 GAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 447 sa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
+++|||+|.+.++++++++++|+|+||+++......+||||+|.||+| +++|.+|+++||+.|+|
T Consensus 398 ~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 398 TASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIG--REGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEES--EBSHHHHHHGTEEEEEE
T ss_pred eeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCC--cchHHHHHHHhCCccCC
Confidence 999999999999999999999999999986544334799999999999 68999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-93 Score=766.58 Aligned_cols=464 Identities=32% Similarity=0.466 Sum_probs=433.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCC-CHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT-PITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
+++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++|++.|+++ +.++|.++|+++++.|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4579999999764 6789999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC----CCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|++++++|+|||..++..|+..+++.++++++....+.++..+.. ..+...+.+++|+|||++|+|||||+.++++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 999999999999999999999999999999987766655433311 1345568899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++| +.+.++.|+.|+++|.|+||||+++|+.|.+.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 456789999999999999999999999999987
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||++++ +|+|+++|.++++++++|+|.+++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 318 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG 318 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6 7999999999999999999999999999999999999999999999988777 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.+++++++.+|+++++||.. ..|+|+.|||+.+++++|++++||+||||++|++|+|++
T Consensus 319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~ 392 (473)
T cd07082 319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR------EGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIE 392 (473)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHH
Confidence 99999999999999999999999999999999864 238999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+.+||||+|.||+| +++|.+|+++||+.|+|
T Consensus 393 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g--~~~g~~~l~~~~~~k~i 470 (473)
T cd07082 393 EAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIG--TQGIGDALRSMTRRKGI 470 (473)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccC--CCChHHHHHHhhceeEE
Confidence 9999999999999999999999999999999999999999976444457899999999999 57999999999999998
Q ss_pred Ee
Q 009407 514 TQ 515 (535)
Q Consensus 514 ~~ 515 (535)
+.
T Consensus 471 ~~ 472 (473)
T cd07082 471 VI 472 (473)
T ss_pred EE
Confidence 65
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-93 Score=763.73 Aligned_cols=447 Identities=29% Similarity=0.424 Sum_probs=415.1
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHH
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVF 140 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 140 (535)
.||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHhcC-ccccCC-CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 141 RGLEVVEHSCGMATLQMG-EYVPNV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
.+++.+++++........ ...+.. ......+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999876654433 222211 123456889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..+++++.++|+|+|++|+++| +.+.++.|++| ++.|+||||+.+|+.|++.++.+++|+++|||||||+||++||
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence 99999999999999999999999 55778889987 5889999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|+++++++++|+|.++++++|||+++.+++++.+++++++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~ 318 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV 318 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 89999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||..... ..|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 319 ~~Ga~vl~gg~~~~~---~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (454)
T cd07101 319 AKGATVLAGGRARPD---LGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGA 395 (454)
T ss_pred HCCCEEEeCCCCCCC---CCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHH
Confidence 999999999864321 25789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCC--CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~--~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+++++++++++|+|+||++.. ...+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 396 ~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~v~ 453 (454)
T cd07101 396 RGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLG--RRHGAEGLLKYTETQTVA 453 (454)
T ss_pred HHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccC--ccchHHHHHHhcceEEEe
Confidence 999999999999999998643 24467999999999999 578999999999999886
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-93 Score=764.78 Aligned_cols=446 Identities=33% Similarity=0.518 Sum_probs=419.3
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCCC----CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNVS----NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+..+++.+++++.......++..+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999998877666554333111 244567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
.+|.++..++++|.++|+|+|++|+++|+ .+.++.|++|++++.|+||||+.+|+.|++.+ +++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~i 238 (453)
T cd07094 161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceE
Confidence 99999999999999999999999999995 45689999999999999999999999999988 5799999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 318 (453)
T cd07094 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999988777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++|+++|+++++||.. .|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 319 i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~ 391 (453)
T cd07094 319 VEEAVEAGARLLCGGER-------DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIF 391 (453)
T ss_pred HHHHHHCCCEEEeCccC-------CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEE
Confidence 99999999999999852 58899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+|.++++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 392 t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~i~ 452 (453)
T cd07094 392 TRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVG--REGVPYAMEEMTEEKTVV 452 (453)
T ss_pred CCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccC--cCChHHHHHHHhceeEEe
Confidence 9999999999999999999999986554578999999999999 579999999999999885
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-93 Score=762.50 Aligned_cols=448 Identities=34% Similarity=0.543 Sum_probs=421.7
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hH
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DV 139 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev 139 (535)
+||+||+++++++.++.++++++++.|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++.. |+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999974 99
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++.+.....+...+ ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~-~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIP-VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceec-CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 99999999998877666554443 22455678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCC
Q 009407 220 IMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDAN 298 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAd 298 (535)
..++++|.++|+|+|++|+|+| +.+.++.|+.|+++|.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 9999999999999999999999 456789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 009407 299 MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIE 377 (535)
Q Consensus 299 l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 377 (535)
+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988777 899999999999999999999999999999999999999999999999
Q ss_pred cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009407 378 SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457 (535)
Q Consensus 378 ~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~ 457 (535)
+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.
T Consensus 321 ~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~ 396 (453)
T cd07115 321 EGARLLTGGKRPG----ARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGR 396 (453)
T ss_pred CCCEEEeCCCCCC----CCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHH
Confidence 9999999986532 358899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 458 a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+++.+
T Consensus 397 ~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~G--~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 397 AHRVAAALKAGTVWINTYNR-FDPGSPFGGYKQSGFG--REMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHHhcCccEEEECCCCC-CCCCCCCCCcccccCC--cCchHHHHHHhhceEEEEEe
Confidence 99999999999999998653 4578999999999999 57999999999999998753
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-93 Score=761.98 Aligned_cols=450 Identities=31% Similarity=0.465 Sum_probs=420.0
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhcc-CCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-h
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWR-NTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-G 137 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ 137 (535)
++||+||+++++++.++.+|+++++++|++|++.|+ ++|..+|.++|+++++.|++++++|+++++.|+|||..++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 4
Q ss_pred hHHHHHHHHHHHHhhHHHhcCcc-ccCC---CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEY-VPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+..+++.+++++.......++. ++.. ..+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999998776654433 2211 1245678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
.+|.++..++++|.++|+|+|++|+++|+ .+.+..|+.|++++.|+||||+.+|+.|++.++.+++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 99999999999999999999999999994 45789999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||+|.|++.+++++|.|+||.|+++++||||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~ 320 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 9999999999999999999999999999999988777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++++++|+++++||..... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~l~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~ 398 (459)
T cd07089 321 IARGRDEGARLVTGGGRPAG--LDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVW 398 (459)
T ss_pred HHHHHHCCCEEEeCCCcCCC--CCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEE
Confidence 99999999999999975321 2368999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+|.+.++++++++++|+|+||++. ...+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 399 t~d~~~~~~~~~~~~~G~v~iN~~~-~~~~~~PfgG~k~SG~G--~~~g~~~l~~ft~~k~v~ 458 (459)
T cd07089 399 SADVDRAYRVARRIRTGSVGINGGG-GYGPDAPFGGYKQSGLG--RENGIEGLEEFLETKSIA 458 (459)
T ss_pred cCCHHHHHHHHHhcCcCeEEECCCC-CCCCCCCcCCcccccCC--CCchHHHHHHhhceeEEe
Confidence 9999999999999999999999876 34577899999999999 579999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-93 Score=763.51 Aligned_cols=447 Identities=31% Similarity=0.507 Sum_probs=418.6
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCC----CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+..+++.+++++.......++..+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999877655444432211 1344567789999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV 293 (535)
.+|.++..++++|.++|+|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|++.++. +|+++|+|||||+||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV 238 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIV 238 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEE
Confidence 999999999999999999999999999977888999999999999999999999999998763 799999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 294 ~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
++|||+|.|++.+++++|.|+||.|+++++||||++ +|+|+++|+++++++++|+|.++++++|||+++.+++++.++|
T Consensus 239 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 318 (452)
T cd07147 239 DSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWV 318 (452)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999988777 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 319 ~~a~~~Ga~~l~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t 391 (452)
T cd07147 319 NEAVDAGAKLLTGGKR-------DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFT 391 (452)
T ss_pred HHHHHCCCEEEecCCc-------CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999863 488999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 392 ~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 392 RDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIG--REGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhcceeEEeC
Confidence 999999999999999999999976544567999999999999 5799999999999999863
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-93 Score=760.27 Aligned_cols=453 Identities=33% Similarity=0.495 Sum_probs=423.1
Q ss_pred CeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 56 EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 56 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4689999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred Hhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCC
Q 009407 134 DAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212 (535)
Q Consensus 134 ~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 212 (535)
++.. |+..+++.+++++.......++..+ ...+...++.++|+|||++|+|||||++.+++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAP-TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceec-CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 9999999999999877666554333 2234456789999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-cCCCeEEEeCCCcce
Q 009407 213 EKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS-AKGKRVQSNMGAKNH 290 (535)
Q Consensus 213 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~-~~~~~v~lelgG~~p 290 (535)
+.+|.++..++++|.++|+|+|++|+|+| +.+.++.|+.|++++.|+||||+.+|+.|++.++ .+++|+++|+||+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 99999999999999999999999999999 5578899999999999999999999999999888 489999999999999
Q ss_pred eeeCCCC-CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHH
Q 009407 291 GIVLPDA-NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERI 368 (535)
Q Consensus 291 ~iV~~dA-dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~ 368 (535)
+||++|| |+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 320 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV 320 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999 99999999999999999999999999988777 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEE
Q 009407 369 CRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGA 448 (535)
Q Consensus 369 ~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa 448 (535)
.++|++++++|+++++||..... ...|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 321 ~~~v~~a~~~Ga~v~~gg~~~~~--~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~ 398 (462)
T cd07112 321 LGYIESGKAEGARLVAGGKRVLT--ETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAA 398 (462)
T ss_pred HHHHHHHHHCCCEEEeCCccCCC--CCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceE
Confidence 99999999999999999865321 1258899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 449 AIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 449 ~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+|||+|.+.+.++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 399 ~i~t~d~~~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~k~SG~G--~~~g~~~~~~f~~~k~i~ 461 (462)
T cd07112 399 SVWTSDLSRAHRVARRLRAGTVWVNCFDE-GDITTPFGGFKQSGNG--RDKSLHALDKYTELKTTW 461 (462)
T ss_pred EEEcCCHHHHHHHHHhcCcceEEECCCCC-CCCCCCCCCcccccCC--ccchHHHHHHHhceeEEE
Confidence 99999999999999999999999998653 4578999999999999 579999999999999875
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-93 Score=760.18 Aligned_cols=450 Identities=30% Similarity=0.465 Sum_probs=421.2
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHH
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVF 140 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 140 (535)
+||+||+++++++.++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHH
Q 009407 141 RGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220 (535)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 220 (535)
.+++.+++++.......+........+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999987766543332221334556788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHH
Q 009407 221 MLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMD 300 (535)
Q Consensus 221 ~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~ 300 (535)
.|.++|.++|+|+|++|+|+|+.+.+..|+.|++|+.|+||||+++|+.|++.++.+.+|+++|+|||||+||++|||+|
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl~ 240 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLD 240 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCHH
Confidence 99999999999999999999966888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC
Q 009407 301 ATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG 379 (535)
Q Consensus 301 ~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G 379 (535)
.|++.+++++|+|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|
T Consensus 241 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~g 320 (452)
T cd07102 241 AAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKG 320 (452)
T ss_pred HHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999988777 89999999999999999999999999999999999999999999999999
Q ss_pred CEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 009407 380 ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459 (535)
Q Consensus 380 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~ 459 (535)
+++++||...... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 321 a~vl~gg~~~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 321 ARALIDGALFPED-KAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CEEEeCCCCCCCC-CCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 9999998753211 136899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 460 ~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++||+.|+++
T Consensus 400 ~~~~~l~~G~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 400 ALGEQLETGTVFMNRCDY-LDPALAWTGVKDSGRG--VTLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHHHcCcceEEECCCCC-CCCCCCCCCccccccC--ccchHHHHHHHhceeEEe
Confidence 999999999999998753 4567899999999999 579999999999999885
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-93 Score=756.93 Aligned_cols=440 Identities=32% Similarity=0.475 Sum_probs=414.4
Q ss_pred CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHH
Q 009407 66 QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEV 145 (535)
Q Consensus 66 g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~ 145 (535)
|+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH-HHHHH
Q 009407 146 VEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS-IMLAE 224 (535)
Q Consensus 146 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~-~~l~~ 224 (535)
+++++.......+...+ ...+...+.+++|+|||++|+|||||+++.++++++||++||+||+|||+.+|.++ ..+++
T Consensus 81 l~~~~~~~~~~~~~~~~-~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILP-SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCcccc-ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 99998776544444333 22455678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHH
Q 009407 225 LAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLN 304 (535)
Q Consensus 225 ~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~ 304 (535)
+|.++|+|+|++|+++|+.+.+..|+.|++++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||+|.|++
T Consensus 160 ~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~ 239 (443)
T cd07152 160 LFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAAS 239 (443)
T ss_pred HHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHH
Confidence 99999999999999999878889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 009407 305 ALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383 (535)
Q Consensus 305 ~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~ 383 (535)
.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++|++++
T Consensus 240 ~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl 319 (443)
T cd07152 240 NGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLE 319 (443)
T ss_pred HHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEE
Confidence 9999999999999999999988777 899999999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009407 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463 (535)
Q Consensus 384 ~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~ 463 (535)
+||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++
T Consensus 320 ~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~ 392 (443)
T cd07152 320 AGGTY-------DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALAD 392 (443)
T ss_pred eccCc-------CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHH
Confidence 99863 47899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 464 EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 464 ~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++++|+|+||+++....+.+||||+|.||+|. +++|++|+++||+.|+++
T Consensus 393 ~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~-~~~g~~~l~~~~~~k~~~ 442 (443)
T cd07152 393 RLRTGMLHINDQTVNDEPHNPFGGMGASGNGS-RFGGPANWEEFTQWQWVT 442 (443)
T ss_pred hCCcCeEEECCCCCCCCCCCCCCCcccccCCC-ccCcHHHHHHhhceeEEe
Confidence 99999999998765445689999999999994 357899999999999875
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-93 Score=763.65 Aligned_cols=466 Identities=19% Similarity=0.267 Sum_probs=414.4
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhc-hhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF-PSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
+++||||+|+.+. +.+++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|..+|.++|+++++.|++++++
T Consensus 5 ~~~~i~G~~~~~~-~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~e 82 (521)
T PRK11903 5 LANYVAGRWQAGS-GAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDA 82 (521)
T ss_pred hhhhCCCEEEcCC-CCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4679999999753 46799999999999999997 8899999999999995 9999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCC--------CCceeeeeecc-CceEEeecCCCcch
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVS--------NGIDTYSLREP-LGVCAGICPFNFPA 190 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~GVv~~I~p~N~P~ 190 (535)
|++++++|+|||+.+++.|+.++++.+++++.+...+.+....... ......+.++| +|||++|+|||||+
T Consensus 83 la~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 162 (521)
T PRK11903 83 YYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPA 162 (521)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHH
Confidence 9999999999999999999999999999999877665432211000 12234567889 69999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~ 268 (535)
+++++++++||++||+||+|||+.+|.++..+++++.++| +|+|++|+|+|+. +.++.| ++++.|+||||+.+|+
T Consensus 163 ~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~ 239 (521)
T PRK11903 163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAA 239 (521)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999854 444433 7899999999999999
Q ss_pred HHHHHH--hcCCCeEEEeCCCcceeeeCCCCC-----HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHH
Q 009407 269 HIYARA--SAKGKRVQSNMGAKNHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVER 340 (535)
Q Consensus 269 ~i~~~a--~~~~~~v~lelgG~~p~iV~~dAd-----l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~ 340 (535)
.|++.+ +.+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++
T Consensus 240 ~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~ 319 (521)
T PRK11903 240 VLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAAR 319 (521)
T ss_pred HHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHH
Confidence 999864 478999999999999999999999 5999999999999999999999999988888 89999999999
Q ss_pred HhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCC--CCCCCceeccEEEecCCC--Cccccc
Q 009407 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP--GYEHGNFIGPTILTDVTA--DMECYK 416 (535)
Q Consensus 341 ~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~--~~~~g~~~~Ptvl~~v~~--d~~i~~ 416 (535)
++++++|+|.|+++++|||+++.+++++.++|+.. .+|+++++||...... ..+.|+|++|||+.++++ ++.+++
T Consensus 320 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~ 398 (521)
T PRK11903 320 LAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHD 398 (521)
T ss_pred HHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHh
Confidence 99999999999999999999999999999999964 5799999999653211 123589999999987654 468899
Q ss_pred ccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEEcCCCC--------CCCCCCCcc
Q 009407 417 EEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI--EAGQVGINVPIP--------VPLPFFSFT 486 (535)
Q Consensus 417 eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l--~~G~V~iN~~~~--------~~~~~~pfG 486 (535)
||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++ ++|+|+||+... ...+.+|||
T Consensus 399 eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfG 478 (521)
T PRK11903 399 VEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHG 478 (521)
T ss_pred CcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999 899999997531 223578999
Q ss_pred CCCCCCCCCCCc-chHHHHHhchheeEEE
Q 009407 487 GSKASFAGDLNF-YGKAGVNFYTQIKTVT 514 (535)
Q Consensus 487 G~~~Sg~G~~~~-~g~~gl~~~t~~k~v~ 514 (535)
|+|.||+|+ + +|.+++++||+.|+|.
T Consensus 479 G~k~SG~Gr--~~g~~~~l~~~t~~~~~~ 505 (521)
T PRK11903 479 GPGRAGGGE--ELGGLRALAFYHRRSAVQ 505 (521)
T ss_pred CCCcCcCCc--ccccHHHHHHHhccceee
Confidence 999999995 4 4589999999988764
|
|
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=757.43 Aligned_cols=452 Identities=35% Similarity=0.523 Sum_probs=421.8
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++||+||+++++++.++.+|+++++++|++|++ .|+.+|.++|.++|+++++.|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChH
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 217 (535)
|+..+++.+++++.......+...+....+...++.++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999987776655544332224556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 218 ASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 218 ~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
++..++++|.++|+|+|++|+++| +.+.+..|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 999999999999999999999999 4568899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 375 (535)
||++.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++|||+++.+++++.++|+++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988777 8999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009407 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455 (535)
Q Consensus 376 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~ 455 (535)
+++|+++++||..........|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 99999999999754321223589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 456 ~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+.++++++++++|+|+||+... ..+.+||||+|.||+| +++|.+|+++||+.|+++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~-~~~~~pfgG~k~SG~G--~~~g~~~~~~f~~~k~~~ 456 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRA-LSPSSPFGGFKDSGIG--RENGIEAIREYTQTKSVW 456 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCC-CCCCCCCCCCccCcCC--ccchHHHHHHHhceeEEe
Confidence 9999999999999999998654 3478999999999999 578999999999999885
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-93 Score=786.97 Aligned_cols=469 Identities=22% Similarity=0.310 Sum_probs=417.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHh-chhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQA-FPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
.++++||||+|+.+ ++.+++++||+||+++++++.++ +|+++|+++|++| ++.|+++++.+|+++|+++++.|++++
T Consensus 3 ~~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~ 80 (675)
T PRK11563 3 QKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERK 80 (675)
T ss_pred ccccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhH
Confidence 45578999999976 45789999999999999999987 6999999999998 799999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc--------CccccCCCCC-ceeeeeeccC-ceEEeecCCC
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM--------GEYVPNVSNG-IDTYSLREPL-GVCAGICPFN 187 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-GVv~~I~p~N 187 (535)
++|++ ++.|+|||..+++.|+..+++.+++++....... ++..+....+ ...+..++|+ |||++|+|||
T Consensus 81 ~ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwN 159 (675)
T PRK11563 81 EELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFN 159 (675)
T ss_pred HHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCc
Confidence 99998 5999999999999999999999999998765432 3222211112 2246788997 9999999999
Q ss_pred cchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHH
Q 009407 188 FPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVA 266 (535)
Q Consensus 188 ~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~ 266 (535)
||++++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+.. ..+..++.+++|+||||+++
T Consensus 160 fP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 160 FPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--DLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred hHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--HHhhcCCCCCEEEEECcHHH
Confidence 9999999999999999999999999999999999999999999 99999999998532 23334467999999999999
Q ss_pred HHHHHHH--HhcCCCeEEEeCCCcceeeeCCCCC-----HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHH
Q 009407 267 GMHIYAR--ASAKGKRVQSNMGAKNHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLV 338 (535)
Q Consensus 267 g~~i~~~--a~~~~~~v~lelgG~~p~iV~~dAd-----l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~ 338 (535)
|+.|++. ++.+++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 317 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALR 317 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHH
Confidence 9999985 4588999999999999999999995 9999999999999999999999999988887 899999999
Q ss_pred HHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccccc---CCCCCCCceeccEEEecCCC--Ccc
Q 009407 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV---VPGYEHGNFIGPTILTDVTA--DME 413 (535)
Q Consensus 339 ~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~~~~g~~~~Ptvl~~v~~--d~~ 413 (535)
++++++++|+|+|+++++|||+++.+++++.++|++|+++ |++++||.... ......|+|++|||+.++++ ++.
T Consensus 318 ~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 318 ARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 9999999999999999999999999999999999999998 99999985321 11123689999999999998 579
Q ss_pred cccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCC--------CCCCCCC
Q 009407 414 CYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPI--------PVPLPFF 483 (535)
Q Consensus 414 i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~--------~~~~~~~ 483 (535)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++++++ +|.||||+.+ ....+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999997 9999999752 1123678
Q ss_pred CccCCCCCCCCCCCc-chHHHHHhchheeEEEe
Q 009407 484 SFTGSKASFAGDLNF-YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 484 pfGG~~~Sg~G~~~~-~g~~gl~~~t~~k~v~~ 515 (535)
||||+|.||+|+ + +|.+|+++|++.|+|..
T Consensus 477 pfGG~k~SG~G~--~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 477 VHGGPGRAGGGE--ELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCCCCCCCc--cccchhHHHHhheeeeeec
Confidence 999999999995 4 56999999999998854
|
|
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=757.13 Aligned_cols=447 Identities=32% Similarity=0.479 Sum_probs=418.8
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHH
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVF 140 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 140 (535)
+||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHhcC-ccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChH
Q 009407 141 RGLEVVEHSCGMATLQMG-EYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217 (535)
Q Consensus 141 ~~~~~l~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 217 (535)
.+++.+++++.......+ +..+.. ..+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 999999999877655433 222211 13556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 218 ~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
++..|+++|.++|+|+|++|+++|+.+.+..|++|+ +|.|+||||+.+|+.|++.++.+++|+++|+|||||+||++||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~-vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da 239 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 999999999999999999999999668888899874 9999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++++.+++++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~ 319 (453)
T cd07099 240 DLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAV 319 (453)
T ss_pred CHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987777 89999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 320 ~~ga~~~~gg~~~~----~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 395 (453)
T cd07099 320 AKGAKALTGGARSN----GGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLA 395 (453)
T ss_pred hCCCEEEeCCCcCC----CCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHH
Confidence 99999999997532 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++++++++++|+||||+.+. ...+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 396 ~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g--~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 396 RAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG--RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC--ccChHHHHHHhcceEEEe
Confidence 999999999999999998753 34578999999999999 589999999999999885
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-92 Score=756.93 Aligned_cols=450 Identities=32% Similarity=0.506 Sum_probs=419.6
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCh-HHhhhh
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL-KDAQGD 138 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~e 138 (535)
++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 688889
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
+..+++.++++++....+.++..+ ...+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLP-FGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceec-cCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 999999999999887776665544 2244556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..+++++.++ +|+|++|+++| +.+.++.|+.|+++|.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 99999999998 45788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-HhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAA-GFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375 (535)
Q Consensus 298 dl~~Aa~~iv~~-~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 375 (535)
|++.|++.++++ +|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG 318 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999 59999999999999988777 8999999999999999999999999999999999999999999999
Q ss_pred HH-cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 376 IE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 376 ~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++ +|+++++||..........|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d 398 (457)
T cd07108 319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398 (457)
T ss_pred HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence 98 99999999975422122468999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHH-HHhchheeEEE
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG-VNFYTQIKTVT 514 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~g-l~~~t~~k~v~ 514 (535)
.++++++++++++|.|+||++.. ..+.+||||+|.||+| +++|.++ +++||+.|+|+
T Consensus 399 ~~~a~~~~~~l~~g~v~iN~~~~-~~~~~pfGG~k~SG~G--~~~g~~~~~~~f~~~k~i~ 456 (457)
T cd07108 399 LGRALRAAHALEAGWVQVNQGGG-QQPGQSYGGFKQSGLG--REASLEGMLEHFTQKKTVN 456 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCC-CCCCCCcCCcccCcCC--CCccchhHHHHhhceEEEe
Confidence 99999999999999999999853 3578999999999999 4688866 79999999875
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-92 Score=759.00 Aligned_cols=456 Identities=25% Similarity=0.364 Sum_probs=419.2
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCC-CeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQ-EVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+.++++||||+|+. ++.+++++||+|+ +++++++.++.+|+++++++|++||+.|+++|..+|.++|+++++.|+++
T Consensus 35 ~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~ 112 (500)
T TIGR01238 35 TWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELH 112 (500)
T ss_pred ceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhH
Confidence 34568899999986 4678999999996 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..++..|+..+++.+++++...+...+ ...++|+|||++|+|||||+.+++++
T Consensus 113 ~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~------------~~~~~P~GVV~~I~pwN~P~~~~~~~ 180 (500)
T TIGR01238 113 MPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLG------------EFSVESRGVFVCISPWNFPLAIFTGQ 180 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------ceeccCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999999999999999999877654321 13589999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+ .+.++.|+.|++|+.|+||||+.+|+.|++.++
T Consensus 181 i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa 260 (500)
T TIGR01238 181 ISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLA 260 (500)
T ss_pred HHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999985 578899999999999999999999999999998
Q ss_pred cCC---CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 276 AKG---KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 276 ~~~---~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
.++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.+
T Consensus 261 ~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~ 340 (500)
T TIGR01238 261 QREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHL 340 (500)
T ss_pred hcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCC
Confidence 876 799999999999999999999999999999999999999999999988777 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC-
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD- 430 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~- 430 (535)
+++++||++++.+++++.++|++++++|++++.++.... .....|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 341 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~-~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 341 LTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDS-RACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCC-CCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 999999999999999999999999999999875432110 0113699999999973 688899999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 431 -SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 431 -~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
++||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.... ..+.+||||+|.||+|. +++|.+++++|+
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~-~~gg~~~~~~~~ 496 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGP-KAGGPHYLYRLT 496 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC-ccCCHHHHHHHH
Confidence 799999999999999999999999999999999999999999987532 23568999999999994 368999999999
Q ss_pred hee
Q 009407 509 QIK 511 (535)
Q Consensus 509 ~~k 511 (535)
+.|
T Consensus 497 ~~k 499 (500)
T TIGR01238 497 QVQ 499 (500)
T ss_pred hhc
Confidence 987
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-92 Score=752.23 Aligned_cols=446 Identities=33% Similarity=0.516 Sum_probs=416.9
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hh
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GD 138 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 138 (535)
++||+||+++++++.++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998764 59
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
+..+++.+++++...+.+.+...+....+...+..++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999877666554332212234456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..+.++|.+ |+|+|++|+++|++ +.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 99999999999854 588999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|+++.
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 319 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP 319 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 89999999999999999999999999999999999999999999998
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 320 -~ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~ 394 (450)
T cd07092 320 -AHARVLTGGRRAE----GPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVG 394 (450)
T ss_pred -cCCEEEeCCCCCC----CCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999997532 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 395 ~~~~~~~~l~~g~v~iN~~~~-~~~~~PfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 395 RAMRLSARLDFGTVWVNTHIP-LAAEMPHGGFKQSGYG--KDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHHhcCccEEEECCCCC-CCCCCCcCCcccCcCC--CCChHHHHHHHheeeEEe
Confidence 999999999999999998764 3478999999999999 579999999999999885
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-92 Score=749.40 Aligned_cols=442 Identities=30% Similarity=0.448 Sum_probs=412.4
Q ss_pred EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhh
Q 009407 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD 138 (535)
Q Consensus 59 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 138 (535)
+++||+||+++++++.++.+|+++++++|+++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 57899999999999999999999999999875 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCC----CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCC
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~ 214 (535)
+..+++.+++++.......++..+.. ..+...+..++|+|||++|+|||||++.+++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999887665544433211 12445678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeee
Q 009407 215 DPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293 (535)
Q Consensus 215 ~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV 293 (535)
+|.++..+.++|.++|+|+|++|+++|+ .+.++.|++|++++.|+||||+.+|+.|++.++ .+++++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 9999999999999999999999999984 577899999999999999999999999998775 6899999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 294 ~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|||+++.+++++.+++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v 316 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV 316 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999988777 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
++++++|+++++||.. .|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 317 ~~a~~~Ga~vl~gg~~-------~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t 389 (451)
T cd07146 317 EEAIAQGARVLLGNQR-------QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCT 389 (451)
T ss_pred HHHHhCCCEEEeCCCc-------CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEC
Confidence 9999999999999852 488999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCC-CCCCcchHHHHHhchheeEEE
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFA-GDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~-G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+|.++++++++++++|+|+||+.+....+.+||||+|.||+ | +++|++|+++||+.|+++
T Consensus 390 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g--~~~g~~~~~~f~~~k~~~ 450 (451)
T cd07146 390 NDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG--KEGVREAMKEMTNVKTYS 450 (451)
T ss_pred CCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc--ccChHHHHHHHhceeEEe
Confidence 99999999999999999999987655556899999999996 5 568999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-92 Score=752.47 Aligned_cols=453 Identities=29% Similarity=0.449 Sum_probs=416.4
Q ss_pred ecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhH
Q 009407 61 INPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDV 139 (535)
Q Consensus 61 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev 139 (535)
+||+||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|.+++++|+++++.|+|||..+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999985 499
Q ss_pred HHHHHHHHHHHhhHHHh-cCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCCh
Q 009407 140 FRGLEVVEHSCGMATLQ-MGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 216 (535)
..+++.+++++...... .+...+.. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999988765542 22222211 1133467889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH----HHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 217 GASIMLAELA----MEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 217 ~~~~~l~~~l----~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
.++..+++++ .++|+|+|++|+|+|+.+.+..|+.|++|+.|.||||+.+|+.|.+.++.+++|+++|+|||||+|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 9998766554 789999999999999778899999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~ 320 (465)
T cd07098 241 VLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEEL 320 (465)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999999988777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++++.+|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+|||++++|+++|||+++||
T Consensus 321 i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~ 400 (465)
T cd07098 321 VADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVF 400 (465)
T ss_pred HHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999865321112368999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+|.+.++++++++++|.|+||.+. ....+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 401 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G--~~~g~~~~~~~~~~k~~~~ 463 (465)
T cd07098 401 GKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFG--RFAGEEGLRGLCNPKSVTE 463 (465)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCC--ccChHHHHHHhheeEEEEE
Confidence 9999999999999999999999864 444578999999999999 5799999999999999875
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-91 Score=747.64 Aligned_cols=448 Identities=37% Similarity=0.567 Sum_probs=422.3
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhH
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDV 139 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 139 (535)
++||+||+++++++.++.+|++++++.|++|++.|++++.++|.++|+++++.|++++++|+++++.|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHH
Q 009407 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219 (535)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 219 (535)
..+++.+++++.......+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999998776666554444222455678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCC
Q 009407 220 IMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDAN 298 (535)
Q Consensus 220 ~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAd 298 (535)
..++++|.++|+|+|++|+++|+ .+.++.|+.|+++|.|+||||+.+|+.|.+.++.+++|+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 99999999999999999999994 56788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 009407 299 MDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIE 377 (535)
Q Consensus 299 l~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 377 (535)
++.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988777 899999999999999999999999999999999999999999999999
Q ss_pred cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHH
Q 009407 378 SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457 (535)
Q Consensus 378 ~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~ 457 (535)
+|+++++||.... ..|+|+.|||+.+++++++++++|+||||++|++|+|++|||+++|+++|||+++|||+|.+.
T Consensus 321 ~ga~~l~gg~~~~----~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~ 396 (451)
T cd07103 321 KGAKVLTGGKRLG----LGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLAR 396 (451)
T ss_pred CCCEEEeCCCcCC----CCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHH
Confidence 9999999987532 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 458 a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++++++++++|.|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 397 ~~~~~~~l~~g~v~vN~~~~-~~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 397 AWRVAEALEAGMVGINTGLI-SDAEAPFGGVKESGLG--REGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHhCCcceEEECCCCC-CCCCCCcCCCccCcCC--ccchHHHHHHHhceeEEe
Confidence 99999999999999999863 3577999999999999 578999999999999875
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-91 Score=741.54 Aligned_cols=426 Identities=33% Similarity=0.514 Sum_probs=400.6
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc-C
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM-G 158 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-~ 158 (535)
+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++...+... +
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999999999999999999999988766553 3
Q ss_pred ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceec
Q 009407 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238 (535)
Q Consensus 159 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~v 238 (535)
+.++ . .+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..|+++|.++|+|+|++|+
T Consensus 81 ~~~~-~-~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIE-T-DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eecc-C-CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 3333 1 2445678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCc
Q 009407 239 VHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRC 318 (535)
Q Consensus 239 v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C 318 (535)
++|+.+.+..|+.|++|+.|.||||+.+|+.|++.++.++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|
T Consensus 159 v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C 238 (429)
T cd07100 159 LLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSC 238 (429)
T ss_pred EeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCC
Confidence 99976778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCC
Q 009407 319 MALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397 (535)
Q Consensus 319 ~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g 397 (535)
++++||||+++ +|+|+++|+++++++++|+|+|+++++||++++.+++++.++|++++.+|+++++||...+ ..|
T Consensus 239 ~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g 314 (429)
T cd07100 239 IAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPD----GPG 314 (429)
T ss_pred CCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCC
Confidence 99999988777 8999999999999999999999999999999999999999999999999999999986532 258
Q ss_pred ceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC
Q 009407 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP 477 (535)
Q Consensus 398 ~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~ 477 (535)
+|++|||+.++++||++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|.|+||++..
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~ 394 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVK 394 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 478 VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 478 ~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
..+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 395 -~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 395 -SDPRLPFGGVKRSGYG--RELGRFGIREFVNIKTVW 428 (429)
T ss_pred -CCCCCCcCCccccccC--CcchHHHHHHhcceeEEe
Confidence 3477999999999999 578999999999999875
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-90 Score=743.24 Aligned_cols=451 Identities=36% Similarity=0.546 Sum_probs=420.9
Q ss_pred eecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-h
Q 009407 60 VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-D 138 (535)
Q Consensus 60 v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-e 138 (535)
++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999988855 9
Q ss_pred HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH
Q 009407 139 VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218 (535)
Q Consensus 139 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 218 (535)
+..+++.+++++.......+...+ ...+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCcccc-CCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 999999999988776555444333 2345667789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 219 ~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+..+.++|.++|+|+|++|+++| +.+.++.|++|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 99999999999999999999998 56788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|++.|++.+++++|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.|+++++||++++.+++++.++|++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR 319 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988777 79999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHH
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~ 456 (535)
.+|+++++||.....+....|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~ 399 (455)
T cd07093 320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399 (455)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997543222235899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 457 ~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++|++.|+++
T Consensus 400 ~~~~~~~~l~~g~v~iN~~~~~-~~~~pfgG~~~SG~G--~~~g~~~~~~~~~~k~~~ 454 (455)
T cd07093 400 RAHRVARRLEAGTVWVNCWLVR-DLRTPFGGVKASGIG--REGGDYSLEFYTELKNVC 454 (455)
T ss_pred HHHHHHHhCCcceEEECCCCCC-CCCCCcCCCccCcCC--CCchHHHHHHHhceeEEe
Confidence 9999999999999999997643 467899999999999 579999999999999885
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=743.19 Aligned_cols=446 Identities=34% Similarity=0.539 Sum_probs=416.3
Q ss_pred EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh
Q 009407 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137 (535)
Q Consensus 58 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 137 (535)
++++||+||+++++++.++.+++++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhHHHhcCccccCC----CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 138 DVFRGLEVVEHSCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 138 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
|+..+++.+++++.......++..+.. ..+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999998876655544333211 1133457889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
.+|.++..+.++|.++|+|+|++|+++|+. +.+..|+.|++++.|+||||+.+|+.|++.++ ++++++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 999999999999999999999999999854 55899999999999999999999999999875 789999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||++.|++.+++++|.|+||.|++++++||+++ +|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 9999999999999999999999999999999988777 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
+++++.+|+++++||.. .|+|+.|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 319 i~~a~~~ga~v~~gg~~-------~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~ 391 (453)
T cd07149 319 VEEAVEGGARLLTGGKR-------DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVF 391 (453)
T ss_pred HHHHHHCCCEEEeCCCC-------CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEE
Confidence 99999999999999863 47899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+|.++++++++++++|+|+||++.....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 392 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 392 TNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTG--REGPRYAIEEMTEIKLVC 452 (453)
T ss_pred cCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccC--CCChHHHHHHhhceeEEe
Confidence 9999999999999999999999986544467999999999999 579999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-90 Score=728.10 Aligned_cols=426 Identities=30% Similarity=0.438 Sum_probs=395.0
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 158 (535)
|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999998877655544
Q ss_pred ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceec
Q 009407 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238 (535)
Q Consensus 159 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~v 238 (535)
.... ...+...+++++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+
T Consensus 81 ~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERAT-PMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred Cccc-CCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 3322 123556788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC-CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 239 VHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK-GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 239 v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~-~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
++|+.+.+..|++|++++.|+||||+.+|+.|++.++.+ .+++++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 160 v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~ 239 (431)
T cd07095 160 VQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQR 239 (431)
T ss_pred EeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 999778889999999999999999999999999987644 6999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCC
Q 009407 318 CMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395 (535)
Q Consensus 318 C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~ 395 (535)
|++++|||||++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++++|+++++||...+ +
T Consensus 240 C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~----~ 315 (431)
T cd07095 240 CTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV----A 315 (431)
T ss_pred CCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC----C
Confidence 999999988886 5999999999999999999999999999999999999999999999999999999986532 3
Q ss_pred CCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCC
Q 009407 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475 (535)
Q Consensus 396 ~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~ 475 (535)
+|+|++|||+ +++++|.+++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++++|+|+||++
T Consensus 316 ~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~ 394 (431)
T cd07095 316 GTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRP 394 (431)
T ss_pred CCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCC
Confidence 6899999999 699999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 476 IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 476 ~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
.....+.+||||+|.||+| +++|.+|+++| +.|++
T Consensus 395 ~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~~-~~~~~ 429 (431)
T cd07095 395 TTGASSTAPFGGVGLSGNH--RPSAYYAADYC-AYPVA 429 (431)
T ss_pred CCCCCCCCCCCCcccccCC--CCChHHHHHHH-hhhhc
Confidence 6555567999999999999 57999999954 44544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-89 Score=727.90 Aligned_cols=442 Identities=22% Similarity=0.272 Sum_probs=396.3
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhc--cCCCHHHH----HHHHHHHHHHHHhc
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSW--RNTPITTR----QRVMLKLQELIRRD 116 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~ 116 (535)
+||||+|+.+ +++++++||+||+++++++.++.+|+++|+++|++||+.| ..++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4899999875 4679999999999999999999999999999999999988 55778899 89999999999998
Q ss_pred --HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccc--cCCCCCceeeeeeccCceEEeecCCCcchhh
Q 009407 117 --IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV--PNVSNGIDTYSLREPLGVCAGICPFNFPAMI 192 (535)
Q Consensus 117 --~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~ 192 (535)
.++|++++++|+|||+.+++.|+..+++.+++++.......++.. +....+...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 499999999999999999999999999999999987766544432 2112345678999999999999999999999
Q ss_pred HhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 193 PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 193 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
.++++++||++||+||+|||+.+|.++.+|+++|.++|+|+|++|+|+|+++.+..|+.|+++++|+||||+.+|+.|..
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~ 238 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLFTGSSKVAERLAL 238 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996555667888999999999999999999988
Q ss_pred HHhcCCCeEEEeCCCcceeeeCCCC-CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-h-hHHHHHHHHHHhcccccCC
Q 009407 273 RASAKGKRVQSNMGAKNHGIVLPDA-NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-S-KSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 273 ~a~~~~~~v~lelgG~~p~iV~~dA-dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~-d~f~~~l~~~~~~l~vG~p 349 (535)
.++ +++++|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++ . |+|+++|+++++++++|+
T Consensus 239 ~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~- 314 (489)
T cd07126 239 ELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED- 314 (489)
T ss_pred HhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC-
Confidence 776 6799999999999999999 99999999999999999999999999998888 4 899999999999999874
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCC-ceeccEEEec------CCCCcccccccccc
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHG-NFIGPTILTD------VTADMECYKEEIFG 421 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g-~~~~Ptvl~~------v~~d~~i~~eE~Fg 421 (535)
+++||++++. .+++.++|+++++ +|+++++||...+....+.+ .|++|||+.. ++++|++++||+||
T Consensus 315 ----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFG 389 (489)
T cd07126 315 ----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFG 389 (489)
T ss_pred ----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcC
Confidence 4899999998 9999999999997 89999999975321000123 3899999842 67899999999999
Q ss_pred cceEEeecCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeE--EEEcCCCCCCCCC---CCccCCCCCCCC
Q 009407 422 PVLLCMQADS--LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ--VGINVPIPVPLPF---FSFTGSKASFAG 494 (535)
Q Consensus 422 Pvl~v~~~~~--~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~--V~iN~~~~~~~~~---~pfGG~~~Sg~G 494 (535)
||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...... +||||+|.||+|
T Consensus 390 PVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g 469 (489)
T cd07126 390 PFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIG 469 (489)
T ss_pred CEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCC
Confidence 9999999999 99999999999999999999999999999999999999 6688776544333 999999999999
Q ss_pred C
Q 009407 495 D 495 (535)
Q Consensus 495 ~ 495 (535)
+
T Consensus 470 ~ 470 (489)
T cd07126 470 T 470 (489)
T ss_pred C
Confidence 5
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=729.37 Aligned_cols=432 Identities=23% Similarity=0.311 Sum_probs=398.4
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMA 153 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 153 (535)
+..+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||..+++ .|+..+++.+++++...
T Consensus 3 ~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~ 82 (484)
T PLN02203 3 APGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNL 82 (484)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999996 69999999999998766
Q ss_pred HHhcCc---cccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC
Q 009407 154 TLQMGE---YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230 (535)
Q Consensus 154 ~~~~~~---~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 230 (535)
+...+. ..+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~- 161 (484)
T PLN02203 83 KKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY- 161 (484)
T ss_pred HHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-
Confidence 554322 1121123446788999999999999999999999999999999999999999999999999999999986
Q ss_pred CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC---CCCHHHHHHHHH
Q 009407 231 LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP---DANMDATLNALA 307 (535)
Q Consensus 231 lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~---dAdl~~Aa~~iv 307 (535)
+|+|++|+++|+.++++.|+.|+ ++.|+||||+++|+.|++.++.+++|+++|+|||||+||++ |||+|.|++.++
T Consensus 162 lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~ 240 (484)
T PLN02203 162 LDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIV 240 (484)
T ss_pred CCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHH
Confidence 99999999999888899999995 99999999999999999999999999999999999999997 699999999999
Q ss_pred HHHhh-ccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 009407 308 AAGFG-AAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385 (535)
Q Consensus 308 ~~~~~-~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 385 (535)
+++|. |+||.|++++|+|||++ +|+|+++|+++++++++|+|.++ +++||++++.+++++.++|++++.+ +++++|
T Consensus 241 ~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~g 318 (484)
T PLN02203 241 GGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHG 318 (484)
T ss_pred HHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeC
Confidence 99996 89999999999988777 89999999999999999999986 6899999999999999999999876 789999
Q ss_pred cccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc
Q 009407 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI 465 (535)
Q Consensus 386 g~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l 465 (535)
|... +.|+|++|||+.++++||++++||+||||++|++|+|++|||+++|+++|||++||||+|.++++++++++
T Consensus 319 g~~~-----~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l 393 (484)
T PLN02203 319 GSID-----EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSET 393 (484)
T ss_pred CCcC-----CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhC
Confidence 8641 36899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 466 EAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 466 ~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|.|+||++.. ...+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 394 ~~G~V~IN~~~~~~~~~~~PfGG~k~SG~G--r~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 394 SSGSVTFNDAIIQYACDSLPFGGVGESGFG--RYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred CcceEEECCcccccCCCCCCCCCcCcccCC--ccccHHHHHHhcceeEEEEcC
Confidence 999999998753 33467999999999999 579999999999999998763
|
|
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-88 Score=772.90 Aligned_cols=464 Identities=27% Similarity=0.390 Sum_probs=426.9
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCC-eeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQE-VVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~-~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+.+||| ++..++++||+|++ ++++++.++.+|+++|+++|++|++.|+.+|.++|+++|+++++.|++++++
T Consensus 553 ~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~e 626 (1038)
T PRK11904 553 AGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAE 626 (1038)
T ss_pred ecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3457777 35679999999987 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCc--cccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE--YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
|+.++++|+|||+.++..|+..++++|+|++.......+. .++ ...+..++..++|+|||++|+|||||+.+.++++
T Consensus 627 L~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i 705 (1038)
T PRK11904 627 LIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLP-GPTGESNELRLHGRGVFVCISPWNFPLAIFLGQV 705 (1038)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccC-CCCCceeEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999887766433 233 3456778899999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +++..|+.||+|+.|+||||+.+|+.|.+.++.
T Consensus 706 ~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~ 785 (1038)
T PRK11904 706 AAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAA 785 (1038)
T ss_pred HHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999954 588999999999999999999999999998876
Q ss_pred C---CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 277 K---GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 277 ~---~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+ .+|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|++++++||+++ +|+|+++|+++++++++|+|.|+
T Consensus 786 ~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~ 865 (1038)
T PRK11904 786 RDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLL 865 (1038)
T ss_pred ccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 5 6899999999999999999999999999999999999999999999988877 89999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD-- 430 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~-- 430 (535)
++++||+|++.+++++.++|+++.+ |+++++||...+ ....|+|+.|||+. .+++.+++||+||||++|++|+
T Consensus 866 ~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~--~~~~G~fv~PTvi~--~~~~~~~~eEiFGPVL~V~~~~~~ 940 (1038)
T PRK11904 866 STDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPA--GTENGHFVAPTAFE--IDSISQLEREVFGPILHVIRYKAS 940 (1038)
T ss_pred cCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCC--CCCCceEEeeEEEc--cCCcHHhCCCCcCcEEEEEEeCCC
Confidence 9999999999999999999999876 899999986532 11359999999995 3577889999999999999998
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCC-CCCCCccCCCCCCCCCCCcchHHHHHhchh
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAGVNFYTQ 509 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~ 509 (535)
+++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+.+... .+..||||+|.||+|. +.+|+++|++|++
T Consensus 941 ~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGG~~~L~~f~~ 1019 (1038)
T PRK11904 941 DLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGP-KAGGPHYLLRFAT 1019 (1038)
T ss_pred CHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCC-ccchHHHHHHHhc
Confidence 6999999999999999999999999999999999999999999875433 3567999999999995 4689999999999
Q ss_pred eeEEEecc
Q 009407 510 IKTVTQQW 517 (535)
Q Consensus 510 ~k~v~~~~ 517 (535)
.|+|++++
T Consensus 1020 ~ktv~~~~ 1027 (1038)
T PRK11904 1020 EKTVTVNT 1027 (1038)
T ss_pred eEEEEEcc
Confidence 99998865
|
|
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-89 Score=721.98 Aligned_cols=428 Identities=25% Similarity=0.330 Sum_probs=395.3
Q ss_pred CCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhh
Q 009407 74 LTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGM 152 (535)
Q Consensus 74 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 152 (535)
.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++..
T Consensus 1 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~ 80 (436)
T cd07135 1 YTPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKN 80 (436)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999999999999999997 4999999999999977
Q ss_pred HHHhc-CccccCC---CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHH
Q 009407 153 ATLQM-GEYVPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAME 228 (535)
Q Consensus 153 ~~~~~-~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~ 228 (535)
..... ++..... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~ 160 (436)
T cd07135 81 LKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK 160 (436)
T ss_pred HHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH
Confidence 65543 2222111 1234567899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHH
Q 009407 229 AGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAA 308 (535)
Q Consensus 229 aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~ 308 (535)
|+|+|++|+++|+++....|+.|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++
T Consensus 161 -~lP~g~v~vv~g~~~~~~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~ 238 (436)
T cd07135 161 -YLDPDAFQVVQGGVPETTALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238 (436)
T ss_pred -hCCcCEEEEEcCCchhHHHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence 699999999999665566799999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccc
Q 009407 309 AGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGR 387 (535)
Q Consensus 309 ~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~ 387 (535)
++|.|+||.|++++|||||++ +|+|+++|+++++++++|+| ++++++||++++.+++++.++++++ |+++++||.
T Consensus 239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 999999999999999987777 89999999999999999999 9999999999999999999999986 889999986
Q ss_pred cccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcce
Q 009407 388 NIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEA 467 (535)
Q Consensus 388 ~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~ 467 (535)
.. +.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++
T Consensus 315 ~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~ 389 (436)
T cd07135 315 MD-----EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRS 389 (436)
T ss_pred cC-----CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCc
Confidence 53 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 468 GQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 468 G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+|+||+... ...+.+||||+|.||+| +++|.+|+++||+.|+|.
T Consensus 390 g~v~iN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 390 GGVVINDTLIHVGVDNAPFGGVGDSGYG--AYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CeEEECCccccccCCCCCcCCcCcccCC--ccccHhHHHHhccccccc
Confidence 9999998753 33578999999999999 579999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=721.85 Aligned_cols=426 Identities=33% Similarity=0.499 Sum_probs=396.7
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 158 (535)
|+++++++|++||+.|++++.++|.++|+++++.|+++.++|++++++|+|||..+++.|+..+++.+++++.......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988888999999999999987765544
Q ss_pred ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceec
Q 009407 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNI 238 (535)
Q Consensus 159 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~v 238 (535)
...+....+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 44442223455688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCC----hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhcc
Q 009407 239 VHGT----HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAA 314 (535)
Q Consensus 239 v~g~----~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~ 314 (535)
++|+ .+++..|++|++|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 9974 246889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCC
Q 009407 315 GQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 315 GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 393 (535)
||.|+++++|||+++ +|+|+++|+++++++++| .+++||++++.+++++.++|++++++|+++++||.....
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~-- 313 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADES-- 313 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC--
Confidence 999999999987777 899999999999999988 678999999999999999999999999999999875421
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEc
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN 473 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN 473 (535)
..|+|+.|||+.+++++|++++||+||||++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 314 -~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN 392 (432)
T cd07105 314 -PSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN 392 (432)
T ss_pred -CCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEEC
Confidence 3589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 474 VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 474 ~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++.....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 393 ~~~~~~~~~~PfgG~~~SG~G--~~~g~~~l~~~~~~k~v~ 431 (432)
T cd07105 393 GMTVHDEPTLPHGGVKSSGYG--RFNGKWGIDEFTETKWIT 431 (432)
T ss_pred CCCCCCCCCCCCCCccccccc--ccChHHHHHHhhceEEEe
Confidence 986444578999999999999 579999999999999885
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-88 Score=722.92 Aligned_cols=427 Identities=35% Similarity=0.549 Sum_probs=401.1
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 158 (535)
|++++++.|++|++.|++++.++|.++|+++++.|++++++|+++++.|+||+..++..|+..+++.+++++.......+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999887766555
Q ss_pred ccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHH-HHHHHHHHHHcCCCcCcee
Q 009407 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA-SIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 159 ~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~-~~~l~~~l~~aGlP~g~v~ 237 (535)
...+....+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 444422245667889999999999999999999999999999999999999999999998 5789999999999999999
Q ss_pred cccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCC
Q 009407 238 IVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQ 316 (535)
Q Consensus 238 vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ 316 (535)
+++|+ .+.+..|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 99985 45789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCC
Q 009407 317 RCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395 (535)
Q Consensus 317 ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~ 395 (535)
.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..
T Consensus 241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~------- 313 (431)
T cd07104 241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY------- 313 (431)
T ss_pred CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------
Confidence 9999999988777 89999999999999999999999999999999999999999999999999999999852
Q ss_pred CCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCC
Q 009407 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475 (535)
Q Consensus 396 ~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~ 475 (535)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~ 393 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQ 393 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 476 IPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 476 ~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+....+.+||||+|.||+| +++|++|+++||+.|+++
T Consensus 394 ~~~~~~~~pfgG~~~SG~g--~~~g~~~l~~~~~~k~~~ 430 (431)
T cd07104 394 TVNDEPHVPFGGVKASGGG--RFGGPASLEEFTEWQWIT 430 (431)
T ss_pred CCCCCCCCCCCCcccccCC--ccchHHHHHHhhceeEEe
Confidence 7544578999999999999 578999999999999875
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-88 Score=726.21 Aligned_cols=429 Identities=22% Similarity=0.347 Sum_probs=395.4
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMA 153 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 153 (535)
.+.+|+++++++|++||++|+.++.++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.++++++..
T Consensus 4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~ 83 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL 83 (493)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999864 9999999999988654
Q ss_pred HH-hcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC
Q 009407 154 TL-QMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230 (535)
Q Consensus 154 ~~-~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 230 (535)
+. ..++.... .......+++++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~- 162 (493)
T PTZ00381 84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY- 162 (493)
T ss_pred HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-
Confidence 43 33332221 112235688999999999999999999999999999999999999999999999999999999996
Q ss_pred CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHH
Q 009407 231 LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAG 310 (535)
Q Consensus 231 lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~ 310 (535)
+|+|++++++|+.+.+..|+.|+ +|.|+||||+.+|+.|+++++++++|+++|||||||+||++|||++.|++.+++++
T Consensus 163 lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~ 241 (493)
T PTZ00381 163 LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGK 241 (493)
T ss_pred CCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999999888889999987 99999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccc
Q 009407 311 FGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389 (535)
Q Consensus 311 ~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 389 (535)
|.|+||.|++++++||+++ +|+|+++|++++++++ |++.++++++||++++.+++++.++++ ++|+++++||...
T Consensus 242 ~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~~ 317 (493)
T PTZ00381 242 FLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEVD 317 (493)
T ss_pred HhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCcC
Confidence 9999999999999988888 8999999999999886 666678899999999999999999996 4689999998642
Q ss_pred cCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeE
Q 009407 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469 (535)
Q Consensus 390 ~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~ 469 (535)
..++|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.
T Consensus 318 -----~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~ 392 (493)
T PTZ00381 318 -----IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGA 392 (493)
T ss_pred -----CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 470 VGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 470 V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
|+||++. +...+.+||||+|.||+| +++|.+|+++||+.|+|..+
T Consensus 393 v~IN~~~~~~~~~~~PFGG~g~SG~G--~~~G~~g~~~fs~~k~v~~~ 438 (493)
T PTZ00381 393 VVINDCVFHLLNPNLPFGGVGNSGMG--AYHGKYGFDTFSHPKPVLNK 438 (493)
T ss_pred EEECCccccccCCCCCCCCcCccccc--ccchHHHHHhccceeEEEEc
Confidence 9999875 444578999999999999 68999999999999999865
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-88 Score=712.84 Aligned_cols=405 Identities=30% Similarity=0.420 Sum_probs=378.3
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecC
Q 009407 106 MLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICP 185 (535)
Q Consensus 106 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p 185 (535)
|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++.+.....+...+....+...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999988776655433322234567889999999999999
Q ss_pred CCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCCh
Q 009407 186 FNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSN 264 (535)
Q Consensus 186 ~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~ 264 (535)
||||+..+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.+..|++|++++.|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999 56778999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc
Q 009407 265 VAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA 343 (535)
Q Consensus 265 ~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~ 343 (535)
.+|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 240 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999988777 89999999999999
Q ss_pred ccccCCCCC-CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCccccccccccc
Q 009407 344 LKVNAGTEA-DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGP 422 (535)
Q Consensus 344 l~vG~p~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgP 422 (535)
+++|+|.++ ++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+|||
T Consensus 241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eE~FgP 316 (409)
T PRK10090 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGP 316 (409)
T ss_pred cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCC----CCCeEEecEEEeCCCCCCHHHhCCCCCc
Confidence 999999998 99999999999999999999999999999999997532 3589999999999999999999999999
Q ss_pred ceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHH
Q 009407 423 VLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502 (535)
Q Consensus 423 vl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~ 502 (535)
|++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||++... .+..||||+|.||+| +++|.+
T Consensus 317 vl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~k~SG~G--~~~g~~ 393 (409)
T PRK10090 317 VLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKH 393 (409)
T ss_pred eEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCC-CCCCCcCCcccccCC--ccchHH
Confidence 99999999999999999999999999999999999999999999999999987643 345799999999999 589999
Q ss_pred HHHhchheeEEEecc
Q 009407 503 GVNFYTQIKTVTQQW 517 (535)
Q Consensus 503 gl~~~t~~k~v~~~~ 517 (535)
|+++||+.|++++++
T Consensus 394 gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 394 GLHEYLQTQVVYLQS 408 (409)
T ss_pred HHHHhcceEEEEEec
Confidence 999999999998754
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-88 Score=714.87 Aligned_cols=422 Identities=25% Similarity=0.339 Sum_probs=388.3
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCc-
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGE- 159 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 159 (535)
+++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++.......+.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999986 49999999999998765443322
Q ss_pred c--ccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 160 Y--VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 160 ~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
. .+........++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 111112235678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHh-hccCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGF-GAAGQ 316 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~-~~~GQ 316 (535)
+++|+.+.++.|+.| .++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++++| .|+||
T Consensus 162 ~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ 240 (432)
T cd07137 162 VIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240 (432)
T ss_pred EEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCC
Confidence 999987888899987 5999999999999999999999999999999999999999999999999999999999 59999
Q ss_pred CccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCC
Q 009407 317 RCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395 (535)
Q Consensus 317 ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~ 395 (535)
.|++++|+||+++ +|+|+++|+++++++++|+| ++++++||++++.+++++.++|++++. |+++++||... .
T Consensus 241 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-----~ 313 (432)
T cd07137 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-----E 313 (432)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-----C
Confidence 9999999988777 89999999999999999999 468999999999999999999999998 89999998642 3
Q ss_pred CCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCC
Q 009407 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475 (535)
Q Consensus 396 ~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~ 475 (535)
.|+|+.|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~ 393 (432)
T cd07137 314 KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDT 393 (432)
T ss_pred CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 476 IP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 476 ~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.. ...+.+||||+|.||+| +++|.+++++||+.|+|+
T Consensus 394 ~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~f~~~k~v~ 431 (432)
T cd07137 394 VVQYAIDTLPFGGVGESGFG--AYHGKFSFDAFSHKKAVL 431 (432)
T ss_pred cccccCCCCCCCCcCcCcCC--ccccHHHHHHhccCceee
Confidence 53 23467999999999999 578999999999999875
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-88 Score=716.21 Aligned_cols=420 Identities=25% Similarity=0.365 Sum_probs=388.0
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCc-
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGE- 159 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 159 (535)
+.+++|++||+.|+++++.+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...+...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5688999999999999999999999999999999999999999999999999997 49999999999999876554332
Q ss_pred cccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 160 YVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 160 ~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
..+.. ..+...++.++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12445678999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
+++|+.+.+..|+.|+ |+.|+||||+++|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~ 239 (449)
T cd07136 161 VVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQT 239 (449)
T ss_pred EEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCc
Confidence 9999778888899776 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCC
Q 009407 318 CMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396 (535)
Q Consensus 318 C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~ 396 (535)
|++++|+||+++ +|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ ++++||... ..
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-----~~ 308 (449)
T cd07136 240 CVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-----RE 308 (449)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-----CC
Confidence 999999987777 8999999999999999999998 88999999999999999999863 899998642 25
Q ss_pred CceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCC
Q 009407 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476 (535)
Q Consensus 397 g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~ 476 (535)
|+|+.|||+.++++||.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+..
T Consensus 309 g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~ 388 (449)
T cd07136 309 TLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTI 388 (449)
T ss_pred CCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred C-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 477 P-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 477 ~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
. ...+.+||||+|.||+| +++|.+|+++||+.|+|+.+
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 389 MHLANPYLPFGGVGNSGMG--SYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred ccccCCCCCccCcCcccCC--cccCHHHHHHhccceEEEEc
Confidence 3 23478999999999999 57899999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-87 Score=705.65 Aligned_cols=424 Identities=25% Similarity=0.346 Sum_probs=386.7
Q ss_pred HHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC-hHHhh-hhHHHHHHHHHHHHhhHHHhcCcc
Q 009407 83 AVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKT-LKDAQ-GDVFRGLEVVEHSCGMATLQMGEY 160 (535)
Q Consensus 83 av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 160 (535)
.+++|++||+.|+++++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.+++++..........
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 599999999999987665433222
Q ss_pred -ccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 161 -VPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 161 -~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
... ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 110 112345688999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
+++|+.+.++.|+.|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 162 ~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 240 (434)
T cd07133 162 VVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQT 240 (434)
T ss_pred EEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCc
Confidence 9999778888898776 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCC
Q 009407 318 CMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396 (535)
Q Consensus 318 C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~ 396 (535)
|++++||||+++ +|+|+++|+++++++++|+ ++++++||++++.+++++.++|++++++|+++++||..... ...
T Consensus 241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~--~~~ 316 (434)
T cd07133 241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGED--FAA 316 (434)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcC--CCC
Confidence 999999987777 8999999999999999886 46789999999999999999999999999999999865321 135
Q ss_pred CceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCC
Q 009407 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476 (535)
Q Consensus 397 g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~ 476 (535)
|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.
T Consensus 317 g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~ 396 (434)
T cd07133 317 TRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTL 396 (434)
T ss_pred CcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 477 -PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 477 -~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
....+.+||||+|.||+| +++|.+|+++||+.|+|+
T Consensus 397 ~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 397 LHVAQDDLPFGGVGASGMG--AYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred cccCCCCCCcCCCCcccCC--CcCCHHHHHHhcccceec
Confidence 334478999999999999 578999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-86 Score=702.37 Aligned_cols=424 Identities=24% Similarity=0.359 Sum_probs=392.3
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHh-cCc
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQ-MGE 159 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~-~~~ 159 (535)
+++++|++||+.|+.++..+|.++|+++++.|++++++|+++++.|+|||+.+++ .|+..+++.+++++...... ...
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999997 69999999999988764432 222
Q ss_pred cccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 160 YVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 160 ~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
..+. ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..+++++.++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 2211 113445789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
+++|+.+.+..|++|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 161 ~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~ 239 (433)
T cd07134 161 VFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQT 239 (433)
T ss_pred EEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCc
Confidence 9999888889999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC-hhHHHHHHHHHHhcccccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCC
Q 009407 318 CMALSTVVFVGD-SKSWEDKLVERAKALKVNAG-TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395 (535)
Q Consensus 318 C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~ 395 (535)
|+++++|||+++ +|+|+++|++++++++.|+| .++++++||++++.+++++.++|++++++|+++++||... .
T Consensus 240 C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-----~ 314 (433)
T cd07134 240 CIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-----A 314 (433)
T ss_pred ccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-----C
Confidence 999999988777 89999999999999988887 8899999999999999999999999999999999998642 3
Q ss_pred CCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCC
Q 009407 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475 (535)
Q Consensus 396 ~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~ 475 (535)
.|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++
T Consensus 315 ~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~ 394 (433)
T cd07134 315 AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDV 394 (433)
T ss_pred CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 476 IP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 476 ~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
+. ...+.+||||+|.||+| +++|++|+++||+.|+|.
T Consensus 395 ~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 395 VLHFLNPNLPFGGVNNSGIG--SYHGVYGFKAFSHERAVL 432 (433)
T ss_pred ccccCCCCCCCCCcCcccCC--CcCcHHHHHHhcccceee
Confidence 53 33478999999999999 578999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-86 Score=757.82 Aligned_cols=451 Identities=24% Similarity=0.377 Sum_probs=413.9
Q ss_pred ceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
-.|+|+. ..+..++++||+| ++++++++.++.+|++.|+++|++|++.|+.+|.++|+++|+++++.|++++++|+
T Consensus 649 p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~ 725 (1318)
T PRK11809 649 PMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLM 725 (1318)
T ss_pred CcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 3567732 2356899999999 78999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
.++++|+|||+.++..|+..++++|+|++....... . ...++|+|||++|+|||||+++.++++++||
T Consensus 726 ~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~----~--------~~~~~PlGVV~~IsPWNFPlai~~g~iaaAL 793 (1318)
T PRK11809 726 GLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDF----D--------NDTHRPLGPVVCISPWNFPLAIFTGQVAAAL 793 (1318)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc----C--------CceeecccEEEEECCCccHHHHHHHHHHHHH
Confidence 999999999999999999999999999997765321 1 2358999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC--
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG-- 278 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~-- 278 (535)
++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|+ .+++..|+.||+|++|+||||+++|+.|.+.++.++
T Consensus 794 aAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~ 873 (1318)
T PRK11809 794 AAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDP 873 (1318)
T ss_pred HcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999994 567999999999999999999999999999988765
Q ss_pred ----CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 279 ----KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 279 ----~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|++.+++||+++ +|+|+++|+++++++++|+|++.+
T Consensus 874 ~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~ 953 (1318)
T PRK11809 874 QGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLS 953 (1318)
T ss_pred ccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 799999999999999999999999999999999999999999999988777 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--C
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD--S 431 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~--~ 431 (535)
+++||+|++.+++++.++|++++++|++++.||..... ....|+|+.|||+.. +++.++++|+||||++|++|+ |
T Consensus 954 tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~-~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ 1030 (1318)
T PRK11809 954 TDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSE-DWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQ 1030 (1318)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCC-CCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCC
Confidence 99999999999999999999999999999987754211 113599999999973 567889999999999999996 7
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCC-CCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
+||+|+++|+++|||+++|||+|.++++++++++++|+||||+..... .+..||||+|.||+|. +.+|++++..|++.
T Consensus 1031 ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~-kaGGp~yL~~f~~~ 1109 (1318)
T PRK11809 1031 LDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP-KAGGPLYLYRLLAT 1109 (1318)
T ss_pred HHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC-CCCCHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999875433 2457999999999995 46899999999998
Q ss_pred eE
Q 009407 511 KT 512 (535)
Q Consensus 511 k~ 512 (535)
+.
T Consensus 1110 ~~ 1111 (1318)
T PRK11809 1110 RP 1111 (1318)
T ss_pred CC
Confidence 74
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-85 Score=755.02 Aligned_cols=454 Identities=25% Similarity=0.361 Sum_probs=417.7
Q ss_pred CceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
+.+|+|+.. .+..++++||+| ++++++++.++.+++++|++.|++|++.|+.+|.++|+++|+++++.|++++++|
T Consensus 556 ~~~i~g~~~---~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL 632 (1208)
T PRK11905 556 APLLAGGDV---DGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPEL 632 (1208)
T ss_pred cceeccccc---cCCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 346666544 245799999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
+.++++|+||++.++..|+..++++++|++...+...+ ...++|+|||++|+|||||+.+.++++++|
T Consensus 633 ~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~i~aA 700 (1208)
T PRK11905 633 FALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQIAAA 700 (1208)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999987654421 135789999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC--
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAK-- 277 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~-- 277 (535)
|++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ +++..|+.||+|+.|+||||+++|+.|.+.++.+
T Consensus 701 LaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~ 780 (1208)
T PRK11905 701 LVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG 780 (1208)
T ss_pred HHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999954 5899999999999999999999999999998876
Q ss_pred -CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 278 -GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 278 -~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
.+|+++|+|||||+||++|||+|.|++.+++|+|.++||.|++++++||+++ +|+|+++|+++++++++|+|.+.+++
T Consensus 781 ~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~ 860 (1208)
T PRK11905 781 PPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTD 860 (1208)
T ss_pred CCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCC
Confidence 4899999999999999999999999999999999999999999999988877 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--CHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD--SLE 433 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~--~~~ 433 (535)
+||+|++.+++++.++|++++++|+.++.|+.... ...|+|+.|||+. + +++.+++||+||||++|++|+ ++|
T Consensus 861 ~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~---~~~G~fv~PTVl~-~-~~~~~~~eEiFGPVL~V~~y~~~dld 935 (1208)
T PRK11905 861 VGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAE---TEKGTFVAPTLIE-I-DSISDLEREVFGPVLHVVRFKADELD 935 (1208)
T ss_pred ccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCC---CCCCeEEeeEEEe-c-CChHHhcCCccCceEEEEEeCCCCHH
Confidence 99999999999999999999999998887653211 1469999999996 3 578899999999999999997 799
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCC-CCCCCccCCCCCCCCCCCcchHHHHHhchheeE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKT 512 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~-~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~ 512 (535)
|+|+++|+++|||+++|||+|.+.++++++++++|+||||+..... .+..||||+|.||+|. +.+|+++|+.|++.|+
T Consensus 936 eaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~-kaGGp~~L~~f~~~k~ 1014 (1208)
T PRK11905 936 RVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP-KAGGPLYLGRLVREAP 1014 (1208)
T ss_pred HHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC-cCCCHHHHHHHhhcce
Confidence 9999999999999999999999999999999999999999875433 3468999999999995 4789999999999999
Q ss_pred EEec
Q 009407 513 VTQQ 516 (535)
Q Consensus 513 v~~~ 516 (535)
++.+
T Consensus 1015 v~~~ 1018 (1208)
T PRK11905 1015 TPIP 1018 (1208)
T ss_pred eecc
Confidence 8754
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=698.47 Aligned_cols=421 Identities=24% Similarity=0.351 Sum_probs=384.9
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCcc
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEY 160 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 160 (535)
+++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...+......
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999996 599999999999987665443222
Q ss_pred ccCC---CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 161 VPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 161 ~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
.... ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 1101 12245688999999999999999999999999999999999999999999999999999999985 9999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
+++|+.+.+..|+. ++||.|+||||+.+|+.|.+.++++++|+++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~ 239 (443)
T cd07132 161 VVLGGVEETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQT 239 (443)
T ss_pred EEeCCHHHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99997766777776 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCC
Q 009407 318 CMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396 (535)
Q Consensus 318 C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~ 396 (535)
|++++||||+++ +|+|+++|++++++++.|+| ++++++||++++.+++++.+++++ +++++||... ..
T Consensus 240 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-----~~ 308 (443)
T cd07132 240 CIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-----EK 308 (443)
T ss_pred eeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-----CC
Confidence 999999988777 89999999999999999988 788999999999999999999873 4899998642 35
Q ss_pred CceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCC
Q 009407 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476 (535)
Q Consensus 397 g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~ 476 (535)
|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|.|+||++.
T Consensus 309 ~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~ 388 (443)
T cd07132 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTI 388 (443)
T ss_pred CCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 477 P-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 477 ~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
. ...+.+||||+|.||+| +++|.+|+++|++.|+|+.++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 389 MHYTLDSLPFGGVGNSGMG--AYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred cccCCCCCCCCCCCcccCC--CcccHHHHHHhccccEEEEcc
Confidence 3 23467999999999999 578999999999999998765
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-84 Score=684.49 Aligned_cols=418 Identities=26% Similarity=0.414 Sum_probs=382.5
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcC-c
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMG-E 159 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~-~ 159 (535)
+++++|++||+.|+.+|+.+|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++.......+ .
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 4999999999999876654432 2
Q ss_pred ccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCcee
Q 009407 160 YVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLN 237 (535)
Q Consensus 160 ~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~ 237 (535)
... ....+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..++++|.+ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 111 011234567889999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred cccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCC
Q 009407 238 IVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR 317 (535)
Q Consensus 238 vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~ 317 (535)
+++|+.+.+..|+.|+ ++.|+||||+.+|+.|++.++.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.
T Consensus 161 vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~ 239 (426)
T cd07087 161 VVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQT 239 (426)
T ss_pred EEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCc
Confidence 9999777889999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCC
Q 009407 318 CMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396 (535)
Q Consensus 318 C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~ 396 (535)
|+++++|||+++ +|+|+++|++++++++.|+| ++.+++||++++.+++++.++++++ ++++||... ..
T Consensus 240 C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-----~~ 308 (426)
T cd07087 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-----KE 308 (426)
T ss_pred cccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-----CC
Confidence 999999988777 89999999999999986666 4688999999999999999999864 889998642 35
Q ss_pred CceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCC
Q 009407 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476 (535)
Q Consensus 397 g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~ 476 (535)
|+|++|||+.++++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++
T Consensus 309 g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~ 388 (426)
T cd07087 309 ERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVL 388 (426)
T ss_pred CCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 477 -PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 477 -~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
....+.+||||+|.||+| +++|.+|+++||+.|+++
T Consensus 389 ~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 389 LHAAIPNLPFGGVGNSGMG--AYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred cccCCCCCCCCCCCcccCC--CccCHHHHHHhccceeec
Confidence 333478999999999999 578999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-81 Score=669.30 Aligned_cols=434 Identities=21% Similarity=0.258 Sum_probs=370.5
Q ss_pred EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-
Q 009407 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG- 137 (535)
Q Consensus 59 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~- 137 (535)
.=+||+|++++++++.++. ++++++|++||+.|+++++.+|.++|+++++.|+++.++|+++++.|+|||..++..
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~ 144 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQA 144 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhc
Confidence 4479999999999999995 899999999999999999999999999999999999999999999999999988853
Q ss_pred ----hHHHHHHHHHHHHhhHHHhcCccc---cCCCCC---ceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCee
Q 009407 138 ----DVFRGLEVVEHSCGMATLQMGEYV---PNVSNG---IDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTF 207 (535)
Q Consensus 138 ----ev~~~~~~l~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~V 207 (535)
++.+.++.+++++.....+.++.. +....+ ...+..++|+|||++|+|||||+++.++++++||++||+|
T Consensus 145 gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~V 224 (551)
T TIGR02288 145 GGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPV 224 (551)
T ss_pred cChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeE
Confidence 778889999998887666554432 211111 1223478999999999999999999999999999999999
Q ss_pred eecCCCCChHHHH----HHHHHHHHcCCCcCceecccC--ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 208 VLKPSEKDPGASI----MLAELAMEAGLPDGVLNIVHG--THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 208 VlKps~~~~~~~~----~l~~~l~~aGlP~g~v~vv~g--~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
|+|||+.+|+++. .+.++|.++|+|+|+||+|+| +.++++.|+.||+|+.|.||||+.+|+.|++.++ .+++
T Consensus 225 VlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v 302 (551)
T TIGR02288 225 LVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQV 302 (551)
T ss_pred EEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcE
Confidence 9999999999765 677999999999999999998 3568899999999999999999999999999876 4899
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC----------hhHHHHHHHHHHhcccccCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD----------SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~----------~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++ +|+|.+
T Consensus 303 ~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~ 381 (551)
T TIGR02288 303 YTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPAR 381 (551)
T ss_pred EeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence 999999999999999999999999999999999999999999998886 699999999999999 999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+.+++|||+++.+++++ ++++++| ++++||.....+..+.++|++|||+...++||++++||+||||++|++|+|
T Consensus 382 ~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d 456 (551)
T TIGR02288 382 ATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDD 456 (551)
T ss_pred ccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECC
Confidence 99999999999999995 5666778 667777543211112336889999953335999999999999999999999
Q ss_pred HHHHHHHHHcC--CCC-cEEEEecCCHHHHHHHHhhc----------ceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCc
Q 009407 432 LEEAIKIVNKN--QYG-NGAAIFTSSGAAARKFQTEI----------EAGQVGINVPIPVPLPFFSFTGSKASFAGDLNF 498 (535)
Q Consensus 432 ~~eai~~~N~~--~~g-Lsa~V~t~d~~~a~~~~~~l----------~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~ 498 (535)
.||||+++|++ +|| |+++|||+|.++++++.+++ ++|.|+||.+ .+|++.+.||.-. .-
T Consensus 457 ~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~-------~~~~~~~~sg~n~-~a 528 (551)
T TIGR02288 457 GAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQS-------AAFSDFHGTGGNP-AA 528 (551)
T ss_pred HHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccC-------CCCCCCCCCCCCC-cc
Confidence 99999999998 566 99999999999999999999 7777777764 3577777776421 22
Q ss_pred chHHHHHhchhee
Q 009407 499 YGKAGVNFYTQIK 511 (535)
Q Consensus 499 ~g~~gl~~~t~~k 511 (535)
+....--.|...+
T Consensus 529 ~~~~~~~~~~~~r 541 (551)
T TIGR02288 529 NASLSDGAFVANR 541 (551)
T ss_pred CCcccchhhhhcc
Confidence 2333334444444
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-82 Score=611.49 Aligned_cols=509 Identities=24% Similarity=0.366 Sum_probs=455.1
Q ss_pred cchhhHhh-ccccccccccccccccccccccccCCCCCC-CceecCee--eeCCCCCeEEeecCCCCCeeEEecCCCHHH
Q 009407 4 RLASIQRV-RNLKAVRPQIFAKFSTDAKLYSKQHNPPRV-PNLIGGAF--IESRSSEYIDVINPATQEVVSQLPLTTNEE 79 (535)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~I~g~~--~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~ 79 (535)
-||++--+ .-|+-+-|++-+-..-++..+. .|.+..- .+||.=.. ....+.+++..+-|+||+.++.++.-++.|
T Consensus 9 ~~a~~~~i~~~~~~l~~p~~~s~~~~~~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~vqCycPatg~yLG~fp~~~~td 87 (583)
T KOG2454|consen 9 VLAFAYAICKFLLMLIPPNVPSIDVDASDVL-AHGKDTEENSFIYIPPRGRSQQSDKKVQCYCPATGKYLGYFPALSPTD 87 (583)
T ss_pred HHHHHHHHHHHHHhhcCCCCCccccCHHHhc-cCCCchhhcCeeecCCCCCCcCCCCceEEecCCCcceeeecccCChhh
Confidence 34444333 2356778888888888888877 6665432 33444222 223345689999999999999999999999
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhh-HHHhc
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGM-ATLQM 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~-~~~~~ 157 (535)
+++.+..|++|+++|.+.++..|.++|+.+.+.|-++.|.+++..++|+||+..+| .+|+--.++-+.|.... .++++
T Consensus 88 ide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~ 167 (583)
T KOG2454|consen 88 IDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLK 167 (583)
T ss_pred HHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcC
Confidence 99999999999999999999999999999999999999999999999999999887 46888888888876644 45566
Q ss_pred CccccCCC--CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHH----HHHcCC
Q 009407 158 GEYVPNVS--NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAEL----AMEAGL 231 (535)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~----l~~aGl 231 (535)
++..|... .-...++.++|+||++.|.|||||+...+.+++.||.+||++|+|-|+.+.++.....++ |+..|-
T Consensus 168 P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~ 247 (583)
T KOG2454|consen 168 PESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGA 247 (583)
T ss_pred CcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCC
Confidence 55444111 113467899999999999999999999999999999999999999999999988765555 466799
Q ss_pred CcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHh
Q 009407 232 PDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGF 311 (535)
Q Consensus 232 P~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~ 311 (535)
|+++++++++-.++++.|.+|+.|+.+.|.||+.+++.|++.+++.++|+++|||||++.||.+|||++..+..++++.|
T Consensus 248 ~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtf 327 (583)
T KOG2454|consen 248 PPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTF 327 (583)
T ss_pred CcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhh
Confidence 99999999997899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccccc
Q 009407 312 GAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390 (535)
Q Consensus 312 ~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 390 (535)
-.+||.|...+|++++.+ +|.|+..|-.+++.++.|.|.....|||.|++..+++.++.+|++|+++||+++.||.+..
T Consensus 328 QSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~ 407 (583)
T KOG2454|consen 328 QSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFG 407 (583)
T ss_pred hhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccC
Confidence 999999999999988888 9999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEE
Q 009407 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQV 470 (535)
Q Consensus 391 ~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V 470 (535)
++.++.|.|++||+|.+++++|.|++||.||||++++++.+.|++++++|+++|||+++||+.|..++.+++++|++|.|
T Consensus 408 Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~v 487 (583)
T KOG2454|consen 408 HPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVV 487 (583)
T ss_pred CCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccce
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 471 GINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 471 ~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
.||+-..+-.-++||||+|.||+| ++.|.+||+...+.|+|..
T Consensus 488 AiNDFasfY~cQlPFGG~k~SGyG--rFaG~EGLrg~Cn~Ksv~y 530 (583)
T KOG2454|consen 488 AINDFASFYMCQLPFGGVKDSGYG--RFAGIEGLRGCCNVKSVAY 530 (583)
T ss_pred eehhhhhhheeccccCCccCCCcc--ccccHHHHHHHhcccceec
Confidence 999976555567999999999999 6899999999999999853
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-80 Score=660.26 Aligned_cols=417 Identities=22% Similarity=0.265 Sum_probs=372.6
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhc--
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM-- 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-- 157 (535)
+++|++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++...+...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999987655322
Q ss_pred CccccCC------CCCceeeeeeccCceEEeecCCCcchhh--HhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHH---
Q 009407 158 GEYVPNV------SNGIDTYSLREPLGVCAGICPFNFPAMI--PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELA--- 226 (535)
Q Consensus 158 ~~~~~~~------~~~~~~~~~~~P~GVv~~I~p~N~P~~~--~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l--- 226 (535)
+...... ..+...+++++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 1111100 1123457889999999999999999988 4589999999999999999999999999998877
Q ss_pred -HHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc--CCCeEEEeCCCcceeeeCCCC---CH
Q 009407 227 -MEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA--KGKRVQSNMGAKNHGIVLPDA---NM 299 (535)
Q Consensus 227 -~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~--~~~~v~lelgG~~p~iV~~dA---dl 299 (535)
.++|+|+|++|+|+| +.+.+..|++|++|+.|+||||+.+|+.|++.+++ +++|+++|+|||||+||++|| |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 489999999999999 45788999999999999999999999999999987 699999999999999999999 89
Q ss_pred HHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHH
Q 009407 300 DATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIE 377 (535)
Q Consensus 300 ~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 377 (535)
|.|++.+++++|.|+||.|++++||||+++ +|+|+++|.++++++++ ||++++.+.++..+.|+++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999887 69999999999998875 477778888888899999999
Q ss_pred c-CCEEEeccccccCCCCCCCceeccEEEecCC---CCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecC
Q 009407 378 S-GARLLLDGRNIVVPGYEHGNFIGPTILTDVT---ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453 (535)
Q Consensus 378 ~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~---~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~ 453 (535)
+ |+++++||... .+|+|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+
T Consensus 311 ~~ga~~l~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~ 385 (454)
T cd07129 311 APGVRVLAGGAAA-----EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGE 385 (454)
T ss_pred cCCcEEEeCCCcC-----CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEcc
Confidence 8 99999999642 368999999997555 68999999999999999999999999999999999999999999
Q ss_pred C--HHHHHHHHhhc--ceeEEEEcCCCCCCC--CCCCccC-CCCCCCCCCCcchHHHHHhchhee
Q 009407 454 S--GAAARKFQTEI--EAGQVGINVPIPVPL--PFFSFTG-SKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 454 d--~~~a~~~~~~l--~~G~V~iN~~~~~~~--~~~pfGG-~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
| .+.+++++++| ++|+|+||+++.... +.+|||| +|.||+|++..+|++++++||++-
T Consensus 386 d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~~ 450 (454)
T cd07129 386 EDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRPV 450 (454)
T ss_pred CchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhcccc
Confidence 9 89999999999 699999998754333 4899999 999999953226899999999973
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-79 Score=654.94 Aligned_cols=429 Identities=39% Similarity=0.579 Sum_probs=400.4
Q ss_pred HHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcc
Q 009407 81 KAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160 (535)
Q Consensus 81 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~ 160 (535)
++++++|++|++.|+.++.++|.++|+++++.|.+++++|+++++.|+||+..++..|+..+++.+++++...+...+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999887766654433
Q ss_pred ccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceeccc
Q 009407 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240 (535)
Q Consensus 161 ~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~ 240 (535)
......+...+.+++|+|||++|+|||||+..+++.+++||++||+||+|||+.+|.++..+.++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 22233466778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChh-HHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCcc
Q 009407 241 GTHD-TVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCM 319 (535)
Q Consensus 241 g~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~ 319 (535)
|+.+ .+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 8554 788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCc
Q 009407 320 ALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398 (535)
Q Consensus 320 a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~ 398 (535)
++++|+|+++ +++|+++|+++++++++|+|+|+++++||++++.+++++.++|+++.++|+++++||..... +.|+
T Consensus 241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~---~~g~ 317 (432)
T cd07078 241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEG---GKGY 317 (432)
T ss_pred CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC---CCCc
Confidence 9999988777 79999999999999999999999999999999999999999999999999999999875421 1589
Q ss_pred eeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC
Q 009407 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV 478 (535)
Q Consensus 399 ~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~ 478 (535)
|++|||+.++++++++++||+||||++|++|+++||||+++|+.++||+++|||+|.+.++++++++++|+|+||+++..
T Consensus 318 ~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~ 397 (432)
T cd07078 318 FVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG 397 (432)
T ss_pred EEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 479 PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 479 ~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
..+.+||||++.||+| +++|++|+++||+.|+|+
T Consensus 398 ~~~~~pfgG~~~sg~g--~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 398 AEPSAPFGGVKQSGIG--REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEE
Confidence 4688999999999999 589999999999999875
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-80 Score=653.13 Aligned_cols=420 Identities=19% Similarity=0.227 Sum_probs=372.8
Q ss_pred HHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHh--cC
Q 009407 81 KAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQ--MG 158 (535)
Q Consensus 81 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~--~~ 158 (535)
+++++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||. ++..|+..+++.+++++...... .+
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 5789999999999999999999999999999999999999999999999999 77789999999999998776543 11
Q ss_pred ccccCCC--CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCC-CcCc
Q 009407 159 EYVPNVS--NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGL-PDGV 235 (535)
Q Consensus 159 ~~~~~~~--~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGl-P~g~ 235 (535)
....... .+...+.+++|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..+.+++.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 1111011 134568899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred eecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC-CHHHHHHHHHHHHhhcc
Q 009407 236 LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA-NMDATLNALAAAGFGAA 314 (535)
Q Consensus 236 v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA-dl~~Aa~~iv~~~~~~~ 314 (535)
+|+++|+.+.+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.|++.+++++|.|+
T Consensus 161 ~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~ 238 (442)
T cd07084 161 VTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACS 238 (442)
T ss_pred eEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhccc
Confidence 99999966688999999999999999999999999998875 8999999999999999999 69999999999999999
Q ss_pred CCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEeccccccC
Q 009407 315 GQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES-GARLLLDGRNIVV 391 (535)
Q Consensus 315 GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~ 391 (535)
||.|++++|+||+++ +++|+++|+++++++++| ++++||++++ ++.++|++++++ |+++++||.....
T Consensus 239 GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~ 309 (442)
T cd07084 239 GQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKN 309 (442)
T ss_pred CCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCccccc
Confidence 999999999988888 599999999999999998 6789999765 456667777777 5999999975321
Q ss_pred C--CCCCCceeccEEEecCCCCc---ccccccccccceEEeecCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhh
Q 009407 392 P--GYEHGNFIGPTILTDVTADM---ECYKEEIFGPVLLCMQADS--LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464 (535)
Q Consensus 392 ~--~~~~g~~~~Ptvl~~v~~d~---~i~~eE~FgPvl~v~~~~~--~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~ 464 (535)
. ....|+|++|||+.+++++| ++++||+||||++|++|+| ++|+++++|+++|||++||||+|.+.+++++++
T Consensus 310 ~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~ 389 (442)
T cd07084 310 HSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGN 389 (442)
T ss_pred CCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHH
Confidence 0 11258999999999999997 9999999999999999999 999999999999999999999999999999999
Q ss_pred c-ceeEEEEcCC-CCCCCCCCCccC-CCCCCCCCCCcchHHHHHhchheeEE
Q 009407 465 I-EAGQVGINVP-IPVPLPFFSFTG-SKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 465 l-~~G~V~iN~~-~~~~~~~~pfGG-~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
+ ++|+||||.. +....+..|||| .|.||+|+. .+|.+++++||+...+
T Consensus 390 l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~-~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 390 LWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAG-IGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHhcCeEEECCCCCCCccccccCCCCCCCCCCCcc-ccchHHhhheeeeeee
Confidence 9 9999999976 344456677866 889999952 2499999999987653
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-79 Score=655.91 Aligned_cols=449 Identities=20% Similarity=0.237 Sum_probs=385.7
Q ss_pred CCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC
Q 009407 52 SRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKT 131 (535)
Q Consensus 52 ~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~ 131 (535)
+.++....++||+|++++++++.+ |++.++++|++|++.|+++++++|.++|++++++|++++++|+++++.|+||+
T Consensus 61 ~~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~ 137 (549)
T cd07127 61 GASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQA 137 (549)
T ss_pred CCCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCC
Confidence 445778999999999999999988 89999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhh-----hHHHHHHHHHHHHhhHHHhcCccccCCC------CCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 132 LKDAQG-----DVFRGLEVVEHSCGMATLQMGEYVPNVS------NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 132 ~~~a~~-----ev~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
..++.. |++++++.++|+++....+.++..+... ........++|+||+++|+|||||+++.+.++++|
T Consensus 138 ~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~A 217 (549)
T cd07127 138 FMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFAS 217 (549)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHH
Confidence 987752 7999999999998876655433221001 11122457899999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHH----HHHHHHHHcCCCcCceecccCC--hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 201 VTCGNTFVLKPSEKDPGASI----MLAELAMEAGLPDGVLNIVHGT--HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~----~l~~~l~~aGlP~g~v~vv~g~--~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
|++||+||+|||+.+|+++. .+.++|.++|+|+|+||+|+++ .++++.|+.||+|+.|.||||+.+|+.|++.+
T Consensus 218 LaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a 297 (549)
T cd07127 218 LATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANA 297 (549)
T ss_pred HhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999998864 4668999999999999999983 46889999999999999999999999999998
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC----------hhHHHHHHHHHHhcc
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD----------SKSWEDKLVERAKAL 344 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~----------~d~f~~~l~~~~~~l 344 (535)
+ .+++++|+|||||+||++|||++.+++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++
T Consensus 298 ~--~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l 375 (549)
T cd07127 298 R--QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL 375 (549)
T ss_pred c--cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh
Confidence 7 4899999999999999999999999999999999999999999999998876 699999999999999
Q ss_pred cccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccce
Q 009407 345 KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424 (535)
Q Consensus 345 ~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl 424 (535)
+|+|.+..+++|||+++.+++++.+ +++.|+ +++||.....+..+.++|++|||+..+++||++++||+||||+
T Consensus 376 -~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl 449 (549)
T cd07127 376 -LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIA 449 (549)
T ss_pred -cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceE
Confidence 9999999999999999999999865 555665 7888865432222234567999999888999999999999999
Q ss_pred EEeecCCHHHHHHHHHcCC--C-CcEEEEecCCHHHHHHHHhh-ccee-EEEEcCCC-CCCCCCCCccCCCCCCCCCCCc
Q 009407 425 LCMQADSLEEAIKIVNKNQ--Y-GNGAAIFTSSGAAARKFQTE-IEAG-QVGINVPI-PVPLPFFSFTGSKASFAGDLNF 498 (535)
Q Consensus 425 ~v~~~~~~~eai~~~N~~~--~-gLsa~V~t~d~~~a~~~~~~-l~~G-~V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~ 498 (535)
+|++|+|.|||++++|++. + ||+++|||+|.+.++++.++ .++| +++||... .+.+..+||||.+.||+-. .-
T Consensus 450 ~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~-~a 528 (549)
T cd07127 450 FVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP-AA 528 (549)
T ss_pred EEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc-cc
Confidence 9999999999999999974 4 69999999999999999998 4555 99999643 2333446799999998643 23
Q ss_pred chHHHHHhchheeE
Q 009407 499 YGKAGVNFYTQIKT 512 (535)
Q Consensus 499 ~g~~gl~~~t~~k~ 512 (535)
+.....-.|...+-
T Consensus 529 ~~~~~~~~fv~~r~ 542 (549)
T cd07127 529 NAALTDGAFVANRF 542 (549)
T ss_pred ccccchhhhhhcce
Confidence 34445555555553
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-80 Score=608.21 Aligned_cols=423 Identities=25% Similarity=0.368 Sum_probs=386.6
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHh-hHHHhc
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCG-MATLQM 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~-~~~~~~ 157 (535)
++..++.+|.+|.+-++.|.+.|.+.|.++...++++.++|.+++..|.+|+..++. .|+...+..++++.. +..|..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 455689999999999999999999999999999999999999999999999999985 589888888888774 456666
Q ss_pred CccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCc
Q 009407 158 GEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGV 235 (535)
Q Consensus 158 ~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~ 235 (535)
++..+.. ..-.+.+++.+|+|||++|+|||||+.+++..+++||+|||+||+|||+.+|.++..+++++-+. ++.++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 6554421 12346788999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred eecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccC
Q 009407 236 LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315 (535)
Q Consensus 236 v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~G 315 (535)
+.||.|+.+.+..|.+| ++|+|+||||+.+|+.|+.+++++++||+||||||+|.+|++|+|++.|+++|+|+++.|+|
T Consensus 163 ~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~G 241 (477)
T KOG2456|consen 163 IRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSG 241 (477)
T ss_pred EEEecCCCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCC
Confidence 99999988777778887 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC
Q 009407 316 QRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394 (535)
Q Consensus 316 Q~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~ 394 (535)
|.|.++++|++..+ .+.++++++..++++. |...+++.+++.+|+..|++|+..+++.- .+++.||..+
T Consensus 242 QtCvapDYiL~~k~~~~kli~alk~~l~eFY-G~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d----- 311 (477)
T KOG2456|consen 242 QTCVAPDYILCSKSIQPKLIDALKSTLKEFY-GENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESD----- 311 (477)
T ss_pred CeeccCCeEEecHhhhHHHHHHHHHHHHHHh-CCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccc-----
Confidence 99999999988777 7999999999999887 55556778999999999999999999852 5899999854
Q ss_pred CCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcC
Q 009407 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV 474 (535)
Q Consensus 395 ~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~ 474 (535)
....|+.|||+.+|++++++|+||+|||||||+.+++++|+|+.+|+.+-.|++|+||+|.....|+.+++.+|.|.+|+
T Consensus 312 ~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND 391 (477)
T KOG2456|consen 312 ESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVND 391 (477)
T ss_pred hhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecc
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 475 PI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 475 ~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
.. +.....+||||++.|||| +|||++|++.||+.|+|-.+
T Consensus 392 ~i~H~~~~~lPFGGVG~SGmG--~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 392 VIMHVTLDSLPFGGVGESGMG--RYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred eEEEEEeeccCcCCcCccccc--cccccccccccccchhhhhc
Confidence 74 555678999999999999 69999999999999998654
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-79 Score=642.68 Aligned_cols=385 Identities=17% Similarity=0.202 Sum_probs=338.9
Q ss_pred HHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHh
Q 009407 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQ 156 (535)
Q Consensus 77 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~ 156 (535)
-+|+++++++|++||+.|++++.++|.++|+++++.|+++.++|++++++|+|||..++. ++.++++++...
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~-- 74 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTP-- 74 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcC--
Confidence 368999999999999999999999999999999999999999999999999999997764 344555543211
Q ss_pred cCcc-c-cC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHH----HH
Q 009407 157 MGEY-V-PN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELA----ME 228 (535)
Q Consensus 157 ~~~~-~-~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~ 228 (535)
+.. + +. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++ .+
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 75 -GTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred -cccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 111 1 10 112234577889999999999999999999999999999999999999999999999999887 48
Q ss_pred cCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHH
Q 009407 229 AGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALA 307 (535)
Q Consensus 229 aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv 307 (535)
+|+|+|++|+++| +.+.++.|++||+|+.|+||||+.+|+.|++. .+|+++|+|||||+||++|||+|.|++.++
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~ 229 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV 229 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence 8999999999998 56788999999999999999999999999875 499999999999999999999999999999
Q ss_pred HHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc--CCEEEe
Q 009407 308 AAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES--GARLLL 384 (535)
Q Consensus 308 ~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~v~~ 384 (535)
+++|+|+||.|++++|||||++ +|+|+++|+++ . .+++++++++++.++|+++.+. |++++.
T Consensus 230 ~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~ 294 (429)
T cd07121 230 QGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV 294 (429)
T ss_pred hcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence 9999999999999999988877 89999999876 1 1478999999999999999864 789999
Q ss_pred ccccccCCCCCCCceec---cEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCc--EEEEecCCHHHHH
Q 009407 385 DGRNIVVPGYEHGNFIG---PTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGN--GAAIFTSSGAAAR 459 (535)
Q Consensus 385 gg~~~~~~~~~~g~~~~---Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL--sa~V~t~d~~~a~ 459 (535)
||....... ..|.|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.++++
T Consensus 295 gg~~~~~~~-~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~ 373 (429)
T cd07121 295 GKDASKILK-AAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLT 373 (429)
T ss_pred CcCHHHHHH-HcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHH
Confidence 885310000 1477777 599999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCC
Q 009407 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFA 493 (535)
Q Consensus 460 ~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~ 493 (535)
++++++++|+||||+++. +.+||||+|.|++
T Consensus 374 ~~a~~l~aG~v~iN~~~~---~~~p~gG~k~s~~ 404 (429)
T cd07121 374 KMARAMQTTIFVKNGPSY---AGLGVGGEGYTTF 404 (429)
T ss_pred HHHhhCCceEEEEcCCCc---CccccCCCccceE
Confidence 999999999999998743 5789999999987
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-78 Score=637.84 Aligned_cols=411 Identities=15% Similarity=0.177 Sum_probs=348.2
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHH--HHHHHHhhHHHhc
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLE--VVEHSCGMATLQM 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~~~~~~~~~ 157 (535)
+++++++|++||+.|+++|+++|.++|+++++.|++++++|+++++.|+|||+.+++.++...+. ..++++.. ..
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 47899999999999999999999999999999999999999999999999999999876654443 22222221 12
Q ss_pred CccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH----HcCCCc
Q 009407 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM----EAGLPD 233 (535)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~ 233 (535)
++..+ ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|.++..++++|. ++|+|+
T Consensus 78 ~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLT-GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred Cceec-CCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 22222 1123446789999999999999999999999999999999999999999999999988888874 789999
Q ss_pred CceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhh
Q 009407 234 GVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFG 312 (535)
Q Consensus 234 g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~ 312 (535)
|++|+|+| +.+.++.|+.||+|++|+||||+. |++.++++++|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 99999998 567889999999999999999997 5667788899999999999999999999999999999999999
Q ss_pred ccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccC
Q 009407 313 AAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391 (535)
Q Consensus 313 ~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 391 (535)
|+||.|++.+|+||+++ +|+|+++|++++ ||+++..+++++.++|+++.++|++++ ||.....
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~~~~~ 296 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQDAYKI 296 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCCHHHH
Confidence 99999999999988777 899999998763 899999999999999999999999875 4432110
Q ss_pred CCCCCCceeccE---EEecCC--CCcccccccccccceEEeecCCHHHHHHHHHcC----CCCcEEEEecCC---HHHHH
Q 009407 392 PGYEHGNFIGPT---ILTDVT--ADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN----QYGNGAAIFTSS---GAAAR 459 (535)
Q Consensus 392 ~~~~~g~~~~Pt---vl~~v~--~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~----~~gLsa~V~t~d---~~~a~ 459 (535)
....|+|+.|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++
T Consensus 297 -~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~ 375 (439)
T cd07081 297 -AAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMN 375 (439)
T ss_pred -HHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHH
Confidence 01248899998 998888 999999999999999999999999999999975 899999999999 99999
Q ss_pred HHHhhcceeEEEEcCCCCCCC--CCCCccCCCCCCCCCCCcchH-----HHHHhchheeEEEe
Q 009407 460 KFQTEIEAGQVGINVPIPVPL--PFFSFTGSKASFAGDLNFYGK-----AGVNFYTQIKTVTQ 515 (535)
Q Consensus 460 ~~~~~l~~G~V~iN~~~~~~~--~~~pfGG~~~Sg~G~~~~~g~-----~gl~~~t~~k~v~~ 515 (535)
++++++++|+|+||.++.+.. ..--|||++.+.+|.+.++|. -+.++|++.|.|..
T Consensus 376 ~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 376 QFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999997652221 123466777555554333332 34788888887753
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-77 Score=637.60 Aligned_cols=407 Identities=16% Similarity=0.175 Sum_probs=350.1
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMAT 154 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~ 154 (535)
...+|+++++++|++||++|+.++.++|.++|+++++.|++++++|+++++.|+||+..+++. ..+++++....
T Consensus 33 ~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~~ 106 (465)
T PRK15398 33 GVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKTP 106 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHhc
Confidence 678899999999999999999999999999999999999999999999999999999988763 22344443321
Q ss_pred ---HhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH----
Q 009407 155 ---LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM---- 227 (535)
Q Consensus 155 ---~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~---- 227 (535)
........ ..+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 107 ~~~~~~~~~~~--~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~ 184 (465)
T PRK15398 107 GVEDLTTEALT--GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIV 184 (465)
T ss_pred cccccccCccc--CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHH
Confidence 11111111 122345778899999999999999999999999999999999999999999999999999875
Q ss_pred HcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHH
Q 009407 228 EAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNAL 306 (535)
Q Consensus 228 ~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~i 306 (535)
++|+|+|++|+++| +.+.++.|++||+||+|+||||+.+|+.|++ ..+|+++|+|||||+||++|||+|.|++.+
T Consensus 185 eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~i 260 (465)
T PRK15398 185 AAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARDI 260 (465)
T ss_pred HcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHHH
Confidence 69999999999998 5678899999999999999999999999988 369999999999999999999999999999
Q ss_pred HHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 009407 307 AAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385 (535)
Q Consensus 307 v~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 385 (535)
++++|.|+||.|++++|||||++ +|+|+++|+++ .+|++++.+++++.++++++..++++++.|
T Consensus 261 ~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~---------------~~~li~~~~~~~v~~~l~~~~~~~~~~~~g 325 (465)
T PRK15398 261 VKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN---------------GAVLLTAEQAEKLQKVVLKNGGTVNKKWVG 325 (465)
T ss_pred HHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc---------------CCccCCHHHHHHHHHHHhhcccccchhhhC
Confidence 99999999999999999988888 89999999876 127999999999999999654456677777
Q ss_pred cccccCCCCCCCcee---ccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCc--EEEEecCCHHHHHH
Q 009407 386 GRNIVVPGYEHGNFI---GPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGN--GAAIFTSSGAAARK 460 (535)
Q Consensus 386 g~~~~~~~~~~g~~~---~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL--sa~V~t~d~~~a~~ 460 (535)
|......+ ..|.++ +|||+.++++||++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++
T Consensus 326 ~~~~~i~~-~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~ 404 (465)
T PRK15398 326 KDAAKILE-AAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNK 404 (465)
T ss_pred CCHHHHHH-hCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHH
Confidence 64210000 135555 4799999999999999999999999999999999999999999998 99999999999999
Q ss_pred HHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 461 ~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++++++|+|+||++.. +++||||+|.|.+ +.+|+.| +..|..|+++.+
T Consensus 405 ~a~~l~~G~V~iN~~~~---~~~p~gg~~~s~~---~~~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 405 MARAIQTSIFVKNGPSY---AGLGLGGEGFTTF---TIATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHhCCceEEEECCCCc---cccCcCCCCCcee---eecccCC-CCccchhhhhhh
Confidence 99999999999998742 5789999999975 2457777 777777766543
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-75 Score=619.00 Aligned_cols=413 Identities=15% Similarity=0.171 Sum_probs=359.0
Q ss_pred CCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhh
Q 009407 74 LTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGM 152 (535)
Q Consensus 74 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~ 152 (535)
..+.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++.++.|+||+..+++. +.......+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 4678899999999999999999999999999999999999999999999999999999888664 222343444444332
Q ss_pred HHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHH----HHHHHH
Q 009407 153 ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML----AELAME 228 (535)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l----~~~l~~ 228 (535)
.+.. +. +. ...+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+ .+++.+
T Consensus 84 ~~~~-G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKTI-GI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Cccc-ce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 2211 22 22 22345577899999999999999999999999999999999999999999999999985 455589
Q ss_pred cCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHH
Q 009407 229 AGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALA 307 (535)
Q Consensus 229 aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv 307 (535)
+|+|+|+||++++ +.+.++.|+.|++|++|+||||+.+++ .++.+++|+++|+|||+|+||++|||+|.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~----~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHH----HHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 9999999999998 678899999999999999999999654 44556899999999999999999999999999999
Q ss_pred HHHhhccCCCccCcceEEEeCC-hhHHHHHHHHH-------HhcccccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 009407 308 AAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVER-------AKALKVNAG-TEADADLGPVISKQAKERICRLIQSGIES 378 (535)
Q Consensus 308 ~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~-------~~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 378 (535)
+++|+|+||.|++.+|+|||++ +|+|+++|+++ .+++++|+| +++++++||+++..+++++.++++.++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999988877 89999999998 889999996 67899999999999999999999999999
Q ss_pred CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHc----CCCCcEEEEecCC
Q 009407 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK----NQYGNGAAIFTSS 454 (535)
Q Consensus 379 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~----~~~gLsa~V~t~d 454 (535)
|+++++||.. .+++++++ .+|.||||++|++|+|+||||+++|+ ++|||+++|||+|
T Consensus 317 gakll~gg~~------------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d 377 (488)
T TIGR02518 317 DAKVLIGEQN------------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSEN 377 (488)
T ss_pred CCEEEEeCCC------------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCC
Confidence 9999998741 25667775 79999999999999999999999988 6999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCC---------CCCC-CCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 455 GAAARKFQTEIEAGQVGINVPI---------PVPL-PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~---------~~~~-~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.+++++|++++++|+|+||++. .+.+ ..+.||++++++++ .+-|++++++.|+|....
T Consensus 378 ~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 378 KDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecc
Confidence 9999999999999999999643 2221 24558888888766 277899999999997655
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-75 Score=610.73 Aligned_cols=408 Identities=17% Similarity=0.220 Sum_probs=347.3
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHH-HHHHHHhhHHHhc
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLE-VVEHSCGMATLQM 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~~~~~~~~~ 157 (535)
+++++++|++||+.|+++|.++|.++|+++++.|++++++|++.+++|+|||+.+++. |+...++ .+++++.. ...
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999986 7777777 77777753 222
Q ss_pred CccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHH----HHcCCCc
Q 009407 158 GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELA----MEAGLPD 233 (535)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~ 233 (535)
+... ...+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++ .++|+|+
T Consensus 79 g~~~--~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIE--EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeec--cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 2211 122445678999999999999999999999999999999999999999999999999988886 4799999
Q ss_pred CceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhh
Q 009407 234 GVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFG 312 (535)
Q Consensus 234 g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~ 312 (535)
|++|+++| +.++++.|++||+|+.|+||||+.+++ .++.+++|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 99999998 567889999999999999999999754 4566789999999999999999999999999999999999
Q ss_pred ccCCCccCcceEEEeCC-hhHHHHHHHHHHhcc-------cccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 009407 313 AAGQRCMALSTVVFVGD-SKSWEDKLVERAKAL-------KVNAG-TEADADLGPVISKQAKERICRLIQSGIESGARLL 383 (535)
Q Consensus 313 ~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l-------~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~ 383 (535)
|+||.|++++||||+++ +|+|+++|+++...+ ++|++ .+.++++||+++..+++++.+++..+..+|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 99999999999988777 899999999998887 89998 4678899999999999998888777777777776
Q ss_pred eccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcC----CCCcEEEEecCCHHHHH
Q 009407 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN----QYGNGAAIFTSSGAAAR 459 (535)
Q Consensus 384 ~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~----~~gLsa~V~t~d~~~a~ 459 (535)
.++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++
T Consensus 313 ~~~------------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~ 373 (436)
T cd07122 313 VAE------------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIE 373 (436)
T ss_pred EEe------------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHH
Confidence 543 35788899987 56799999999999999999999997 89999999999999999
Q ss_pred HHHhhcceeEEEEcCCCCCCCCCCCccCCCC-----CC-CCCCCcchHHHHHhchheeEEE
Q 009407 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKA-----SF-AGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 460 ~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~-----Sg-~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++++++++|+||||+++.++..+..+.|..- +| +|+..-.+..+.++|++.++|.
T Consensus 374 ~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (436)
T cd07122 374 EFALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVA 434 (436)
T ss_pred HHHhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeec
Confidence 9999999999999987653322222222111 11 2221222335678888888764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-74 Score=636.76 Aligned_cols=381 Identities=17% Similarity=0.233 Sum_probs=337.9
Q ss_pred HHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHhC--CChHHh----hhhHHHHHHH
Q 009407 78 EEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNI------TTEQG--KTLKDA----QGDVFRGLEV 145 (535)
Q Consensus 78 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a----~~ev~~~~~~ 145 (535)
.++++++++|++||+.|+++|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888776 3599999999
Q ss_pred HHHHHhhHHHhcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHH
Q 009407 146 VEHSCGMATLQMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223 (535)
Q Consensus 146 l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 223 (535)
+++++...+ ..++..+. ...+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|.++..++
T Consensus 374 ~~~~a~~~~-~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADMED-PIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcCcc-ccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 999998743 33443331 123444678999999999999999 99998 89999999999999999999999999999
Q ss_pred HHHHHcCCCcCc----eecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCH
Q 009407 224 ELAMEAGLPDGV----LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANM 299 (535)
Q Consensus 224 ~~l~~aGlP~g~----v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl 299 (535)
+++.++ +|+|+ +|+|+|+.++++.|+.|++|++|+||||+.. +++.++.+++|+++|||||||+||++|||+
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADl 526 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADM 526 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCH
Confidence 999999 99996 9999986678899999999999999999964 555566678999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 009407 300 DATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378 (535)
Q Consensus 300 ~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 378 (535)
|.|++.+++++|.| ||.|++.+|+|||++ +|+ | .+.++|++|+++
T Consensus 527 d~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~ 572 (718)
T PLN02418 527 DMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRSA 572 (718)
T ss_pred HHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHHC
Confidence 99999999999999 999999999988888 765 2 358899999999
Q ss_pred CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009407 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458 (535)
Q Consensus 379 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a 458 (535)
||++ +||+.. .| ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.+++
T Consensus 573 Ga~l-~Gg~~~------~g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a 637 (718)
T PLN02418 573 GVTL-YGGPRA------SK------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVA 637 (718)
T ss_pred CCEE-ECCccc------cC------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHH
Confidence 9999 677532 13 233 4 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCCCcchHHHHHhchheeEEEe
Q 009407 459 RKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFA--GDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 459 ~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~--G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
.++++++++|.||||+++.+. +..||||+|.||+ |+.+++|++||++||+.|+|+.
T Consensus 638 ~~~a~~l~aG~V~IN~~~~~~-~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~ 695 (718)
T PLN02418 638 EIFLRQVDSAAVFHNASTRFS-DGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILR 695 (718)
T ss_pred HHHHHhCCeeEEEEeCCCCCC-CCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEE
Confidence 999999999999999876443 5689999999999 8655569999999999999975
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-74 Score=609.87 Aligned_cols=388 Identities=20% Similarity=0.210 Sum_probs=336.4
Q ss_pred HHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH----Hhh--------hhHHHHHH
Q 009407 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK----DAQ--------GDVFRGLE 144 (535)
Q Consensus 77 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~ 144 (535)
.+|+++++++|++||+.|+.+|..+|.++|+++++.|++++++|++++++|+||+.. ++. .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 368999999999999999999999999999999999999999999999988877743 443 57888999
Q ss_pred HHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHH
Q 009407 145 VVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222 (535)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l 222 (535)
.+++++.+.+.. ++..+.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.++
T Consensus 83 ~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 83 GLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 999988765432 3333211 22345788999999999999986 4 77889999999999999999999999999999
Q ss_pred HHHH----HHcCCCcCceecccC-Chh-HHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 223 AELA----MEAGLPDGVLNIVHG-THD-TVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 223 ~~~l----~~aGlP~g~v~vv~g-~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
++++ .++|+|+|++|+|+| +.+ .++.|..|++|++|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 8885 699999999999996 544 677788899999999999999999999865 5999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 375 (535)
||+|.|++.+++++|.|+| .|++++|+|||++ +|+|+++|++++++++++
T Consensus 237 Adl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE---------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe----------------------------
Confidence 9999999999999999999 9999999988888 899999999999876532
Q ss_pred HHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009407 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455 (535)
Q Consensus 376 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~ 455 (535)
++ ||.. ..+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 288 ------~~-~~~~------~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~ 349 (417)
T PRK00197 288 ------LR-GDEA------ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDY 349 (417)
T ss_pred ------Ee-cCHH------HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCH
Confidence 22 2211 012 33 9998 46899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCC--CCCcchHHHHHhchheeEEEeccC
Q 009407 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAG--DLNFYGKAGVNFYTQIKTVTQQWR 518 (535)
Q Consensus 456 ~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G--~~~~~g~~gl~~~t~~k~v~~~~~ 518 (535)
++++++++++++|+|+||++.... +..||||.|.||+| +.+++|++|+++||+.|+++....
T Consensus 350 ~~~~~~~~~l~~G~v~VN~~~~~~-~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~~ 413 (417)
T PRK00197 350 AAAERFLNEVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGDG 413 (417)
T ss_pred HHHHHHHHhCCeeEEEEeCCCccC-CCCccccchhheeecCCCcCCCccchHhhcEEEEEEECCC
Confidence 999999999999999999876443 56899999999988 234689999999999999987543
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-75 Score=576.97 Aligned_cols=448 Identities=27% Similarity=0.444 Sum_probs=408.0
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+||+|+++.+++++++..+||+|+.+|++++.++..||++|+.+|+.||+ +|.+++..+|.+.|.+++++++++.++
T Consensus 423 ~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ee 502 (881)
T KOG2452|consen 423 QLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEE 502 (881)
T ss_pred hhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccch
Confidence 569999999999999999999999999999999999999999999999997 599999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCC---CCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|+.+.+++.|.-..-|. ..+...++.+||++++-+.+++..+|.. +......+.++|+|||++|.|||||+.++.|
T Consensus 503 lat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlsw 582 (881)
T KOG2452|consen 503 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSW 582 (881)
T ss_pred hhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHH
Confidence 99999999997655553 3577788999999999999999877732 2233467899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+.+++|++- ++| +++ -.|++|+++|++ -+++.|..||+|+.|-||||+++|+.|++.|
T Consensus 583 k~aaclaa~---~~k-----------~~e-------~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sc 641 (881)
T KOG2452|consen 583 KTAACLAAQ---VLK-----------FAE-------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 641 (881)
T ss_pred HHHHHHHHH---Hhh-----------hhh-------hcceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHH
Confidence 999998752 222 222 148999999965 4789999999999999999999999999998
Q ss_pred hc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 275 SA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 275 ~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+. +.|++.+||||++|+||+.|+|+++|++....+.|++-|..|++..|+++.++ .|+|+.+++++++++++|+|+|.
T Consensus 642 a~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pldr 721 (881)
T KOG2452|consen 642 AISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLDR 721 (881)
T ss_pred hhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCcccc
Confidence 85 57899999999999999999999999999999999999999999999977666 79999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD-- 430 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~-- 430 (535)
+++-||--...++.++.+|++.+++.||++++||+..+ ..|.|++|||++++..+|.+..||.||||+.|.+|+
T Consensus 722 ~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~----r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~ 797 (881)
T KOG2452|consen 722 DTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVP----RPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADG 797 (881)
T ss_pred cccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCC----CCCcccCCeeecccchhhhhhhccccCceEEEEecCCC
Confidence 99999999999999999999999999999999999875 479999999999999999999999999999999997
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
|+|+.++.+|+++|||+++|||+|.+.+.++++.|.+|+|+||...- .+-..||||+|+||+|. ..|.+.|.+|...
T Consensus 798 d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~k-tdvaapfggfkqsgfgk--d~ge~alneyl~~ 874 (881)
T KOG2452|consen 798 DLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNK-TDVAAPFGGFKQSGFGK--DLGEAALNEYLRV 874 (881)
T ss_pred CHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccc-cccccCCCCcccccccc--chhHHHHhhheee
Confidence 58999999999999999999999999999999999999999998742 23567999999999995 5899999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+..|
T Consensus 875 ktit~ey 881 (881)
T KOG2452|consen 875 KTVTFEY 881 (881)
T ss_pred EEEEeeC
Confidence 9998754
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=606.84 Aligned_cols=380 Identities=19% Similarity=0.222 Sum_probs=330.5
Q ss_pred HHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH----Hhh--------hhHHHHHHHHHHH
Q 009407 82 AAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK----DAQ--------GDVFRGLEVVEHS 149 (535)
Q Consensus 82 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~~l~~~ 149 (535)
..+++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+||+.. ++. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777766643 332 4889999999998
Q ss_pred HhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH
Q 009407 150 CGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM 227 (535)
Q Consensus 150 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~ 227 (535)
+...+. .+...+.. ..+...+++++|+|||++|+|| +| .++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 82 a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 865442 23322211 2234567899999999999996 56 7788999999999999999999999999999999886
Q ss_pred ----HcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHH
Q 009407 228 ----EAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDA 301 (535)
Q Consensus 228 ----~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~ 301 (535)
++|+|+|++|+++| +. +.++.|..||+||+|+||||+.+|+.|++.+ ++|+++|||||||+||++|||+|.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 89999999999998 44 4678889999999999999999999999877 699999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Q 009407 302 TLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA 380 (535)
Q Consensus 302 Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 380 (535)
|++.+++++|.|+| .|++++|||||++ +|+|+++|++++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 9999999988878 89999999988764 366
Q ss_pred EEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHH
Q 009407 381 RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460 (535)
Q Consensus 381 ~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~ 460 (535)
+++ +|... ..|++|| +++||++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++
T Consensus 281 ~~~-~g~~~-------~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~ 348 (406)
T cd07079 281 ELR-GDEET-------LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAER 348 (406)
T ss_pred EEe-cCHHH-------HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHH
Confidence 755 43211 1377888 78999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeEEEEcCCCCCCCCCCCccCCCCCCC--CCCCcchHHHHHhchheeEEEe
Q 009407 461 FQTEIEAGQVGINVPIPVPLPFFSFTGSKASFA--GDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 461 ~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~--G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+++++++|+|+||++.... +.+||||.+.||+ |.++++|.+|+++||+.|+|+.
T Consensus 349 ~~~~~~~G~v~iN~~~~~~-~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~ 404 (406)
T cd07079 349 FLREVDSAAVYVNASTRFT-DGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVR 404 (406)
T ss_pred HHHhCCeeEEEEeCCCccc-CCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEe
Confidence 9999999999999876443 4689999999988 2236889999999999999864
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-72 Score=567.21 Aligned_cols=450 Identities=27% Similarity=0.397 Sum_probs=403.0
Q ss_pred eecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 44 LIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 44 ~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
.++|+.+. .++..+++||++ .+++++|..++..|+++|++.|.+|++.|..+|+.+|+.+|++++++++.+..+|..
T Consensus 117 ~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~ 194 (769)
T COG4230 117 IVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMG 194 (769)
T ss_pred ccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666653 357799999999 569999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|.||+...+..||.+++++||||+...+.-.+. ..++|+|+|.+|+|||||+.+...+++.||+
T Consensus 195 L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~ 262 (769)
T COG4230 195 LLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LTHRPLGPVVCISPWNFPLAIFTGQIAAALA 262 (769)
T ss_pred HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cccCCCCcEEEECCCCchHHHHHhHHHHHHH
Confidence 9999999999999999999999999999887752221 2478999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC---C
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAK---G 278 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~---~ 278 (535)
+||+|+-||.++||+.+..-++++.|+|+|++++|+++|++ .++..|+.++++++|.||||+++++.|.+..+++ .
T Consensus 263 aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~ 342 (769)
T COG4230 263 AGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRP 342 (769)
T ss_pred cCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999999999999999966 5899999999999999999999999999888763 5
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
.|++.|.||-|.+||+.+|--|+++..++.|+|..+||+|++.+.+++.++ .|..++.|+-++.++++|+|..-.+|+|
T Consensus 343 ~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVG 422 (769)
T COG4230 343 IPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVG 422 (769)
T ss_pred CceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceecccc
Confidence 789999999999999999999999999999999999999999998876666 7999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC--CHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD--SLEEA 435 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~--~~~ea 435 (535)
|+|+.+..+.++++|+..+..| +.++.-... .+..+|.|+.||++.- +. ..-++.|+||||+.|++|+ ++++.
T Consensus 423 PVIdaEAk~~i~~Hi~~mr~~g-r~v~q~~~~--~~~q~GtFv~Ptl~El-~~-~~eL~rEVFGPVLHVvRy~~~~l~~v 497 (769)
T COG4230 423 PVIDAEAKANIEKHIQTMRSKG-RLVHQAAAP--NSLQKGTFVAPTLIEL-EN-LDELQREVFGPVLHVVRYKRDELDEV 497 (769)
T ss_pred ccccHHHHHHHHHHHHHHHhcc-cchhhccCC--CccCCceeeCceeEEc-CC-HHHHHHHhccceeEEEEecHHHHHHH
Confidence 9999999999999999888777 333322111 1114799999999953 32 2336889999999999996 78999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCC-CCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPL-PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~-~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|+-+|.++|||+.+|||+-.+.+..+.+++++|++|||....... .-.||||.+-||+|. .-+|+.-|..|+..+..
T Consensus 498 i~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGTGP-KAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 498 IDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTGP-KAGGPLYLLRLVSERPW 575 (769)
T ss_pred HHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCCCC-CCCChHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999764332 457999999999996 57899889888876654
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-72 Score=635.76 Aligned_cols=419 Identities=17% Similarity=0.219 Sum_probs=359.9
Q ss_pred EecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHH
Q 009407 71 QLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHS 149 (535)
Q Consensus 71 ~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 149 (535)
++...+.+|+++++++|++||++|+++|.++|.++|+++++.|++++++|++.+++|+|||..+++. +...++..++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 4566899999999999999999999999999999999999999999999999999999999998875 333333444333
Q ss_pred HhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH--
Q 009407 150 CGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM-- 227 (535)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-- 227 (535)
... ....+. +. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~~-~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YKD-EKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hcC-CCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 221 111111 11 1234456789999999999999999999999999999999999999999999999999888874
Q ss_pred --HcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHH
Q 009407 228 --EAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLN 304 (535)
Q Consensus 228 --~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~ 304 (535)
++|+|+|+||+++| +.+.++.|+.|++||+|+||||+.++ +.++.+++|+++|+|||||+||++|||+|.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 68999999999998 67889999999999999999999864 456678999999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEE-
Q 009407 305 ALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARL- 382 (535)
Q Consensus 305 ~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v- 382 (535)
.+++++|+|+||.|++++||||+++ +|+|+++|+++ .+|++++.+++++.++|+++++.|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~---------------g~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH---------------GAYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh---------------CCeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 9999999999999999999988888 89999999876 258999999999999999987666542
Q ss_pred EeccccccCCCCCCCceeccEE------EecCCCCcccccccccccceEEeecCCHHHHHHHHHc----CCCCcEEEEec
Q 009407 383 LLDGRNIVVPGYEHGNFIGPTI------LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK----NQYGNGAAIFT 452 (535)
Q Consensus 383 ~~gg~~~~~~~~~~g~~~~Ptv------l~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~----~~~gLsa~V~t 452 (535)
+.||...... ...|.|++||+ +.+++++|++++ |.||||++|++|+|+||||+++|+ ++|||+++|||
T Consensus 303 ~~g~~~~~~~-~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t 380 (862)
T PRK13805 303 IVGQSAYKIA-EMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYT 380 (862)
T ss_pred ccCCCHHHHH-HHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence 4465321100 02478889987 678999999877 799999999999999999999988 48999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCC---------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIP---------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~---------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|.+++++|++++++|+|+||.++. ...+.+|||| +.||+| +++|+.|+++|++.|+|..+
T Consensus 381 ~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~--~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 381 NDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGN--SVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred CCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCC--cCCCCCCHHHhheeeeeeec
Confidence 9999999999999999999998751 2457899998 999888 67899999999999998754
|
|
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-73 Score=539.88 Aligned_cols=467 Identities=24% Similarity=0.420 Sum_probs=439.6
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
-.++|+|.- ++..+..++|++.++|+.|..++.+|.+.+++.|++|++.|...|...|.++.+++.|.|++..+-|..
T Consensus 22 gvy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~ 99 (507)
T KOG2453|consen 22 GVYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGK 99 (507)
T ss_pred ceeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhh
Confidence 356779974 578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|+||...+..+|++..++.+.|+..+.+.+.+..+|...++.-....|.|+|+|++|+.||||....-|.-+.|+.
T Consensus 100 lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaMv 179 (507)
T KOG2453|consen 100 LVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMV 179 (507)
T ss_pred hhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhh
Confidence 99999999999999999999999999999999999999997778888888999999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHH----HHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 203 CGNTFVLKPSEKDPGASIM----LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||+|++||++.+|+++.. +++.|.+..+|++......|.++.++++..+.+++.+.||||++.++.+.+....+.
T Consensus 180 ~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarf 259 (507)
T KOG2453|consen 180 CGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARF 259 (507)
T ss_pred hcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHh
Confidence 9999999999999988754 555666778999999999999999999999999999999999999999999988888
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
.+..+||||+|+.||.+|||+..++...++++...+||+|+..+|+++|++ +|+.+++|+...+++++|+|+|+.+-+|
T Consensus 260 gk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~g 339 (507)
T KOG2453|consen 260 GKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIG 339 (507)
T ss_pred hhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceec
Confidence 999999999999999999999999999999999999999999999988887 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|+.++++..+.+.-+++++++|.++++||+..+ .+|+|++|||++ ...|.++..+|.|.||+.|.+|.+++||++
T Consensus 340 plht~qav~~f~~~veeak~~ggki~yggkv~e----r~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~a 414 (507)
T KOG2453|consen 340 PLHTQQAVGKFKASVEEAKASGGKIEYGGKVLE----RDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIA 414 (507)
T ss_pred cccCHHHHHHHHHHHHHHHhcCCeEEECCEeec----cCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhhe
Confidence 999999999999999999999999999999876 579999999997 899999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHh--hcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQT--EIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~--~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+-|+.+.||++||||+|+.++.+... .-++|.|+||-++..+..+-.|||.|..|-| |+.|.+++++|+++.++++
T Consensus 415 innev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tggg--resgsdswkqymrrstcti 492 (507)
T KOG2453|consen 415 INNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG--RESGSDSWKQYMRRSTCTI 492 (507)
T ss_pred eccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCC--cccCchHHHHHHhhceeee
Confidence 99999999999999999999999885 5589999999998766667789999999867 6789999999999999999
Q ss_pred ccC
Q 009407 516 QWR 518 (535)
Q Consensus 516 ~~~ 518 (535)
+|.
T Consensus 493 nys 495 (507)
T KOG2453|consen 493 NYS 495 (507)
T ss_pred ecc
Confidence 985
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-72 Score=549.66 Aligned_cols=476 Identities=24% Similarity=0.331 Sum_probs=420.3
Q ss_pred ccCCCCCCCceecCeeeeCCCCCeEEeecCCCC-CeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHH
Q 009407 34 KQHNPPRVPNLIGGAFIESRSSEYIDVINPATQ-EVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQEL 112 (535)
Q Consensus 34 ~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg-~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 112 (535)
..+++.++|+.|||+.+... ......+|++. .+++++..++.+++++|+++|.+|++.|..+|+.+|.+++++.|++
T Consensus 53 ~~~~~~evP~vIg~~~v~t~--~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdl 130 (561)
T KOG2455|consen 53 LQKRPLEVPLVIGDKEVYTN--DEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADL 130 (561)
T ss_pred HhcCceeccEEECCeeeecC--CcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHH
Confidence 34568899999999999764 44788899995 5899999999999999999999999999999999999999999999
Q ss_pred HH-hcHHHHHHHHHHHhCCChHHhhhh-HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccC-ceEEeecCCCcc
Q 009407 113 IR-RDIDKLAMNITTEQGKTLKDAQGD-VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL-GVCAGICPFNFP 189 (535)
Q Consensus 113 l~-~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-GVv~~I~p~N~P 189 (535)
+. +++-+|....+..+||+..+|+.+ ..+.++++|+.+..+..+..........+..+...++|+ |.|++|+||||-
T Consensus 131 istkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnft 210 (561)
T KOG2455|consen 131 ISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFT 210 (561)
T ss_pred hcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEeccccee
Confidence 99 678889899999999999999765 778889999988777766554333234566666777777 999999999998
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~ 268 (535)
....-...+||| +||+|++|||..+.++++++.++|+|||+|+|++|+|+++ ...++.+..+|.+.++.||||+.+-+
T Consensus 211 AI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk 289 (561)
T KOG2455|consen 211 AIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFK 289 (561)
T ss_pred eeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHH
Confidence 766666666665 6999999999999999999999999999999999999995 56789999999999999999999999
Q ss_pred HHHHHHhcC------CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHH
Q 009407 269 HIYARASAK------GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERA 341 (535)
Q Consensus 269 ~i~~~a~~~------~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~ 341 (535)
.+.+..+++ .-+++.|+||||..+|+++||++.++...++++|.++||.|.+.+|+++.++ .+.+.++|.+.-
T Consensus 290 ~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~ 369 (561)
T KOG2455|consen 290 HLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEH 369 (561)
T ss_pred HHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHH
Confidence 999988875 4578999999999999999999999999999999999999999999987777 688999999999
Q ss_pred hcccccCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHHc-CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccc
Q 009407 342 KALKVNAG-TEADADLGPVISKQAKERICRLIQSGIES-GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEI 419 (535)
Q Consensus 342 ~~l~vG~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~ 419 (535)
+++++|+| .|..+++||+|+.+.++|++++|+.|+.. -.++++||+.++ +.|+|+.|||+.--+|+++++.||+
T Consensus 370 ~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~Dd----S~G~FV~PTiv~~kdP~~pim~ee~ 445 (561)
T KOG2455|consen 370 SQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDD----STGYFVEPTIVLSKDPKDPIMTEEI 445 (561)
T ss_pred hhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccC----CCCeeecceEEEccCCCcchhhhhc
Confidence 99999998 78899999999999999999999999764 478999999876 6899999999999999999999999
Q ss_pred cccceEEeecCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCCCCC-CCCCCccCCCCCCC
Q 009407 420 FGPVLLCMQADS--LEEAIKIV-NKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPIPVP-LPFFSFTGSKASFA 493 (535)
Q Consensus 420 FgPvl~v~~~~~--~~eai~~~-N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~~~~-~~~~pfGG~~~Sg~ 493 (535)
|||||+|+.|+| ++|+++++ |.++|||+.+||++|.+.+.+..++|+ +|+.|||+-...+ ....||||.+.||+
T Consensus 446 fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGT 525 (561)
T KOG2455|consen 446 FGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGT 525 (561)
T ss_pred cCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCC
Confidence 999999999975 89999999 558999999999999999999999886 8999999965433 46789999999998
Q ss_pred CCCCcchHHHHHhchheeEEEecc
Q 009407 494 GDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 494 G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.. .-+|+.=+..|+.+++|...+
T Consensus 526 ND-KaGgp~~l~RwtSp~~ikEt~ 548 (561)
T KOG2455|consen 526 ND-KAGGPHYLLRWTSPLSIKETF 548 (561)
T ss_pred CC-CCCCceEEEeecCcchhhhcc
Confidence 64 346666677788888776544
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-69 Score=568.39 Aligned_cols=372 Identities=14% Similarity=0.130 Sum_probs=330.3
Q ss_pred HHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-----------hhHHHHHHHHHHHHhhH
Q 009407 85 SAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-----------GDVFRGLEVVEHSCGMA 153 (535)
Q Consensus 85 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~~~~~ 153 (535)
++|++||+.|+++|.++|.++|+++++.|++++++|+++++.|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999999999999965432 37888888888887654
Q ss_pred HHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHc---C
Q 009407 154 TLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEA---G 230 (535)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a---G 230 (535)
....+...+ .+...+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|.++..+++++.++ |
T Consensus 81 ~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLP---DNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEec---CCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 433333322 13356889999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHH
Q 009407 231 LPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAA 309 (535)
Q Consensus 231 lP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~ 309 (535)
+|+++++++++ +.+.+..|+.|+++|.|+||||+.+++.+.+.+. .+|+++|+||++|+||++|||+|.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 99999999997 6678899999999999999999999999988774 68999999999999999999999999999999
Q ss_pred HhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccc
Q 009407 310 GFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRN 388 (535)
Q Consensus 310 ~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 388 (535)
+|.| ||.|+++++|||+++ +|+|+++|+++++. +|++++.||+
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~- 278 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK- 278 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence 9999 999999999988887 89999999988763 4777776652
Q ss_pred ccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH----HHHHHHHcCCCCcEEEEecCCHHHHHHHHhh
Q 009407 389 IVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE----EAIKIVNKNQYGNGAAIFTSSGAAARKFQTE 464 (535)
Q Consensus 389 ~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~----eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~ 464 (535)
+.|+.|| ++|++++||+||||++|++|+|+| +|++++|+++|||+++|||+|.+++++++++
T Consensus 279 --------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~ 344 (397)
T cd07077 279 --------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQY 344 (397)
T ss_pred --------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHh
Confidence 4577776 688999999999999999999996 6667889999999999999999999999999
Q ss_pred cceeEEEEcCCCCCC-CCCCCccCCC--CCCCCCCCcch-HHHHHhchheeEEE
Q 009407 465 IEAGQVGINVPIPVP-LPFFSFTGSK--ASFAGDLNFYG-KAGVNFYTQIKTVT 514 (535)
Q Consensus 465 l~~G~V~iN~~~~~~-~~~~pfGG~~--~Sg~G~~~~~g-~~gl~~~t~~k~v~ 514 (535)
+++|.|+||++.... ...+||||++ .||+| +++| .+|+++|++.|+|.
T Consensus 345 l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g--~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 345 IDTASFYPNESSKKGRGAFAGKGVERIVTSGMN--NIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred CCEEEEEEeCCccCCCccccCCCcceEEEcccc--CCCCCCCChHHhcceeEee
Confidence 999999999876433 3568999999 89998 5789 99999999999875
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=594.41 Aligned_cols=379 Identities=16% Similarity=0.186 Sum_probs=323.6
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh----------------hHHHH
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG----------------DVFRG 142 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~----------------ev~~~ 142 (535)
+++..+++|++||++|+.+|.++|.++|+++++.|++++++|+ .++||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 3788899999999999999999999999999999999999996 578888877654 36778
Q ss_pred HHHHHHHHhhHHHhcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHH
Q 009407 143 LEVVEHSCGMATLQMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220 (535)
Q Consensus 143 ~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 220 (535)
+..++++++..+ ..++..+. ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~~~~-~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAAMED-PIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhcCCC-cccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 888888876422 22332221 112344567899999999999999 9998 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCcC----ceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 221 MLAELAMEAGLPDG----VLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 221 ~l~~~l~~aGlP~g----~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
.+++++.++ +|+| ++++|++..+.++.|..|++||+|+||||+.+|+.|++.++ +|+++|||||||+||++|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 999999999 9987 68999865567788999999999999999999999998874 999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSG 375 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a 375 (535)
||++.|++.++.++|.+ ||.|++++|||||++ +|+ | .+.++++.+
T Consensus 516 ADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~~ 561 (715)
T TIGR01092 516 ASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDML 561 (715)
T ss_pred CCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHHH
Confidence 99999987777776655 999999999988777 653 0 256778888
Q ss_pred HHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCH
Q 009407 376 IESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455 (535)
Q Consensus 376 ~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~ 455 (535)
.++|++++ ||... . .|+. ..+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 562 ~~~Ga~l~-Gg~~~------~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~ 628 (715)
T TIGR01092 562 RTEGVTIH-GGPRF------A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDE 628 (715)
T ss_pred HHCCCEEE-CCcch------h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCH
Confidence 88999984 77532 1 2332 2367899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCC--CcchHHHHHhchheeEEEec
Q 009407 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDL--NFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 456 ~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~--~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++++|++++++|.|+||+++.+ .+.+||||+|.||+|++ +++|++|+++||+.|+|+..
T Consensus 629 ~~a~~~~~~i~sG~V~vN~~~~~-~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 629 NVAEFFLQHVDSAAVFHNASTRF-SDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCC-CCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 99999999999999999987543 35789999999999953 36899999999999999763
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-69 Score=561.97 Aligned_cols=375 Identities=19% Similarity=0.206 Sum_probs=319.6
Q ss_pred HHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHhCCCh------HHhhhhHHHHHHHHHHHHhhHH
Q 009407 87 AKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMN------ITTEQGKTL------KDAQGDVFRGLEVVEHSCGMAT 154 (535)
Q Consensus 87 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~~~~~~ 154 (535)
|++||+.|+++|..+|.++|+++++.|++++++|+++ +++|+|||. .+++.|+..+++.++++++..+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3466799999999999997775
Q ss_pred HhcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHH----HHH
Q 009407 155 LQMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAEL----AME 228 (535)
Q Consensus 155 ~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~----l~~ 228 (535)
.. ++.++. ...+...+++++|+|||++|+||| | +.+++++++||++||+||+|||+.+|.++..++++ |.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 43 444432 123556788999999999999997 6 77889999999999999999999999999999999 569
Q ss_pred cCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHH
Q 009407 229 AGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNAL 306 (535)
Q Consensus 229 aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~i 306 (535)
+|+|+|++|+|+| +. +.++.|..||+|++|+||||+.+|+.+++. ..+|+++|+|||||+||++|||+|.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 9999999999997 54 467889999999999999999999988775 358999999999999999999999999999
Q ss_pred HHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 009407 307 AAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385 (535)
Q Consensus 307 v~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 385 (535)
++++|.+ ||.|++++|+|||++ +|+|+++|+++++++++. +++ .+.+.+++..
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~--------~~~------~~~i~~~v~~----------- 288 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT--------IHA------DAYALKLLEL----------- 288 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE--------Eec------CHHHHHHHhc-----------
Confidence 9999965 999999999988888 899999999999876431 221 1334433321
Q ss_pred cccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc
Q 009407 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI 465 (535)
Q Consensus 386 g~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l 465 (535)
|. ||++ ++ +|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++
T Consensus 289 g~--------------~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i 351 (398)
T TIGR00407 289 GP--------------ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGV 351 (398)
T ss_pred cC--------------cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhC
Confidence 11 3444 33 3789999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEcCCCCCCCCCCCcc--CCCCCCCCCCCcchHHHHHhchhee
Q 009407 466 EAGQVGINVPIPVPLPFFSFT--GSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 466 ~~G~V~iN~~~~~~~~~~pfG--G~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
++|.|+||++..+. +..||| +.-+-.+++.+.+|+.+++.||+.|
T Consensus 352 ~~G~v~iN~~~~~~-~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 352 DSAAVYHNASTRFT-DGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CeeEEEEeCCCCcC-CCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 99999999986543 457887 2112335777899999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-68 Score=551.23 Aligned_cols=363 Identities=37% Similarity=0.533 Sum_probs=336.9
Q ss_pred HHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCC
Q 009407 86 AAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVS 165 (535)
Q Consensus 86 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 165 (535)
+|++|+++|++++.++|.++|+++++.|.++.++|+++++.|+|||..+++.|+..+++.+++++.......+.......
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 57899999999999999999999999999999999999999999999999999999999999998877665543333234
Q ss_pred CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh-h
Q 009407 166 NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH-D 244 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~-~ 244 (535)
.+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|+. +
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 566788999999999999999999999999999999999999999999999999999999999999999999999954 4
Q ss_pred HHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceE
Q 009407 245 TVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV 324 (535)
Q Consensus 245 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~v 324 (535)
.++.|+.|+++|.|+||||+++++.|.+.++++++|+++|+||+|++||++|||++.|++.+++++|.++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccE
Q 009407 325 VFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPT 403 (535)
Q Consensus 325 lv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Pt 403 (535)
+++++ +|+|+++|+ |
T Consensus 242 ~v~~~~~~~f~~~l~----------------------------------------------------------------t 257 (367)
T cd06534 242 LVHESIYDEFVEKLV----------------------------------------------------------------T 257 (367)
T ss_pred EEcHHHHHHHHHhhc----------------------------------------------------------------e
Confidence 77766 788888776 5
Q ss_pred EEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCC
Q 009407 404 ILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFF 483 (535)
Q Consensus 404 vl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~ 483 (535)
|+.++++++++++||+|||+++|++|++++||++++|++++||++||||+|.+.++++++++++|+|+||+++....+.+
T Consensus 258 l~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~ 337 (367)
T cd06534 258 VLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEA 337 (367)
T ss_pred eeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 56677888999999999999999999999999999999999999999999999999999999999999999865436789
Q ss_pred CccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 484 SFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 484 pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||||.+.||+|+ ++|++++++||+.|+|+
T Consensus 338 pfgg~~~sG~g~--~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 338 PFGGVKNSGIGR--EGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCcccCccCC--CChHHHHHHhceEEEEe
Confidence 999999999994 68999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=313.51 Aligned_cols=384 Identities=20% Similarity=0.255 Sum_probs=313.7
Q ss_pred HHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH----Hhh--------hhHHHHHHH
Q 009407 78 EEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK----DAQ--------GDVFRGLEV 145 (535)
Q Consensus 78 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~~ 145 (535)
.++.+..+.|++|...++.++.++|.+.|.++++.|+.+.++|.++...|.-.... ++. ..+..+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999988776532221 111 124555666
Q ss_pred HHHHHhhHHHhcCcccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHH
Q 009407 146 VEHSCGMATLQMGEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223 (535)
Q Consensus 146 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 223 (535)
++..+.+.+.+. +.+. ..+.|...+..|.|+||+++| |..-.+.++...+.||++||+||||.+..+..++..++
T Consensus 83 l~~Va~L~DPvG-ev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDPVG-EVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCchH-hhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 666666554432 2211 234678889999999999999 66666888888999999999999999999999998888
Q ss_pred HHH----HHcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCC
Q 009407 224 ELA----MEAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDA 297 (535)
Q Consensus 224 ~~l----~~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dA 297 (535)
+++ .++|+|++.||+++. ++ .+.+.|..+..||.|+..||..--+.|.+.+. .||+-.+-|++.++|+.+|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccC
Confidence 775 677999999999997 44 45666677888999999999999888887764 7888888899999999999
Q ss_pred CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 009407 298 NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGI 376 (535)
Q Consensus 298 dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 376 (535)
|+|+|.+.++.++....+ .|++.+.++||+. .++|+.+|.+.+..
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~--------------------------------- 282 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE--------------------------------- 282 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh---------------------------------
Confidence 999999999999999998 9999999987777 79999999887752
Q ss_pred HcCCEEEeccccccCCCCCCCceeccEEEec--CCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 377 ESGARLLLDGRNIVVPGYEHGNFIGPTILTD--VTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 377 ~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~--v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
.|.++....... .++.+ .+....-|..|...+++.|..+++.+|||+++|..+.+||-+|.|+|
T Consensus 283 -~gvelr~d~~~~-------------~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~ 348 (417)
T COG0014 283 -AGVELRGDAEAL-------------ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITED 348 (417)
T ss_pred -cCeEEEcCHHHH-------------HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCC
Confidence 344443221110 01111 33334447889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCC-CCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPL-PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~-~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
...+++|.+.+++..||||.++.|.+ +++.||..-+.++...+-+|+.||+++|..|++..
T Consensus 349 ~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~ 410 (417)
T COG0014 349 YANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVR 410 (417)
T ss_pred HHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEe
Confidence 99999999999999999999998876 56788877666677778899999999999999864
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=291.59 Aligned_cols=359 Identities=14% Similarity=0.149 Sum_probs=253.5
Q ss_pred HHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHH--
Q 009407 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRR----DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC-- 150 (535)
Q Consensus 77 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~-- 150 (535)
.++++..++..+...+....++.++..+++.++++.+.. .+.+..+.+..-+|.+...-+..+......++...
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l~ 83 (422)
T cd07080 4 APDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENLE 83 (422)
T ss_pred HHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHHH
Confidence 445566666555555566677777777777777777742 34455566666667765544444443433333111
Q ss_pred hh-HHHhc-CccccCCCC-CceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH
Q 009407 151 GM-ATLQM-GEYVPNVSN-GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM 227 (535)
Q Consensus 151 ~~-~~~~~-~~~~~~~~~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~ 227 (535)
.. ...+. ...+..... +...++.++|+|||++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.++|.
T Consensus 84 ~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~ 162 (422)
T cd07080 84 RILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLA 162 (422)
T ss_pred HHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHH
Confidence 11 11111 112221221 445678899999999999999999 799999999999999999999999999999999999
Q ss_pred HcCCCc----Cceecc--cCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCc-ceeeeCCCC--
Q 009407 228 EAGLPD----GVLNIV--HGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK-NHGIVLPDA-- 297 (535)
Q Consensus 228 ~aGlP~----g~v~vv--~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~-~p~iV~~dA-- 297 (535)
++ +|+ +.++++ +|+ .+.++.|+.++ |.|+||||+++++.|++.++.+ +.++|+||| +++|+.+++
T Consensus 163 ~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~ 237 (422)
T cd07080 163 DV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALE 237 (422)
T ss_pred hc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhc
Confidence 99 787 888888 454 44788899887 9999999999999999998854 569999999 555555568
Q ss_pred --CHHHHHHHHHHHHhhccCCCccCcceEEEeCC----hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 298 --NMDATLNALAAAGFGAAGQRCMALSTVVFVGD----SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 298 --dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~----~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++.+++.+++++|.|+||.|+|+++|||+.+ .++|.++|.++++++.-..|... + +.....++...
T Consensus 238 ~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~~------~-~~~~~~~~~~~ 310 (422)
T cd07080 238 SEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPALS------L-SAAESAKIARA 310 (422)
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCCC------C-CHHHHHHHHHH
Confidence 99999999999999999999999999988766 26899999999988765444322 1 34444444443
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
-..+...+.+....+ +.++ ||+..-.+. + .....+-.+.|+++++++|++..++. +=.|++++
T Consensus 311 r~~~~~~~~~~~~~~--------~~~~----~v~~~~~~~--~-~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~ 373 (422)
T cd07080 311 RLEAEFYELKGGVSR--------DLGW----TVIISDEIG--L-EASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLA 373 (422)
T ss_pred HHHHHHHHHhcCCCC--------CCCe----EEEEeCCCC--c-cCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEee
Confidence 333332222211100 1222 444332222 2 11455677889999999999999986 66799999
Q ss_pred cCCHHHHHHHHhhcc
Q 009407 452 TSSGAAARKFQTEIE 466 (535)
Q Consensus 452 t~d~~~a~~~~~~l~ 466 (535)
..+.+. .++++++.
T Consensus 374 ~~~~~~-~~~~~~l~ 387 (422)
T cd07080 374 PSPAEL-AELADALA 387 (422)
T ss_pred cChhhH-HHHHHHHH
Confidence 998887 77777775
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=242.60 Aligned_cols=382 Identities=17% Similarity=0.194 Sum_probs=297.1
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------HhCCChHHh-h-----hhHHHHHHHHH
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITT------EQGKTLKDA-Q-----GDVFRGLEVVE 147 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a-~-----~ev~~~~~~l~ 147 (535)
+++..+.||.+.+.++.++.++|.++|.++++.|..+..++.++... +.|.....- + ..+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35667889999999999999999999999999999988777765544 444221110 1 12333334445
Q ss_pred HHHhhHHHhcCcccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHH
Q 009407 148 HSCGMATLQMGEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAEL 225 (535)
Q Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~ 225 (535)
..++..+.. |+.+. ....+...+....|+||.++| |....-........|++.||.+++|....+..+...|.++
T Consensus 82 ~ia~~edpv-GRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAELEDPV-GRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHhcccch-hhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 444432221 22211 134566778888999999999 7666666666677899999999999999999999888877
Q ss_pred HHHc----CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHH
Q 009407 226 AMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDA 301 (535)
Q Consensus 226 l~~a----GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~ 301 (535)
..++ |.|.+.|++|+...++.+.|..+..||.|+..||+.-.+.|..... +||...-.|.+.++|++|||+++
T Consensus 159 v~~al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~k 235 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLDK 235 (433)
T ss_pred HHHHhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHHH
Confidence 7655 7789999999987788888888888999999999999999887754 89999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcC
Q 009407 302 TLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG 379 (535)
Q Consensus 302 Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G 379 (535)
|.+.+..+++.+.- .|++.+.+++++. ...|++.|...++ .+|
T Consensus 236 A~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~g 280 (433)
T KOG4165|consen 236 AKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EEG 280 (433)
T ss_pred HHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hcC
Confidence 99999999999987 9999999988775 3556666655443 456
Q ss_pred CEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHH
Q 009407 380 ARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459 (535)
Q Consensus 380 a~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~ 459 (535)
.++.+|.+ .. .-..| -++...-+..|.-.-.+++-.+++.++||+.+|..+.+|+-+|.|+|.+.++
T Consensus 281 Vtl~agpk-l~----~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae 347 (433)
T KOG4165|consen 281 VTLHAGPK-LA----ALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAE 347 (433)
T ss_pred eEEecChh-HH----hhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHH
Confidence 66654432 11 11111 1344455778888888999999999999999999999999999999999999
Q ss_pred HHHhhcceeEEEEcCCCCCCCC-CCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 460 KFQTEIEAGQVGINVPIPVPLP-FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 460 ~~~~~l~~G~V~iN~~~~~~~~-~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|.+.+++..|++|.++.|++. ++.+|..-+.++++.+.+|+-|++..+..||+..
T Consensus 348 ~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lR 404 (433)
T KOG4165|consen 348 HFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLR 404 (433)
T ss_pred HHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEe
Confidence 9999999999999999988753 3555554455567778899999999999998754
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.6e-15 Score=155.85 Aligned_cols=375 Identities=14% Similarity=0.106 Sum_probs=236.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHH--hh-HHHh-cCccccCCCCCce
Q 009407 96 NTPITTRQRVMLKLQELIRRD--IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSC--GM-ATLQ-MGEYVPNVSNGID 169 (535)
Q Consensus 96 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~--~~-~~~~-~~~~~~~~~~~~~ 169 (535)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. +.....+++.-. .. ...+ ....+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 456666677777777766552 222555566666776655543 333333222110 00 0111 1112221222233
Q ss_pred eeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCc----Cceecc--cC-C
Q 009407 170 TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPD----GVLNIV--HG-T 242 (535)
Q Consensus 170 ~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~----g~v~vv--~g-~ 242 (535)
.+..+.|.|+++.|.|.|-|+.. ++.++.+|++||..|+|+|+..+.++..|.+.|.+. .|. ..+.++ ++ +
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 67789999999999999999654 556788999999999999999999999999999886 554 345666 33 4
Q ss_pred hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcc
Q 009407 243 HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALS 322 (535)
Q Consensus 243 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~ 322 (535)
.+..+.+..+ .|.|+.+||.++.+.|.+.+ ....+.+....-.+-.+|..+++++.+++.+..-.+.+.+|.|.|++
T Consensus 159 ~~~~~~~~~~--~D~vv~wGgd~ti~~ir~~~-~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~ 235 (399)
T PF05893_consen 159 EELEEALSQQ--ADAVVAWGGDETIRAIRQPL-PPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQ 235 (399)
T ss_pred hHHHHHHHHH--CCEEEEeCCHHHHHHHHHHc-CCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCe
Confidence 5566777654 79999999999999998843 33456666666778888999999999999999999999999999999
Q ss_pred eEEEeCC----hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHH-----HHHHcCCEEEeccccccCCC
Q 009407 323 TVVFVGD----SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQ-----SGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 323 ~vlv~~~----~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~~~~ 393 (535)
.||+..+ .++|.++|.+++++..--.|... .+......+....+ .+...+.+++ ++.
T Consensus 236 ~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~------ 301 (399)
T PF05893_consen 236 VIFVETGDGDSVEEFAERLAEALERAAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSD------ 301 (399)
T ss_pred EEEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecC------
Confidence 9977622 47888998888765432222211 12222223333222 2333343444 221
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-ceeEEEE
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI-EAGQVGI 472 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l-~~G~V~i 472 (535)
.+ ..||+....+ ......++-.+.|+++++.+|++..++....=.|++++... +...++++.+ ..|.-.|
T Consensus 302 --~~---~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~Gv~Ri 372 (399)
T PF05893_consen 302 --DN---SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAGVDRI 372 (399)
T ss_pred --CC---CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcCCeee
Confidence 12 1355543221 12334456688899999999999999987432478887554 4455666533 3453222
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 473 NVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 473 N~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
= |.|-+..--.|. .+-|.+-|..|+++
T Consensus 373 v----------~~G~m~~~~~g~-~hDG~~~L~~lvRw 399 (399)
T PF05893_consen 373 V----------PLGQMLDFDPGW-PHDGMYPLRRLVRW 399 (399)
T ss_pred C----------CCCcCCCCCCCC-CcCCHhHHHHHhCC
Confidence 2 223222111222 35677888888763
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-16 Score=134.75 Aligned_cols=152 Identities=60% Similarity=0.976 Sum_probs=128.5
Q ss_pred EeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEE
Q 009407 326 FVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTIL 405 (535)
Q Consensus 326 v~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl 405 (535)
++.+...+.+.|++..+.+++-+...+++|. .+..+++.++|+.- +...|.-.....+.+|+|..||+|
T Consensus 4 ~vg~aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~------~~~~~r~~yl~~ya~~~f~~~tiL 72 (157)
T KOG2449|consen 4 MVGAAKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSE------DPLDGRFIYLPGYAEGNFVGPTIL 72 (157)
T ss_pred EechhhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCc------CccCCceEEeeccccCCcccceEE
Confidence 4455677899999999999998888889887 77888999998861 333333333345678999999999
Q ss_pred ecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCc
Q 009407 406 TDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSF 485 (535)
Q Consensus 406 ~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pf 485 (535)
. |+|+|.++.||+||||+....-++++|+|.++|+++||-...|||.+.+.++++....++|.+.+|.+.+...+...|
T Consensus 73 s-vtP~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sf 151 (157)
T KOG2449|consen 73 S-VTPNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSF 151 (157)
T ss_pred E-ecCCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceec
Confidence 8 999999999999999999999999999999999999999999999999999999999999999999986554556666
Q ss_pred cCCC
Q 009407 486 TGSK 489 (535)
Q Consensus 486 GG~~ 489 (535)
.|-+
T Consensus 152 sg~~ 155 (157)
T KOG2449|consen 152 SGDR 155 (157)
T ss_pred cccC
Confidence 6543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=94.82 Aligned_cols=163 Identities=17% Similarity=0.188 Sum_probs=121.3
Q ss_pred cceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHH
Q 009407 288 KNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKE 366 (535)
Q Consensus 288 ~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~ 366 (535)
..-+||++|.|++.|+..++.+.-.--| ..+.-.|+|++. .|+|+++++.+++.+. +.+ -+...+.
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~ 71 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYL 71 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHH
Confidence 3458999999999999999999765444 335556766555 7999999999887543 322 2334455
Q ss_pred HHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcC--CC
Q 009407 367 RICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKN--QY 444 (535)
Q Consensus 367 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~--~~ 444 (535)
|..+.++ .-+++.+.++.... -..-.|.++.+++.+. +.. --.+|+++..|++..||+++++.. .|
T Consensus 72 rsl~~i~---~l~~~~I~~~~~~~------~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f 139 (215)
T PF07368_consen 72 RSLKKIK---CLNAKTIVADFENV------PPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPF 139 (215)
T ss_pred HHHHHHH---hcCCeEEEecccCC------CCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCc
Confidence 5555555 46899988743211 1122599988776542 232 445899999999999999999974 55
Q ss_pred CcEEEEecCCHHHHHHHHhhcceeEEEEcCCC
Q 009407 445 GNGAAIFTSSGAAARKFQTEIEAGQVGINVPI 476 (535)
Q Consensus 445 gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~ 476 (535)
+ |.|||++-.+.+-+++.+|++..++||+..
T Consensus 140 ~-SVsiW~ekla~~Yel~~~l~~~~f~iNC~~ 170 (215)
T PF07368_consen 140 D-SVSIWNEKLASAYELAARLPCDTFYINCFN 170 (215)
T ss_pred c-eEEEeCcHHHHHHHHHHhCCCCEEEEEecc
Confidence 5 999999999999999999999999999974
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.2e-07 Score=109.18 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=86.5
Q ss_pred cccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecc
Q 009407 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239 (535)
Q Consensus 160 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv 239 (535)
.+| ++.|..+..+..|+|+++||+||| ...+.+++.||++||+||+||++.++. .+ +.+|..+.+.+
T Consensus 1063 ~LP-GPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~--~~Lp~~~~~~~ 1129 (1208)
T PRK11905 1063 ELP-GPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------AL--ADLPGLVAARI 1129 (1208)
T ss_pred cCC-CCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HH--HhCcccccccc
Confidence 445 778999999999999999999999 557889999999999999999987652 11 23565555444
Q ss_pred cCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC---CeEEEeCC
Q 009407 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG---KRVQSNMG 286 (535)
Q Consensus 240 ~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~---~~v~lelg 286 (535)
..+..+..+++|+.|.|||++++.+.|.+..+.+. .|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 23456778888999999999999999999888763 45555554
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.071 Score=55.68 Aligned_cols=261 Identities=16% Similarity=0.141 Sum_probs=122.0
Q ss_pred CCceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeee--cCCCCChHHHHHHHHHHHHcCCCcCceeccc
Q 009407 166 NGIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVL--KPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~ 240 (535)
+|......+.|+--|++..|. -||.. ++..++||-.+|..=|+ -|....-...-.+.-....+|+.+ |-.+
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pSt-vlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e--vy~v- 171 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE--VYKV- 171 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THH-HHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE--EEE--
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHH-HHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE--EEec-
Confidence 466677889999999999994 35533 44557799999976544 444332222333444456677654 2222
Q ss_pred CChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEe-CCCcce--eeeCCCCCHHHHHHHHHHHHhhc
Q 009407 241 GTHDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQSN-MGAKNH--GIVLPDANMDATLNALAAAGFGA 313 (535)
Q Consensus 241 g~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~le-lgG~~p--~iV~~dAdl~~Aa~~iv~~~~~~ 313 (535)
|+.+...+|.- -|.||+|+=.|..-+..+=..... .|-.. +.|.+= +|-+++||.+..+..++.-+=+.
T Consensus 172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 44444455553 488999998888765443222222 12221 224443 44556799998888887665554
Q ss_pred cCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCC
Q 009407 314 AGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 314 ~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 393 (535)
.. .+.+++..+ +++.+++.+++.+.--.-| . .+.++.+.+
T Consensus 248 ~~-----a~~vLvt~s-~~la~~V~~~v~~~l~~l~-----------r-------~~i~~~sl~---------------- 287 (412)
T PF00815_consen 248 PD-----AQAVLVTTS-EELAEAVEAEVERQLEELP-----------R-------REIAEKSLE---------------- 287 (412)
T ss_dssp TT------EEEEEES--HHHHHHHHHHHHHHHTT-T-----------T-------HHHHHHHHT----------------
T ss_pred CC-----CceEEEECC-HHHHHHHHHHHHHHHHhCC-----------c-------hHHHHHHHH----------------
Confidence 43 222444444 4455555544432110000 0 011111111
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGI 472 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~i 472 (535)
--.++.++|++||++++|..--= -..|.++|+ +++..+++ +|.|++
T Consensus 288 -----------------------------~g~ii~~~~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AGaiFl 334 (412)
T PF00815_consen 288 -----------------------------NGAIIVVDSLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAGAIFL 334 (412)
T ss_dssp -----------------------------T-EEEE-SSHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-SEEEE
T ss_pred -----------------------------CCeEEEECCHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccChhhc
Confidence 11366788999999999995443 367889996 46677776 899999
Q ss_pred cCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 473 NVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 473 N~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
..+++ ..++-+|-+|. + ++.|..+...|++..++.
T Consensus 335 G~~tp~a~GDY~aGpNHvLPT~G~-----A--R~~sgLsv~~FlK~~s~~ 377 (412)
T PF00815_consen 335 GEYTPEALGDYAAGPNHVLPTGGT-----A--RFSSGLSVDDFLKRISVQ 377 (412)
T ss_dssp STT--HHHHHHTSSS------TTG-----G--GT---S-GGGGEEEEEEE
T ss_pred CCCCCHHHhhhccCCCccCCCCcc-----c--cccCCCcHHHccceeeEE
Confidence 97642 23455777654 3 344555678888776543
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.36 Score=50.24 Aligned_cols=262 Identities=17% Similarity=0.174 Sum_probs=147.7
Q ss_pred CCCceeeeeeccCceEEeecC---CCcchhhHhhhhhhhhhcCCeeee--cCCCCChHHHHHHHHHHHHcCCCcCceecc
Q 009407 165 SNGIDTYSLREPLGVCAGICP---FNFPAMIPLWMFPVAVTCGNTFVL--KPSEKDPGASIMLAELAMEAGLPDGVLNIV 239 (535)
Q Consensus 165 ~~~~~~~~~~~P~GVv~~I~p---~N~P~~~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~g~v~vv 239 (535)
.+|.....++.|+--|++..| .-||...++ ..+||-.+|+.=|+ -|.+..- .+..+.-..+.+|+.+ |--+
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM-~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e--Iy~v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPSTVLM-NAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE--VYKV 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChHHHHH-hhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH--HHHc
Confidence 456777788999999999999 567755544 46799999986544 4544322 2222333335555543 1112
Q ss_pred cCChhHHHHHHhC----CCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcce--eeeCCCCCHHHHHHHHHHHHhhc
Q 009407 240 HGTHDTVNAICDD----ANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNH--GIVLPDANMDATLNALAAAGFGA 313 (535)
Q Consensus 240 ~g~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p--~iV~~dAdl~~Aa~~iv~~~~~~ 313 (535)
|+.+...+|.-. +.||+|+=.|..-+..+=..-.. ..-+=+. .|.+= +|-+++||.+..+..++.-+=++
T Consensus 181 -GGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g--~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQAEHd 256 (425)
T COG0141 181 -GGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG--VVGIDMI-AGPSEVLVIADETANPDFVAADLLSQAEHD 256 (425)
T ss_pred -cCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC--CcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhhcC
Confidence 455656667655 78999998887755332111111 1111111 23333 33444599999888877655543
Q ss_pred cCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCC
Q 009407 314 AGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 314 ~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 393 (535)
. .+. .|++.+ ++++.++..+++.+..-- ..+ .+.+..+..
T Consensus 257 ~----~a~-aiLvT~-s~~la~~v~~~v~~~l~~-----------------l~~-~ei~~~~l~---------------- 296 (425)
T COG0141 257 P----DAQ-AILVTD-SEELAEAVEAAVERQLET-----------------LPR-AEIARKALE---------------- 296 (425)
T ss_pred C----Cce-EEEEeC-cHHHHHHHHHHHHHHHHh-----------------ccH-HHHHHHHHH----------------
Confidence 3 232 343444 455666665555421100 000 111111110
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGI 472 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~i 472 (535)
-|| .|+-++|++|+++++|..--- -.-|.++|+. .+..+++ +|.|++
T Consensus 297 -------------------------~~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsIFl 344 (425)
T COG0141 297 -------------------------NYG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSIFL 344 (425)
T ss_pred -------------------------hCC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhcccceeee
Confidence 011 366778999999999986443 3567888865 5666775 899999
Q ss_pred cCCCCC--------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 473 NVPIPV--------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 473 N~~~~~--------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
..+++- .++-+|-+|+- ++.+..++..|+..-++
T Consensus 345 G~~sPe~~GDY~aG~NHVLPT~g~A-------R~~s~L~v~dF~K~~tv 386 (425)
T COG0141 345 GHYSPESLGDYAAGPNHVLPTSGTA-------RFSSGLSVYDFLKRSTV 386 (425)
T ss_pred cCCCCccccccccCCCccCCCCccc-------hhcCCccHHHhhhHHHH
Confidence 986531 22345655432 34455567888776543
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.76 Score=47.75 Aligned_cols=262 Identities=19% Similarity=0.185 Sum_probs=146.2
Q ss_pred CCCceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeee--cCCCC-ChHHHHHHHHHHHHcCCCcCceec
Q 009407 165 SNGIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVL--KPSEK-DPGASIMLAELAMEAGLPDGVLNI 238 (535)
Q Consensus 165 ~~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~-~~~~~~~l~~~l~~aGlP~g~v~v 238 (535)
.+|.....++.|+--|++..|. -||.. ++...+||-.+|+.=|+ -|... -......|+ ..+.+|+.+ |--
T Consensus 77 ~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~ 152 (393)
T TIGR00069 77 EPGVILGQRVRPLERVGLYVPGGRAPYPST-VLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKLAGVDE--VYK 152 (393)
T ss_pred CCCeEEEEEEEEeheEEEEeCCCCCcchHH-HHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHHcCCCe--ehh
Confidence 3566677889999999999997 35543 44457799999986554 44421 112222233 446677664 222
Q ss_pred ccCChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcce--eeeCCCCCHHHHHHHHHHHHh
Q 009407 239 VHGTHDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNH--GIVLPDANMDATLNALAAAGF 311 (535)
Q Consensus 239 v~g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p--~iV~~dAdl~~Aa~~iv~~~~ 311 (535)
+ |+.+...+|. .-|.||.|+=.|..-+..+=..... .+-..+ .|.+= +|-+++||.+..+..++.-+=
T Consensus 153 v-GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAE 227 (393)
T TIGR00069 153 V-GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAE 227 (393)
T ss_pred c-CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence 2 4555545554 3478999998887755332111111 222222 24443 344455899988888776554
Q ss_pred hccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccC
Q 009407 312 GAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391 (535)
Q Consensus 312 ~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 391 (535)
+... + +.+++..+ .++.++..+++.+..-.-| . .+.++.+.++
T Consensus 228 Hd~~----a-~~iLvT~s-~~la~~V~~~v~~ql~~l~--------------r----~~i~~~al~~------------- 270 (393)
T TIGR00069 228 HDPD----A-QAILVTTS-EELAEAVQEEIERQLATLP--------------R----REIARKSLED------------- 270 (393)
T ss_pred cCCC----C-cEEEEECC-HHHHHHHHHHHHHHHHhCC--------------h----HHHHHHHHHh-------------
Confidence 4332 2 23434443 3445555444432110000 0 1112222211
Q ss_pred CCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEE
Q 009407 392 PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQV 470 (535)
Q Consensus 392 ~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V 470 (535)
+| .++-++|++||++++|..---| .-|+++|+. ++..+++ +|.|
T Consensus 271 ----------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGai 315 (393)
T TIGR00069 271 ----------------------------NG---AIILVDDLEEAIEISNDYAPEH-LELQTKNPE---ELLPKIRNAGSI 315 (393)
T ss_pred ----------------------------CC---EEEEECCHHHHHHHHHhhChHh-heehhCCHH---HHHhhcCcccee
Confidence 11 2466789999999999964432 457888864 5666665 8999
Q ss_pred EEcCCCC--C------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 471 GINVPIP--V------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 471 ~iN~~~~--~------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
++..+++ + .++-+|-||. + ++.+..+...|+++.++.
T Consensus 316 FlG~~tp~a~GDY~aG~NHvLPT~G~-----A--r~~sgL~v~~F~K~~s~~ 360 (393)
T TIGR00069 316 FLGPYTPEAAGDYAAGPNHVLPTGGT-----A--RFYSGLSVLDFLKRITVQ 360 (393)
T ss_pred ccCCCCchhhhhccCCCCcccCCCcc-----e--eecCCccHHHhccceeEE
Confidence 9976542 1 2344666554 3 344555688888876654
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.88 Score=47.85 Aligned_cols=261 Identities=16% Similarity=0.168 Sum_probs=145.2
Q ss_pred CCceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeee--cCCCCChHHHHHHHHHHHHcCCCcCceeccc
Q 009407 166 NGIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVL--KPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~ 240 (535)
+|...-..+.|+--|++..|. -||.. ++...+||-.+|..=|+ -|...-. ..-.+.-....+|+.+ |--+
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSS-VLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV- 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHH-HHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence 456667789999999999997 35544 44557799999986554 4443111 2222222446667654 2222
Q ss_pred CChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEe-CCCcceee--eCCCCCHHHHHHHHHHHHhhc
Q 009407 241 GTHDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKRVQSN-MGAKNHGI--VLPDANMDATLNALAAAGFGA 313 (535)
Q Consensus 241 g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~le-lgG~~p~i--V~~dAdl~~Aa~~iv~~~~~~ 313 (535)
|+.+...+|. .-|.||.|+=.|..-+..+=..... .|-.. +.|.+=++ -+++||.+..+..++.-+=+.
T Consensus 185 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 260 (425)
T PRK00877 185 GGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG----VVGIDMIAGPSEILVIADETADPDFVAADLLSQAEHD 260 (425)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC----CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 4555555554 3468999998887655332111111 12121 23444433 344589998888877655443
Q ss_pred cCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCC
Q 009407 314 AGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 314 ~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 393 (535)
.. + +.+++..+ .++.+++.+++.+.----| . .+.++.+.+.
T Consensus 261 ~~----a-~aiLvT~s-~~la~~V~~~v~~ql~~l~-----------r-------~~ia~~sl~~--------------- 301 (425)
T PRK00877 261 PD----A-QSILVTTS-EELAEAVAAEVERQLATLP-----------R-------AEIARASLEG--------------- 301 (425)
T ss_pred CC----C-cEEEEECC-HHHHHHHHHHHHHHHHhCC-----------h-------HHHHHHHHHh---------------
Confidence 32 2 23434443 4455555444432100000 0 0111222111
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGI 472 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~i 472 (535)
+| .++-++|+|||++++|..--=| .-|.++|+. .+..+++ +|.|++
T Consensus 302 --------------------------~g---~iivv~~leeai~~~N~~APEH-Lel~~~~p~---~~l~~I~nAGaiFl 348 (425)
T PRK00877 302 --------------------------QG---AIILVDDLEEAIELSNAYAPEH-LEIQTEDPR---ALLDRIRNAGAIFL 348 (425)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChHh-eeehhCCHH---HHHhhcCccceecc
Confidence 11 2466789999999999964432 558888864 5566665 899999
Q ss_pred cCCCC--C------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 473 NVPIP--V------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 473 N~~~~--~------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
..+++ + .++-+|-||. . ++.|..+...|++..++.
T Consensus 349 G~~tp~a~GDY~aGpNHvLPT~G~-----A--R~~sgLsV~~F~K~~s~~ 391 (425)
T PRK00877 349 GPYTPESLGDYAAGPNHVLPTSGT-----A--RFSSGLSVYDFLKRSSVI 391 (425)
T ss_pred CCCCchhhhhcccCCCcccCCCcc-----e--eecCCccHHHhccceeEE
Confidence 76542 1 2334666543 3 345566788888876553
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=1.2 Score=46.79 Aligned_cols=261 Identities=18% Similarity=0.188 Sum_probs=145.5
Q ss_pred CCceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeee--cCCCCC-hHHHHHHHHHHHHcCCCcCceecc
Q 009407 166 NGIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVL--KPSEKD-PGASIMLAELAMEAGLPDGVLNIV 239 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~~-~~~~~~l~~~l~~aGlP~g~v~vv 239 (535)
+|.....++.|+.-|++..|. -||.. ++..++||-.+|..=|+ -|.... ......|+ ..+.+|+.+ |--+
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e--Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPST-ALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH--ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHH-HHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe--eecc
Confidence 466667889999999999997 35543 44557899999986544 444321 12222233 446677664 2222
Q ss_pred cCChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCe--EEEeC-CCcceeee--CCCCCHHHHHHHHHHHH
Q 009407 240 HGTHDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKR--VQSNM-GAKNHGIV--LPDANMDATLNALAAAG 310 (535)
Q Consensus 240 ~g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~--v~lel-gG~~p~iV--~~dAdl~~Aa~~iv~~~ 310 (535)
|+.+...+|. .-|.||.|+=.|..-+..+=.... +.+ |-..+ .|.+=++| +++||.+.++..++.-+
T Consensus 186 -GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~---G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQA 261 (431)
T PLN02926 186 -GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQ---NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQA 261 (431)
T ss_pred -CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhh---CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 4555555554 346899999888775533211111 110 22222 34444433 44589998888887655
Q ss_pred hhccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccccc
Q 009407 311 FGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390 (535)
Q Consensus 311 ~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 390 (535)
=+... + +.+++..+ .++.+++.+++.+.----| . .+.++.+.
T Consensus 262 EHdp~----a-~aiLvT~s-~~la~~V~~~v~~ql~~l~-----------r-------~~i~~~sl-------------- 303 (431)
T PLN02926 262 EHGPD----S-QVVLVAVG-DVDLDAIEEEVEKQCQSLP-----------R-------GEIASKAL-------------- 303 (431)
T ss_pred ccCCC----C-cEEEEECC-HHHHHHHHHHHHHHHHhCC-----------h-------HHHHHHHH--------------
Confidence 54332 2 23434444 3445444444332100000 0 01111111
Q ss_pred CCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeE
Q 009407 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQ 469 (535)
Q Consensus 391 ~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~ 469 (535)
.. -.++-++|++||++++|..--=| ..|.++|+. .+..+++ +|.
T Consensus 304 ------------------------------~~-g~iivv~~l~ea~~~~N~~APEH-Lei~~~~~~---~~l~~i~nAGa 348 (431)
T PLN02926 304 ------------------------------GH-SFIVVARDMAEAISFSNLYAPEH-LIVNVEDAE---SWLDKIDNAGS 348 (431)
T ss_pred ------------------------------HC-CEEEEECCHHHHHHHHHhhChHh-heehhcCHH---HHHhhcCccce
Confidence 11 23667889999999999964332 458888864 5666665 899
Q ss_pred EEEcCCCC--C------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 470 VGINVPIP--V------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 470 V~iN~~~~--~------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|++..+++ + .++-+|-||. + ++.|..+...|.+.-++.
T Consensus 349 iFlG~~sp~a~GDY~aGpNHvLPT~G~-----A--R~~sgLsv~~FlK~~s~~ 394 (431)
T PLN02926 349 VFLGRWTPESVGDYASGTNHVLPTYGY-----A--RMYGGVSLDSFLKYMTVQ 394 (431)
T ss_pred eccCCCCchhhhccccCcCcccCCCcc-----e--eecCCCcHHHhcceeeEE
Confidence 99976542 1 2334666553 3 345556688888866543
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.58 E-value=1.2 Score=46.42 Aligned_cols=263 Identities=16% Similarity=0.146 Sum_probs=143.7
Q ss_pred CCceeeeeeccCceEEeecCCC-cchh-hHhhhhhhhhhcCCeeee--cCCCCChHHHHHHHHHHHHcCCCcCceecccC
Q 009407 166 NGIDTYSLREPLGVCAGICPFN-FPAM-IPLWMFPVAVTCGNTFVL--KPSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~N-~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g 241 (535)
.|.....++.|+--|++..|.- +|+. +++...+||-.+|+.=|+ -|..........+.-....+|+.+ |--+ |
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~aa~~~Gv~e--iy~v-G 158 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAILAAAKLAGVDE--IYKV-G 158 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHHHHHHHcCCcE--Eecc-C
Confidence 4677778899999999999964 3432 244557899999986554 444321111222222345666654 2222 4
Q ss_pred ChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEe-CCCcce--eeeCCCCCHHHHHHHHHHHHhhcc
Q 009407 242 THDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKRVQSN-MGAKNH--GIVLPDANMDATLNALAAAGFGAA 314 (535)
Q Consensus 242 ~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~le-lgG~~p--~iV~~dAdl~~Aa~~iv~~~~~~~ 314 (535)
+.+...+|. ..|.||.|+=.|..-+..+=..... .+-.. +.|.+= +|-+++||.+..+..++.-+=+..
T Consensus 159 GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~~ 234 (390)
T cd06572 159 GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG----DVGIDMPAGPSEVLVIADETANPEFVAADLLSQAEHDP 234 (390)
T ss_pred CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC----CcCccCCCCCceEEEEeCCCCCHHHHHHHHHhhhccCC
Confidence 555555555 3688999998886654332111111 11111 124443 344445899988877775544332
Q ss_pred CCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC
Q 009407 315 GQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394 (535)
Q Consensus 315 GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~ 394 (535)
.+ +.+++..+ .++.++..+.+.+..-.-| .. +.++.+..
T Consensus 235 ----~a-~aiLvT~s-~~la~~V~~~v~~ql~~l~-----------r~-------~~~~~~~~----------------- 273 (390)
T cd06572 235 ----DS-QAILVTTS-EELAEAVEEEVERQLAELP-----------RR-------EIAAKSLL----------------- 273 (390)
T ss_pred ----CC-eEEEEECC-HHHHHHHHHHHHHHHHhCC-----------cH-------HHHHHHHH-----------------
Confidence 22 23434443 4455555544432110000 00 01111110
Q ss_pred CCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEc
Q 009407 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGIN 473 (535)
Q Consensus 395 ~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~iN 473 (535)
---.++-++|++|+++++|..--= -.-|+++|+. .+..+++ +|.|++-
T Consensus 274 ---------------------------~~g~ii~~~~~~eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGsiFlG 322 (390)
T cd06572 274 ---------------------------DYGAIILVDDLEEAIELANEYAPE-HLELQTEDPE---ELLEKIRNAGSIFLG 322 (390)
T ss_pred ---------------------------hCCEEEEECCHHHHHHHHHhhchh-hheeHhcCHH---HHHhhCccceEEeec
Confidence 011356678999999999996443 2567888865 4566665 8999997
Q ss_pred CCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 474 VPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 474 ~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.+++ ..++-+|.+|.. ++.|..+...|++..++.
T Consensus 323 ~~tp~a~GDY~aGpNHvLPT~G~A-------r~~sgL~v~~F~K~~s~~ 364 (390)
T cd06572 323 PYTPEALGDYAAGPNHVLPTGGTA-------RFYSGLSVDDFLKRITVQ 364 (390)
T ss_pred CCCchhhhccccCCCCccCCCcce-------eecCCCCHHHheecceeE
Confidence 7542 123457776643 234445578888776543
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.51 E-value=1.4 Score=46.35 Aligned_cols=261 Identities=13% Similarity=0.137 Sum_probs=145.4
Q ss_pred CCceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeee--cCCCCChHHHHHHHHHHHHcCCCcCceeccc
Q 009407 166 NGIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVL--KPSEKDPGASIMLAELAMEAGLPDGVLNIVH 240 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~g~v~vv~ 240 (535)
.|.....++.|+--|++..|. -||.. ++...+||-.+|+.=|+ -|..........|+ ....+|+.+ |--+
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~v- 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVAS-AHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE--IYVL- 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHH-HHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe--ehhc-
Confidence 455667789999999999996 35533 44557899999986554 44432112222233 346666654 2222
Q ss_pred CChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcce--eeeCCCCCHHHHHHHHHHHHhhc
Q 009407 241 GTHDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNH--GIVLPDANMDATLNALAAAGFGA 313 (535)
Q Consensus 241 g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p--~iV~~dAdl~~Aa~~iv~~~~~~ 313 (535)
|+.+...+|. .-|.||.|+=.|..-+..+=..... .|-..+ .|.+= +|-+++||.+..+..++.-+=+.
T Consensus 180 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd 255 (426)
T PRK12447 180 GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQAEHG 255 (426)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhccC
Confidence 4555445554 3578999998887755332111111 122222 34443 34444589998888877655443
Q ss_pred cCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCC
Q 009407 314 AGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393 (535)
Q Consensus 314 ~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 393 (535)
.. + +.+++..+ .++.+++.+++++.--.-| . .+.++.+.++
T Consensus 256 ~~----a-~~iLvT~s-~~la~~V~~~v~~ql~~l~-----------r-------~~i~~~sl~~--------------- 296 (426)
T PRK12447 256 PN----S-PAVLITTS-RKLAEEVLAEIERLLAILP-----------T-------ADVASAAWRD--------------- 296 (426)
T ss_pred CC----C-ceEEEECC-HHHHHHHHHHHHHHHHhCC-----------H-------HHHHHHHHHh---------------
Confidence 32 2 22434443 4455555544432100000 0 0112222211
Q ss_pred CCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEE
Q 009407 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGI 472 (535)
Q Consensus 394 ~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~i 472 (535)
+| .++-++|++||++++|..--=| ..|.++|+ ..+..+++ +|.|++
T Consensus 297 --------------------------~g---~ii~v~~l~ea~~~~N~~APEH-Lel~~~~~---~~~l~~i~nAGaiFl 343 (426)
T PRK12447 297 --------------------------YG---EVILCDDLEEMVAEADRYASEH-VQVMTEDP---DWFLENMTNYGALFL 343 (426)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChHh-eeehhCCH---HHHHhhcCccceecc
Confidence 11 2466789999999999964432 45888886 46666675 899999
Q ss_pred cCCCC--C------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 473 NVPIP--V------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 473 N~~~~--~------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
..+++ + .++-+|-||. + ++.|..+...|.+.-++.
T Consensus 344 G~~sp~a~GDY~aGpNHvLPT~G~-----A--r~~sgLsv~~FlK~~s~~ 386 (426)
T PRK12447 344 GERTNVAYGDKVIGTNHVLPTSGA-----A--RYTGGLWVGKFLKTVTYQ 386 (426)
T ss_pred CCCCchhhhhcccCCCcccCCCcc-----e--eecCCCcHHHhccceeEE
Confidence 76542 1 2334666553 3 344556688888776543
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.01 Score=70.71 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=79.3
Q ss_pred cccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecc
Q 009407 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIV 239 (535)
Q Consensus 160 ~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv 239 (535)
.+| ++.|..+..+..|+|+|+++++-. ...+.+++.+|++||.+|+..++. .. +++ +++|+.+.+.+
T Consensus 1172 ~LP-GPTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~----~~~--~~Lp~~v~~~v 1238 (1318)
T PRK11809 1172 LLP-GPTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HR----ALV--AALPAAVQARI 1238 (1318)
T ss_pred cCC-CCCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hH----HHH--HhccHHHHhHh
Confidence 445 778999999999999999998733 357889999999999998865442 11 122 46999888876
Q ss_pred cCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEE
Q 009407 240 HGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQ 282 (535)
Q Consensus 240 ~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~ 282 (535)
.-. .........++.|.|.|..+..+.+.++.+.+.-+++
T Consensus 1239 ~~~---~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1239 QLA---KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred hhc---cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 321 1222233569999999999999999998888755544
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=3.2 Score=43.53 Aligned_cols=257 Identities=18% Similarity=0.205 Sum_probs=143.7
Q ss_pred CCceeeeeeccCceEEeecCC-C--cchhhHhhhhhhhhhcCCeeeec--CCCCChHHHHHHHHHHHHcCCCcCceeccc
Q 009407 166 NGIDTYSLREPLGVCAGICPF-N--FPAMIPLWMFPVAVTCGNTFVLK--PSEKDPGASIMLAELAMEAGLPDGVLNIVH 240 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~-N--~P~~~~~~~l~~ALaaGN~VVlK--ps~~~~~~~~~l~~~l~~aGlP~g~v~vv~ 240 (535)
.|.....++.|+--|++..|. . ||.. ++...+||-.+|+.=|+- |..........|+ ....+|+.+ |--+
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypSt-vLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e--Iy~i- 174 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPST-VLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYITQVNQ--VFQV- 174 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHH-HHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHHcCCCe--eecc-
Confidence 455666788999999999996 3 5533 445578999999876553 4332111222222 346666654 2222
Q ss_pred CChhHHHHHH----hCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcce--eeeCCCCCHHHHHHHHHHHHhhc
Q 009407 241 GTHDTVNAIC----DDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNH--GIVLPDANMDATLNALAAAGFGA 313 (535)
Q Consensus 241 g~~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p--~iV~~dAdl~~Aa~~iv~~~~~~ 313 (535)
|+.+...+|. .-|.||.|+=.|..-+..+=..... .+-..+ .|.+= +|-+++||.+..+..++.-+=+.
T Consensus 175 GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 250 (416)
T PRK13770 175 GGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHD 250 (416)
T ss_pred CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccC
Confidence 4555445554 3578999998887655332111111 122221 24443 44445589998888877655443
Q ss_pred cCCCccCcceEEEeCChhHHHHHHHHHHh----cccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccc
Q 009407 314 AGQRCMALSTVVFVGDSKSWEDKLVERAK----ALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389 (535)
Q Consensus 314 ~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~----~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 389 (535)
.. + +.+++..+ .++.+++.++++ .+. . .+.++.+.++
T Consensus 251 ~~----a-~~iLvT~s-~~la~~V~~ev~~ql~~lp---------------r-------~~i~~~al~~----------- 291 (416)
T PRK13770 251 EL----A-RTYVISED-AQVLKDLESRIAKALPNVD---------------R-------YDIVSKSIAN----------- 291 (416)
T ss_pred CC----C-cEEEEeCC-HHHHHHHHHHHHHHHHhCC---------------h-------HHHHHHHHHh-----------
Confidence 32 2 23434443 344444444433 211 0 0111221110
Q ss_pred cCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-ee
Q 009407 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AG 468 (535)
Q Consensus 390 ~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G 468 (535)
+| .++-++|+|||++++|..-.=| .-|.++|+ +.+..+++ +|
T Consensus 292 ------------------------------~g---~ii~v~~~eeai~~~N~~APEH-Lel~~~~~---~~~l~~i~nAG 334 (416)
T PRK13770 292 ------------------------------QH---YLIHASNFDEACHVMNTIAPEH-ASIQTVNP---QPYIEKVKYVG 334 (416)
T ss_pred ------------------------------CC---EEEEECCHHHHHHHHHhhChHh-heehhCCH---HHHHhhCCEec
Confidence 11 3566789999999999964432 45888886 46667776 89
Q ss_pred EEEEcCCCC--C------CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 469 QVGINVPIP--V------PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 469 ~V~iN~~~~--~------~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.|++..+++ + .++-+|-||.. ++.|..+...|++..++.
T Consensus 335 aiFlG~~sp~a~GDY~aGpNHvLPT~G~A-------R~~sgLsv~~FlK~~s~~ 381 (416)
T PRK13770 335 ALFIGHYSPEVIGDYVAGPSHVLPTNRTA-------RFTNGLSVNDFLTRNTVI 381 (416)
T ss_pred eeccCCCCchhhhccccCCCCcCCCCcce-------eccCCCcHHHeecceeeE
Confidence 999976542 1 23446666543 334455688888876553
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=9.7 Score=39.42 Aligned_cols=249 Identities=12% Similarity=0.107 Sum_probs=139.0
Q ss_pred CCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhH
Q 009407 166 NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDT 245 (535)
Q Consensus 166 ~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~ 245 (535)
+|...-.++.|+-.|++..|.-||. +++...+||-.+|+.=|+--+|-.......|+ ....+|+.+ |-.+ |+.+.
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL~-aa~~~Gv~e--Iy~v-GGAQA 157 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRGVTGELLA-VAKELGVKG--VLAI-GGPHG 157 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCCCCHHHHH-HHHHcCCCe--eecc-cCHHH
Confidence 5666677899999999999966663 34555789999998765543321112222233 446667654 2222 45454
Q ss_pred HHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCc-ceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcce
Q 009407 246 VNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAK-NHGIVLPDANMDATLNALAAAGFGAAGQRCMALST 323 (535)
Q Consensus 246 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~-~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~ 323 (535)
..++...-.||.|+=.|..-+..+=..... .+-..+ .|. --+||-++||.+..+..++.-+=+.. .+ +.
T Consensus 158 IAa~a~gt~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~----~a-~~ 228 (368)
T PRK13769 158 LAYAVFHMGVDMVAGPGGLYVQAAKYVLSQ----YVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGP----TS-FA 228 (368)
T ss_pred HHHHhcCCCcCEEECCCcHHHHHHHHHHhC----CcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCC----CC-cE
Confidence 456665558999998887755432111111 122221 233 33555556888887777765544322 22 23
Q ss_pred EEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccE
Q 009407 324 VVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPT 403 (535)
Q Consensus 324 vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Pt 403 (535)
+++.. ..++.+++.+++++. +. . + .|.
T Consensus 229 iLvT~-s~~la~~V~~~v~~~---------------------------~~----~-~---------------~~~----- 255 (368)
T PRK13769 229 YLLST-DAELLKAAEEIYRRE---------------------------RT----S-S---------------MGP----- 255 (368)
T ss_pred EEEEC-CHHHHHHHHHHHHHH---------------------------HH----h-c---------------CCC-----
Confidence 43433 345555555544320 00 0 0 000
Q ss_pred EEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEcCCCCC----
Q 009407 404 ILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGINVPIPV---- 478 (535)
Q Consensus 404 vl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~iN~~~~~---- 478 (535)
..++-++|++|+++++|..--=| ..|.+.+ .+..+++ +|.|+++.+..+
T Consensus 256 --------------------~~iivv~~leeai~~~N~~APEH-Lel~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~ 309 (368)
T PRK13769 256 --------------------LEVRKVAGVEEAVRFIDEIAPEH-LEVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYV 309 (368)
T ss_pred --------------------CeEEEECCHHHHHHHHHhhChHh-eEeeCcH-----HHHhhCCccCChhcCCchhhhccc
Confidence 24778899999999999954332 2333422 2455665 899999664322
Q ss_pred --CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 479 --PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 479 --~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.++-+|-||.. ++.|..+...|++..++.
T Consensus 310 aGpNHvLPT~G~A-------R~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 310 AGISHVLPTGGTA-------RWRGIITPLTFMKPIGVA 340 (368)
T ss_pred cCCCCcCCCCcce-------eccCCCcHHHcccceeEE
Confidence 23446666543 344555678888766543
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.36 E-value=12 Score=40.55 Aligned_cols=107 Identities=19% Similarity=0.185 Sum_probs=74.7
Q ss_pred CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCCh
Q 009407 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTH 243 (535)
Q Consensus 164 ~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~ 243 (535)
.+.|..+.....|.|-|+++.+ +....+.+++.+|++||.+++-+.+. ++.++. .+|.++-..+.-..
T Consensus 631 GptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~-------~aa~~~--~l~~~v~~~~~~~~ 698 (769)
T COG4230 631 GPTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSG-------LAALLK--DLPSAVASRIQVAK 698 (769)
T ss_pred CCcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcch-------HHHHHH--hchhhhhhheeecc
Confidence 5678888999999999999865 45677888999999999999866531 222222 36655422222111
Q ss_pred hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCC
Q 009407 244 DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG 286 (535)
Q Consensus 244 ~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelg 286 (535)
.. ...-.++.+.|.|..+-.+.+.+..+.+.-|++.-.+
T Consensus 699 ---~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 699 ---DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred ---ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 11 3334579999999999999999988777667666555
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 535 | ||||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-114 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-114 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 4e-61 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-59 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-59 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-59 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-58 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-58 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 5e-57 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 8e-55 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 6e-54 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-53 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-53 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 5e-52 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 7e-52 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-51 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 3e-51 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 4e-51 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 7e-51 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 6e-50 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 6e-50 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 9e-50 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-49 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-49 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-49 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 2e-49 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-49 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 3e-49 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 3e-49 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 9e-49 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-48 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-48 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 3e-48 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 6e-48 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 7e-48 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 8e-48 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-47 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 1e-47 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-47 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 1e-46 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 1e-46 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-46 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-46 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 2e-46 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 5e-46 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 6e-45 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-44 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-44 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 5e-44 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 7e-44 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 8e-44 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 1e-42 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 5e-42 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-41 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 4e-41 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 5e-41 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 6e-41 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-39 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-39 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-39 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 6e-39 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-39 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-38 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 8e-38 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-36 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 2e-36 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-36 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-36 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 5e-36 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 6e-36 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-35 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-35 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 6e-35 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 6e-33 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-28 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 6e-21 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-19 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-19 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-18 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 8e-18 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-17 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 5e-14 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 6e-13 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-12 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 3e-12 |
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 535 | |||
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 0.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 1e-140 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-138 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 1e-134 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-130 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 1e-130 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 1e-130 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 1e-129 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-129 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 1e-129 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 1e-128 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-128 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 1e-127 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 1e-126 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 1e-126 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 1e-125 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 1e-124 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 1e-123 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 1e-123 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-122 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 1e-122 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 1e-121 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 1e-121 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 1e-120 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 1e-119 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 1e-119 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-115 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 1e-110 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-109 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 1e-108 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 1e-108 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 1e-107 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 1e-102 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 1e-102 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 1e-102 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 1e-102 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 2e-98 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 9e-94 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 4e-88 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 2e-80 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 3e-76 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 4e-64 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-62 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 3e-36 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 1e-29 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 |
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 916 bits (2369), Expect = 0.0
Identities = 232/511 (45%), Positives = 326/511 (63%), Gaps = 3/511 (0%)
Query: 26 STDAKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVS 85
+ Q + + I G + S ++ NPAT EV + L ++ + AAV
Sbjct: 12 DLGTENLYFQSMMYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVE 71
Query: 86 AAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEV 145
+AK A P W T R RV +K +L+ ++++LA ++ E GKT+ DA+GD+ RGLEV
Sbjct: 72 SAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEV 131
Query: 146 VEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 205
E G+ LQ E+ GID YS+R+P+G+ AGI PFNFP MIP+WMF A+ CGN
Sbjct: 132 CEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGN 191
Query: 206 TFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNV 265
F+LKPSE+DP I LAEL +EAGLP G+LN+V+G V+AI +I A+SFVGS
Sbjct: 192 AFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTP 251
Query: 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV 325
++Y A+ GKR Q GAKNH I++PDA++D NAL AG+G+AG+RCMA+S V
Sbjct: 252 IARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAV 311
Query: 326 FVGD--SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
VG+ + DKLV ++L++ T+ AD+GPV++K+A++RI LI SGIE GA+L+
Sbjct: 312 PVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLV 371
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
+DGR+ + GYE+G+FIG + DVT DM+ YK EIFGPVL ++A + EEA+ + K++
Sbjct: 372 VDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHE 431
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG 503
YGNG AI+T G AAR F + I G VG+NVPIPVPL + SF G K+S GDLN +G
Sbjct: 432 YGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDS 491
Query: 504 VNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQ 534
+ F+T+ KT+T +W G ++PT +
Sbjct: 492 IKFWTRTKTITSRWPS-GIKDGAEFSIPTMR 521
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 886 bits (2293), Expect = 0.0
Identities = 210/482 (43%), Positives = 309/482 (64%), Gaps = 4/482 (0%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
++ N I G ++ES++ +Y DV+NPAT+EV+ Q+P++T E+ A A +AF +W
Sbjct: 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVA 63
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
+ R R++ Q+L+ + ++LA IT E GK K+A G+V RG+E VE + G +L MG
Sbjct: 64 VPRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMG 123
Query: 159 EYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
+ + +++ ++ + R P+GV GI PFNFP M+P WMFP+A+ GNTF+LKPSE+ P
Sbjct: 124 DSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 219 SIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+ L EL +AGLP GV N+V+G HD VN I + I+AISFVGS G ++Y + S
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKL 337
KRVQS GAKNH IVL DAN++ T+ + A FG+AG+RCMA + V + + KL
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 338 VERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
E+ +K+ G + LGPVI + K+R I+ G+E GARL+ DGR + G
Sbjct: 304 QEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRE---NVSDDG 360
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
F+GPTI +VT +M +K+EIF PVL ++ +L+EAI+I NK+++ NGA +FTS+ A
Sbjct: 361 YFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNA 420
Query: 458 ARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517
R F+ I+AG +GIN+ +P P+ FF F+G K+SF G L+ GK V+FYT+ K VT ++
Sbjct: 421 IRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480
Query: 518 RD 519
Sbjct: 481 PA 482
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 414 bits (1066), Expect = e-140
Identities = 131/483 (27%), Positives = 216/483 (44%), Gaps = 16/483 (3%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
+LIGG ++E S INP V+++ + + AA AAK+A W TP
Sbjct: 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPA 71
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R ++ + EL+ +++ + E G T A ++ + + S G
Sbjct: 72 AERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGR 131
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG-A 218
P+ + G + R GV I P+NFP + + A+ GN V+KP+ P
Sbjct: 132 ISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTG 191
Query: 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277
++ A + EAG+P GV++ V G + + A + ISF GS G + A
Sbjct: 192 GVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAING 251
Query: 278 G--KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSW 333
G K V +G +VL DA++DA A A F GQ CM+++ V V + +
Sbjct: 252 GPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINR-VIVDAAVHDEF 310
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+K VE K + + +GPVI+ + I+ + GA + ++G
Sbjct: 311 LEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGP------ 364
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
G + P + +DVT+DME +EEIFGP++ ++AD A ++ N + +G AA+++
Sbjct: 365 -IEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSK 423
Query: 454 SGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A +F +I++G V IN P F GSK S G F G + +T + +
Sbjct: 424 DIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDRWI 481
Query: 514 TQQ 516
+
Sbjct: 482 GIK 484
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 410 bits (1055), Expect = e-138
Identities = 141/499 (28%), Positives = 221/499 (44%), Gaps = 34/499 (6%)
Query: 34 KQHNPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFP 92
++ P +I G + + + I NPA ++V + + + A+ +A +AF
Sbjct: 31 EKELGKEYPLIINGERVTT--EDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ 88
Query: 93 SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGM 152
+WRN R +++K +IRR + + + E GK K+A D ++ +E+
Sbjct: 89 TWRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQ 148
Query: 153 ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212
G P+GV I P+NF I + + GNT VLKP+
Sbjct: 149 MIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPA 208
Query: 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIY 271
P + E+ +AGLP GV+N V G+ V + + D I+F GS G+ +Y
Sbjct: 209 STTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLY 268
Query: 272 ARASAKG------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV 325
RA+ KRV MG K+ +V DA++D ++ + FG +GQ+C A S
Sbjct: 269 ERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGS-RA 327
Query: 326 FVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+ +K V AK L V T D +GPVI ++A E+I I+ G + G RL+
Sbjct: 328 VIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLM 386
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G G FI PTI+ D+ + +EEIFGPV+ +A+ + A++I N +
Sbjct: 387 TGGE----GDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTE 442
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVP----IPVPLPF----FSFTGSKASFAGD 495
YG A+ T + A + + E G + N I PF S T SKA
Sbjct: 443 YGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAG---- 498
Query: 496 LNFYGKAGVNFYTQIKTVT 514
G + + Q KTV+
Sbjct: 499 ----GPDYLALHMQAKTVS 513
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 397 bits (1022), Expect = e-134
Identities = 144/483 (29%), Positives = 218/483 (45%), Gaps = 23/483 (4%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
L G ++ESR+ E I + PA+ + +P + EE A+ AK A W+ PI
Sbjct: 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPI 70
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R ++ +L+ + + I E K K A G+V R +++ H+ A GE
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGE 130
Query: 160 YVPNVSNGIDT-----YSLREPLGVCAGICPFNFPAMIPLW-MFPVAVTCGNTFVLKPSE 213
+ + REPLGV I PFN+P + + P A+ GNT V KP+
Sbjct: 131 TLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAP-ALVTGNTVVFKPAT 189
Query: 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYA 272
+ + I + E +AG P+G++ +V G + + + + I I+F G G I
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249
Query: 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS-- 330
+A V +G K+ IVL DA++ T + + + F +GQRC A+ VFV DS
Sbjct: 250 KAKM--IPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIK-RVFVQDSVA 306
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ E + L V + + DAD+ PVI +++ I LI +E+GA LL +
Sbjct: 307 DQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAFIQGLIDDALENGATLLSGNK--- 362
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GN + PT+L DVT M EE FGPVL ++ EAI + N++ YG A+I
Sbjct: 363 ----RQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASI 418
Query: 451 FTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
FT A +E G V IN F F G K S G K + T+
Sbjct: 419 FTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQG--IKPSLLSMTRE 476
Query: 511 KTV 513
+
Sbjct: 477 RVT 479
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 389 bits (1001), Expect = e-130
Identities = 138/488 (28%), Positives = 234/488 (47%), Gaps = 15/488 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITT 101
I G ++ES + D+INP QEV+ + T E+ + A+ AA++AF W T
Sbjct: 36 YIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAET 95
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R + + + + I+ + LA T + GKTL+++ D+ V + G+A GE +
Sbjct: 96 RGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMI 155
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ ++ ++EP+GV I P+N+P + W A+ G + V+KPSE P +I
Sbjct: 156 DSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIR 215
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
+ EL E G P G +N++ G V + + + +SF G G HI A+
Sbjct: 216 VFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAANNVTN 275
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLV 338
+ +G KN I+ DA+ + ++ G+ AGQ C A S + V +S +E L+
Sbjct: 276 IALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSR-ILVQNSIKDKFEQALI 334
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
+R K +K+ G +AD ++GPVIS + + +I + GA + + G+ + G
Sbjct: 335 DRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGL 394
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F PT++T+ M +EE+FGPV+ ++ +EAI++ N + YG A+F+ A
Sbjct: 395 FFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKA 454
Query: 459 RKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTVTQ 515
++ +++ G V IN P P + G K S G +L GK G+ Y K +
Sbjct: 455 QRVANKLKLGTVWINDFHPYFAQAP---WGGYKQSGIGREL---GKEGLEEYLVSKHILT 508
Query: 516 QWRDLPGG 523
Sbjct: 509 NTNPQLVN 516
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 388 bits (999), Expect = e-130
Identities = 155/479 (32%), Positives = 242/479 (50%), Gaps = 14/479 (2%)
Query: 43 NLIGGAFIESRSSEYID-VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITT 101
N GG I+S+ + V PAT V+ Q+ EE AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R RVML+ +IR D +A GKT+ +A+ D+ + +E+ G+A G+++
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHI 141
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ G Y+ REPLGVCAGI +N+P MI W A+ CGN V KPS P ++
Sbjct: 142 Q-LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
LAE+ EAG+P G++N+V G +T + +C N+ +SF GS G + ++ K V
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVE 339
+G K+ ++ D ++ + A F GQ C T VFV + +++V+
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTN-GTRVFVQREIMPQFLEEVVK 319
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV--PGYEHG 397
R KA+ V + +G +ISK +++ + + GAR+L G + P ++G
Sbjct: 320 RTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNG 379
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
F+ P +L + DM C KEEIFGPV+ + D+ EE ++ N +G + +FT +
Sbjct: 380 YFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISR 439
Query: 458 ARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
A + +EAG IN PV +P F G K S G N G+A V++Y+Q+KTV
Sbjct: 440 AHRVAANLEAGTCYINTYSISPVEVP---FGGYKMSGFGREN--GQATVDYYSQLKTVI 493
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 387 bits (996), Expect = e-130
Identities = 144/484 (29%), Positives = 228/484 (47%), Gaps = 25/484 (5%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
+ N + G + S I + PA+ + +P + EE ++AK+A P+WR
Sbjct: 4 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 61
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R + K+ +++ RD +K+ ++ E K K A +V R E++ ++ GE
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121
Query: 160 YVPNVSNGIDT-----YSLREPLGVCAGICPFNFPAMIPLW-MFPVAVTCGNTFVLKPSE 213
+ S + REP+G+ I PFN+P + + P A+ GN KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAP-ALIAGNVIAFKPPT 180
Query: 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYA 272
+ + ++LAE EAGLP GV N + G + + I + + I+F GS G I
Sbjct: 181 QGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 240
Query: 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS-- 330
A + + +G K+ IVL DA+++ T + A FG +GQRC A+ V V +S
Sbjct: 241 MAGMR--PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVK-RVLVMESVA 297
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+K+ E+ AL + + DAD+ P+I ++ + + LI + GA L + +
Sbjct: 298 DELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIK--- 353
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GN I P + VT DM EE FGPVL ++ S+EEAI+I NK++YG A+I
Sbjct: 354 ----REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASI 409
Query: 451 FTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
FT+ A ++E G V IN F F G+K S AG K + T +
Sbjct: 410 FTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG--IQGVKYSIEAMTTV 467
Query: 511 KTVT 514
K+V
Sbjct: 468 KSVV 471
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 386 bits (995), Expect = e-129
Identities = 146/484 (30%), Positives = 239/484 (49%), Gaps = 17/484 (3%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
P+ + I G ++E + + I PAT E++++L T + A+++AK+A W
Sbjct: 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAM 71
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQ 156
R R++ + +++R D L+ T + GK +++ D G + E G+A
Sbjct: 72 SPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSA 131
Query: 157 M-GEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215
+ G+Y+P G Y+ R PLGVC GI +N+P I W A+ GN V KPSE
Sbjct: 132 LNGDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENT 189
Query: 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275
P ++ +AE+ +EAGLP G+ N++ G DT + + ++ +S GS G + A A+
Sbjct: 190 PLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAAA 249
Query: 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSW 333
K V +G K+ IV DA++++ + F ++GQ C T VFV +
Sbjct: 250 GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSN-GTRVFVQKKAKARF 308
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+ L R +A+ + + LGP++SK +E++ I+ G GA L+ G
Sbjct: 309 LENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVA 368
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
G ++ PT+ DVT DM +EEIFGPV+ + D +E + N ++G +FT+
Sbjct: 369 -GEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTA 427
Query: 454 SGAAARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQI 510
A A + +EAG + IN PV +P F GSK S G + A + Y+++
Sbjct: 428 DLARAHRVVDGLEAGTLWINTYNLCPVEIP---FGGSKQSGFGREN---SAAALEHYSEL 481
Query: 511 KTVT 514
KTV
Sbjct: 482 KTVY 485
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 386 bits (994), Expect = e-129
Identities = 140/492 (28%), Positives = 219/492 (44%), Gaps = 36/492 (7%)
Query: 42 PNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPIT 100
P IGG ++++ E + +NP+ EVV E +AA+ AA +AF +W++ P
Sbjct: 39 PLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQE 96
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R++LK L+RR +L + E GK +A DV ++ +E+ A
Sbjct: 97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPA 156
Query: 161 VPNVS-NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
V V G D S PLG I P+NFP I M V GNT + KP+E
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKG 278
+ E+ EAG P GV+N + G + V + + IR I+F GS G+ IY A
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 279 ------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS-- 330
KR G KN IV A+ D + + +G GQ+C A S + +
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAAS-RLILTQGAY 335
Query: 331 KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIV 390
+ +++++RA+ L V E + DLGPV+S + + ++ I+ G G +L+L G+ +
Sbjct: 336 EPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLE 393
Query: 391 VPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAI 450
GY FI PT+ T+V +EEIFGPVL ++ EA+++ N YG +
Sbjct: 394 GEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGV 449
Query: 451 FTSSGAAARKFQTEIEAGQVGINVP----IPVPLPF----FSFTGSKASFAGDLNFYGKA 502
++ + E G + N + PF S T +K
Sbjct: 450 YSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTG--------ALD 501
Query: 503 GVNFYTQIKTVT 514
+ + ++K V
Sbjct: 502 YLRLFLEMKAVA 513
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 384 bits (990), Expect = e-129
Identities = 129/455 (28%), Positives = 203/455 (44%), Gaps = 15/455 (3%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G ++ E ++ ++P Q VV + AAV AA++AFP+W P+ R
Sbjct: 8 HYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQR 66
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ + ++ D+LA I E GK L ++ +V + V S + GE
Sbjct: 67 IELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGE-KS 125
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW-MFPVAVTCGNTFVLKPSEKDPGASIM 221
+P GV A P+NFP +P + P A+ GN V KPSE P + +
Sbjct: 126 GPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP-ALLAGNCVVFKPSELTPKVAEL 184
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK-GKR 280
+ ++AGLP GVLN+V G +T A+ + + F GS+ G ++++ + K
Sbjct: 185 TLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE---DKL 337
+ MG N +V A++DA + + + F +AGQRC + + V + +L
Sbjct: 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTC-ARRLLVPQGAWGDALLARL 303
Query: 338 VERAKALKVNAGTEADA-DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V + L+V E A +G VIS A E + + + I GA+ LL +
Sbjct: 304 VAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMT----QPIDG 359
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
+ P IL DV+A E EE FGP+L ++ AI+ N QYG A + + S
Sbjct: 360 AALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRE 418
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKAS 491
+F E AG V N + F G AS
Sbjct: 419 RFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGAS 453
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 383 bits (986), Expect = e-128
Identities = 155/480 (32%), Positives = 248/480 (51%), Gaps = 19/480 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPIT 100
L+ G +++ S ID ++P EVV P + ++ + AV+AA++AF + W
Sbjct: 26 LVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGA 85
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEY 160
R R+M K+ +LI ++LA+ + E GK + A+G++ ++ ++ G A G+
Sbjct: 86 ERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQT 145
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
N+ + LREP+GV I P+NFP +I P A+ G T VLKPSE G SI
Sbjct: 146 HNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSI 205
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGK 279
LAELA EAG+PDGV N+V G D + +D N+ ++F GS G + A+ K
Sbjct: 206 RLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAARTVK 265
Query: 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKL 337
RV +G K IV DA++DA + +A + AGQ C++ S + V + + ++L
Sbjct: 266 RVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSR-LLVQEGIRDALMERL 324
Query: 338 VERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG 397
++ ++ + +G +IS+ E++ + +GI SGA LLL G G E G
Sbjct: 325 LDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGER---IGREAG 381
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
+ PT+ VT DM +EEIFGPVL + + +EA+ + N ++G A++++++
Sbjct: 382 LYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLET 441
Query: 458 ARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTVT 514
A + I AG+ IN + LP G K S G +L G+ G + Y+Q K V
Sbjct: 442 ALQTIRRIRAGRCWINSVIDGTPELP---IGGYKKSGLGREL---GRYGFDEYSQFKGVH 495
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 381 bits (980), Expect = e-127
Identities = 147/494 (29%), Positives = 230/494 (46%), Gaps = 23/494 (4%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF-----PSWRNTP 98
I G + ++ I VINPATQ ++ +P T E+ AV+AAK A W
Sbjct: 11 FINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATAS 70
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
R R + + + +LA + + GK L +A D+ E+ +A
Sbjct: 71 GAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 159 EYVPNVSNGID---TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKD 215
VS +D ++ LREP+GV I P+N+P ++ W A+ G +LKPSE
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELA 190
Query: 216 PGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARA 274
+ L E+ E GLP GVLNI+ G + ++ ++F GS+ G I A
Sbjct: 191 SLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAA 250
Query: 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KS 332
+ K V +G K+ +V D ++D F GQ C A S + + +S
Sbjct: 251 AQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSR-LILHESIATE 309
Query: 333 WEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP 392
+ +++V+ K +K++ E LGPV+S+ E+I + + + GA +L G
Sbjct: 310 FLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGS--RPE 367
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452
+ G FI PTI+TDVT +M+ ++EE+FGPVL + EEAI + N YG GAA+ +
Sbjct: 368 HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVIS 427
Query: 453 SSGAAARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQ 509
+ + +AG V +N P P + G K S G +L G+ G++ Y
Sbjct: 428 NDLERCERVTKAFKAGIVWVNCSQPCFTQAP---WGGVKRSGFGREL---GEWGLDNYLS 481
Query: 510 IKTVTQQWRDLPGG 523
+K VTQ + P G
Sbjct: 482 VKQVTQYISEEPWG 495
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 378 bits (973), Expect = e-126
Identities = 148/488 (30%), Positives = 230/488 (47%), Gaps = 17/488 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPS--WRNTPITT 101
IGG + + +S+ I+V PAT E V ++P+ + AAV+AA+ AF + W +TP
Sbjct: 12 FIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHE 71
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEY 160
R V+ +++ D + E G+ + + + + G A
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTE 131
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI 220
S G + REP+GV I +N P + + A+ G T VLKP+ + P +
Sbjct: 132 TRTGSYG-QSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTAN 190
Query: 221 MLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAE+ E GLP+GVL++V G +T A+ + +I +F GS+ G + RA+ K
Sbjct: 191 ALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEMLKP 250
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLV 338
+G K+ I+L D ++ A + + +G AGQ C+ + + S+ E +
Sbjct: 251 CTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTR-ILAPRSRYDEIVAAVT 309
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN 398
AL V ++ A +GP+IS++ + R+ I GIE GARL+ G G ++G
Sbjct: 310 NFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGG--RPEGLDNGF 367
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
FI PT+ DV M +EEIFGPVL + D+ E+AI I N + YG +++T+
Sbjct: 368 FIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKG 427
Query: 459 RKFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTVTQQ 516
K +I G GIN P P F G K S G + G GV +TQ K+V
Sbjct: 428 IKISQQIRTGTYGINWYAFDPGSP---FGGYKNSGIGREN---GPEGVEHFTQQKSVLLP 481
Query: 517 WRDLPGGS 524
GS
Sbjct: 482 MGYTVAGS 489
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 377 bits (971), Expect = e-126
Identities = 147/484 (30%), Positives = 232/484 (47%), Gaps = 22/484 (4%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G F+ S S E ++PAT EV+ E A AA +AF W T R
Sbjct: 29 HFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKER 88
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
+R +L++ ELI + D+LA+ + G+ L+ + V R E A M +
Sbjct: 89 KRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTF 148
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
V Y++R P G I P+N P M+ W A+ GNT VLKP+E P + L
Sbjct: 149 PVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKL 208
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AE+ EA LP GV N+V G + A+ + ++ G G + A+ KR+
Sbjct: 209 AEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKRL 268
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVE 339
+G K+ +V DA+++ L+A+ F G+RC A S + V + + + K+VE
Sbjct: 269 SPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSR-LLVEEKIFEDFVGKVVE 327
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGR----NIVVPGYE 395
RA+A++V + + ++GP+I + +R+ +++G GARLL+ G +
Sbjct: 328 RARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLS 387
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
GN++ PT+ M+ +EEIFGPVL+ + EEA++ N +YG A +FT
Sbjct: 388 RGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDL 446
Query: 456 AAARKFQTEIEAGQVGIN----VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQI 510
A + E+EAG V +N +P P F G K S + G ++FYT +
Sbjct: 447 ERAHRLALELEAGMVYLNSHNVRHLPTP-----FGGVKGSGDRREG---GTYALDFYTDL 498
Query: 511 KTVT 514
KT+
Sbjct: 499 KTIA 502
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 374 bits (962), Expect = e-125
Identities = 148/476 (31%), Positives = 223/476 (46%), Gaps = 17/476 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G ++ES S+E I+VINPAT+EV+ ++ + AV AA + +R+T + RQ
Sbjct: 11 YINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ 70
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVP 162
++ K+ + D + IT E G L ++ GL + E
Sbjct: 71 ALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERR 130
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
D ++E +GV I P+NFP A G+ VLKPSE+ P A+++L
Sbjct: 131 G-----DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVIL 185
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AE+ + G+P GV N+V+G V N + + +R +SF GS G I +A+ K+V
Sbjct: 186 AEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDFKKV 245
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSK--SWEDKLVE 339
+G K+ IVL D ++ A GQ C A T V V + ++ +L E
Sbjct: 246 SLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAG-TRVLVPNKIKDAFLAELKE 304
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
+ ++V E +GP+ISK+ +++ I GIE GA L G G E G F
Sbjct: 305 QFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPG-KPEGLEKGYF 363
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
PTI +V M +EEIFGPV+ + + L+EAI+I N +YG +
Sbjct: 364 ARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLH 423
Query: 460 KFQTEIEAGQVGINVPIPVP-LPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
K IEAG V IN P LP F G K S G +G G+ + ++K++
Sbjct: 424 KVARSIEAGTVEINEAGRKPDLP---FGGYKQSGLG--REWGDYGIEEFLEVKSIA 474
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 371 bits (956), Expect = e-124
Identities = 136/480 (28%), Positives = 217/480 (45%), Gaps = 21/480 (4%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LI G + E V NPAT +V+ ++ + E+ AAV AA AF W T R
Sbjct: 26 LLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 84
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYV 161
+LKL ++I + A + GK L A ++ ++V G A G
Sbjct: 85 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 144
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
G + R+PLGV A I P+N+P M+ W A+ GN VLKPSE P ++
Sbjct: 145 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 204
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAELA + P GV+NI+ G TV + + +R +S GS G HI + ++ KR
Sbjct: 205 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 263
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLV 338
+G K IV DA+++A + + G+ AGQ C A + ++ + +KL
Sbjct: 264 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTA-ACRIYAQKGIYDTLVEKLG 322
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGRNIVVPGYEHG 397
LK A + +LGP+ S ER+ + ++ +G +++ G GY
Sbjct: 323 AAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY--- 379
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
+ PT+L D ++E+FGPV+ D+ E+ + N +QYG ++++T
Sbjct: 380 -YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGR 438
Query: 458 ARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTVT 514
A + ++ G +N + +P G K S G D+ G+ YT ++ V
Sbjct: 439 AHRVSARLQYGCTWVNTHFMLVSEMP---HGGQKLSGYGKDM---SLYGLEDYTVVRHVM 492
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 370 bits (953), Expect = e-123
Identities = 134/476 (28%), Positives = 222/476 (46%), Gaps = 14/476 (2%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G + + + + VI+P+T+E + + L + + A++AAK+AF +W+ T R
Sbjct: 29 YINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL 88
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVP 162
+ K+ E+ + +A I+ E G + A G + + +
Sbjct: 89 GFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL 148
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222
N + +GV I P+N+P A+ G T VLKPSE P ++++
Sbjct: 149 IEGNE-QAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLF 207
Query: 223 AELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
AE+ EA LP GV N+++G V + + ++ ISF GS AG I AS KRV
Sbjct: 208 AEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNTLKRV 267
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--DKLVE 339
+G K I+ DA++DA + F +GQ C A T + V + + +
Sbjct: 268 CLELGGKGANIIFADADIDALQRGVRHC-FYNSGQSCNAP-TRMLVEQAIYDKAIKTAKD 325
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
A+ +V G + +GPV+SK+ ++I LIQSGI+ GA L+ G + G E G +
Sbjct: 326 IAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG-LPMGMERGYY 384
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
+ PT+ DV M ++EEIFGPVL + ++ +EA+ + N +YG I + + R
Sbjct: 385 VRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCR 444
Query: 460 KFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ ++ +G V +N +P F G K S G G G+ + K ++
Sbjct: 445 RIAAQVRSGMVEVNGHELPGGSY---FGGVKFS--GRAREGGLWGIKEFLDTKAIS 495
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 370 bits (953), Expect = e-123
Identities = 126/493 (25%), Positives = 214/493 (43%), Gaps = 23/493 (4%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SWRNT 97
P P+ + G + S + I+V +P ++++ + EE + + + S R+
Sbjct: 17 PVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDM 74
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
P T R V+ K ++I R++D A + GK A G+V ++ + +
Sbjct: 75 PGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIG 134
Query: 158 GEYVP----NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213
G+Y+P + + REPLGV A I PFN+P + + GN V+KPS
Sbjct: 135 GDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSI 194
Query: 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYAR 273
DP + M + ++AG P + +++ I D + A+SF GS G +
Sbjct: 195 SDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKV 254
Query: 274 ASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--K 331
K+ +G + IVL DA++D + +A + AGQRC A+ V
Sbjct: 255 GGV--KQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKL-VLAERPVYG 311
Query: 332 SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV 391
+++ +R +L+V + D+GP+IS A + + I+ +E G R+L GR
Sbjct: 312 KLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR---- 367
Query: 392 PGYEHGNFIGPTIL---TDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGA 448
++ PT + D DM YK E+F PV L ++ L++AI++ N YG A
Sbjct: 368 --RLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDA 425
Query: 449 AIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508
A+F R+ +E G + IN + ++ F G K S V T
Sbjct: 426 AVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREG--IGYAVEAVT 483
Query: 509 QIKTVTQQWRDLP 521
KT+ ++
Sbjct: 484 AYKTIVFNYKGKG 496
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 366 bits (941), Expect = e-122
Identities = 117/480 (24%), Positives = 216/480 (45%), Gaps = 21/480 (4%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LIG F + ++NP T + L ++ + AAV AA++AF W T R
Sbjct: 28 LLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAER 86
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYV 161
+LK+ + I ++ D+ A GK + + ++ ++ G
Sbjct: 87 SNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAA 146
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
G + R+P+G+ I P+N+P M+ W A+ GNT V KPSE+ P ++
Sbjct: 147 GEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALK 206
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LA L + LP+GV+N++ G +TV NA+ + + +S G G + A A+ KR
Sbjct: 207 LARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAAKTVKR 265
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLV 338
+G K IV DA+++A +N + G+ AGQ C A + ++ + L
Sbjct: 266 THLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTA-ACRIYAEAGIYEKLVADLT 324
Query: 339 ERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGRNIVVPGYEHG 397
++ N + + ++GP+IS++ ++R+ ++ + + GR G+
Sbjct: 325 SAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGF--- 381
Query: 398 NFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAA 457
F PT++ T + E + E+FGPV+ + ++A+ N + YG ++++T +
Sbjct: 382 -FFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISK 440
Query: 458 ARKFQTEIEAGQVGIN--VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTVT 514
A + + ++ G IN + +P G K S G D+ + YT ++ +
Sbjct: 441 AMRAASRLQYGCTWINTHFMLTNEMP---HGGIKQSGYGKDM---SVYALEDYTAVRHIM 494
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 365 bits (940), Expect = e-122
Identities = 144/478 (30%), Positives = 231/478 (48%), Gaps = 26/478 (5%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQ 103
I G +I + E +DVINP + EV+ ++P + EE K A+ A++ +N PIT R
Sbjct: 3 FIDGKWI---NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 104 RVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPN 163
+++ + + I+ ++LA + + GK +K A+ +V R + + + E +P
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIP- 118
Query: 164 VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223
S+ ++ REP+G+ I PFNFP + A+ GN V PS K P I LA
Sbjct: 119 -SDDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 224 ELAMEA----GLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++ A +P GV N++ G + V + I + + ISF GS+ G I +A
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAGF-- 235
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDK 336
K++ +G N IVL DA+++ +NAL F AGQ C+++ + V +S + +
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGM-ILVDESIADKFIEM 294
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
V +AK L V + D+GP+IS + E + ++++ I+ G +LLL G+
Sbjct: 295 FVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGK-------RD 347
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
PTIL +V D K E F PV+ ++ + EE I I N +YG +AIFT+
Sbjct: 348 KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDIN 405
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ KF +E G V IN F G K S G K + + IKT+
Sbjct: 406 KSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREG--VKYAMEEMSNIKTII 461
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 363 bits (935), Expect = e-121
Identities = 127/480 (26%), Positives = 218/480 (45%), Gaps = 17/480 (3%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ I G + S D++NP Q V++ L T ++ + A A++A W + R
Sbjct: 9 SFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDR 68
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG-EYV 161
+ V+ K + + + D + M I E G T+ + ++ + + +++ + G + V
Sbjct: 69 KAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEV 128
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDP-GAS 219
P+ G R PLGV + I PFNFP + + P A+ GN+ V KP +
Sbjct: 129 PSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP-AIALGNSVVHKPDIQTAISGG 187
Query: 220 IMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278
++A+ AGLP GVLN++ + + + + R ISF GS G HI A
Sbjct: 188 TIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRAF 247
Query: 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDK 336
KR+ +G N VL DA++D ++A F GQ CM ++ + V + +K
Sbjct: 248 KRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINR-IIVHQDVYDEFVEK 306
Query: 337 LVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEH 396
R K L T+ +GP+I+++ E+ +I+ G L ++G+
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGK-------RV 359
Query: 397 GNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGA 456
GN + P + + + + E+F P+ ++A S +EAI + N +YG +A+FTS
Sbjct: 360 GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLE 419
Query: 457 AARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516
KF +I++G +N P +F G+KAS G V +T K ++ Q
Sbjct: 420 KGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFG--NPWVVEEFTVTKWISIQ 477
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 364 bits (936), Expect = e-121
Identities = 173/505 (34%), Positives = 246/505 (48%), Gaps = 31/505 (6%)
Query: 26 STDAKLYSKQHNPPRVPN--LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAA 83
S + + N I + S S + V NPAT+E + ++ E+ A
Sbjct: 4 SAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKA 63
Query: 84 VSAAKQAF---PSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDV 139
V AA+QAF WR + R R++ KL +LI RD LA GK +A D+
Sbjct: 64 VKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDL 123
Query: 140 FRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV 199
++ + + G A G +P + TY+ EP+GVC I P+NFP ++ LW
Sbjct: 124 GGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGP 182
Query: 200 AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAI 258
A++CGNT V+KP+E+ P ++ + L EAG P GV+NIV G T AI ++ +
Sbjct: 183 ALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKV 242
Query: 259 SFVGSNVAGMHIYARASAKG--KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQ 316
+F GS G I A+ K KRV +G K+ IV DA++D + F GQ
Sbjct: 243 AFTGSTEVGKLIK-EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ 301
Query: 317 RCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374
C+A S +FV +S + + VERAK + GP I K+ E+I LI+S
Sbjct: 302 CCIAASR-LFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIES 360
Query: 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434
G + GA+L G GY FI PT+ +DVT DM KEEIFGPV M+ SL++
Sbjct: 361 GKKEGAKLECGGGPWGNKGY----FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDD 416
Query: 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN----VPIPVPLPFFSFTGSKA 490
IK N YG A IFT+ A + +++G V +N V P F G K
Sbjct: 417 VIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCP-----FGGFKM 471
Query: 491 SFAG-DLNFYGKAGVNFYTQIKTVT 514
S G +L G+ G + YT++KTVT
Sbjct: 472 SGNGREL---GEYGFHEYTEVKTVT 493
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 361 bits (928), Expect = e-120
Identities = 104/484 (21%), Positives = 205/484 (42%), Gaps = 23/484 (4%)
Query: 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITT 101
+ G++ E I PA E ++++ + +++ V A++A+ W + P
Sbjct: 25 EGVYNGSWGGR--GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPK 82
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R ++ ++ + +R I L ++ E GK L + G+V +++ +++ G++ + G +
Sbjct: 83 RGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPIL 142
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
P+ +G P+G+ I FNFP + W +A+ CGN + K + S+
Sbjct: 143 PSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVA 202
Query: 222 LAELAMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277
+ ++ + LP + ++ G D A+ D + +SF GS G + +
Sbjct: 203 VTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQER 262
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWED 335
R +G N I DA++ + + A G AGQRC +F+ +S +
Sbjct: 263 FGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARR-LFIHESIHDEVVN 321
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+L + ++V + + GP+ +KQA ++ + G ++ G+ + PG
Sbjct: 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGN- 380
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
++ PTI+T + D E F P+L + + EE N+ + G ++IFT
Sbjct: 381 ---YVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDL 437
Query: 456 AAARKFQTE--IEAGQVGINVPIP---VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510
++ + G V +N+P + F G K + G + G Y +
Sbjct: 438 GRIFRWLGPKGSDCGIVNVNIPTSGAEIGGA---FGGEKHTGGGRES--GSDAWKQYMRR 492
Query: 511 KTVT 514
T T
Sbjct: 493 STCT 496
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 359 bits (925), Expect = e-119
Identities = 156/494 (31%), Positives = 238/494 (48%), Gaps = 31/494 (6%)
Query: 37 NPPRVPN--LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--- 91
P N I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF
Sbjct: 14 QPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLG 73
Query: 92 PSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSC 150
WR + R R++ +L +LI RD LA T + GK + D+ L+ + +
Sbjct: 74 SPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYA 133
Query: 151 GMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLK 210
G A G+ +P + +Y+ EP+GVC I P+NFP ++ W A+ GN V+K
Sbjct: 134 GWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 211 PSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMH 269
+E+ P ++ +A L EAG P GV+NIV G T AI ++ ++F GS G
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 270 IYARASAKG--KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFV 327
I A+ KRV +G K+ I++ DA+MD + A F GQ A S FV
Sbjct: 253 I-QVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSR-TFV 310
Query: 328 GDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385
+ + ++ V RAK+ V ++ + GP + + ++I I +G + GA+LL
Sbjct: 311 QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCG 370
Query: 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYG 445
G GY FI PT+ DV M KEEIFGPV+ ++ ++EE + N + YG
Sbjct: 371 GGIAADRGY----FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYG 426
Query: 446 NGAAIFTSSGAAARKFQTEIEAGQVGIN----VPIPVPLPFFSFTGSKASFAG-DLNFYG 500
AA+FT A ++AG V +N P F G K S +G +L G
Sbjct: 427 LAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSP-----FGGYKMSGSGREL---G 478
Query: 501 KAGVNFYTQIKTVT 514
+ G+ YT++KTVT
Sbjct: 479 EYGLQAYTEVKTVT 492
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 359 bits (924), Expect = e-119
Identities = 139/489 (28%), Positives = 235/489 (48%), Gaps = 32/489 (6%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITT 101
IGG F+++ S+ + INP V+ Q+ L + AV+AAK+AF W
Sbjct: 40 FIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARD 99
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEY 160
R R++ +L +++ + ++LA + G A + V ++ + G G
Sbjct: 100 RGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGAT 159
Query: 161 VPNVSNGID---TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
+P + T + +EP+GVC + P+N+P M+ W + GNT V+KP++ P
Sbjct: 160 IPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPL 219
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASA 276
++ AEL ++AG+P GV+NI+ G+ V + D ++R I F GS G HI ++ A
Sbjct: 220 TALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHI-MKSCA 278
Query: 277 KG--KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KS 332
K+V +G K+ I+ D +++ + ++ F G+ C+A +FV +S
Sbjct: 279 LSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGR-LFVEESIHNQ 337
Query: 333 WEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP 392
+ K+VE + +K+ E D + GP + ++ Q G++ GA L+ G + P
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM--QADSLEEAIKIVNKNQYGNGAAI 450
G+ F PT+ TDV M KEE FGP+++ ++ + N ++G + +
Sbjct: 398 GF----FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGV 453
Query: 451 FTSSGAAARKFQTEIEAGQVGIN----VPIPVPLPFFSFTGSKASFAG-DLNFYGKAGVN 505
FT A +++AG V IN + P F G K S G DL G+A +N
Sbjct: 454 FTRDINKALYVSDKLQAGTVFINTYNKTDVAAP-----FGGFKQSGFGKDL---GEAALN 505
Query: 506 FYTQIKTVT 514
Y +IKTVT
Sbjct: 506 EYLRIKTVT 514
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 351 bits (903), Expect = e-115
Identities = 83/517 (16%), Positives = 172/517 (33%), Gaps = 47/517 (9%)
Query: 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
+ N + G +I + I + +P T + ++ + +A A + + R
Sbjct: 5 TELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQM 157
R + + +L++ T G T D+ D+ G+ + + +
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 158 GEYVPNVSNGID---------TYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFV 208
+ + + L GV I FNFP+ A+ G +
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 209 LKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAG 267
+KP+ + + ++AG LP G L+I+ G + + + +SF GS
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG--SSAGLLDQIRSFDVVSFTGSADTA 241
Query: 268 MHIYARASAKGKRVQSNM--GAKNHGIVLPDAN-----MDATLNALAAAGFGAAGQRCMA 320
+ A + + + N+ + N I+ DA D + + +GQ+C A
Sbjct: 242 ATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTA 301
Query: 321 LSTVVFVGDSK--SWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378
+ FV ++ + L + + V +G ++S++ E + I + E
Sbjct: 302 IRR-AFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREE 360
Query: 379 GARLLLDG-RNIVVPGYEHGNFIGPTIL--TDVTADMECYKEEIFGPVLLCM-------- 427
++ + P + D + E+FGPV
Sbjct: 361 AVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDT 420
Query: 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP---------- 477
A A+ + + Q A+I+++ A + E+ ++ P
Sbjct: 421 NALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480
Query: 478 VPLPFFSFTGSKASFAG-DLNFYGKAGVNFYTQIKTV 513
+P G + G +L G + FY + +
Sbjct: 481 NVMPMSLHGGPGRAGGGEELG--GLRALAFYHRRSAI 515
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 147/485 (30%), Positives = 236/485 (48%), Gaps = 26/485 (5%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
+ P I G F+ R +IDV+NPAT+ V+S++P E+ + A+ AA++A P W P
Sbjct: 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPA 65
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE 159
R + K+ IR +++ I E GK + A+ +V + +++ A GE
Sbjct: 66 IERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGE 125
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGA 218
+ + G + + LGV GI P+NFP +I M P A+ GNT V+KPSE P
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP-ALLTGNTIVIKPSEFTPNN 184
Query: 219 SIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277
+I A++ E GLP GV N+V G + + + +S GS AG I A A+
Sbjct: 185 AIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKN 244
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWED 335
+V +G K IV+ DA+++ + A+ + +GQ C + V+V + +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNC-AERVYVQKGIYDQFVN 303
Query: 336 KLVERAKALKV-NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
+L E +A++ N D +GP+I+ A ER+ + + +E GAR+ G+ + GY
Sbjct: 304 RLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY 363
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
+ PT+L DV +M EE FGPVL + D+LE+AI + N + YG ++I+T +
Sbjct: 364 ----YYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQN 419
Query: 455 GAAARKFQTEIEAGQVGINVPIP----VPLPFFSFTGSKASFAG--DLNFYGKAGVNFYT 508
A K ++ G+ IN G + S G D GK G++ Y
Sbjct: 420 LNVAMKAIKGLKFGETYINRENFEAMQGF-----HAGWRKSGIGGAD----GKHGLHEYL 470
Query: 509 QIKTV 513
Q + V
Sbjct: 471 QTQVV 475
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 347 bits (892), Expect = e-109
Identities = 142/499 (28%), Positives = 214/499 (42%), Gaps = 32/499 (6%)
Query: 33 SKQHNPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAF 91
+ P I G + + ++ I +NP EV+ Q+ E A++AAK AF
Sbjct: 524 VRTQLGKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAF 581
Query: 92 PSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCG 151
P+WR+T TR +LK + R+ + +L+ E GK A DV ++ +E+
Sbjct: 582 PAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAR 641
Query: 152 MATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211
+ G + EP GV A I P+NFP I + M A+ GN V KP
Sbjct: 642 EMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKP 701
Query: 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHI 270
S L EL EAGLP+GV N G + + + D +I I+F GS G+ I
Sbjct: 702 SGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRI 761
Query: 271 YARASAKG------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV 324
RA+ K++ S MG KN I+ DA++D + + + FG GQ+C A S V
Sbjct: 762 IERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRV 821
Query: 325 VFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+ + + ++LV AKA KV + +G V +A + I + G G L
Sbjct: 822 IVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLY 881
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
G F+ TI+ + + +EEIFGPVL M+A ++AI+ N Q
Sbjct: 882 ESPVP-----AGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQ 936
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVP----IPVPLPF----FSFTGSKASFAGD 495
+ IF+ S K + E G + IN + PF S G+KA
Sbjct: 937 FALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAG---- 992
Query: 496 LNFYGKAGVNFYTQIKTVT 514
G + + + VT
Sbjct: 993 ----GPDYLLHFMDPRVVT 1007
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 331 bits (850), Expect = e-108
Identities = 121/470 (25%), Positives = 202/470 (42%), Gaps = 35/470 (7%)
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
+NP T E + T+++ A++ A + WR+ +R ++ + ++
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHE 65
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPL 177
D+LA +T E GK L +++ +V + + + + N G + Y L++
Sbjct: 66 DELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLG-NAYYLKQST 124
Query: 178 GVCAGICPFNFPAMIPLWMF-----PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLP 232
GV P+NFP L+ P GN +LK + PG++ + A++ AG P
Sbjct: 125 GVIMACEPWNFP----LYQVIRVFAP-NFIVGNPILLKHAHNVPGSAALTAKIIKRAGAP 179
Query: 233 DGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292
+G L ++ ++D + I D I+ ++ GS G + A K+ +G + I
Sbjct: 180 EGSLINLYPSYDQLADIIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFI 239
Query: 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGT 350
VL DA+ N L A GQ C + S + V S +L LK
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTS-SKRIIVEKSRYDEVLHELKNVFSNLKAGDPL 298
Query: 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTA 410
EAD L P+ S++AKE++ ++ I++GA++ I G F PTILTD+
Sbjct: 299 EADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKG----AFFRPTILTDIAK 354
Query: 411 DMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQV 470
D + +E+FGP+ + AI++ N + YG G+++ S A+K +IE G
Sbjct: 355 DNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMT 414
Query: 471 GINVPI---PVPLPFFSFTGSKASFAGDLNFYG----KAGVNFYTQIKTV 513
IN LP F G K S G YG G+ + V
Sbjct: 415 VINGRWITSGE-LP---FGGIKKS--G----YGRELSGLGLMAFVNEHLV 454
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 329 bits (847), Expect = e-108
Identities = 133/474 (28%), Positives = 223/474 (47%), Gaps = 35/474 (7%)
Query: 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELI 113
++ +NPAT + ++ +P +E + A+S A F W+ T + R + + + + +
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQAL 64
Query: 114 RRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL 173
R +++A IT E GK +K A+ +V + + + + V N
Sbjct: 65 RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQ-QAVIE 123
Query: 174 REPLGVCAGICPFNFPAMIPLWMF-----PVAVTCGNTFVLKPSEKDPGASIMLAELAME 228
PLGV I P+NFP LW P + GN+++LK + G + M+A + E
Sbjct: 124 YRPLGVILAIMPWNFP----LWQVLRGAVP-ILLAGNSYLLKHAPNVTGCAQMIARILAE 178
Query: 229 AGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAK 288
AG P GV V+ ++ V+ + +D I A++ GS AG I A+A A K+ +G
Sbjct: 179 AGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGS 238
Query: 289 NHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKV 346
+ IVL DA+++ + A A + GQ C A + V + +++ D+ V A ALK+
Sbjct: 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAA-AKRFIVEEGIAQAFTDRFVAAAAALKM 297
Query: 347 NAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT 406
+ DLGP+ ++ + + +Q+ + GARLLL G I G N+ T+L
Sbjct: 298 GDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEG----NYYAATVLA 353
Query: 407 DVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE 466
DVT DM +++E+FGPV A A+ + N +++G A IFT+ A + +E
Sbjct: 354 DVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLE 413
Query: 467 AGQVGINVPI---PVPLPFFSFTGSKASFAGDLNFYG----KAGVNFYTQIKTV 513
G V IN + F G K S G +G G++ + ++TV
Sbjct: 414 CGGVFINGYSASDAR-VA---FGGVKKS--G----FGRELSHFGLHEFCNVQTV 457
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 329 bits (847), Expect = e-107
Identities = 149/483 (30%), Positives = 237/483 (49%), Gaps = 23/483 (4%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
N IGG ++ S S+ ID+++P+T +V+ ++P + + A+ A+ A +W TR
Sbjct: 15 NFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTR 74
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
Q ++ IR + LA + EQGK L A+ +V +++ C A G+ +P
Sbjct: 75 QNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILP 134
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMI-----PLWMFPVAVTCGNTFVLKPSEKDP 216
+ + Y + P GV GI +NFP A+ P A+ GNT VLKP+++ P
Sbjct: 135 SDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP------ALITGNTMVLKPTQETP 188
Query: 217 GASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARAS 275
A+ L +A EAGLPDGVLN+++GT V +C+ + I+ GS VAG IY ++
Sbjct: 189 LATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA 248
Query: 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSW 333
V +G K +V+ DA++D F GQ C ++V S +
Sbjct: 249 EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTC-VERLYVHASVYDEF 307
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
K + K LKV +AD+ +GP +++ + I ++ I+ GA + G+ V G
Sbjct: 308 MAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEG 367
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
+E G + PT+L DV D EE FGP+L ++ S+E+AI+ N + YG A + T
Sbjct: 368 FEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQ 427
Query: 454 SGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511
S A + +++E G+V IN + G K S G + GK G+ Y + K
Sbjct: 428 SFANINQAISDLEVGEVYINRGMGEQHQGF---HNGWKQSGFGGED--GKFGLEQYLEKK 482
Query: 512 TVT 514
TV
Sbjct: 483 TVY 485
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 316 bits (812), Expect = e-102
Identities = 148/491 (30%), Positives = 232/491 (47%), Gaps = 43/491 (8%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LI G ++++ + E IDV NPA + + +P +E +AA+ AA +A P+WR R
Sbjct: 12 ALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKER 71
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ L+ D LA +T EQGK L +A+G++ +E G+ +P
Sbjct: 72 ATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIP 131
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMI-----PLWMFPVAVTCGNTFVLKPSEKDP 216
+++P+GV A I P+NFP AMI P A+ G T VLKP+ + P
Sbjct: 132 GHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP------ALAAGCTMVLKPASQTP 185
Query: 217 GASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275
+++ LAELA+ AG+P GV N+V G N + + +R +SF GS G + + +
Sbjct: 186 FSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245
Query: 276 AKGKRVQSNMGAKNHG----IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS- 330
K+V +G G IV DA++D + A+ F AGQ C+ + ++V D
Sbjct: 246 KDIKKVSLELG----GNAPFIVFDDADLDKAVEGALASKFRNAGQTCVC-ANRLYVQDGV 300
Query: 331 -KSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389
+ +KL + L + G + +GP+I ++A ++ I +E GAR++ G+
Sbjct: 301 YDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGK-- 358
Query: 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
GNF PTIL DV A+ + KEE FGP+ + + I N ++G A
Sbjct: 359 --AHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAY 416
Query: 450 IFTSSGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYG----KAG 503
+ + + +E G VGIN I P F G KAS G G K G
Sbjct: 417 FYARDLSRVFRVGEALEYGIVGINTGIISNEVAP---FGGIKAS--G----LGREGSKYG 467
Query: 504 VNFYTQIKTVT 514
+ Y +IK +
Sbjct: 468 IEDYLEIKYMC 478
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 316 bits (813), Expect = e-102
Identities = 147/491 (29%), Positives = 235/491 (47%), Gaps = 37/491 (7%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
L+ G +I++ I V NPA V+ +P + K A+ A+ +A W R
Sbjct: 35 CLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKER 94
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ K +LI + D +A+ +T+EQGK L +A+G+V +E A G+ +P
Sbjct: 95 AGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIP 154
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMI-----PLWMFPVAVTCGNTFVLKPSEKDP 216
NG +R+P+GV A I P+NFP AMI P A+ G T +++P++ P
Sbjct: 155 APQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP------ALAAGCTMIVRPADLTP 208
Query: 217 GASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275
++ L LA +AG+P GVL IV G + + + +R +SF GS G + A+ +
Sbjct: 209 LTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268
Query: 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSW 333
KR+ +G IV DA++DA ++ + + AGQ C+ + ++V +
Sbjct: 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVC-ANRIYVQRGVYDKF 327
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+KL + K LKV GTE +GP+I ++A ++ I+ + GA+L+ G+ +
Sbjct: 328 AEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL---- 383
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
G F P ILT VT+DM KEE FGP+ D+ EE I N +G A +T
Sbjct: 384 --GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTE 441
Query: 454 SGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYG----KAGVNFY 507
+ + A + +E G VG N + P F G K S G G K G+ Y
Sbjct: 442 NFSRAIRVSEALEYGMVGHNTGLISNEVAP---FGGVKQS--G----LGREGSKYGIEEY 492
Query: 508 TQIKTVTQQWR 518
+ K + ++
Sbjct: 493 LETKYICSAYK 503
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = e-102
Identities = 130/486 (26%), Positives = 221/486 (45%), Gaps = 32/486 (6%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
IGG + +S DV NPAT V++++P E+ AAV A + A PI TR
Sbjct: 14 GYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETR 73
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ + +++ ++ + +++ + E GK K+AQG+V ++ + +P
Sbjct: 74 RKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIP 133
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
P+GV I P+NFP MI + A+ G V+KP+ + P I
Sbjct: 134 EKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSA-ALAAGCPSVIKPASETPLTMIA 192
Query: 222 LAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
+ + LPDG++N+V G +C+ ++ +SF GS G + + + K+
Sbjct: 193 FFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKK 252
Query: 281 VQSNMGAKNHG----IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWE 334
+ +G G IV DA+++A + L A F GQ C+ + +FV + ++
Sbjct: 253 LALELG----GNAPFIVFDDADLEAAADNLIANKFRGGGQTCVC-ANRIFVHEKVADAFG 307
Query: 335 DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
KL ER + V G D+GP+I+KQ +++ R +Q ++ GA L+ +
Sbjct: 308 QKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQ---PAEL 364
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
G F PT++ V +M CY+EE FGP++ + EE I N ++G + +FT+
Sbjct: 365 GDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTAD 424
Query: 455 GAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYG----KAGVNFYT 508
A++ + G VG N P F G KAS G G G+ +
Sbjct: 425 AERAQRVAAGLRFGHVGWNTGTGPTPEAP---FGGMKAS--G----IGREGGLEGLFEFV 475
Query: 509 QIKTVT 514
+ +TV
Sbjct: 476 EAQTVP 481
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 315 bits (809), Expect = e-102
Identities = 147/486 (30%), Positives = 235/486 (48%), Gaps = 33/486 (6%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
IGG + + S +V +PAT E + +P E A+ AA+ A+ WR R
Sbjct: 15 AYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKER 74
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ + +L+ + D LA+ +TTEQGK L +A+G++ +E G+ +P
Sbjct: 75 AAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLP 134
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
++EP+GVCA I P+NFP AMI + P A+ G V+KP+E P +++
Sbjct: 135 TPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP-ALAAGCPIVVKPAESTPFSALA 193
Query: 222 LAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
+A LA AG+P GVL++V G I + +R +SF GS G + A+++ K+
Sbjct: 194 MAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKK 253
Query: 281 VQSNMGAKNHG----IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDS--KSWE 334
+ +G G IV DA++DA + A+ + GQ C+ + FV + ++
Sbjct: 254 LTLELG----GNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVC-TNRFFVHERVYDAFA 308
Query: 335 DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394
DKL LKV GTE+ A LGP+I++ A +++ I + GA L+ G+ +
Sbjct: 309 DKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALG-- 366
Query: 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454
F PT+LT V DM+ KEE FGP+ + S EE +++ N ++G A +++
Sbjct: 367 --HGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRD 424
Query: 455 GAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYG----KAGVNFYT 508
+ +E G VGIN + P F G K S G G G++ Y
Sbjct: 425 IGRVWRVAEALEYGMVGINTGLISNEVAP---FGGVKQS--G----LGREGSHYGIDDYV 475
Query: 509 QIKTVT 514
IK +
Sbjct: 476 VIKYLC 481
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 305 bits (784), Expect = 2e-98
Identities = 147/495 (29%), Positives = 229/495 (46%), Gaps = 49/495 (9%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
+ +GG ++ + ++ V +PA+ + + E +AAV AA +AF WR R
Sbjct: 15 SFVGGRWLPAAAT--FPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 72
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP 162
++ K L+ ++ D LA IT E GK LK+A G++ +E A G+ +
Sbjct: 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 132
Query: 163 NVSNGIDTYSLREPLGVCAGICPFNFP-AMI-----PLWMFPVAVTCGNTFVLKPSEKDP 216
+ L++P+GV A I P+NFP AMI A+ G T V+KP+E P
Sbjct: 133 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGA------ALAAGCTVVVKPAEDTP 186
Query: 217 GASIMLAELAMEAGLPDGVLNIVHGTHDTVNAI----CDDANIRAISFVGSNVAGMHIYA 272
+++ LAELA +AG+P GV N++ + + C D + ISF GS G +
Sbjct: 187 FSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLH 246
Query: 273 RASAKGKRVQSNMGAKNHG----IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVG 328
A+ KRV +G G IV AN+D + A+ F GQ C+ S V
Sbjct: 247 HAANSVKRVSMELG----GLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVC-SNQFLVQ 301
Query: 329 DS--KSWEDKLVER-AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385
++ E K L+V G E GP+I+++A E++ + + + GA ++
Sbjct: 302 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 361
Query: 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYG 445
G+ + NF PT+L +VT DM C EE FGP+ ++ D+ EEAI I N G
Sbjct: 362 GKRHQLG----KNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVG 417
Query: 446 NGAAIFTSSGAAARKFQTEIEAGQVGINVPIP--VPLPFFSFTGSKASFAGDLNFYG--- 500
++ A + ++E G VG+N + V P F G K S G G
Sbjct: 418 LAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECP---FGGVKQS--G----LGREG 468
Query: 501 -KAGVNFYTQIKTVT 514
K G++ Y ++K V
Sbjct: 469 SKYGIDEYLELKYVC 483
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 294 bits (754), Expect = 9e-94
Identities = 90/504 (17%), Positives = 165/504 (32%), Gaps = 48/504 (9%)
Query: 50 IESRSSEYIDVINPATQEVV-SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLK 108
+ ++ N T E + P+ T E A +AA + +R + R ++
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 109 LQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLE--------VVEHSCGMATLQMGEY 160
+ + D + E G++ R V S A L
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 161 VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPV--AVTCGNTFVLKPSEKDPGA 218
D + LG A NFP A+ G ++K PG
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 219 SIMLAELAMEA----GLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYAR 273
S ++AE +A LP + ++ G + A+ I+A+ F GS G ++
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 274 ASAKGKRVQSN--MGAKNHGIVLPDANMDATLNA--LAAAGFGAAGQRCMALSTVVFVGD 329
A + + + +GA N + P A A A+ GQ C VVF +
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTK-PGVVFALN 299
Query: 330 SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389
+ +E A++L L P I + ++ G + G +
Sbjct: 300 TPE-TQAFIETAQSLI--RQQSPSTLLTPGIRDSYQSQVVSR---GSDDGIDVTFSQAE- 352
Query: 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA 449
P F+ ++ ++EEIFGP L + +++ + + + A
Sbjct: 353 -SPCVASALFVTS---SENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408
Query: 450 IFTSSG--AAARKFQTEIE--AGQVGIN-VPIPVPLPFFS-----FTGSKASFAGDLNFY 499
I + + +E AG++ N P V + + + S S + +
Sbjct: 409 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSV--- 465
Query: 500 GKAGVNFYTQIKTVTQQWRD--LP 521
G ++ + + Q + LP
Sbjct: 466 GAEAIHRWLRPVAY-QALPESLLP 488
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 290 bits (745), Expect = 4e-88
Identities = 116/491 (23%), Positives = 188/491 (38%), Gaps = 32/491 (6%)
Query: 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTP 98
P N G F + + + A + + T ++ AAV+AA+ F W TP
Sbjct: 511 PERRNSRGVEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTP 570
Query: 99 ITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG 158
R + + L+ + E GKTL DA ++ + + G
Sbjct: 571 AGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFG 630
Query: 159 EYVPNVS-NGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPG 217
G GV I P+NFP I L A+ GN+ V KP+E+ P
Sbjct: 631 SETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPR 690
Query: 218 ASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277
+ L EAG+P L +V G A+ +I + F GS I +AK
Sbjct: 691 IAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAK 750
Query: 278 G---KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSW 333
+ + G N I A + + + + F +AGQRC AL + D +
Sbjct: 751 DGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRM 810
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+ + A+ LK+ ++ +GPVI +AK+R+ I ++ ARL G
Sbjct: 811 IEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARM-KTEARLHFAG------P 863
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM--QADSLEEAIKIVNKNQYGNGAAIF 451
G F+ P I A EE+FGP+L + + ++LE ++ + + YG +
Sbjct: 864 APEGCFVAPHIFELTEAGQ--LTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVH 921
Query: 452 TSSGAAARKFQTEIEAGQVGINVPI--PVPL--PF----FSFTGSKASFAGDLNFYGKAG 503
+ + ++ G + +N + V PF S TG KA G
Sbjct: 922 SRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAG--------GPHY 973
Query: 504 VNFYTQIKTVT 514
+ + +TVT
Sbjct: 974 LARFATEQTVT 984
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 259 bits (664), Expect = 2e-80
Identities = 81/468 (17%), Positives = 150/468 (32%), Gaps = 53/468 (11%)
Query: 39 PRVPNLIGGAFIESRSS-EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNT 97
P+ +L+ G +++ + PA V T E A AA++AF ++ +
Sbjct: 28 PKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVG-----TVELVNRACEAAEEAFWTYGYS 82
Query: 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGL--------EVVEHS 149
R + + + I + + + E G G+ R + +
Sbjct: 83 SRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGD 142
Query: 150 CGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL--WMFPVAVTCGNTF 207
+ + + ++ P+G A NFP A+ G
Sbjct: 143 YLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPV 202
Query: 208 VLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGTHDTV-NAICDDANIRAISFVG 262
V+K PG ++AE A G+ GV +++ G V +A+ +I+A+ F G
Sbjct: 203 VVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTG 262
Query: 263 SNVAGMHIYARASA--KGKRVQSNMGAKNHGIVLPDANMD---ATLNALAAAGFGAAGQR 317
S G ++ +A + +G+ N +LP+A A + AGQ
Sbjct: 263 SLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQF 322
Query: 318 CMALSTVVFVGDSKSWE---DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374
C + V + + VE + +
Sbjct: 323 CTN-PGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFAT------- 374
Query: 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADM---ECYKEEIFGPVLLCMQADS 431
+ ++ G P + A EE+FGP+ L ++ S
Sbjct: 375 ---------RNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGS 425
Query: 432 LEEAIKIVNKNQYGNGAAIFTSSG----AAARKFQTEIEAGQVGINVP 475
E ++ Q A I +G A + E +AG+V +N
Sbjct: 426 PAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGF 473
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 249 bits (639), Expect = 3e-76
Identities = 109/466 (23%), Positives = 182/466 (39%), Gaps = 31/466 (6%)
Query: 29 AKLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAA 87
L + +P ++G + +S+ ++P V++ A+ AA
Sbjct: 52 KALKDLKGQTEAIPCVVGDEEV--WTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAA 109
Query: 88 KQAFPSWRNTPITTRQRVMLKLQELIRRD-IDKLAMNITTEQGKTLKDAQGDVFRGLEVV 146
A W P+ R +V LK +++ ++ QGKT+ A+ D E++
Sbjct: 110 LAARKEWDLKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAA--ELI 167
Query: 147 ---EHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTC 203
+ A GE +V + R G A I PFNF A I +
Sbjct: 168 DFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTA-IGGNLAGAPALM 226
Query: 204 GNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVG 262
GN + KPS+ AS + + EAGLP ++ V T + + ++ I+F G
Sbjct: 227 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286
Query: 263 SNVAGMHIYARASAKG------KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQ 316
S H++ + + R+ G KN V A++D+ ++ + F GQ
Sbjct: 287 SVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQ 346
Query: 317 RCMALSTVVFVGDSKSWE---DKLVERAKALKV-NAGTEADADLGPVISKQAKERICRLI 372
+C A S ++V S W +L+E +KV + + VI +A RI + +
Sbjct: 347 KCSACS-RLYVPKSL-WPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWL 404
Query: 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM--QAD 430
+ S + +L G G ++ P I+ KEEIFGPVL D
Sbjct: 405 EHARSSPSLSILAGGQ---CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDD 461
Query: 431 SLEEAIKIVNK-NQYGNGAAIFTSSGAAARKFQTEIE--AGQVGIN 473
E +K+V+ YG A+F A ++ + AG IN
Sbjct: 462 KYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN 507
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 4e-64
Identities = 64/417 (15%), Positives = 141/417 (33%), Gaps = 32/417 (7%)
Query: 73 PLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL 132
P+T E A ++ K+A + ++ + LA E G +
Sbjct: 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGI 61
Query: 133 KDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMI 192
+ + ++ G + + + T ++ EP+G+ GI P P
Sbjct: 62 VEDKVIKNHFASEFIYNKYKDEQTCG--ILEEDDNLGTMTIAEPVGIICGIVPTTNPTST 119
Query: 193 PLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHG-THDTVN 247
++ +++ N + P + ++ A+L ++A G P ++ + + + N
Sbjct: 120 AIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSN 179
Query: 248 AICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALA 307
A+ +I I G Y + GK ++ A++ + ++
Sbjct: 180 ALMKHDDIALILATGGPGMVKAAY----SSGKPAIGVGAGNVPVVIDETADIKRAVASVL 235
Query: 308 AAGFGAAGQRCMALSTVVFVGDS--KSWEDKLVERAKALKVNAGTEADADLGPVISKQAK 365
+ G C + V V D +++ + + +I
Sbjct: 236 MSKTFDNGVVCASEQA-VIVVDEVYDEVKERFASHKAHVLSKTDADKVRK-VLLIDGALN 293
Query: 366 ERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLL 425
+I + I A + VP + L V+ D + E P L
Sbjct: 294 AKIVGQPATAIAEMAG-------VKVP--ADTKVLIGEGLGKVSYDD-AFAHEKLSPTLG 343
Query: 426 CMQADSLEEAI----KIVNKNQYGNGAAIFTSSGAA---ARKFQTEIEAGQVGINVP 475
+AD+ E+A+ +V G+ + ++T+ R F +++ ++ IN+P
Sbjct: 344 MFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP 400
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 211 bits (539), Expect = 1e-62
Identities = 67/420 (15%), Positives = 137/420 (32%), Gaps = 43/420 (10%)
Query: 74 LTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133
L + +E + + +A +A ++ + + +KLA E G +
Sbjct: 8 LRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIW 67
Query: 134 DAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193
+ +H + N + PLGV AG+ P P
Sbjct: 68 QDKVIKNVF--ASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTV 125
Query: 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAEL----AMEAGLPDGVLNIVHG-THDTVNA 248
++ +++ GN+ V P A + + A +AG P G ++ + T +
Sbjct: 126 IYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQ 185
Query: 249 ICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAA 308
+ + I G + A + G + AN+ + +
Sbjct: 186 LMKHKDTAVILATGGSAMV----KAAYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILD 241
Query: 309 AGFGAAGQRCMALSTVV--------FVGDSKSWEDKLVERAKALKV-NAGTEADADLGPV 359
+ G C + +VV + + + + A+A+++ + + P
Sbjct: 242 SKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPA 301
Query: 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEI 419
I ++ + I L + + AR+L I T V A + Y E
Sbjct: 302 IVGKSVQHIANLAGLTVPADARVL----------------IAEE--TKVGAKIP-YSREK 342
Query: 420 FGPVLLCMQADSLEEAIKIVNKNQYGNG----AAIFTSSGAAARKFQTEIEAGQVGINVP 475
P+L A++ +EA ++ Y G I + R+F + ++ +N P
Sbjct: 343 LAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP 402
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 139 bits (354), Expect = 3e-36
Identities = 120/461 (26%), Positives = 189/461 (40%), Gaps = 83/461 (18%)
Query: 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKD 134
+ + AV A+ AF S R P+ R + + LQ LI+ +L + + K +
Sbjct: 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWN 74
Query: 135 AQ-GDVFRGLEVVEHSCGMATLQMGEY-------VPNVSNGIDTYSLREPLGVCAGICPF 186
A +V V ++ E+ + + Y EPLGV I +
Sbjct: 75 AYYEEVV----YVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTW 130
Query: 187 NFPAMIPLWMFPV--AVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHD 244
N+P L + P+ A+ GN VLKPSE + +LA + + L + +++G
Sbjct: 131 NYPFN--LTIQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQYLDKDLYPVINGGVP 187
Query: 245 TVNAICD---DANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-------GAKNHGIVL 294
+ D I + GS G I A+AK ++ G K+ V
Sbjct: 188 ETTELLKERFDH----ILYTGSTGVGKII-MTAAAK------HLTPVTLELGGKSPCYVD 236
Query: 295 PDANMDATLNALAAAGFGAAGQRCMALSTV--VFVGDSKSWEDKLVERAK-ALKVNAGTE 351
+ ++D +A F +GQ C+A + S ++++VE+ K +LK G +
Sbjct: 237 KNCDLDVACRRIAWGKFMNSGQTCVA---PDYILC--DPSIQNQIVEKLKKSLKEFYGED 291
Query: 352 ADA--DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY--EHGNFIGPTILTD 407
A D G +IS + +R+ LI+ + G +I PTILTD
Sbjct: 292 AKKSRDYGRIISARHFQRVMGLIEGQ------------KVAYGGTGDAATRYIAPTILTD 339
Query: 408 VTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ-----YGNGAAIFTSSGAAARKFQ 462
V +EEIFGPVL + SLEEAI+ +N+ + Y +F+S+ +K
Sbjct: 340 VDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALY-----MFSSNDKVIKKMI 394
Query: 463 TEIEAGQVGIN---VPIPVP-LPF----FSFTGS---KASF 492
E +G V N V I + LPF S GS K SF
Sbjct: 395 AETSSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSF 435
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-29
Identities = 92/442 (20%), Positives = 177/442 (40%), Gaps = 69/442 (15%)
Query: 62 NPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121
+ + + + + + SA K F + + R++ + +L+E + + + L
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 122 MNITTEQGKTLKDAQ-GDVFRGLEVVEHSC--------------GMATLQMGEYVPNVSN 166
+ + GK ++ L ++ + YV
Sbjct: 72 SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYV----- 126
Query: 167 GIDTYSLREPLGVCAGICPFNFP---AMIPLWMFPV-AVTCGNTFVLKPSEKDPGASIML 222
++EP GV I PFN+P + PL + A+ GNT ++KPSE P S ++
Sbjct: 127 ------VQEPYGVTYIIGPFNYPVNLTLTPL----IGAIIGGNTCIIKPSETTPETSAVI 176
Query: 223 AELAMEAGLPDGVLNIVHGTHDTVNAICD---DANIRAISFVGSNVAGMHIYARASAKGK 279
++ + + ++ G D + + D I F GS G + +A+AK
Sbjct: 177 EKI-IAEAFAPEYVAVIQGGRDENSHLLSLPFDF----IFFTGSPNVGKVV-MQAAAK-- 228
Query: 280 RVQSNM-------GAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKS 332
++ G K IVLPDA++D T+N L F +GQ +A + S
Sbjct: 229 ----HLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYV---HYS 281
Query: 333 WEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP 392
+D L+ER +V G +++++ +R+ L++ + ++L+ +
Sbjct: 282 VKDALLERLVE-RVKTELPEINSTGKLVTERQVQRLVSLLE---ATQGQVLVGSQAD--- 334
Query: 393 GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAA-IF 451
+ T++ V + EE+FGP+L ++ DS+ AI VNK+ A +F
Sbjct: 335 --VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVF 392
Query: 452 TSSGAAARKFQTEIEAGQVGIN 473
A+ +I++G +N
Sbjct: 393 GKDMDVAKGIINQIQSGDAQVN 414
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 7e-08
Identities = 71/491 (14%), Positives = 128/491 (26%), Gaps = 198/491 (40%)
Query: 8 IQRVRNL----KAVRPQIFAKFSTDAK------LYSKQHNPPRVPNLIGGAFIESRSSEY 57
+ L + + ++ KF + L S R P+++ +IE R Y
Sbjct: 61 VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 58 IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117
D Q F N R + LKL++ +
Sbjct: 121 NDN----------------------------QVFAK-YNVS---RLQPYLKLRQALLE-- 146
Query: 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA-----TLQMGEYVPNVSNGIDTYS 172
L+ A+ V+ G+ + + +Y
Sbjct: 147 --------------LRPAKN-------VLID--GVLGSGKTWV--------ALDVCLSYK 175
Query: 173 LREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASI-MLAEL-----A 226
++ C +F W+ N P + ML +L
Sbjct: 176 VQ---------CKMDFKI---FWL-----NLKN-------CNSPETVLEMLQKLLYQIDP 211
Query: 227 MEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG 286
D NI H + +R+ +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAEL-----------------------------RRLLKSKP 242
Query: 287 AKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALST-----VV-FVGDSKSWEDKLVER 340
+N +VL + NA F C L T V F+ + + L
Sbjct: 243 YENCLLVLLNVQNAKAWNA-----FNL---SCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 341 AKALKVNAGTEADA-------------DLGPVISKQAKERICRLIQSGIESGARLLLDGR 387
+ L T + DL P ++ R + S I A + DG
Sbjct: 295 SMTL-----TPDEVKSLLLKYLDCRPQDL-P---REVLTTNPRRL-SII---AESIRDGL 341
Query: 388 NIVVPGYEHGNF--IGPTILTDV----TADM-ECYKE-EIFGP-------VLLCM--QAD 430
++H N + I + + A+ + + +F P +LL +
Sbjct: 342 AT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF-PPSAHIPTILLSLIWFDV 399
Query: 431 SLEEAIKIVNK 441
+ + +VNK
Sbjct: 400 IKSDVMVVVNK 410
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.83 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.04 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-111 Score=898.34 Aligned_cols=479 Identities=31% Similarity=0.508 Sum_probs=451.4
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+++.++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|++++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 83 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERN 83 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34567899999999888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||+.+++. |+..+++.++|++++.+.+.++..+ ...+...+++|+|+|||++|+|||||+++++++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 84 DELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP-LRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE-EETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc-ccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999986 6999999999999988887766655 345667888999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHH-HH
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYA-RA 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~a 274 (535)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++ .+
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999994 678999999999999999999999998876 55
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|.|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 6779999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++|||+++.+++++.++|++++++|+++++||.........+|+|++|||+.++++||++++||+||||++|++|+|+|
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence 99999999999999999999999999999999987654444579999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++||++||+.|+|
T Consensus 403 eAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PFGG~k~SG~G--re~G~~gl~~ft~~K~v 479 (490)
T 2wme_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGE-SPAEMPVGGYKQSGVG--RENGLTTLAHYTRIKSV 479 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSC-CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCC-CCCCCCcccccccccC--chhHHHHHHHhhceeEE
Confidence 99999999999999999999999999999999999999998653 3478999999999999 57999999999999999
Q ss_pred EeccCCC
Q 009407 514 TQQWRDL 520 (535)
Q Consensus 514 ~~~~~~~ 520 (535)
++++.|.
T Consensus 480 ~i~~g~~ 486 (490)
T 2wme_A 480 QVELGDY 486 (490)
T ss_dssp EEECSCC
T ss_pred EEECCCC
Confidence 9987543
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-107 Score=874.79 Aligned_cols=494 Identities=47% Similarity=0.817 Sum_probs=456.1
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
|..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNM 103 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45568999999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..+++.|+..+++.+++++...+++.++..+....+...++.++|+|||++|+|||||++++++++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 183 (521)
T 4e4g_A 104 NELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMF 183 (521)
T ss_dssp HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999988887766544322345678899999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 184 a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 263 (521)
T 4e4g_A 184 APAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263 (521)
T ss_dssp HHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 264 lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~ 343 (521)
T 4e4g_A 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKAD 343 (521)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCS
T ss_pred CCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCc
Confidence 9999999999999999999999999999999999999999999999988887 69999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||.....+....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (521)
T 4e4g_A 344 MGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEA 423 (521)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999997532222247999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||+++.+..+.+||||+|.||+|+.+++|++|+++||+.|+|+.
T Consensus 424 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~ 503 (521)
T 4e4g_A 424 LSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITS 503 (521)
T ss_dssp HHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEE
Confidence 99999999999999999999999999999999999999987555578999999999999766899999999999999999
Q ss_pred ccCCCCCCCCcCCCCCC
Q 009407 516 QWRDLPGGSGVSLAMPT 532 (535)
Q Consensus 516 ~~~~~~~~~~~~~~~~~ 532 (535)
+|.+... .+..+.+|+
T Consensus 504 ~~~~~~~-~~~~~~~~~ 519 (521)
T 4e4g_A 504 RWPSGIK-DGAEFSIPT 519 (521)
T ss_dssp CCCCCSC-C--------
T ss_pred ecCcccc-ccccccccc
Confidence 8865521 223456654
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-106 Score=860.53 Aligned_cols=468 Identities=30% Similarity=0.479 Sum_probs=444.3
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 13 ~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 92 (484)
T 3ifg_A 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDDL 92 (484)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++...+...+...+....+...+++++|+|||++|+|||||+.+.++++++|
T Consensus 93 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~A 172 (484)
T 3ifg_A 93 ALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPA 172 (484)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHHH
Confidence 99999999999999999999999999999988776665554423346678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|++||+|++|+||||+.+|+.|++.+++++|
T Consensus 173 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~~~k 252 (484)
T 3ifg_A 173 LAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVK 252 (484)
T ss_dssp HHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGGGTC
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999995 5789999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 253 ~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 332 (484)
T 3ifg_A 253 KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGP 332 (484)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988888 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
|+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 333 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 408 (484)
T 3ifg_A 333 LINEAAVKKVESHIADALAKGASLMTGGKRHA----LGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRL 408 (484)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999997532 36999999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 409 aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--r~~g~~gl~~~~~~k~v~~ 482 (484)
T 3ifg_A 409 ANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLI-SNEVAPFGGVKQSGLG--REGSHYGIDDYVVIKYLCV 482 (484)
T ss_dssp HHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCEETTEEC--CBSTTTTTGGGEEEEEEEE
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcCcCC--CCchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999998643 3578999999999999 5799999999999999875
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-105 Score=863.51 Aligned_cols=477 Identities=28% Similarity=0.465 Sum_probs=449.6
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhc--hhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHh
Confidence 34578999999987778899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.+++++...+...++..+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 190 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999998877766555442224667889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 191 ~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa 270 (520)
T 3ed6_A 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270 (520)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5688999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 271 ~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~ 350 (520)
T 3ed6_A 271 NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADT 350 (520)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTC
T ss_pred hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999988877 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||..........|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 351 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 430 (520)
T 3ed6_A 351 EMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQE 430 (520)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999999764221224699999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 431 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G--re~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 431 AIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPY-FAQAPWGGYKQSGIG--RELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCC-CCCCCcCCcCcCcCC--ccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999998654 578999999999999 579999999999999999
Q ss_pred eccC
Q 009407 515 QQWR 518 (535)
Q Consensus 515 ~~~~ 518 (535)
.++.
T Consensus 508 ~~~~ 511 (520)
T 3ed6_A 508 TNTN 511 (520)
T ss_dssp EESS
T ss_pred EcCC
Confidence 8764
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-105 Score=858.05 Aligned_cols=472 Identities=27% Similarity=0.450 Sum_probs=446.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENRE 89 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeee-ccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLR-EPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+...++..+ ...+...++.+ +|+|||++|+|||||++++++++
T Consensus 90 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 168 (506)
T 3rh9_A 90 EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIP-EKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKL 168 (506)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECS-CCGGGCEEEEEEEECCSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cCCCceeeEeecccceEEEEECCCchHHHHHHHHH
Confidence 99999999999999999999999999999999888777665544 22456678888 99999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+++++|+.||+||+|+||||+.+|+.|++.+++
T Consensus 169 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~ 248 (506)
T 3rh9_A 169 SAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE 248 (506)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999994 5788999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 249 ~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 328 (506)
T 3rh9_A 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGID 328 (506)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCS
T ss_pred cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||...+. ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 329 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (506)
T 3rh9_A 329 IGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAEL---GDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEV 405 (506)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGC---CSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC---CCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHH
Confidence 999999999999999999999999999999975321 26999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 406 i~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 406 IDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGP-TPEAPFGGMKASGIG--REGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHTTTEEEEEEEE
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC-CCCCCccCcCcCcCC--cCccHHHHHHhcceEEEEE
Confidence 9999999999999999999999999999999999999998654 468999999999999 6899999999999999987
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 54
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-105 Score=859.42 Aligned_cols=468 Identities=30% Similarity=0.493 Sum_probs=444.6
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 33 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 112 (504)
T 3ek1_A 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDI 112 (504)
T ss_dssp SSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 36799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++.+.+...+...+....+...++.++|+|||++|+|||||+++.++++++|
T Consensus 113 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~A 192 (504)
T 3ek1_A 113 ALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPA 192 (504)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988876655544433345678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 193 LaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~lk 272 (504)
T 3ek1_A 193 LAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIK 272 (504)
T ss_dssp HHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhhcC
Confidence 999999999999999999999999999999999999999984 5789999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 273 ~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 352 (504)
T 3ek1_A 273 RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGP 352 (504)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCC
T ss_pred CeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCcccc
Confidence 99999999999999999999999999999999999999999999988877 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 353 li~~~~~~~v~~~i~~a~~~Ga~v~~gG~~------~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 426 (504)
T 3ek1_A 353 MIEEKAITKVKAHIEDAVSKGAKLITGGKE------LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQ 426 (504)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEECCCE------EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcc------CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999974 25899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|||++||||+|.++++++++++++|+|+||++. ...+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~-~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL-ISNEVAPFGGVKQSGLG--REGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSC-CCCSSSCBCCSGGGEES--CBSTTTSGGGGEEEEEEEEEC
T ss_pred HhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC-CCCCCCCcCCcCcCcCC--CCCcHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999875 34578999999999999 579999999999999998764
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-105 Score=856.52 Aligned_cols=477 Identities=30% Similarity=0.457 Sum_probs=446.9
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 90 (497)
T 3k2w_A 11 KNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKH 90 (497)
T ss_dssp CTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred cccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
+|++++++|+|||..+++.|+..+++.+++++...+...++..+....+...++.++|+|||++|+|||||+.+.+++++
T Consensus 91 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 170 (497)
T 3k2w_A 91 ILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIG 170 (497)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999887776655444233566788999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~ 250 (497)
T 3k2w_A 171 PALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEY 250 (497)
T ss_dssp HHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999 567899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++
T Consensus 251 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~ 330 (497)
T 3k2w_A 251 MTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQM 330 (497)
T ss_dssp TCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||........+.|+|+.|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 331 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 410 (497)
T 3k2w_A 331 GPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAI 410 (497)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHH
T ss_pred ccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHH
Confidence 99999999999999999999999999999973111112368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||+++.. .+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 411 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~k~SG~G--~~~G~~gl~~ft~~k~v~~~ 487 (497)
T 3k2w_A 411 EFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE-QHQGFHNGWKQSGFG--GEDGKFGLEQYLEKKTVYIN 487 (497)
T ss_dssp HHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC-CTTSCBCCEETSEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcCCCcCC--ccchHHHHHHhcceEEEEEE
Confidence 999999999999999999999999999999999999998654 478999999999999 58999999999999999987
Q ss_pred cC
Q 009407 517 WR 518 (535)
Q Consensus 517 ~~ 518 (535)
+.
T Consensus 488 ~~ 489 (497)
T 3k2w_A 488 EA 489 (497)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-105 Score=856.44 Aligned_cols=471 Identities=24% Similarity=0.415 Sum_probs=445.5
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
|...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEA 101 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 455678999999987666 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..++ +.|+..+++.++++++..+.+.++..+....+...++.++|+|||++|+|||||+.+.+++
T Consensus 102 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (498)
T 4f3x_A 102 DEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWK 181 (498)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999 8899999999999998877666554432234667889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+++++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 260 (498)
T 4f3x_A 182 LAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260 (498)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 99999999999 5578999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 261 ~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~ 340 (498)
T 4f3x_A 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTEN 340 (498)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGC
T ss_pred hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccC
Confidence 999999999999999999999999999999999999999999999999988888 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCC-EEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGA-RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
++||++++.+++++.++|++++++|+ ++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 416 (498)
T 4f3x_A 341 EIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS----DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKD 416 (498)
T ss_dssp SSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCC----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTS
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCC----CCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHH
Confidence 99999999999999999999999999 9999997532 479999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.... +.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 417 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~-~~~PfGG~k~SG~G--r~~G~~~l~~~t~~k~v 493 (498)
T 4f3x_A 417 DAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLT-NEMPHGGIKQSGYG--KDMSVYALEDYTAVRHI 493 (498)
T ss_dssp CHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCC-TTSCBCCSGGGEEC--CBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCC-CCCCcCCcCcCCcC--ccchHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999986543 78999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
++++
T Consensus 494 ~~~~ 497 (498)
T 4f3x_A 494 MINH 497 (498)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8754
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-104 Score=853.73 Aligned_cols=469 Identities=28% Similarity=0.469 Sum_probs=441.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 579999999875567899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCC---CCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNV---SNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|++++++|+|||..+++ .|+..+++.++++++..+...++..+.. ..+...++.++|+|||++|+|||||+.++++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 99999999999999998 8999999999999988777665544421 2233578899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+++++|+.||+|++|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999994 57889999999999999999999999999999
Q ss_pred h-cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 275 S-AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 275 ~-~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|+
T Consensus 278 a~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~ 357 (517)
T 2o2p_A 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLER 357 (517)
T ss_dssp HHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTST
T ss_pred HHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9 899999999999999999999999999999999999999999999999988877 89999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC-
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS- 431 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~- 431 (535)
++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 358 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 433 (517)
T 2o2p_A 358 DTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVP----RPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADG 433 (517)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTT
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCC----CCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCC
Confidence 99999999999999999999999999999999997532 3689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 432 -LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 432 -~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.
T Consensus 434 ~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 434 DVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNK-TDVAAPFGGFKQSGFG--KDLGEAALNEYLRI 510 (517)
T ss_dssp CSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCCGGGEEC--CBSHHHHHHTTEEE
T ss_pred CHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCC-CCCCCCcCCcCcCCcC--ccChHHHHHHhCCc
Confidence 9999999999999999999999999999999999999999998753 3478999999999999 57999999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+.+|
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9998754
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-104 Score=853.33 Aligned_cols=474 Identities=32% Similarity=0.496 Sum_probs=448.6
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhc--hhccCCCHHHHHHHHHHHHHHHHh
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAF--PSWRNTPITTRQRVMLKLQELIRR 115 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~--~~w~~~~~~~R~~~L~~~a~~l~~ 115 (535)
..+++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 356799999999887788999999999 99999999999999999999999999 889999999999999999999999
Q ss_pred cHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 116 DIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 116 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
++++|++++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999889999999999999888776655544222466788999999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 668899999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 261 a~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 340 (528)
T 3u4j_A 261 ARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNER 340 (528)
T ss_dssp HTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTT
T ss_pred HhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 341 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~---~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 417 (528)
T 3u4j_A 341 TKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGR---EAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTAD 417 (528)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECT---TTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC---CCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 99999999999999999999999999999999976421 169999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 418 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 494 (528)
T 3u4j_A 418 EAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDG-TPELPIGGYKKSGLG--RELGRYGFDEYSQFKGV 494 (528)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCC-CTTSCBCCSGGGEES--CBSTTHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCC-CCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999998643 578999999999999 57899999999999999
Q ss_pred EeccC
Q 009407 514 TQQWR 518 (535)
Q Consensus 514 ~~~~~ 518 (535)
+.++.
T Consensus 495 ~~~~~ 499 (528)
T 3u4j_A 495 HVTLG 499 (528)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88753
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-103 Score=848.43 Aligned_cols=476 Identities=30% Similarity=0.459 Sum_probs=446.5
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-----hccCCCHHHHHHHHHHHHHH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-----SWRNTPITTRQRVMLKLQEL 112 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-----~w~~~~~~~R~~~L~~~a~~ 112 (535)
++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 3456789999999887788999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccc-c--CCCCCceeeeeeccCceEEeecCCCcc
Q 009407 113 IRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV-P--NVSNGIDTYSLREPLGVCAGICPFNFP 189 (535)
Q Consensus 113 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~GVv~~I~p~N~P 189 (535)
|++++++|++++++|+|||..+++.|+..+++.+++++...+.+.++.. + ....+...++.++|+|||++|+|||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999999999999999999988766544321 1 112456788999999999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGM 268 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~ 268 (535)
+++.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999995 57889999999999999999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccccc
Q 009407 269 HIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVN 347 (535)
Q Consensus 269 ~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG 347 (535)
.|++.++.+++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|
T Consensus 245 ~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 324 (503)
T 3iwj_A 245 KIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKIS 324 (503)
T ss_dssp HHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBS
T ss_pred HHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999999999999999999999999988888 899999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEe
Q 009407 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM 427 (535)
Q Consensus 348 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~ 427 (535)
+|+|+++++||++++.+++++.++|++++++|+++++||...+ ....|+|++|||+.+++++|++++||+||||++|+
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~--~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 325 DPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE--HLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCT--TCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCc--cCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 9999999999999999999999999999999999999997532 12469999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 428 ~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++|
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~g~~~f 479 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQP-CFTQAPWGGVKRSGFG--RELGEWGLDNY 479 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTT
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCC-CCCCCCcCCcCcccCC--CcchHHHHHHh
Confidence 99999999999999999999999999999999999999999999998753 3578999999999999 57999999999
Q ss_pred hheeEEEeccC
Q 009407 508 TQIKTVTQQWR 518 (535)
Q Consensus 508 t~~k~v~~~~~ 518 (535)
|+.|+|+.++.
T Consensus 480 ~~~k~v~~~~~ 490 (503)
T 3iwj_A 480 LSVKQVTQYIS 490 (503)
T ss_dssp EEEEEEEEECC
T ss_pred hCeEEEEEeCC
Confidence 99999988754
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-104 Score=849.13 Aligned_cols=478 Identities=31% Similarity=0.502 Sum_probs=446.1
Q ss_pred CCCCCceecCeeeeCCCCCe-EEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEY-IDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence 34567899999998766678 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
+++|++++++|+|||..+++.|+..+++.++++++..+...++..+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 999999999999999999999999999999999988776655444322 3446788999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|++++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~ 255 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAK 255 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999944888999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 256 ~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 335 (503)
T 1a4s_A 256 TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETR 335 (503)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC--CCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY--EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~--~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+||++++.+++++.++|++++++|+++++||+....... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 336 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (503)
T 1a4s_A 336 MGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEE 415 (503)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHH
Confidence 999999999999999999999999999999975310100 258999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~k~v 492 (503)
T 1a4s_A 416 EVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI-SPVEVPFGGYKMSGFG--RENGQATVDYYSQLKTV 492 (503)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEE
T ss_pred HHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcCceEE
Confidence 99999999999999999999999999999999999999998764 3578999999999999 67999999999999999
Q ss_pred EeccCC
Q 009407 514 TQQWRD 519 (535)
Q Consensus 514 ~~~~~~ 519 (535)
+.++.+
T Consensus 493 ~~~~~~ 498 (503)
T 1a4s_A 493 IVEMGD 498 (503)
T ss_dssp EECCSC
T ss_pred EEccCC
Confidence 887644
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-104 Score=847.58 Aligned_cols=478 Identities=44% Similarity=0.778 Sum_probs=447.3
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999998766788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..+++.|+..+++.+++++.+.++..++..+....+...+++++|+|||++|+|||||+.++++++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999999999999999999999887777766544322235567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~ 242 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEN 242 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcce-EEEeCChhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALST-VVFVGDSKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~-vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++| ||+++++|+|+++|+++++++++|+|.++++++
T Consensus 243 ~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~~d~f~~~l~~~~~~~~vG~~~~~~~~~ 322 (486)
T 1t90_A 243 LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKLQEKVADIKIGNGLDDGVFL 322 (486)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCB
T ss_pred CCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCCHHHHHHHHHHHHHhcccCCCCccCCcc
Confidence 9999999999999999999999999999999999999999999999 765555899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||.... .+.|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 323 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~---~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai 399 (486)
T 1t90_A 323 GPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV---SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAI 399 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSC---CSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCC---CCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHH
Confidence 9999999999999999999999999999996421 1368999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||++.....+.+||||+|.||+|..+++|++|+++||+.|+|+.+
T Consensus 400 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~ 479 (486)
T 1t90_A 400 EIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTAR 479 (486)
T ss_dssp HHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999998755445789999999999996568999999999999999887
Q ss_pred cC
Q 009407 517 WR 518 (535)
Q Consensus 517 ~~ 518 (535)
+.
T Consensus 480 ~~ 481 (486)
T 1t90_A 480 YP 481 (486)
T ss_dssp CC
T ss_pred cC
Confidence 63
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-104 Score=850.22 Aligned_cols=466 Identities=30% Similarity=0.448 Sum_probs=440.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 12 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 91 (505)
T 3prl_A 12 ANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKEII 91 (505)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCC-C----CceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVS-N----GIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
++++++|+|||..+++.|+..+++.++++++......++..+... . +...++.++|+|||++|+|||||+++.++
T Consensus 92 a~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 171 (505)
T 3prl_A 92 GELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAA 171 (505)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999887766554433211 2 45678899999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
++++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 172 ~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 251 (505)
T 3prl_A 172 KIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKA 251 (505)
T ss_dssp HHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999 467899999999999999999999999999998
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|. ++
T Consensus 252 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~-~~ 328 (505)
T 3prl_A 252 K--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE-DD 328 (505)
T ss_dssp C--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-TT
T ss_pred c--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-Cc
Confidence 7 8999999999999999999999999999999999999999999999988877 899999999999999999999 99
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~-------~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~d 401 (505)
T 3prl_A 329 ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR-------QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDAN 401 (505)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred CcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHH
Confidence 99999999999999999999999999999999962 58999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 402 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~G--r~~g~~~~~~f~~~k~v 479 (505)
T 3prl_A 402 EAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLG--VQGIKPSLLSMTRERVT 479 (505)
T ss_dssp HHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEES--CBSHHHHHHHTEEEEEE
T ss_pred HHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCC--cCccHHHHHHhhceEEE
Confidence 9999999999999999999999999999999999999999986545678999999999999 68999999999999999
Q ss_pred EeccC
Q 009407 514 TQQWR 518 (535)
Q Consensus 514 ~~~~~ 518 (535)
++++.
T Consensus 480 ~~~~~ 484 (505)
T 3prl_A 480 VLNLA 484 (505)
T ss_dssp EEEC-
T ss_pred EEeCC
Confidence 88764
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-104 Score=853.72 Aligned_cols=471 Identities=29% Similarity=0.485 Sum_probs=444.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999988778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHH----hcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATL----QMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+|++++++|+|||..++ |+..+++.+++++...+. +.++..+ ...+. .++.++|+|||++|+|||||+++++
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~-~~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIP-LGGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEE-CSSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCcccc-cCCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999999 999999999999988776 6666554 23455 8899999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999878999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 275 SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 275 ~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
+++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 328 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcC
Confidence 9999999999999999999999999999999999999999999999999988888 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++|| .........|+|+.|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 407 (517)
T 3r31_A 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDED 407 (517)
T ss_dssp CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHH
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHH
Confidence 999999999999999999999999999999999 3111112469999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|
T Consensus 408 eAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v 484 (517)
T 3r31_A 408 EVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNL-CPVEIPFGGSKQSGFG--RENSAAALEHYSELKTV 484 (517)
T ss_dssp HHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCC-CCTTSCBCCEETTEEC--CBSTGGGGGGSEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCC-CCCCCCcCCcCcCCCC--cCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999754 3578999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.++
T Consensus 485 ~~~~ 488 (517)
T 3r31_A 485 YVST 488 (517)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8765
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-103 Score=842.98 Aligned_cols=469 Identities=30% Similarity=0.482 Sum_probs=444.9
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL 120 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 120 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 10 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 89 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDL 89 (481)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999998877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhh
Q 009407 121 AMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA 200 (535)
Q Consensus 121 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~A 200 (535)
++++++|+|||..+++.|+..+++.+++++.......+...+....+...+++++|+|||++|+|||||+++.++++++|
T Consensus 90 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 169 (481)
T 3jz4_A 90 ARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPA 169 (481)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999988766555544433346678899999999999999999999999999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCC
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGK 279 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~ 279 (535)
|++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.++++++
T Consensus 170 LaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~~ 249 (481)
T 3jz4_A 170 LAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK 249 (481)
T ss_dssp HHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTTC
T ss_pred HHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999 56889999999999999999999999999999999999
Q ss_pred eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCC
Q 009407 280 RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGP 358 (535)
Q Consensus 280 ~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gp 358 (535)
|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||
T Consensus 250 ~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gp 329 (481)
T 3jz4_A 250 KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGP 329 (481)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCC
T ss_pred ceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCcccc
Confidence 99999999999999999999999999999999999999999999988888 89999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHH
Q 009407 359 VISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438 (535)
Q Consensus 359 li~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~ 438 (535)
++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 330 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 405 (481)
T 3jz4_A 330 LIDEKAVAKVEEHIADALEKGARVVCGGKAHE----RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQ 405 (481)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCT----TCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC----CCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997532 35899999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 439 ~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|++.
T Consensus 406 aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 406 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII-SNEVAPFGGIKASGLG--REGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC-CCSSSCBCCSGGGEES--CBSHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC-CCCCCCcCCcccCcCC--CCchHHHHHHhhceeEEEEe
Confidence 999999999999999999999999999999999999764 3578999999999999 68999999999999999864
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-103 Score=845.39 Aligned_cols=473 Identities=30% Similarity=0.436 Sum_probs=445.0
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch--hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP--SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 10 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (495)
T 3b4w_A 10 KLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKDL 89 (495)
T ss_dssp SEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|++++++|+|||..+++ .|+..+++.++++++..+.+.++..+ ...+...++.++|+|||++|+|||||+++++++++
T Consensus 90 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 168 (495)
T 3b4w_A 90 FTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETR-TGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIA 168 (495)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEE-EETTEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-CCCCceEEEEEccCceEEEECCCcchHHHHHHHHH
Confidence 99999999999999998 89999999999999887776665443 22344678899999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.+++++
T Consensus 169 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~l 248 (495)
T 3b4w_A 169 PALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAEML 248 (495)
T ss_dssp HHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999997788999999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|
T Consensus 249 ~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 328 (495)
T 3b4w_A 249 KPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIG 328 (495)
T ss_dssp CCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBC
T ss_pred CceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccC
Confidence 999999999999999999999999999999999999999999999988888 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++++++|+++++||+.... ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 329 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~--~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 329 PLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEG--LDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTT--CTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEecCccccc--ccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 9999999999999999999999999999975321 12589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|+++|||++||||+|.++++++++++++|+|+||++. ..+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~--~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA--FDPGSPFGGYKNSGIG--RENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC--CCTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC--CCCCCCCCCCCCCCcC--ccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999875 4578999999999999 589999999999999998876
Q ss_pred CCCC
Q 009407 518 RDLP 521 (535)
Q Consensus 518 ~~~~ 521 (535)
.+..
T Consensus 483 ~~~~ 486 (495)
T 3b4w_A 483 GYTV 486 (495)
T ss_dssp TCCC
T ss_pred Cccc
Confidence 4433
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-103 Score=842.49 Aligned_cols=469 Identities=35% Similarity=0.506 Sum_probs=442.2
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4679999999876678899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..++. .|+..+++.++++++..+...++..+ ...+...++.++|+|||++|+|||||+++.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeee-ccCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 69999999999999887766655444 234556788999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 6678999999999999999999999999999999
Q ss_pred -cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCC
Q 009407 276 -AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEAD 353 (535)
Q Consensus 276 -~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~ 353 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 999999999999999999999999999999999999999999999999988887 899999999999999999999999
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHH
Q 009407 354 ADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLE 433 (535)
Q Consensus 354 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ 433 (535)
+++||++++.+++++.++|++++++|+++++||+..+ ..|+|++|||+.++++||++++||+||||++|++|+|+|
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 415 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG----NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLD 415 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHH
Confidence 9999999999999999999999999999999987532 358999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 434 EAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 434 eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++|++.|+|
T Consensus 416 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~pfGG~k~SG~G--~~~G~~~l~~f~~~K~v 492 (501)
T 1bxs_A 416 DVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVV-SAQCPFGGFKMSGNG--RELGEYGFHEYTEVKTV 492 (501)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCC-CTTSCBCCSGGGEES--CBSHHHHHHTTEEEEEE
T ss_pred HHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCC-CCCCCCCCcCcCCcC--ccchHHHHHHhhCeeEE
Confidence 999999999999999999999999999999999999999987543 478999999999999 57999999999999999
Q ss_pred Eecc
Q 009407 514 TQQW 517 (535)
Q Consensus 514 ~~~~ 517 (535)
+.++
T Consensus 493 ~~~~ 496 (501)
T 1bxs_A 493 TIKI 496 (501)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8865
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-103 Score=841.66 Aligned_cols=471 Identities=30% Similarity=0.451 Sum_probs=443.3
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERAS 84 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
+|++++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+.+++++++
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 164 (479)
T 2imp_A 85 EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMA 164 (479)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHH
Confidence 99999999999999999999999999999999877665555433222345678999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 165 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 244 (479)
T 2imp_A 165 PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKN 244 (479)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999995 46899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC-CCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE-ADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~-~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.| ++++
T Consensus 245 ~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 324 (479)
T 2imp_A 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIA 324 (479)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCS
T ss_pred CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCc
Confidence 9999999999999999999999999999999999999999999999988888 8999999999999999999999 9999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+|||+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 325 MGPLINAAALERVEQKVARAVEEGARVAFGGKAVE----GKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCC----SSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999997522 25899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~~~~k~v~~ 477 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE-AMQGFHAGWRKSGIG--GADGKHGLHEYLQTQVVYL 477 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCC-CTTSCBCCEETTEES--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCC-CCCCCCCCCCCCCCC--CCchHHHHHHhcCeeEEEe
Confidence 9999999999999999999999999999999999999997644 578999999999999 6899999999999999876
Q ss_pred c
Q 009407 516 Q 516 (535)
Q Consensus 516 ~ 516 (535)
+
T Consensus 478 ~ 478 (479)
T 2imp_A 478 Q 478 (479)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-103 Score=841.61 Aligned_cols=467 Identities=28% Similarity=0.408 Sum_probs=435.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeee-eccCceEEeecCCCcchhhHhhhh
Q 009407 120 LAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSL-REPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
|+++++.|+|||..+++ .|+..+++.+++++............ ..+...++. ++|+|||++|+|||||+++.++++
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKV 182 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 89999999999988765543222111 124446777 999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhc
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASA 276 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~ 276 (535)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~ 262 (497)
T 3i44_A 183 IPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN 262 (497)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999 55889999999999999999999999999999999
Q ss_pred CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCC
Q 009407 277 KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADAD 355 (535)
Q Consensus 277 ~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~ 355 (535)
++||+++|||||||+||++||| |.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|++++
T Consensus 263 ~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~ 341 (497)
T 3i44_A 263 TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNH 341 (497)
T ss_dssp TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSC
T ss_pred cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCc
Confidence 9999999999999999999999 999999999999999999999999988888 89999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+||++++.+++++.++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 342 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~-~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 420 (497)
T 3i44_A 342 IGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLP-MGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEA 420 (497)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCC-CcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHH
Confidence 99999999999999999999999999999994221 11236999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|+++|+++|||++||||+|.++++++++++++|+|+||. ....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 421 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~--~~~~~~~PfGG~k~SG~G--r~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 421 VTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG--HELPGGSYFGGVKFSGRA--REGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT--CCCCTTCCBCCSGGGCCC--CBSHHHHHHTTEEEEEES
T ss_pred HHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC--CCCCCCCCcCCcCcCcCC--ccchHHHHHHhcceeEEE
Confidence 999999999999999999999999999999999999994 234578999999999999 679999999999999875
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-103 Score=844.19 Aligned_cols=472 Identities=31% Similarity=0.481 Sum_probs=443.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 107 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELA 107 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987667889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.++++++..+...++.++....+...++.++|+|||++|+|||||+.+.++++++||
T Consensus 108 ~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 187 (515)
T 2d4e_A 108 VMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPAL 187 (515)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHHH
Confidence 99999999999999999999999999999887776665444223455678899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCe
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~ 280 (535)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++++++|
T Consensus 188 aaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~~ 267 (515)
T 2d4e_A 188 AFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLKR 267 (515)
T ss_dssp HTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTCE
T ss_pred HcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999994 57899999999999999999999999999999999999
Q ss_pred EEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCC
Q 009407 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPV 359 (535)
Q Consensus 281 v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpl 359 (535)
+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++||+
T Consensus 268 v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 347 (515)
T 2d4e_A 268 LSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPL 347 (515)
T ss_dssp EEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCC
T ss_pred eEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCC
Confidence 9999999999999999999999999999999999999999999988877 899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCEEEeccccccC----CCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 360 ISKQAKERICRLIQSGIESGARLLLDGRNIVV----PGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 360 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~----~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
+++.+++++.++|++++++|+++++||..... .....|+|++|||+.+ +++|++++||+||||++|++|+|+|||
T Consensus 348 i~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~deA 426 (515)
T 2d4e_A 348 IHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEA 426 (515)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHHH
Confidence 99999999999999999999999999975310 0112589999999999 999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+.
T Consensus 427 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~~~~~K~v~~ 503 (515)
T 2d4e_A 427 LRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNV-RHLPTPFGGVKGSGDR--REGGTYALDFYTDLKTIAL 503 (515)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCC-CCTTSCBCCSGGGBCS--CBSHHHHHHHHEEEEEEEE
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhCceeEEEE
Confidence 999999999999999999999999999999999999998754 4578999999999999 5799999999999999988
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
++
T Consensus 504 ~~ 505 (515)
T 2d4e_A 504 PL 505 (515)
T ss_dssp ES
T ss_pred cC
Confidence 76
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-103 Score=841.75 Aligned_cols=472 Identities=28% Similarity=0.434 Sum_probs=440.7
Q ss_pred cCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHH
Q 009407 35 QHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIR 114 (535)
Q Consensus 35 ~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 114 (535)
.......++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+
T Consensus 18 ~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~ 96 (495)
T 1wnd_A 18 KAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIE 96 (495)
T ss_dssp ----CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHH
Confidence 34444567899999998655 78999999999999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhH
Q 009407 115 RDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193 (535)
Q Consensus 115 ~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 193 (535)
+++++|++++++|+|||..+++. |+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||+++.
T Consensus 97 ~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 176 (495)
T 1wnd_A 97 ENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMA 176 (495)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHH
Confidence 99999999999999999999988 99999999999998776665554432213446788999999999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++
T Consensus 177 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 255 (495)
T 1wnd_A 177 AWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIIS 255 (495)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999 5678999999999999999999999999999
Q ss_pred HHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 273 ~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
.++++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 256 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~ 335 (495)
T 1wnd_A 256 HTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDD 335 (495)
T ss_dssp HHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTS
T ss_pred HHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCcc
Confidence 999999999999999999999999999999999999999999999999999988888 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcC-CEEEeccc-cccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESG-ARLLLDGR-NIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
+++++|||+++.+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|
T Consensus 336 ~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 410 (495)
T 1wnd_A 336 ESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPF 410 (495)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-----CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEe
Confidence 9999999999999999999999999999 99999986 42 25899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchh
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQ 509 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~ 509 (535)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+
T Consensus 411 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~f~~ 487 (495)
T 1wnd_A 411 DNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM-LVSEMPHGGQKLSGYG--KDMSLYGLEDYTV 487 (495)
T ss_dssp CCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEE
T ss_pred CCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCC-CCCCCCCCCCCcCcCC--ccchHHHHHHhhC
Confidence 999999999999999999999999999999999999999999998754 3478999999999999 5799999999999
Q ss_pred eeEEEec
Q 009407 510 IKTVTQQ 516 (535)
Q Consensus 510 ~k~v~~~ 516 (535)
.|+|+.+
T Consensus 488 ~k~v~~~ 494 (495)
T 1wnd_A 488 VRHVMVK 494 (495)
T ss_dssp EEEEEEE
T ss_pred eEEEEec
Confidence 9999764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-103 Score=848.12 Aligned_cols=471 Identities=30% Similarity=0.462 Sum_probs=444.7
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
..+++||||+|+. ++++++++||+| |+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3457899999997 568999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhh-HHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGM-ATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..+++.|+..+++.+++++.. .++..++..+ ...+...++.++|+|||++|+|||||+++.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEIL-SRPGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCC-CCTTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeec-ccCCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999988 6777776655 234677889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999999
Q ss_pred cC------CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 276 AK------GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 276 ~~------~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
.+ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+
T Consensus 273 ~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 352 (538)
T 3qan_A 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGD 352 (538)
T ss_dssp SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSC
T ss_pred hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCC
Confidence 88 9999999999999999999999999999999999999999999999988888 8999999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.|+++++||++++.+++++.++|++++++| ++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 353 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 427 (538)
T 3qan_A 353 PTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDS----STGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427 (538)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCC----CCCceeCCeeeecCCCCChhhCCCcCCcEEEEEE
Confidence 9999999999999999999999999999999 9999997632 2699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEc-CCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN-~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|| .++....+.+||||+|.||+|. +++|++|+++|
T Consensus 428 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~G~~gl~~f 506 (538)
T 3qan_A 428 ANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDS-KAGGPDYLALH 506 (538)
T ss_dssp ESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCC-CBTSTTTGGGG
T ss_pred eCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCc-ccccHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4544446889999999999993 47899999999
Q ss_pred hheeEEEeccC
Q 009407 508 TQIKTVTQQWR 518 (535)
Q Consensus 508 t~~k~v~~~~~ 518 (535)
|+.|+|+.++.
T Consensus 507 t~~k~v~~~~~ 517 (538)
T 3qan_A 507 MQAKTVSEMYA 517 (538)
T ss_dssp EEEEEEEEEC-
T ss_pred hCeEEEEEecC
Confidence 99999988763
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-103 Score=842.46 Aligned_cols=468 Identities=32% Similarity=0.472 Sum_probs=441.2
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876678899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..++. .|+..+++.++++++..+...++..+ ...+...++.++|+|||++|+|||||+++.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCccee-cCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999874 69999999999999877666554444 2334567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|.++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999 6678999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 999999999999999999999999999999999999999999999999988887 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.++++||++++||+||||++|++|+|+||
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 415 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAA----DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEE 415 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCC----SSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCC----CCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHH
Confidence 999999999999999999999999999999997531 2589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++|++.|+|+
T Consensus 416 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~-~~~~~PfGG~k~SG~G--~~~G~~gl~~f~~~K~v~ 492 (500)
T 1o04_A 416 VVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV-FGAQSPFGGYKMSGSG--RELGEYGLQAYTEVKTVT 492 (500)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC-CCTTSCBCCSGGGEES--CBSTGGGGGGGEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCC-CCCCCCCCCcCCCCCC--ccchHHHHHHhcceEEEE
Confidence 9999999999999999999999999999999999999998754 3478999999999999 579999999999999998
Q ss_pred ecc
Q 009407 515 QQW 517 (535)
Q Consensus 515 ~~~ 517 (535)
.++
T Consensus 493 ~~~ 495 (500)
T 1o04_A 493 VKV 495 (500)
T ss_dssp EEC
T ss_pred Eec
Confidence 765
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-102 Score=839.54 Aligned_cols=480 Identities=21% Similarity=0.359 Sum_probs=445.9
Q ss_pred ccccccCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHH
Q 009407 30 KLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKL 109 (535)
Q Consensus 30 ~~~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 109 (535)
..|+..+-+..++.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++
T Consensus 13 ~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 90 (500)
T 2j6l_A 13 AWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQI 90 (500)
T ss_dssp GGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 3555566667788999999994 46789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcc
Q 009407 110 QELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFP 189 (535)
Q Consensus 110 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P 189 (535)
++.|++++++|+++++.|+|||..++..|+..+++.++++++..+.+.++..+....+...++.++|+|||++|+|||||
T Consensus 91 a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 170 (500)
T 2j6l_A 91 GDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFP 170 (500)
T ss_dssp HHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSST
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcch
Confidence 99999999999999999999999999899999999999998877666555444222344567889999999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH----HcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM----EAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNV 265 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~ 265 (535)
+.++++++++||++||+||+|||+.+|.++..+++++. ++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.
T Consensus 171 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~ 250 (500)
T 2j6l_A 171 VAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQ 250 (500)
T ss_dssp THHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTCSEEEEESCHH
T ss_pred hhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHH
Confidence 99999999999999999999999999999999988875 56999999999999778899999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcc
Q 009407 266 AGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKAL 344 (535)
Q Consensus 266 ~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l 344 (535)
+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++
T Consensus 251 ~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 330 (500)
T 2j6l_A 251 VGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQI 330 (500)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999999999999999999999999999999988888 899999999999999
Q ss_pred cccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccce
Q 009407 345 KVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424 (535)
Q Consensus 345 ~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl 424 (535)
++|+|.|+++++|||+++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 331 ~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 406 (500)
T 2j6l_A 331 RVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMD----RPGNYVEPTIVTGLGHDASIAHTETFAPIL 406 (500)
T ss_dssp CBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCS----SSSSCBCCEEEESCCTTCHHHHSCCSSSEE
T ss_pred ccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccC----CCCCEEcCEEEECCCCcChhhcCcccCceE
Confidence 9999999999999999999999999999999999999999997532 358999999999999999999999999999
Q ss_pred EEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHH--hhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHH
Q 009407 425 LCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQ--TEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502 (535)
Q Consensus 425 ~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~--~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~ 502 (535)
+|++|+|+||||+++|+++|||+++|||+|.+++++++ +++++|+|+||++.....+.+||||+|.||+| +++|.+
T Consensus 407 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G--~~~g~~ 484 (500)
T 2j6l_A 407 YVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGG--RESGSD 484 (500)
T ss_dssp EEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSC--CEESTT
T ss_pred EEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCC--CcchHH
Confidence 99999999999999999999999999999999999999 77999999999876544578999999999999 679999
Q ss_pred HHHhchheeEEEecc
Q 009407 503 GVNFYTQIKTVTQQW 517 (535)
Q Consensus 503 gl~~~t~~k~v~~~~ 517 (535)
|+++|++.|+|++++
T Consensus 485 ~~~~f~~~k~v~~~~ 499 (500)
T 2j6l_A 485 AWKQYMRRSTCTINY 499 (500)
T ss_dssp GGGGGEEEEEEEEEC
T ss_pred HHHHhhceEEEEEeC
Confidence 999999999998754
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-102 Score=836.53 Aligned_cols=470 Identities=27% Similarity=0.407 Sum_probs=424.4
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRD 84 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 44678999999987778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC-CCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+...+.. ..+...+++++|+|||++|+|||||+++.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (485)
T 4dng_A 85 DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSI 164 (485)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999988877766654422 345678899999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHH-HHHHHHHHHcCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 198 PVAVTCGNTFVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
++||++||+||+|||+.+|.++ ..|++++.++|+|+|++|+|+|++ +.++.|++||+|++|+||||+.+|+.|++.++
T Consensus 165 ~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa 244 (485)
T 4dng_A 165 APAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAG 244 (485)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999965 58899999999999999999999999999999
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 245 ~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~ 324 (485)
T 4dng_A 245 RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKT 324 (485)
T ss_dssp HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTC
T ss_pred hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999988877 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~-------~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 397 (485)
T 4dng_A 325 VVGPLINERQIEKALEIIEQAKTDGIELAVEGKR-------VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQE 397 (485)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC-------CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHH
Confidence 9999999999999999999999999999999863 589999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||+++|||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 398 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 398 AIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVG--RFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC------------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCC--ccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999986444678999999999999 578999999999999998
Q ss_pred ecc
Q 009407 515 QQW 517 (535)
Q Consensus 515 ~~~ 517 (535)
+++
T Consensus 476 ~~~ 478 (485)
T 4dng_A 476 IQK 478 (485)
T ss_dssp EEC
T ss_pred Eec
Confidence 876
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-102 Score=838.49 Aligned_cols=471 Identities=27% Similarity=0.424 Sum_probs=428.9
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
.+.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 34567899999998877889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC-CCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV-SNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|++++++|+|||..+++.|+..+++.+++++...+...+ ..+.. ..+...++.++|+|||++|+|||||+++++++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988766555 33322 24567889999999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHH-HHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHH
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGAS-IMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARA 274 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 274 (535)
+++||++||+||+|||+.+|.++ ..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a 248 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999995 78899999999999999999999999999999
Q ss_pred hc--CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 275 SA--KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 275 ~~--~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
++ +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 249 a~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 328 (508)
T 3r64_A 249 INGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSA 328 (508)
T ss_dssp HSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTS
T ss_pred hcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCcc
Confidence 98 89999999999999999999999999999999999999999999999988877 8999999999999999999999
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
+++++||++++.+++++.++|++++++|+++++||.. .|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 329 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 329 EGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI-------EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp SSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE-------ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC-------CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 9999999999999999999999999999999999863 589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|
T Consensus 402 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~G--r~~G~~~l~~ft~~k 479 (508)
T 3r64_A 402 EAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLG--RFNGDWAIEEFTTDR 479 (508)
T ss_dssp HHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----------------------CCCHHHHHHHTEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCC--cCccHHHHHHhhceE
Confidence 999999999999999999999999999999999999999999986444678999999999999 578999999999999
Q ss_pred EEEeccC
Q 009407 512 TVTQQWR 518 (535)
Q Consensus 512 ~v~~~~~ 518 (535)
+|++++.
T Consensus 480 ~v~~~~~ 486 (508)
T 3r64_A 480 WIGIKRS 486 (508)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 9988763
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-102 Score=832.33 Aligned_cols=457 Identities=30% Similarity=0.474 Sum_probs=427.7
Q ss_pred ceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHH
Q 009407 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAM 122 (535)
Q Consensus 43 ~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 122 (535)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999975 45 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhh
Q 009407 123 NITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVT 202 (535)
Q Consensus 123 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALa 202 (535)
++++|+|||..+++.|+..+++.+++++.....+.++..+. .+...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887766655442 2567889999999999999999999999999999999
Q ss_pred cCCeeeecCCCCChHHHHHHHHHHHHc----CCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 203 CGNTFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 203 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||+||+|||+.+|.++..+++++.++ |+|+|++|+|+|+ .++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 9999999999995 467899999999999999999999999999887
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|+|+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 8999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
|||+++.+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-------~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR-------DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE-------ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC-------CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999863 5899999999 9999999999999999999999999 9999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++|+++|||++||||+|.++++++++++++|+|+||+++.+..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G--r~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLG--REGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEES--CBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCC--CCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999986544458999999999999 68999999999999999876
Q ss_pred c
Q 009407 517 W 517 (535)
Q Consensus 517 ~ 517 (535)
+
T Consensus 464 ~ 464 (486)
T 3pqa_A 464 K 464 (486)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-102 Score=832.80 Aligned_cols=465 Identities=30% Similarity=0.478 Sum_probs=439.6
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 14 ~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (487)
T 2w8n_A 14 DSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLA 91 (487)
T ss_dssp SEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999754 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.++++++..+...++..+....+...++.++|+|||++|+|||||++++++++++||
T Consensus 92 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (487)
T 2w8n_A 92 RIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAAL 171 (487)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999887776666544223455678899999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceeccc---C-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVH---G-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~---g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
++||+||+|||+.+|.++..|++++.++|+|+|++|+|+ | +.++++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 172 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 251 (487)
T 2w8n_A 172 AAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANS 251 (487)
T ss_dssp HHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHHTT
T ss_pred HcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999 8 567889999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCCCC
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEADAD 355 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~~~ 355 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++ +++|+|.|++++
T Consensus 252 ~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~ 331 (487)
T 2w8n_A 252 VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTT 331 (487)
T ss_dssp TCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCC
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 9999999999999999999999999999999999999999999999988888 89999999999999 999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCc-eeccEEEecCCCCcccccccccccceEEeecCCHHH
Q 009407 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGN-FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEE 434 (535)
Q Consensus 356 ~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~-~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~e 434 (535)
+|||+++.+++++.++|++++++|+++++||... +.|+ |++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 332 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-----~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 406 (487)
T 2w8n_A 332 QGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-----QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEE 406 (487)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-----TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-----CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHH
Confidence 9999999999999999999999999999999752 2588 999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 435 AIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 435 ai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|+
T Consensus 407 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~-~~~~PfGG~~~SG~G--~~~G~~~l~~f~~~k~v~ 483 (487)
T 2w8n_A 407 AIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLIS-SVECPFGGVKQSGLG--REGSKYGIDEYLELKYVC 483 (487)
T ss_dssp HHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCC-CTTSCBCCSGGGEES--CBSTTTGGGGGEEEEEEE
T ss_pred HHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCC-CCCCCCCCCCCCCcC--CCchHHHHHHhcCccEEE
Confidence 99999999999999999999999999999999999999987643 467999999999999 679999999999999997
Q ss_pred ec
Q 009407 515 QQ 516 (535)
Q Consensus 515 ~~ 516 (535)
.+
T Consensus 484 ~~ 485 (487)
T 2w8n_A 484 YG 485 (487)
T ss_dssp EC
T ss_pred Ee
Confidence 64
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-101 Score=832.03 Aligned_cols=464 Identities=27% Similarity=0.411 Sum_probs=437.8
Q ss_pred CCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-hccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 41 VPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 41 ~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
+++||||+|+.+. .+++++||+||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4679999999763 7899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCC--CC--CceeeeeeccCceEEeecCCCcchhhHhh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNV--SN--GIDTYSLREPLGVCAGICPFNFPAMIPLW 195 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 195 (535)
|++++++|+|||..+++.|+..+++.+++++...+...++..+.. .. +...++.++|+|||++|+|||||++++++
T Consensus 97 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 176 (501)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999988777666554421 22 34678999999999999999999999999
Q ss_pred hhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 196 MFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 196 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~aa 256 (501)
T 1uxt_A 177 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG 256 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeCcHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999996688899999999999999999999999999987
Q ss_pred cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCC
Q 009407 276 AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADA 354 (535)
Q Consensus 276 ~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~ 354 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++
T Consensus 257 --l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~ 334 (501)
T 1uxt_A 257 --VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334 (501)
T ss_dssp --SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTC
T ss_pred --CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccCC
Confidence 8999999999999999999999999999999999999999999999988887 8999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCC-ceeccEEEecCC---CCcccccccccccceEEeecC
Q 009407 355 DLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHG-NFIGPTILTDVT---ADMECYKEEIFGPVLLCMQAD 430 (535)
Q Consensus 355 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g-~~~~Ptvl~~v~---~d~~i~~eE~FgPvl~v~~~~ 430 (535)
++|||+++.+++++.++|++++++|+++++||.. .| +|++|||+.+++ +||++++||+||||++|++|+
T Consensus 335 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~-------~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~ 407 (501)
T 1uxt_A 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR-------LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407 (501)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB-------CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEES
T ss_pred cccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeC
Confidence 9999999999999999999999999999999863 47 899999999999 999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.
T Consensus 408 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G--~~~G~~~l~~f~~~ 485 (501)
T 1uxt_A 408 DLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYAVEAVTAY 485 (501)
T ss_dssp SHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTTTHHHHEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCC--ccChHHHHHHhCce
Confidence 9999999999999999999999999999999999999999999873234578999999999999 57999999999999
Q ss_pred eEEEecc
Q 009407 511 KTVTQQW 517 (535)
Q Consensus 511 k~v~~~~ 517 (535)
|+|+.++
T Consensus 486 k~v~~~~ 492 (501)
T 1uxt_A 486 KTIVFNY 492 (501)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 9998765
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-101 Score=830.24 Aligned_cols=468 Identities=29% Similarity=0.459 Sum_probs=436.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 114 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999963 5789999999 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc-CCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+...+ ....+...++.++|+|||++|+|||||++++++++
T Consensus 115 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 194 (516)
T 1uzb_A 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999877766654322 12235567889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+++++|+.||+||+|+||||+.+|+.|++.++
T Consensus 195 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 274 (516)
T 1uzb_A 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 5678999999999999999999999999999998
Q ss_pred -----cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCC
Q 009407 276 -----AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 -----~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p 349 (535)
++++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|
T Consensus 275 ~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 354 (516)
T 1uzb_A 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA 354 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG
T ss_pred ccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC
Confidence 789999999999999999999999999999999999999999999999988887 89999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
++++++|||+++.+++++.++|++++++| ++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 355 -~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 428 (516)
T 1uzb_A 355 -EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLE----GEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428 (516)
T ss_dssp -GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred -ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCC----CCCcEECCEEEECCCCCCHhhhccccCceEEEEEe
Confidence 99999999999999999999999999999 8999986421 35899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|+ +++|.+++++||
T Consensus 429 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~-~~~g~~~l~~f~ 507 (516)
T 1uzb_A 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALDYLRLFL 507 (516)
T ss_dssp SSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCC-CBTSHHHHHTTE
T ss_pred CCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCC-ccchHHHHHHcC
Confidence 999999999999999999999999999999999999999999998653 345789999999999995 368999999999
Q ss_pred heeEEEec
Q 009407 509 QIKTVTQQ 516 (535)
Q Consensus 509 ~~k~v~~~ 516 (535)
+.|+|+.+
T Consensus 508 ~~k~v~~~ 515 (516)
T 1uzb_A 508 EMKAVAER 515 (516)
T ss_dssp EEEEEEEE
T ss_pred CeeEEEec
Confidence 99999764
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-101 Score=824.71 Aligned_cols=452 Identities=25% Similarity=0.362 Sum_probs=429.4
Q ss_pred eEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh
Q 009407 57 YIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ 136 (535)
Q Consensus 57 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 136 (535)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCCh
Q 009407 137 GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDP 216 (535)
Q Consensus 137 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 216 (535)
.|+..+++.+++++...+...+...+ ...+...++.++|+|||++|+|||||++++++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKL-NSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEE-CCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeec-cCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 99999999999999887766555443 22456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcCceecccCChh-HHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 217 GASIMLAELAMEAGLPDGVLNIVHGTHD-TVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 217 ~~~~~l~~~l~~aGlP~g~v~vv~g~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
.++..|++++.++|+|+|++|+|+|+++ .++ |+.||+||+|+||||+.+|+.|++.++++++|+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 9999999999999999999999999654 566 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888 899999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 323 a~~~Ga~v~~gG~~~~----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d 398 (484)
T 3ros_A 323 AIDAGAKVFYQYPEID----SKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSD 398 (484)
T ss_dssp HHHTTCEEEEECCCCC----CSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSC
T ss_pred HHHcCCeEEecCCcCC----CCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCC
Confidence 9999999999997532 469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.++
T Consensus 399 ~~~a~~~~~~l~aG~V~vN~~~~-~~~~~PfGG~k~SG~G--r~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 399 IDRAKKVSAQIETGMTVINGRWI-TSGELPFGGIKKSGYG--RELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHHSCSSCCEETSCCC-CCTTSCBCCSGGGEES--CBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHHhCccceEEECCCCC-CCCCCCcCCcCcccCC--cCchHHHHHHhheeEEEEECC
Confidence 99999999999999999999653 4578999999999999 689999999999999998764
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-101 Score=825.10 Aligned_cols=463 Identities=30% Similarity=0.456 Sum_probs=434.8
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 81 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 81 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 357899999997643 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCC----cee-eeeeccCceEEeecCCCcchhhHh
Q 009407 120 LAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNG----IDT-YSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
|++++++|+|||..+++.|+..+++.+++++...+...++..+....+ ... ++.++|+|||++|+|||||+.+.+
T Consensus 82 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (475)
T 1euh_A 82 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 161 (475)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHH
Confidence 999999999999999999999999999999987766555433312123 456 889999999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 162 ~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 162 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999996 4688999999999999999999999999998
Q ss_pred HhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCC
Q 009407 274 ASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 274 a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
++ ++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~- 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED- 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-
Confidence 87 8999999999999999999999999999999999999999999999988887 8999999999999999999999
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCH
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSL 432 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~ 432 (535)
++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~-------~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 319 DADITPLIDTKSADYVEGLINDANDKGATALTEIKR-------EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE-------ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc-------CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999999999999999999999999999999999863 4899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcC-CCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 433 EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV-PIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 433 ~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~-~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+ +... .+.+||||+|.||+| +++|++|+++||+.|
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~-~~~~pfGG~k~SG~G--~~~g~~~~~~~~~~k 468 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRG-TDNFPFLGAKKSGAG--IQGVKYSIEAMTTVK 468 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCC-STTSCBCCEETTEES--CBSHHHHHHHTEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCC-CCCCCcCCCCCCCcC--CCccHHHHHHhCCee
Confidence 999999999999999999999999999999999999999998 6543 578999999999999 689999999999999
Q ss_pred EEEecc
Q 009407 512 TVTQQW 517 (535)
Q Consensus 512 ~v~~~~ 517 (535)
+|+.++
T Consensus 469 ~v~~~~ 474 (475)
T 1euh_A 469 SVVFDI 474 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998754
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-101 Score=826.02 Aligned_cols=466 Identities=31% Similarity=0.469 Sum_probs=417.9
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999987788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHh-hhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDA-QGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|++++++|+|||..++ ..|+..+++.++++++......+... +...++.++|+|||++|+|||||+++++++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 78999999999999987776554321 23467899999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++++
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~ 241 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKD 241 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTT
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 558899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.|+++++
T Consensus 242 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 321 (478)
T 3ty7_A 242 FKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQV 321 (478)
T ss_dssp TCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred CCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI 436 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai 436 (535)
||++++.+++++.++|++++++|+++++||.... .....|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~-~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi 400 (478)
T 3ty7_A 322 GPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP-EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAI 400 (478)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCC-TTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCc-cccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHH
Confidence 9999999999999999999999999999994321 112469999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 437 KIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 437 ~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+++|+++|||+++|||+|.++++++++++++|+|+||+ . ...+.+||||+|.||+| +++|++|+++||+.|+|+.
T Consensus 401 ~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~-~~~~~~PfGG~k~SG~G--~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 401 QIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-A-GRKPDLPFGGYKQSGLG--REWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-C-C------------------------CCGGGEEEEEEET
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-C-CCCCCCCcCCcCcCcCC--ccchHHHHHHhcCeEEEEE
Confidence 99999999999999999999999999999999999999 3 33468999999999999 5799999999999999874
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-99 Score=807.11 Aligned_cols=455 Identities=28% Similarity=0.456 Sum_probs=431.2
Q ss_pred CCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 54 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
+..+++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|+++++.|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCC
Q 009407 134 DAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSE 213 (535)
Q Consensus 134 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 213 (535)
+++.|+..+++.++++++......+.. +....+...+++++|+|||++|+|||||+++.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999998877665543 2223455678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeee
Q 009407 214 KDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIV 293 (535)
Q Consensus 214 ~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV 293 (535)
.+|.++..+++++.++|+|+|++|+|+|+.+.+..|+.||+|+.|+||||+.+|+.|++.++++++|+++|||||||+||
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~iV 243 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEEE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccEE
Confidence 99999999999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 294 LPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 294 ~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|
T Consensus 244 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i 323 (462)
T 3etf_A 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQV 323 (462)
T ss_dssp CTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999988877 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 324 ~~a~~~ga~~~~gg~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 324 QASVAEGARLLLGGEKIA----GEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHTTCEEEECCSBCS----SSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHCCCEEEeCCcccC----CCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 999999999999997543 4699999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+|.++++++++++++|+|+||++.. ..+.+||||+|.||+| +++|++|+++||+.|+|+.+
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~-~~~~~PfGG~k~SG~G--~~~g~~g~~~~~~~k~v~~~ 460 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSA-SDARVAFGGVKKSGFG--RELSHFGLHEFCNVQTVWKN 460 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCC-CCTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEEC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCC-CCCCCCcCCcCCCCCC--ccchHHHHHHHhceeEEEEe
Confidence 9999999999999999999999754 3578999999999999 68999999999999998763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-99 Score=809.69 Aligned_cols=461 Identities=27% Similarity=0.383 Sum_probs=433.5
Q ss_pred CceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHH
Q 009407 42 PNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLA 121 (535)
Q Consensus 42 ~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 121 (535)
++||||+|+.+. +..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999864 4679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhh
Q 009407 122 MNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAV 201 (535)
Q Consensus 122 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~AL 201 (535)
+++++|+|||..+++.|+..+++.+++++...+...+...+. ..+...++.++|+|||++|+|||||+.++++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999998777666554331 2234556779999999999999999999999999999
Q ss_pred hcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 202 TCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 202 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+.+.+++|+.||+||+|+||||+.+|+.|++.++.+++|+
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTTSE
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999998
Q ss_pred -EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccC-CCCCCCCcC
Q 009407 282 -QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNA-GTEADADLG 357 (535)
Q Consensus 282 -~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~-p~~~~~~~G 357 (535)
++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++|+ |.|+++++|
T Consensus 245 ~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~~G 324 (490)
T 3ju8_A 245 LALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMG 324 (490)
T ss_dssp EEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCSBC
T ss_pred EEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCccc
Confidence 799999999999999999999999999999999999999999998887 6999999999999999999 999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIK 437 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~ 437 (535)
|++++.+++++.++|++++++|+++++||...+ ..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 325 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 325 AVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI----DGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCS----TTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEECCCccC----CCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999997543 479999999998 999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 438 IVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 438 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++|+++|||++||||+|.++++++++++++|+|+||++..+..+.+||||+|.||++ |+++|++.|+|+...
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~--------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH--------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS--------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh--------HHHhhheeEEEEEec
Confidence 999999999999999999999999999999999999986555678999999999875 379999999988654
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-99 Score=815.70 Aligned_cols=472 Identities=23% Similarity=0.313 Sum_probs=436.2
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+..+++||||+|+.+. ..+.++||+| |+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 61 ~~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 4568899999999753 4678999998 799999999999999999999999999999999999999999999999998
Q ss_pred -HHHHHHHHHHHhCCChHHhhhh-HHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHh
Q 009407 117 -IDKLAMNITTEQGKTLKDAQGD-VFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPL 194 (535)
Q Consensus 117 -~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~ 194 (535)
+++|+.++++|+|||+.+++.| +..+++.+++++.....+.+........+...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999887 99999999999988877665432212233445677888999999999999999999
Q ss_pred hhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHH
Q 009407 195 WMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273 (535)
Q Consensus 195 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 273 (535)
+++++|| +||+||+|||+.+|+++..++++|.++|+|+|+||+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 5999999999999999999999999999999999999995 4678999999999999999999999999999
Q ss_pred HhcCCC------eEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc
Q 009407 274 ASAKGK------RVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV 346 (535)
Q Consensus 274 a~~~~~------~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v 346 (535)
++.+++ |+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 999888 49999999999999999999999999999999999999999999988888 89999999999999999
Q ss_pred cCC-CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccce
Q 009407 347 NAG-TEADADLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVL 424 (535)
Q Consensus 347 G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl 424 (535)
|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+ ..|+|++|||+.+++++|++++||+||||+
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~----~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl 453 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE----SVGYYVEPCIIESKDPQEPIMKEEIFGPVL 453 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEEC----SSSCEECCEEEEESCTTCGGGTSCCCSSEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCC----CCCcEecCEEEecCCCCChhhcCCCcCeEE
Confidence 999 9999999999999999999999999996 7999999997643 469999999999999999999999999999
Q ss_pred EEeecCC--HHHHHHHH-HcCCCCcEEEEecCCHHHHHHHHhhcc--eeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCc
Q 009407 425 LCMQADS--LEEAIKIV-NKNQYGNGAAIFTSSGAAARKFQTEIE--AGQVGINVPIP-VPLPFFSFTGSKASFAGDLNF 498 (535)
Q Consensus 425 ~v~~~~~--~~eai~~~-N~~~~gLsa~V~t~d~~~a~~~~~~l~--~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~ 498 (535)
+|++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||+.+. ...+.+||||+|.||+|+ +.
T Consensus 454 ~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~-~~ 532 (563)
T 4e3x_A 454 TVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTND-KP 532 (563)
T ss_dssp EEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCC-CT
T ss_pred EEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCC-cc
Confidence 9999997 79999999 789999999999999999999999975 99999999753 335789999999999985 57
Q ss_pred chHHHHHhchheeEEEecc
Q 009407 499 YGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 499 ~g~~gl~~~t~~k~v~~~~ 517 (535)
+|+++|++|++.|+|+.++
T Consensus 533 ~G~~~l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 533 GGPHYILRWTSPQVIKETH 551 (563)
T ss_dssp TSTTGGGGGBCCEEEEEEC
T ss_pred CCHHHHHHhCceEEEEEeC
Confidence 8999999999999999876
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-98 Score=800.16 Aligned_cols=457 Identities=22% Similarity=0.287 Sum_probs=426.1
Q ss_pred CCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 54 SSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 54 ~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
+.++++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|+++++.|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HhhhhHHHHHHHHHHHHhhHHHh-cCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCC
Q 009407 134 DAQGDVFRGLEVVEHSCGMATLQ-MGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPS 212 (535)
Q Consensus 134 ~a~~ev~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps 212 (535)
++..|+...++.+++++...... .........++......++|+|||++|+|||||+++.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 45679999999999988766544 33333323345667788899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceee
Q 009407 213 EKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGI 292 (535)
Q Consensus 213 ~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~i 292 (535)
+.+|.++..+++++.++|+|+|++|+++|+.+.+..|+.| +++|+||||+.+|+.|++.++++++|+++|||||||+|
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 9999999999999999999999999999999999999987 89999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHH
Q 009407 293 VLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRL 371 (535)
Q Consensus 293 V~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~ 371 (535)
|++|||++.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 241 V~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~ 320 (474)
T 4h7n_A 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDH 320 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHH
Confidence 9999999999999999999999999999999988888 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
+++++++|+++++||...+ ...|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 321 i~~a~~~ga~v~~Gg~~~~---~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~ 397 (474)
T 4h7n_A 321 ILDAVEKGAVIHCGGKVEE---LGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVF 397 (474)
T ss_dssp HHHHHHTTCEEEECCCCEE---ETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEE
T ss_pred HHHHHhhCceeccCCcccc---cCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEE
Confidence 9999999999999987543 2468999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+|.++++++++++++|+|+||+++. ...+.+||||+|.||+|. +++|.+|+++|++.|+|+++.
T Consensus 398 t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~-~~~G~~g~~~f~~~k~v~~~~ 463 (474)
T 4h7n_A 398 AGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGG-SRVGAAGLKRFLRKQAFLIKT 463 (474)
T ss_dssp CSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESC-CSSTTHHHHTTEEEEEEEEEC
T ss_pred eCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCC-CcchHHHHHHhCeEEEEEECC
Confidence 99999999999999999999998753 334789999999999985 468999999999999998875
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-96 Score=835.78 Aligned_cols=471 Identities=30% Similarity=0.414 Sum_probs=442.0
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCC-CCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPAT-QEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
..+++||||+|+.+ +.+++++||+| ++++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|++++
T Consensus 530 ~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 46789999999964 57899999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMF 197 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l 197 (535)
++|++++++|+|||..++..|+..++++++|++.....+.+...+....+...++.++|+|||++|+|||||+++.++++
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~ 687 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999988877665443322456678889999999999999999999999999
Q ss_pred hhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh-
Q 009407 198 PVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARAS- 275 (535)
Q Consensus 198 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~- 275 (535)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 688 a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~ 767 (1026)
T 4f9i_A 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAK 767 (1026)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999995 568999999999999999999999999999988
Q ss_pred -----cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCC
Q 009407 276 -----AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 -----~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p 349 (535)
++++|+++|+|||||+||++|||+|.|++.+++|+|.|+||.|++++|+||+++ +|+|+++|+++++++++|+|
T Consensus 768 ~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p 847 (1026)
T 4f9i_A 768 VHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPS 847 (1026)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred ccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCc
Confidence 468999999999999999999999999999999999999999999999988888 89999999999999999999
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeec
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
.|+++++||++++.+++++.++|++++++| ++++||...+ ..|+|+.|||+.+++++|++++||+||||++|++|
T Consensus 848 ~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~----~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 922 (1026)
T 4f9i_A 848 EDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPA----GEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRA 922 (1026)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCS----SSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCC----CCCceecceeeecCCCCccccCceecCcEEEEEEe
Confidence 999999999999999999999999999999 9999986532 24999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhch
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYT 508 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t 508 (535)
+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. ..+.+||||+|.||+|+ +.+|++++++|+
T Consensus 923 ~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~~l~~f~ 1001 (1026)
T 4f9i_A 923 KDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGT-KAGGPDYLLHFM 1001 (1026)
T ss_dssp SSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSC-CBTSTTTGGGGE
T ss_pred CCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCC-CcCCHHHHHHhc
Confidence 9999999999999999999999999999999999999999999997643 34789999999999995 468999999999
Q ss_pred heeEEEecc
Q 009407 509 QIKTVTQQW 517 (535)
Q Consensus 509 ~~k~v~~~~ 517 (535)
+.|+|++++
T Consensus 1002 ~~k~v~~~~ 1010 (1026)
T 4f9i_A 1002 DPRVVTENT 1010 (1026)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEec
Confidence 999998876
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-96 Score=792.59 Aligned_cols=468 Identities=18% Similarity=0.252 Sum_probs=420.3
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHh-chhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQA-FPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+.|+.++.++|.++|+++++.|+++++
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRG 84 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 357899999997644 479999999999999999988 8999999999999 5999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcC-------ccccCCCC-CceeeeeeccC-ceEEeecCCCcc
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG-------EYVPNVSN-GIDTYSLREPL-GVCAGICPFNFP 189 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~P~-GVv~~I~p~N~P 189 (535)
+|++++++|+|||..+++.|+..+++.+++++...+.+.+ +..+.... ....+..++|+ |||++|+|||||
T Consensus 85 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P 164 (534)
T 2y53_A 85 DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFP 164 (534)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchH
Confidence 9999999999999999998999999999999887665532 21121111 22457889997 999999999999
Q ss_pred hhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC-CCcCceecccCChhHHHHHHhC-CCcCEEEEeCChHHH
Q 009407 190 AMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG-LPDGVLNIVHGTHDTVNAICDD-ANIRAISFVGSNVAG 267 (535)
Q Consensus 190 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~g~v~vv~g~~~~~~~L~~~-~~v~~V~ftGs~~~g 267 (535)
++++++++++||++||+||+|||+.+|.++..+++++.++| +|+|++|+|+|+... +..+ +++|+|+||||+.+|
T Consensus 165 ~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~---l~~~l~~vd~V~FTGS~~~G 241 (534)
T 2y53_A 165 SWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAG---LLDQIRSFDVVSFTGSADTA 241 (534)
T ss_dssp THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTT---SGGGCCTTCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHH---HHhcccccCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999 799999999995421 3333 579999999999999
Q ss_pred HHHHHHHh--cCCCeEEEeCCCcceeeeCCCC-----CHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHH
Q 009407 268 MHIYARAS--AKGKRVQSNMGAKNHGIVLPDA-----NMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVE 339 (535)
Q Consensus 268 ~~i~~~a~--~~~~~v~lelgG~~p~iV~~dA-----dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~ 339 (535)
+.|++.++ +++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++
T Consensus 242 ~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 321 (534)
T 2y53_A 242 ATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKA 321 (534)
T ss_dssp HHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHH
Confidence 99998775 8899999999999999999999 99999999999999999999999999988888 8999999999
Q ss_pred HHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCC--CCCCCceeccEEEecCCCC--cccc
Q 009407 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVP--GYEHGNFIGPTILTDVTAD--MECY 415 (535)
Q Consensus 340 ~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~--~~~~g~~~~Ptvl~~v~~d--~~i~ 415 (535)
+++++++|+|.|+++++|||+++.+++++.++|+++ .+|+++++||...... +...|+|++|||+.+++++ |+++
T Consensus 322 ~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 400 (534)
T 2y53_A 322 KLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLH 400 (534)
T ss_dssp HHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTT
T ss_pred HHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHH
Confidence 999999999999999999999999999999999999 6899999998642110 1135899999999999987 6899
Q ss_pred cccccccceEEeecC---CH-----HHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc--ceeEEEEcCCCC--------
Q 009407 416 KEEIFGPVLLCMQAD---SL-----EEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI--EAGQVGINVPIP-------- 477 (535)
Q Consensus 416 ~eE~FgPvl~v~~~~---~~-----~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l--~~G~V~iN~~~~-------- 477 (535)
+||+||||++|++|+ |+ ||||+++|+++|||++||||+|.++++++++++ ++|+|+||++..
T Consensus 401 ~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~ 480 (534)
T 2y53_A 401 DVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHG 480 (534)
T ss_dssp TCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSS
T ss_pred hCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccC
Confidence 999999999999999 99 999999999999999999999999999999999 899999998632
Q ss_pred CCCCCCCccCCCCCCCCCCCc-chHHHHHhchheeEEEe
Q 009407 478 VPLPFFSFTGSKASFAGDLNF-YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 478 ~~~~~~pfGG~~~Sg~G~~~~-~g~~gl~~~t~~k~v~~ 515 (535)
...+.+||||+|.||+| ++ +|++|+++|++.|+|..
T Consensus 481 ~~~~~~pfGG~k~SG~G--r~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 481 NVMPMSLHGGPGRAGGG--EELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCCTTSEECCSGGGCSC--CEESGGGGGGGGEEEEEEEE
T ss_pred CCCCCCCCCCcccCCCC--CCcchHHHHHHHhhhheeec
Confidence 12478999999999999 46 69999999999999875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-94 Score=767.02 Aligned_cols=443 Identities=23% Similarity=0.319 Sum_probs=397.0
Q ss_pred CeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHh
Q 009407 56 EYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA 135 (535)
Q Consensus 56 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 135 (535)
..+++.||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea 85 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-hhHHHHHHHHHHHHhhHHHhc-CccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecC
Q 009407 136 Q-GDVFRGLEVVEHSCGMATLQM-GEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211 (535)
Q Consensus 136 ~-~ev~~~~~~l~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKp 211 (535)
+ .|+..+++.++++++..+... ++..+. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 86 ~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKp 165 (457)
T 3lns_A 86 DLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKP 165 (457)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEC
Confidence 8 599999999999987765443 222221 113456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCccee
Q 009407 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHG 291 (535)
Q Consensus 212 s~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~ 291 (535)
|+.+|.++..+++++.++ +|+|++|+|+|+.+.++.|++ ++||+|+||||+.+|+.|++.++++++|+++|||||||+
T Consensus 166 s~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~ 243 (457)
T 3lns_A 166 SETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPL 243 (457)
T ss_dssp CTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEE
T ss_pred CCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCC
Confidence 999999999999999999 999999999998888999998 689999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHH
Q 009407 292 IVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICR 370 (535)
Q Consensus 292 iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~ 370 (535)
||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|++++++++ |.++ ++||++++.+++++.+
T Consensus 244 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~ 318 (457)
T 3lns_A 244 IVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRLVS 318 (457)
T ss_dssp EECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHH
T ss_pred eECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999988888 8999999999999887 7776 9999999999999999
Q ss_pred HHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHc-CCCCcEEE
Q 009407 371 LIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNK-NQYGNGAA 449 (535)
Q Consensus 371 ~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~-~~~gLsa~ 449 (535)
+|+++ ++++++||... +.|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 319 ~i~~a---~~~~~~gg~~~-----~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 319 LLEAT---QGQVLVGSQAD-----VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHC---CSEEEECCCEE-----GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHhc---CCeEEeCCccC-----CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 99985 35999999753 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EecCCHHHHHHHHhhcceeEEEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 450 IFTSSGAAARKFQTEIEAGQVGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 450 V~t~d~~~a~~~~~~l~~G~V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|||+|.++++++++++++|+|+||++. ....+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G--~~~g~~~~~~f~~~k~v~~ 455 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMG--EYHGHFSYLTFTHKKSVRI 455 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEEC--CBSHHHHHHHTEEEEEEEE
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCC--CCchHHHHHHhhCeeEEEe
Confidence 999999999999999999999999975 334678999999999999 5899999999999999875
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-92 Score=756.08 Aligned_cols=428 Identities=26% Similarity=0.355 Sum_probs=393.5
Q ss_pred CCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhH
Q 009407 75 TTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMA 153 (535)
Q Consensus 75 ~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 153 (535)
.+.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..+++++...
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999997 59999999888877654
Q ss_pred H-HhcCcccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcC
Q 009407 154 T-LQMGEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAG 230 (535)
Q Consensus 154 ~-~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 230 (535)
. +....... ....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 3 33322111 0112446788999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHH
Q 009407 231 LPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAG 310 (535)
Q Consensus 231 lP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~ 310 (535)
+|+|++|+|+|+.+.+..|+.| +||+|+||||+.+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~ 252 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGK 252 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHH
Confidence 9999999999987777888888 799999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccc
Q 009407 311 FGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNI 389 (535)
Q Consensus 311 ~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 389 (535)
|.|+||.|++++||||+++ +|+|+++|+++++++ +|+|.++++++||++++.+++++.++| +|+++++||...
T Consensus 253 ~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~ 326 (469)
T 3sza_A 253 FMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD 326 (469)
T ss_dssp HGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE
T ss_pred HhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC
Confidence 9999999999999988777 899999999999988 699999999999999999999999998 599999999753
Q ss_pred cCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeE
Q 009407 390 VVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQ 469 (535)
Q Consensus 390 ~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~ 469 (535)
..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 327 -----~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 327 -----AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp -----TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred -----CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 470 VGINVPI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 470 V~iN~~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+||++. ....+.+||||+|.||+| +++|.+|+++||+.|+|+.+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~G--r~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMG--SYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEEC--CBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccC--ccchHHHHHHhhCeeEEEECC
Confidence 9999975 344678999999999999 589999999999999998763
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-92 Score=762.74 Aligned_cols=458 Identities=20% Similarity=0.263 Sum_probs=412.9
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeE-EecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhc
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVS-QLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRD 116 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 116 (535)
+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999997542 99999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHh--cCccc----cC--CCCCceeeeeeccCceEEeecCCCc
Q 009407 117 IDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQ--MGEYV----PN--VSNGIDTYSLREPLGVCAGICPFNF 188 (535)
Q Consensus 117 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~--~~~~~----~~--~~~~~~~~~~~~P~GVv~~I~p~N~ 188 (535)
+++|++++++|+|||..+++.|+..+++.++++++..+.. .+... +. ...+...++.++|+|||++|+||||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 181 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNF 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcc
Confidence 9999999999999999999999999999999999877652 22221 10 0123456789999999999999999
Q ss_pred chhhHh--hhhhhhhhcCCeeeecCCCCChHHHHHHHHHH----HHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEe
Q 009407 189 PAMIPL--WMFPVAVTCGNTFVLKPSEKDPGASIMLAELA----MEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFV 261 (535)
Q Consensus 189 P~~~~~--~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ft 261 (535)
|+.+.+ +++++||++||+||+|||+.+|.++..+++++ .++|+|+|++|+|+| +.+++++|+.||+||+|+||
T Consensus 182 P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fT 261 (528)
T 3v4c_A 182 PLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261 (528)
T ss_dssp TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 999865 89999999999999999999999999999875 578999999999999 56889999999999999999
Q ss_pred CChHHHHHHHHHHhcCC--CeEEEeCCCcceeeeCCCC---CHHHHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHH
Q 009407 262 GSNVAGMHIYARASAKG--KRVQSNMGAKNHGIVLPDA---NMDATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWE 334 (535)
Q Consensus 262 Gs~~~g~~i~~~a~~~~--~~v~lelgG~~p~iV~~dA---dl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~ 334 (535)
||+.+|+.|++.+++++ +|+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++||||+++ +|+|+
T Consensus 262 GS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~ 341 (528)
T 3v4c_A 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFT 341 (528)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHH
T ss_pred CChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHH
Confidence 99999999999999998 9999999999999999999 88999999999999999999999999998885 79999
Q ss_pred HHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCC---
Q 009407 335 DKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD--- 411 (535)
Q Consensus 335 ~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d--- 411 (535)
++|++++++++.| +.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 342 ~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~-------~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 342 TAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES-------SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-------CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-------CCceeccEEEEecCccccc
Confidence 9999999998754 57999999888888887764 479999999863 6899999999988887
Q ss_pred cccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEEcCCCC-C-CCCCCCc
Q 009407 412 MECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS--SGAAARKFQTEIE--AGQVGINVPIP-V-PLPFFSF 485 (535)
Q Consensus 412 ~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~--d~~~a~~~~~~l~--~G~V~iN~~~~-~-~~~~~pf 485 (535)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+|+||+++. . ..+.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999653 2 3478999
Q ss_pred cC-CCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 486 TG-SKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 486 GG-~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|| +|.||+|+.+.+|++|+++|++.|++ .++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~-q~~ 517 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY-QNM 517 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE-ESC
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh-hcC
Confidence 99 99999996544599999999999974 444
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-89 Score=739.73 Aligned_cols=446 Identities=16% Similarity=0.203 Sum_probs=403.8
Q ss_pred CCCCCeEEeecCCCCCee-EEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCC
Q 009407 52 SRSSEYIDVINPATQEVV-SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGK 130 (535)
Q Consensus 52 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 130 (535)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 82 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETAL 82 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Confidence 345678999999999999 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHhhhhHHHHHHHHHHHHhhHHH--hcCccc----cCC-CCC-ceeeeeeccCceEEeecCCCcchhhH--hhhhhhh
Q 009407 131 TLKDAQGDVFRGLEVVEHSCGMATL--QMGEYV----PNV-SNG-IDTYSLREPLGVCAGICPFNFPAMIP--LWMFPVA 200 (535)
Q Consensus 131 ~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~-~~~-~~~~~~~~P~GVv~~I~p~N~P~~~~--~~~l~~A 200 (535)
|..+++.|+..+++.++++++..+. ..+..+ +.. +.+ ...+++++|+|||++|+|||||++++ .+++++|
T Consensus 83 ~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~A 162 (510)
T 1ez0_A 83 PEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASA 162 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHH
Confidence 9999999999999999999887664 222222 101 112 23578999999999999999999985 4999999
Q ss_pred hhcCCeeeecCCCCChHHHHHHHHHH----HHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 201 VTCGNTFVLKPSEKDPGASIMLAELA----MEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 201 LaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
|++||+||+|||+.+|.++..+++++ .++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 163 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 242 (510)
T 1ez0_A 163 LAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAH 242 (510)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh
Confidence 99999999999999999999999998 568999999999999 6778999999999999999999999999999999
Q ss_pred cCC--CeEEEeCCCcceeeeCCCCCHH--HHHHHHHHHHhhccCCCccCcceEEEeCC--hhHHHHHHHHHHhcccccCC
Q 009407 276 AKG--KRVQSNMGAKNHGIVLPDANMD--ATLNALAAAGFGAAGQRCMALSTVVFVGD--SKSWEDKLVERAKALKVNAG 349 (535)
Q Consensus 276 ~~~--~~v~lelgG~~p~iV~~dAdl~--~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~--~d~f~~~l~~~~~~l~vG~p 349 (535)
+++ +|+++|||||||+||++|||+| .|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++
T Consensus 243 ~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~--- 319 (510)
T 1ez0_A 243 ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP--- 319 (510)
T ss_dssp HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC---
T ss_pred ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC---
Confidence 886 9999999999999999999999 99999999999999999999999999887 69999999999998873
Q ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHH-cCCEEEeccccccCCCCCCCceeccEEEecCCCC---cccccccccccceE
Q 009407 350 TEADADLGPVISKQAKERICRLIQSGIE-SGARLLLDGRNIVVPGYEHGNFIGPTILTDVTAD---MECYKEEIFGPVLL 425 (535)
Q Consensus 350 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d---~~i~~eE~FgPvl~ 425 (535)
||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 320 -------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~--------~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 320 -------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA--------ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp -------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC--------CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred -------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC--------CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 688999999999999999984 7999999985 2889999999988777 99999999999999
Q ss_pred EeecCCHHHHHHHHHcCCCCcEEEEecCCH--HHHHHHHhhc--ceeEEEEcCCCCC--CCCCCCccC-CCCCCCCCCCc
Q 009407 426 CMQADSLEEAIKIVNKNQYGNGAAIFTSSG--AAARKFQTEI--EAGQVGINVPIPV--PLPFFSFTG-SKASFAGDLNF 498 (535)
Q Consensus 426 v~~~~~~~eai~~~N~~~~gLsa~V~t~d~--~~a~~~~~~l--~~G~V~iN~~~~~--~~~~~pfGG-~~~Sg~G~~~~ 498 (535)
|++|+|+||||+++|+++|||++||||+|. ++++++++++ ++|+|+||++... ..+.+|||| +|.||+|+.+.
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7999999999 7999999987532 246799999 78999986556
Q ss_pred chHHHHHhchheeEEEe
Q 009407 499 YGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 499 ~g~~gl~~~t~~k~v~~ 515 (535)
+|++|+++|++.|++..
T Consensus 465 ~G~~gl~~~~~~k~~~~ 481 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQA 481 (510)
T ss_dssp SSGGGGGGGEEEEEEES
T ss_pred ccHHHHHHhheEEEEcC
Confidence 89999999999987643
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-88 Score=766.31 Aligned_cols=435 Identities=24% Similarity=0.345 Sum_probs=407.1
Q ss_pred ecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHh
Q 009407 72 LPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCG 151 (535)
Q Consensus 72 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~ 151 (535)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..++..|+..+++.+++++.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHhcCcc--ccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHc
Q 009407 152 MATLQMGEY--VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEA 229 (535)
Q Consensus 152 ~~~~~~~~~--~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 229 (535)
..+...+.. .+ ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++
T Consensus 624 ~a~~~~g~~~~~~-~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eA 702 (1001)
T 3haz_A 624 QGRKLFGSETAMP-GPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEA 702 (1001)
T ss_dssp HHHHHHSSCEECC-CCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhcCcccccc-CCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHh
Confidence 887765432 22 345677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC---CCeEEEeCCCcceeeeCCCCCHHHHHHHH
Q 009407 230 GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAK---GKRVQSNMGAKNHGIVLPDANMDATLNAL 306 (535)
Q Consensus 230 GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~---~~~v~lelgG~~p~iV~~dAdl~~Aa~~i 306 (535)
|+|+|++|+|+|+++.++.|+.||+|++|+||||+.+|+.|++.++.+ ++|+++|+|||||+||++|||+|.|++.+
T Consensus 703 GlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 703 GIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp TCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred CcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999999765599999999999999999999999999998864 89999999999999999999999999999
Q ss_pred HHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEec
Q 009407 307 AAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLD 385 (535)
Q Consensus 307 v~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~g 385 (535)
++|+|.|+||.|+++++|||+++ +|+|+++|+++++++++|+|.++++++||++++.+++++.++|++++++| ++ +|
T Consensus 783 v~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~g 860 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HF 860 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EE
T ss_pred HHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ec
Confidence 99999999999999999988877 89999999999999999999999999999999999999999999999888 88 88
Q ss_pred cccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC--HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHh
Q 009407 386 GRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS--LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQT 463 (535)
Q Consensus 386 g~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~--~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~ 463 (535)
|... +.|+|+.|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++
T Consensus 861 g~~~-----~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~ 933 (1001)
T 3haz_A 861 AGPA-----PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIID 933 (1001)
T ss_dssp ECCC-----CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHH
T ss_pred cccC-----CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHH
Confidence 8643 3599999999974 6889999999999999999996 89999999999999999999999999999999
Q ss_pred hcceeEEEEcCCCCC-CCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 464 EIEAGQVGINVPIPV-PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 464 ~l~~G~V~iN~~~~~-~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++++|+|+||+++.. ..+.+||||+|.||+|. +++|++|+++|++.|+|++++
T Consensus 934 ~l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~-~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 934 RVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGP-KAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp HCCCSEEEESSCSCCCCTTTSCBCCCGGGBCCC-CBTSTTSGGGGEEEEEEEEEC
T ss_pred hCCeeeEEEeCCCcCCCCCCCCCCCcccCcCCC-CCCCHHHHHHhceeeEEEECC
Confidence 999999999997643 34678999999999995 468999999999999998865
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-82 Score=676.50 Aligned_cols=406 Identities=15% Similarity=0.133 Sum_probs=332.5
Q ss_pred EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHh-------CCC
Q 009407 59 DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQ-------GKT 131 (535)
Q Consensus 59 ~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 131 (535)
-++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hH----HhhhhHHHHHHHHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCC
Q 009407 132 LK----DAQGDVFRGLEVVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGN 205 (535)
Q Consensus 132 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN 205 (535)
.. ++..|+..+++.+++++.......++..+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 4678999999999999976555555443311 13456788999999999999887 87777 89999999999
Q ss_pred eeeecCCCCChHHHHHHHHHHHHc----CCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeE
Q 009407 206 TFVLKPSEKDPGASIMLAELAMEA----GLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281 (535)
Q Consensus 206 ~VVlKps~~~~~~~~~l~~~l~~a----GlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v 281 (535)
+||+|||+.+|.++..|++++.++ | |+|++|+|+|+.++++.|+.||+||+|+||||+.+|+.|++.++ ++|+
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~pv 244 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIPV 244 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSCB
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCCE
Confidence 999999999999999999999999 9 99999999996678899999999999999999999999999887 8999
Q ss_pred EEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCC
Q 009407 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVI 360 (535)
Q Consensus 282 ~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli 360 (535)
++|||||||+||++|||+|.|++.+++++|.| ||.|++++||||+++ +| ||+
T Consensus 245 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~- 297 (463)
T 2h5g_A 245 MGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL- 297 (463)
T ss_dssp CSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH-
T ss_pred EEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH-
Confidence 99999999999999999999999999999999 999999999988777 55 333
Q ss_pred CHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHH
Q 009407 361 SKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVN 440 (535)
Q Consensus 361 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N 440 (535)
+.+++++++++|++++.|+.. . ..|+|+ +++|++++||+||||++|++|+|+||||+++|
T Consensus 298 -------~~~~i~~~~~~Ga~v~~G~~~-~----~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN 357 (463)
T 2h5g_A 298 -------FDQIIDMLRVEQVKIHAGPKF-A----SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIH 357 (463)
T ss_dssp -------HHHHHHHHHHTTCEEEECHHH-H----C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCEEEeCCcc-c----ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHH
Confidence 234578888899999854432 1 234442 57899999999999999999999999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCC--cchHHHHHhchheeEEEecc
Q 009407 441 KNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLN--FYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 441 ~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~--~~g~~gl~~~t~~k~v~~~~ 517 (535)
+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|.++ .+|++|+++||+.|+|+.++
T Consensus 358 ~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~-~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 358 KYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRF-SDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGG-CSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred cCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccC-CCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999999987543 478999999999999433 48999999999999998754
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-79 Score=653.84 Aligned_cols=419 Identities=16% Similarity=0.214 Sum_probs=365.6
Q ss_pred EEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHHHH
Q 009407 70 SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVVEH 148 (535)
Q Consensus 70 ~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~ 148 (535)
..++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +....++.+..
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~ 83 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN 83 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999999999999999999999999988764 33333333333
Q ss_pred HHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHH----
Q 009407 149 SCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE---- 224 (535)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~---- 224 (535)
+....+. .+. +. ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++
T Consensus 84 ~~~~~~~-~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 84 YIKDMKT-IGM-LK-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHTTCCC-SEE-EE-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred hhhcccc-cce-ec-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 2221110 111 11 1245567889999999999999999999999999999999999999999999999987654
Q ss_pred HHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCC-CcceeeeCCCCCHHHH
Q 009407 225 LAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMG-AKNHGIVLPDANMDAT 302 (535)
Q Consensus 225 ~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelg-G~~p~iV~~dAdl~~A 302 (535)
++.++|+|+|+||+|+| +.+.++.|+.||+||+|+||||+.+ ++.+++++||+ +|+| ||+|+||++|||++.|
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~A 235 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRA 235 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHH
Confidence 56899999999999999 6789999999999999999999984 56677889999 7888 9999999999999999
Q ss_pred HHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHH-------hcccccCCC-CCCCCcCCCCCHHHHHHHHHHHH
Q 009407 303 LNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERA-------KALKVNAGT-EADADLGPVISKQAKERICRLIQ 373 (535)
Q Consensus 303 a~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~-------~~l~vG~p~-~~~~~~Gpli~~~~~~~~~~~i~ 373 (535)
++.+++++|+|+||.|++++||||+++ +|+|+++|+++. +++++|+|. ++++++||+++.++++++.++++
T Consensus 236 a~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~ 315 (464)
T 3k9d_A 236 VKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAG 315 (464)
T ss_dssp HHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhh
Confidence 999999999999999999999988877 899999999885 467889988 78899999999999999999999
Q ss_pred HHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHH----HHHHcCCCCcEEE
Q 009407 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAI----KIVNKNQYGNGAA 449 (535)
Q Consensus 374 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai----~~~N~~~~gLsa~ 449 (535)
.++.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++
T Consensus 316 ~a~~~ga~vl~gg~~------------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~ 376 (464)
T 3k9d_A 316 LTVPADARVLIAEET------------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLI 376 (464)
T ss_dssp CCCCTTCCEEEEECC------------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hhhcCCCEEEEcCCC------------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEE
Confidence 988899999998742 466778764 89999999999999999997 7999999999999
Q ss_pred EecCCHHHHHHHHhhcceeEEEEcCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEeccC
Q 009407 450 IFTSSGAAARKFQTEIEAGQVGINVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWR 518 (535)
Q Consensus 450 V~t~d~~~a~~~~~~l~~G~V~iN~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~~ 518 (535)
|||+|.++++++++++++|+|+||+++. ...+.+|||| +.+|.| +++|..|+++|++.|+|.....
T Consensus 377 i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g--~~~~~~~~~~~~~~k~v~~~~~ 450 (464)
T 3k9d_A 377 IHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGS--SSSDNIGPENLFNIRRIATGVL 450 (464)
T ss_dssp EECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTC--SCCSBCCGGGSEEEEEEEECCC
T ss_pred EEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCC--cCCCCCCHHHheEEEEEEecCC
Confidence 9999999999999999999999999853 2457899998 567766 6789999999999999987553
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-79 Score=650.07 Aligned_cols=394 Identities=16% Similarity=0.136 Sum_probs=319.9
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCh----HHhh-hhHHH-HHHHHHHHHhh
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL----KDAQ-GDVFR-GLEVVEHSCGM 152 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 152 (535)
.+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .++. .|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999998 7874 78888 88888888876
Q ss_pred HHHhc------CccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHH
Q 009407 153 ATLQM------GEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAE 224 (535)
Q Consensus 153 ~~~~~------~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~ 224 (535)
.+... ++..+.. ..+...++.++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 65543 3322211 12455788999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCcCceecccCCh-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 225 LAM----E----AGLPDGVLNIVHGTH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 225 ~l~----~----aGlP~g~v~vv~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
++. + +|+|+|++|+|+ +. ++++.|+.||+||+|+||||+.+|+.|++.+ ++|+++|||||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 65 6788999999999999999999999999877 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHH-
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKV---NAGTEADADLGPVISKQAKERICRL- 371 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~- 371 (535)
|||+|.|++.+++++|.|+| .|++++||||+++.|+|+++|.++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~id~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~ 310 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKFSKWWEVLENLTLEGGVTIHATKDL-----------------KTAY 310 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBEECHHH-----------------HHHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCHHHHHHHHHHHHHhcCCeecCCHHH-----------------hccc
Confidence 99999999999999999999 999999997766578899999999999987 87643 445
Q ss_pred HHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEe
Q 009407 372 IQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIF 451 (535)
Q Consensus 372 i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~ 451 (535)
|++++ ++++||. | +.||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 311 i~~a~----~~~~gG~---------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 311 FDKLN----ELGKLTE---------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHH----HHTCCCH---------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred ccccc----eeeccCC---------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 66655 3566663 4 689987 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCcc-----CCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 452 TSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFT-----GSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 452 t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfG-----G~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
|+|.++++++++++++|+|+||++... .+.+||| |+|.||+| ++ |++|+++|++.|+|+.+.
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~-~~~~pfG~Gg~~G~~~SG~g--~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRF-ADGFRYGFGAEVGISTSKIH--AR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGG-CC-------------------------CCSGGGEEEEEEEECS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCCCCCCCcceecCCCC--CC-cchHHHHhcceEEEEECC
Confidence 999999999999999999999987543 4678999 99999999 56 999999999999998753
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-77 Score=628.53 Aligned_cols=388 Identities=16% Similarity=0.196 Sum_probs=340.0
Q ss_pred CHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCCh----HHhh--------hhHHHHH
Q 009407 76 TNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTL----KDAQ--------GDVFRGL 143 (535)
Q Consensus 76 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~ 143 (535)
..+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .++. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 345799999999999999999999999999999999999999999999999999986 4553 5899999
Q ss_pred HHHHHHHhhHHHhcCccccCC--CCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHH
Q 009407 144 EVVEHSCGMATLQMGEYVPNV--SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221 (535)
Q Consensus 144 ~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~ 221 (535)
+.+++++.+.+. .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|.++..
T Consensus 92 ~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~ 168 (427)
T 1o20_A 92 KACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKA 168 (427)
T ss_dssp HHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHH
Confidence 999999876553 33332211 23455688999999999999886 47899999999999999999999999999999
Q ss_pred HHHHHH----HcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 222 LAELAM----EAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 222 l~~~l~----~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
+++++. ++|+|+|++|+|+| +. +.++.|..||+||+|+||||+.+|+.|++.+ .+|+++|||||||+||++
T Consensus 169 l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~ 245 (427)
T 1o20_A 169 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDE 245 (427)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeC
Confidence 999997 68999999999998 54 4678888899999999999999999999887 599999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQS 374 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~ 374 (535)
|||+|.|++.+++++|.|+| .|++++||||+++ +|+|+++|++++++++++
T Consensus 246 dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 297 (427)
T 1o20_A 246 SADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------------------- 297 (427)
T ss_dssp TSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE---------------------------
T ss_pred CCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe---------------------------
Confidence 99999999999999999999 9999999988877 899999999999987642
Q ss_pred HHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCC
Q 009407 375 GIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSS 454 (535)
Q Consensus 375 a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d 454 (535)
+.||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 --------~~gg~~~------~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 --------VRGCEKT------RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp --------EEECHHH------HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred --------eecChhh------hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 2233211 12 33 885 34578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCC--CCcchHHHHHhchheeEEEecc
Q 009407 455 GAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGD--LNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 455 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~--~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
.++++++++++++|+|+||++.. ..+.+||||.|.||+|. .+++|++|+++||+.|+|+.++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~-~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTR-FTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGG-GCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCc-cCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 99999999999999999998754 34678999999999973 3467999999999999998765
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-76 Score=628.51 Aligned_cols=389 Identities=19% Similarity=0.210 Sum_probs=330.1
Q ss_pred HHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH----Hhh--------hhHHHHHH
Q 009407 77 NEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK----DAQ--------GDVFRGLE 144 (535)
Q Consensus 77 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~--------~ev~~~~~ 144 (535)
.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 544 37888999
Q ss_pred HHHHHHhhHHHhcCccccC--CCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHH
Q 009407 145 VVEHSCGMATLQMGEYVPN--VSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIML 222 (535)
Q Consensus 145 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l 222 (535)
.+++++.+.+. .+...+. ...+...+++++|+|||++|+||| | +++++++++||++||+||+|||+.+|.++..+
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99998876543 2333331 124567788999999999999998 8 68899999999999999999999999999999
Q ss_pred HHHH----HHcCCCcCceecccC-Ch-hHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCC
Q 009407 223 AELA----MEAGLPDGVLNIVHG-TH-DTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPD 296 (535)
Q Consensus 223 ~~~l----~~aGlP~g~v~vv~g-~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~d 296 (535)
++++ .++|+|+|++|+|+| +. +.++.|..||+||.|+||||+.+|+.|++.+ ++|+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 799999999999998 54 4678888899999999999999999998876 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccc---cCCCCCCCCcCCCCCHHHHHHHHHHH
Q 009407 297 ANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKV---NAGTEADADLGPVISKQAKERICRLI 372 (535)
Q Consensus 297 Adl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~v---G~p~~~~~~~Gpli~~~~~~~~~~~i 372 (535)
||+|.|++.+++++|.|+| .|++++||||+++ +|+|+++|+++++++++ |+|.+ .++|
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHH
Confidence 9999999999999999999 9999999988888 89999999999999988 76531 3556
Q ss_pred HHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEec
Q 009407 373 QSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFT 452 (535)
Q Consensus 373 ~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t 452 (535)
+++. .| ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 321 ~~a~-------------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t 373 (444)
T 4ghk_A 321 EAAG-------------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVT 373 (444)
T ss_dssp HHTT-------------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEEC
T ss_pred Hhcc-------------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEe
Confidence 5432 12 11 345789999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCC--CCcchHHHHHhchheeEEEecc
Q 009407 453 SSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGD--LNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 453 ~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~--~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
+|.++++++++++++|+|+||+++.+ .+.+||||.+.||+|. .+++|++|+++||+.|+|++..
T Consensus 374 ~d~~~a~~~a~~l~aG~V~vN~~~~~-~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 374 EDHDRAMRFLREVDSASVMVNASTRF-ADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp SBHHHHHHHHHHCCSSEEEEEECGGG-CSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCcceEEEcCCCcc-CCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 99999999999999999999998644 4689999999999873 3578999999999999998754
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-75 Score=621.28 Aligned_cols=415 Identities=16% Similarity=0.245 Sum_probs=339.9
Q ss_pred ecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhh-hHHHHHHHH-HHH
Q 009407 72 LPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG-DVFRGLEVV-EHS 149 (535)
Q Consensus 72 v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 149 (535)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+++++.|+|||..+++. ++..+++.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999875 666666655 333
Q ss_pred HhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHH--
Q 009407 150 CGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM-- 227 (535)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-- 227 (535)
... ...+ .++ ...+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~~--~~~g-~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KDE--QTCG-ILE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TTC--CCSE-EC--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hhc--cccc-ccc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 221 1111 111 2234456889999999999999999999999999999999999999999999999998888875
Q ss_pred --HcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHH
Q 009407 228 --EAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLN 304 (535)
Q Consensus 228 --~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~ 304 (535)
++|+|+|++|+|+| +.+.+++|+.||+|++|+||||+.++ +.+++++||+++|+|||||+||++|||+|.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 79999999999999 67899999999999999999999864 456778999999999999999999999999999
Q ss_pred HHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEE
Q 009407 305 ALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383 (535)
Q Consensus 305 ~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~ 383 (535)
.+++++|+|+||.|+++++|||+++ +|+|+++|+++ +||++++.+++++.++|+++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999988888 89999999864 499999999999999998766677776
Q ss_pred eccccccCCCCCCCceeccEE-------EecCCCCcccccccccccceEEeecCCHHHHHHHHHcCC----CCcEEEEec
Q 009407 384 LDGRNIVVPGYEHGNFIGPTI-------LTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ----YGNGAAIFT 452 (535)
Q Consensus 384 ~gg~~~~~~~~~~g~~~~Ptv-------l~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~----~gLsa~V~t 452 (535)
+||...... ...|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||
T Consensus 297 ~G~~~~~~~-~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t 374 (452)
T 3my7_A 297 VGQPATAIA-EMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYT 374 (452)
T ss_dssp TTCCHHHHH-HHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEES
T ss_pred ecCccchhH-HhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEc
Confidence 466432100 02589999997 678999999875 89999999999999999999999985 999999999
Q ss_pred CCHHHHHH---HHhhcceeEEEEcCCCCCCC----------CCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 453 SSGAAARK---FQTEIEAGQVGINVPIPVPL----------PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 453 ~d~~~a~~---~~~~l~~G~V~iN~~~~~~~----------~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
+|.+++++ +++++++|+|+||+++.+.. +.+.+| .+ .+|+....+.-+.+++.+.|+|..
T Consensus 375 ~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~g-~g--~~Gg~~~~~nv~~~~l~n~~~v~~ 447 (452)
T 3my7_A 375 NQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTLG-CG--SWGGNSISENVGPKHLINKKTVAK 447 (452)
T ss_dssp CTTTCHHHHHHHHHHCCCSEEEESCCCC-------------------------------CCCCCGGGGEEEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEeee-cc--ccCCCccCCCCChhHeeeeeEEEe
Confidence 99887777 99999999999999754320 111111 00 123333445566899999998865
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.035 Score=56.52 Aligned_cols=333 Identities=15% Similarity=0.139 Sum_probs=174.2
Q ss_pred hccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCC-C------hHHhhhhHHHHH--------HHHHHHHhhHH---
Q 009407 93 SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGK-T------LKDAQGDVFRGL--------EVVEHSCGMAT--- 154 (535)
Q Consensus 93 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk-~------~~~a~~ev~~~~--------~~l~~~~~~~~--- 154 (535)
.|+..+..+-.+..+.+.+.++++.|+-+...++..-+ . +.-...|+..+. +.|+.++...+
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~ei~~A~~~l~~~~~~ai~~A~~~I~~fh 105 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRDVLEAAWQALPAEQAKALREAAERIRAYA 105 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 35555566666667777777777766655544443321 1 111112222221 12222222211
Q ss_pred -HhcCc-cccCCCCCceeeeeeccCceEEeecCCC---cchhhHhhhhhhhhhcCCe--eeecCCCCChHHHHHHHHHHH
Q 009407 155 -LQMGE-YVPNVSNGIDTYSLREPLGVCAGICPFN---FPAMIPLWMFPVAVTCGNT--FVLKPSEKDPGASIMLAELAM 227 (535)
Q Consensus 155 -~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~l~~ALaaGN~--VVlKps~~~~~~~~~l~~~l~ 227 (535)
..... ..-...+|.....++.|+--|++..|.- ||... +...+||-.+|+. |+.-|.+. -...-.+.-...
T Consensus 106 ~~Q~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~AA~ 183 (423)
T 4gic_A 106 ERQKLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAAAY 183 (423)
T ss_dssp HHHCCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHHHH
T ss_pred HhcccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHHHH
Confidence 11111 1111345666778899999999999954 66444 4457899999986 33344432 111222333345
Q ss_pred HcCCCcCceecccCChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcceeee--CCCCCHH
Q 009407 228 EAGLPDGVLNIVHGTHDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNHGIV--LPDANMD 300 (535)
Q Consensus 228 ~aGlP~g~v~vv~g~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p~iV--~~dAdl~ 300 (535)
.+|+.+ |--+ |+.+...+|.- -|.||.|+=.|..-+..+=.... ..|-..+ .|.+=++| +++||.+
T Consensus 184 l~Gv~e--Iy~v-GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~----g~VgIDm~AGPSEilViAD~~a~p~ 256 (423)
T 4gic_A 184 ISGVDR--VFRI-GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVF----GQVGIDMVAGPSEILVISDGRTDPD 256 (423)
T ss_dssp HHTCCE--EECC-CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHB----TTBEECCCCCCCEEEEEECSCSCHH
T ss_pred hcCCcE--EEEc-CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhc----CCcCcccccccceEEEEeCCCCCHH
Confidence 667654 2222 34454555653 57899999999887654322221 1233333 35444444 4458999
Q ss_pred HHHHHHHHHHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCC
Q 009407 301 ATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGA 380 (535)
Q Consensus 301 ~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 380 (535)
..+..++.-+=+... +. .+++..+ .+|.+++.+++.+.--.-| .. +.++.+..
T Consensus 257 ~vAaDLlsQAEHd~~----a~-~iLvT~s-~~la~~V~~~i~~~l~~l~-----------r~-------~i~~~sl~--- 309 (423)
T 4gic_A 257 WIAMDLFSQAEHDED----AQ-AILISPD-AAHLEAVQASIERLLPGME-----------RA-------EVIRTSLE--- 309 (423)
T ss_dssp HHHHHHHHHHTTCTT----CE-EEEEESC-HHHHHHHHHHHHHHGGGCT-----------TH-------HHHHHHHH---
T ss_pred HHHHHHHHhhccCCC----Ce-EEEEeCc-HHHHHHHHHHHHHHHhhCc-----------cH-------HHHHHHHh---
Confidence 988888766554332 22 3445444 4556655555542110000 00 11111111
Q ss_pred EEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHH
Q 009407 381 RLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARK 460 (535)
Q Consensus 381 ~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~ 460 (535)
-+| .++.++|++|+++++|..-.- -.-|.++|+. .
T Consensus 310 --------------------------------------~~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~ 344 (423)
T 4gic_A 310 --------------------------------------RRG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---V 344 (423)
T ss_dssp --------------------------------------HHC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---H
T ss_pred --------------------------------------cCc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---H
Confidence 011 356688999999999996444 3677889965 5
Q ss_pred HHhhcc-eeEEEEcCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEE
Q 009407 461 FQTEIE-AGQVGINVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513 (535)
Q Consensus 461 ~~~~l~-~G~V~iN~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v 513 (535)
+..+++ +|.|++..+++ ..++-+|-+|.- ++.+..++..|+...++
T Consensus 345 ~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLPT~G~A-------r~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 345 LVESIRNAGAIFMGRYTAEALGDYCAGPNHVLPTSGTA-------RFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp HGGGCCCCSEEEEC----------------CCCCTTGG-------GTCCCCCGGGGEEEEEE
T ss_pred HHhhCcEeceeecCCCCchhhhhcCcCCCccCCCCCcc-------cccCCCCHHHeeeeeeE
Confidence 777776 89999976542 123457776643 22333347888876554
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.35 Score=49.30 Aligned_cols=259 Identities=14% Similarity=0.098 Sum_probs=150.4
Q ss_pred CceeeeeeccCceEEeecCC---CcchhhHhhhhhhhhhcCCeeeec--CCCCChHHHHHHHHHHHHcCCCcCceecccC
Q 009407 167 GIDTYSLREPLGVCAGICPF---NFPAMIPLWMFPVAVTCGNTFVLK--PSEKDPGASIMLAELAMEAGLPDGVLNIVHG 241 (535)
Q Consensus 167 ~~~~~~~~~P~GVv~~I~p~---N~P~~~~~~~l~~ALaaGN~VVlK--ps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g 241 (535)
|.....++.|+--|++..|. -||.. ++...+||-.+|+.=|+- |....|. +.-....+|+.+ |--+ |
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e--Iy~v-G 185 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD--VFNV-G 185 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE--EEEC-C
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE--Eeec-c
Confidence 66677788999999999997 46644 444578999999876544 4322222 223335667664 2222 4
Q ss_pred ChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeC-CCcceeee--CCCCCHHHHHHHHHHHHhhcc
Q 009407 242 THDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQSNM-GAKNHGIV--LPDANMDATLNALAAAGFGAA 314 (535)
Q Consensus 242 ~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lel-gG~~p~iV--~~dAdl~~Aa~~iv~~~~~~~ 314 (535)
+.+...+|.- -|.||.|+=.|..-+..+=..-... ...|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~-~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR-LDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC-TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh-cCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 4444455552 4889999988887654322211111 12233333 35554444 445899988888776655433
Q ss_pred CCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC
Q 009407 315 GQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394 (535)
Q Consensus 315 GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~ 394 (535)
.+. .+++..+ +++.+++.+++++.--.-| . .+.++
T Consensus 265 ----~a~-aiLvT~s-~~la~~V~~ev~~ql~~lp-----------r-------~~ia~--------------------- 299 (434)
T 1kae_A 265 ----DSQ-VILLTPA-ADMARRVAEAVERQLAELP-----------R-------AETAR--------------------- 299 (434)
T ss_dssp ----TCE-EEEEESC-HHHHHHHHHHHHHHHTTCT-----------T-------HHHHH---------------------
T ss_pred ----CCc-EEEEECC-HHHHHHHHHHHHHHHHhCC-----------h-------HHHHH---------------------
Confidence 232 3444443 4455555554432110000 0 00111
Q ss_pred CCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcc-eeEEEEc
Q 009407 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIE-AGQVGIN 473 (535)
Q Consensus 395 ~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~-~G~V~iN 473 (535)
+.+..- .++-++|++||++++|..-.= -.-|.++|+. .+..+++ +|.|++.
T Consensus 300 -----------------------~sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG 351 (434)
T 1kae_A 300 -----------------------QALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLG 351 (434)
T ss_dssp -----------------------HHHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEES
T ss_pred -----------------------HHHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcC
Confidence 111122 467789999999999996544 3678899964 6677776 8999998
Q ss_pred CCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 474 VPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 474 ~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
.+++ ..++-+|-+|.- ++.|..+++.|+...++.
T Consensus 352 ~~tpe~~GDY~aG~NHvLPT~G~A-------R~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 352 DWSPESAGDYASGTNHVLPTYGYT-------ATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp TTCCHHHHHHTSSSCCCCCCTTGG-------GTCCCSCGGGGEEEEEEE
T ss_pred CCCchhhcccccCCCcccCCCCce-------eccCCCcHHhccceeeEE
Confidence 7643 235568877654 223334478888766553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 535 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-135 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-134 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-133 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-109 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-100 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 5e-98 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-87 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 9e-81 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-46 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-37 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 3e-21 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 398 bits (1024), Expect = e-135
Identities = 153/493 (31%), Positives = 236/493 (47%), Gaps = 21/493 (4%)
Query: 38 PPRVPNL------IGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF 91
P + P + I + ++ S + +NP+T EV+ Q+ E+ AV AA+ AF
Sbjct: 5 PNQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAF 64
Query: 92 ---PSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKD-AQGDVFRGLEVVE 147
WR + R R++ +L +LI RD LA T + GK D+ L+ +
Sbjct: 65 QLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLR 124
Query: 148 HSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTF 207
+ G A G+ +P + +Y+ EP+GVC I P+NFP ++ W A+ GN
Sbjct: 125 YYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVV 183
Query: 208 VLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVA 266
V+K +E+ P ++ +A L EAG P GV+NIV G T AI ++ ++F GS
Sbjct: 184 VMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEI 243
Query: 267 GMHIYARASAK-GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVV 325
G I A + KRV +G K+ I++ DA+MD + A F GQ A S
Sbjct: 244 GRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTF 303
Query: 326 FVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLL 384
D + ++ V RAK+ V ++ + GP + + ++I I +G + GA+LL
Sbjct: 304 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 363
Query: 385 DGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQY 444
G + G FI PT+ DV M KEEIFGPV+ ++ ++EE + N + Y
Sbjct: 364 GGG----IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTY 419
Query: 445 GNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGV 504
G AA+FT A ++AG V +N V F G K S +G G+ G+
Sbjct: 420 GLAAAVFTKDLDKANYLSQALQAGTVWVNC-YDVFGAQSPFGGYKMSGSGR--ELGEYGL 476
Query: 505 NFYTQIKTVTQQW 517
YT++KTVT +
Sbjct: 477 QAYTEVKTVTVKV 489
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 396 bits (1018), Expect = e-134
Identities = 166/484 (34%), Positives = 237/484 (48%), Gaps = 17/484 (3%)
Query: 44 LIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAF---PSWRNTPIT 100
I + S S + V NPAT+E + ++ E+ AV AA+QAF WR +
Sbjct: 17 FINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDAS 76
Query: 101 TRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKD-AQGDVFRGLEVVEHSCGMATLQMGE 159
R R++ KL +LI RD LA GK + D+ ++ + + G A G
Sbjct: 77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGR 136
Query: 160 YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGAS 219
+P + TY+ EP+GVC I P+NFP ++ LW A++CGNT V+KP+E+ P +
Sbjct: 137 TIP-MDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTA 195
Query: 220 IMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAK- 277
+ + L EAG P GV+NIV G T AI ++ ++F GS G I A
Sbjct: 196 LHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSN 255
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWE--D 335
KRV +G K+ IV DA++D + F GQ C ++ +FV +S E
Sbjct: 256 LKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQ-CCIAASRLFVEESIYDEFVR 314
Query: 336 KLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYE 395
+ VERAK + GP I K+ E+I LI+SG + GA+L G P
Sbjct: 315 RSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG----PWGN 370
Query: 396 HGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSG 455
G FI PT+ +DVT DM KEEIFGPV M+ SL++ IK N YG A IFT+
Sbjct: 371 KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDI 430
Query: 456 AAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515
A + +++G V +N V F G K S G+ G+ G + YT++KTVT
Sbjct: 431 DKAITVSSALQSGTVWVNC-YSVVSAQCPFGGFKMS--GNGRELGEYGFHEYTEVKTVTI 487
Query: 516 QWRD 519
+
Sbjct: 488 KISQ 491
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 395 bits (1016), Expect = e-133
Identities = 150/485 (30%), Positives = 237/485 (48%), Gaps = 12/485 (2%)
Query: 43 NLIGGAFIESRSSEYID-VINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITT 101
N GG I+S+ + V PAT V+ Q+ EE AV +A+ A+ W
Sbjct: 22 NYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIE 81
Query: 102 RQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYV 161
R RVML+ +IR D +A GKT+ +A+ D+ + +E+ G+ +
Sbjct: 82 RSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGL-APTLSGQH 140
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
+ G Y+ REPLGVCAGI +N+P MI W A+ CGN V KPS P ++
Sbjct: 141 IQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVI 200
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRV 281
LAE+ EAG+P G++N+V G +T + +C N+ +SF GS G + ++ K V
Sbjct: 201 LAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHV 260
Query: 282 QSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCM-ALSTVVFVGDSKSWEDKLVER 340
+G K+ ++ D ++ + A F GQ C V + +++V+R
Sbjct: 261 TLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKR 320
Query: 341 AKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVV--PGYEHGN 398
KA+ V + +G +ISK +++ + + GAR+L G + P ++G
Sbjct: 321 TKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGY 380
Query: 399 FIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458
F+ P +L + DM C KEEIFGPV+ + D+ EE ++ N +G + +FT + A
Sbjct: 381 FMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRA 440
Query: 459 RKFQTEIEAGQVGINVPI--PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516
+ +EAG IN PV +P F G K S G G+A V++Y+Q+KTV +
Sbjct: 441 HRVAANLEAGTCYINTYSISPVEVP---FGGYKMSGFGR--ENGQATVDYYSQLKTVIVE 495
Query: 517 WRDLP 521
D+
Sbjct: 496 MGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 332 bits (851), Expect = e-109
Identities = 132/475 (27%), Positives = 206/475 (43%), Gaps = 11/475 (2%)
Query: 43 NLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTR 102
LI G + E V NPAT +V+ ++ + E+ AAV AA AF W T R
Sbjct: 5 LLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVR 63
Query: 103 QRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMG-EYV 161
+LKL ++I + A + GK L A D + V A +
Sbjct: 64 AECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA 123
Query: 162 PNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIM 221
G + R+PLGV A I P+N+P M+ W A+ GN VLKPSE P ++
Sbjct: 124 GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALK 183
Query: 222 LAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHIYARASAKGKR 280
LAELA + P GV+NI+ G TV + + +R +S GS G HI + ++ KR
Sbjct: 184 LAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKR 242
Query: 281 VQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQR-CMALSTVVFVGDSKSWEDKLVE 339
+G K IV DA+++A + + G+ AGQ A G + +KL
Sbjct: 243 THMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGA 302
Query: 340 RAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNF 399
LK A + +LGP+ S ER+ + ++ +G ++ G +G +
Sbjct: 303 AVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE---KRKGNGYY 359
Query: 400 IGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAAR 459
PT+L D ++E+FGPV+ D+ E+ + N +QYG ++++T A
Sbjct: 360 YAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAH 419
Query: 460 KFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514
+ ++ G +N + G K S G G+ YT ++ V
Sbjct: 420 RVSARLQYGCTWVNTHFMLV-SEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 309 bits (792), Expect = e-100
Identities = 136/481 (28%), Positives = 215/481 (44%), Gaps = 19/481 (3%)
Query: 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPI 99
+ N + G + S I + PA+ + +P + EE ++AK+A P+WR
Sbjct: 3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 60
Query: 100 TTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMA-----T 154
R + K+ +++ RD +K+ ++ E K K A +V R E++ ++
Sbjct: 61 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 120
Query: 155 LQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEK 214
+ G S REP+G+ I PFN+P + A+ GN KP +
Sbjct: 121 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 180
Query: 215 DPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYAR 273
+ ++LAE EAGLP GV N + G + + I + + I+F GS G I
Sbjct: 181 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240
Query: 274 ASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSW 333
A + + +G K+ IVL DA+++ T + A FG +GQRC A+ V+ +
Sbjct: 241 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 298
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
+ + E DAD+ P+I ++ + + LI + GA +
Sbjct: 299 LVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAT-------ALTEI 351
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
GN I P + VT DM EE FGPVL ++ S+EEAI+I NK++YG A+IFT+
Sbjct: 352 KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 411
Query: 454 SGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTV 513
A ++E G V IN F F G+K S AG K + T +K+V
Sbjct: 412 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQG--VKYSIEAMTTVKSV 469
Query: 514 T 514
Sbjct: 470 V 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 304 bits (779), Expect = 5e-98
Identities = 140/495 (28%), Positives = 222/495 (44%), Gaps = 20/495 (4%)
Query: 34 KQHNPPRVPNLIGGAFIESRSSEYIDVINP-ATQEVVSQLPLTTNEEFKAAVSAAKQAFP 92
++ P IGG ++++ E + +NP A EVV E +AA+ AA +AF
Sbjct: 31 REEFGRHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88
Query: 93 SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGM 152
+W++ P R R++LK L+RR +L + E GK +A DV ++ +E+
Sbjct: 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARA 148
Query: 153 A-TLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKP 211
A + G D S PLG I P+NFP I M V GNT + KP
Sbjct: 149 ALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKP 208
Query: 212 SEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTV-NAICDDANIRAISFVGSNVAGMHI 270
+E + E+ EAG P GV+N + G + V + + IR I+F GS G+ I
Sbjct: 209 AEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKI 268
Query: 271 YARA------SAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV 324
Y A KR G KN IV A+ D + + +G GQ+C A S +
Sbjct: 269 YEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRL 328
Query: 325 VFV-GDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+ G + +++++RA+ L V E + DLGPV+S + + ++ I+ G G L+
Sbjct: 329 ILTQGAYEPVLERVLKRAERLSVGPAEE-NPDLGPVVSAEQERKVLSYIEIGKNEGQ-LV 386
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
L G+ + GY FI PT+ T+V +EEIFGPVL ++ EA+++ N
Sbjct: 387 LGGKRLEGEGY----FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTP 442
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKA 502
YG +++ + E G + N I + F G K S
Sbjct: 443 YGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNA-KTGALD 501
Query: 503 GVNFYTQIKTVTQQW 517
+ + ++K V +++
Sbjct: 502 YLRLFLEMKAVAERF 516
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 276 bits (705), Expect = 2e-87
Identities = 123/498 (24%), Positives = 214/498 (42%), Gaps = 15/498 (3%)
Query: 30 KLYSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQ 89
+ ++ P P+ + G + S + I+V +P ++++ + EE + + +
Sbjct: 6 GVIKEKGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFK 63
Query: 90 AFP-SWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEH 148
S R+ P T R V+ K ++I R++D A + GK A G+V ++ +
Sbjct: 64 RGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRL 123
Query: 149 SCGMATLQMGEYVPNV----SNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCG 204
+ G+Y+P + + REPLGV A I PFN+P + + G
Sbjct: 124 AELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYG 183
Query: 205 NTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSN 264
N V+KPS DP + M + ++AG P + +++ I D + A+SF GS
Sbjct: 184 NAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGST 243
Query: 265 VAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTV 324
G + K + +G + IVL DA++D + +A + AGQRC A+ V
Sbjct: 244 EVGERVVKVGGVK--QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLV 301
Query: 325 VFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLL 383
+ +++ +R +L+V + D+GP+IS A + + I+ +E G R+L
Sbjct: 302 LAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVL 361
Query: 384 LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQ 443
GR + + P DM YK E+F PV ++ L++AI++ N
Sbjct: 362 AGGRRLGPTYVQPTLVEAPADRVK---DMVLYKREVFAPVASAVEVKDLDQAIELANGRP 418
Query: 444 YGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAG 503
YG AA+F R+ +E G + IN + ++ F G K S
Sbjct: 419 YGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGYA 476
Query: 504 VNFYTQIKTVTQQWRDLP 521
V T KT+ ++
Sbjct: 477 VEAVTAYKTIVFNYKGKG 494
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 257 bits (657), Expect = 9e-81
Identities = 98/441 (22%), Positives = 183/441 (41%), Gaps = 19/441 (4%)
Query: 83 AVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDA-QGDVFR 141
V A++AF S + + R + + LQ +I ++ ++ + ++ GK + +V
Sbjct: 5 TVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAH 64
Query: 142 GLEVVEHSCGMATLQMGEY---VPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198
LE ++ + + + D Y EPLGV I +N+P + +
Sbjct: 65 VLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMV 124
Query: 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAI 258
AV GN +LKPSE + +LA L + + L + G +T + + I
Sbjct: 125 GAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKE--RFDHI 182
Query: 259 SFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRC 318
+ GS G + A A+ V +G K+ V D ++D +A F +GQ C
Sbjct: 183 MYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTC 242
Query: 319 MALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378
+A ++ ++ + ++++ + D G +I+ + +R+ LI + +
Sbjct: 243 VAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA 302
Query: 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKI 438
+I PTIL DV +EEIFGPV+ + SLEEAI+
Sbjct: 303 HGGTWDQS----------SRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQF 352
Query: 439 VNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGIN-VPIPVPLPFFSFTGSKASFAGDLN 497
+N+ + +F+++ +K E +G V N V + + +P F G S G
Sbjct: 353 INQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGA-- 410
Query: 498 FYGKAGVNFYTQIKTVTQQWR 518
++GK ++ ++ +
Sbjct: 411 YHGKKSFETFSHRRSCLVKSL 431
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 167 bits (423), Expect = 2e-46
Identities = 68/500 (13%), Positives = 142/500 (28%), Gaps = 48/500 (9%)
Query: 54 SSEYIDVINPATQEVV-SQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQEL 112
+ N T E + P+ T E A +AA + +R + R ++ +
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 113 IRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSN------ 166
+ D + E G++ R + + +
Sbjct: 61 LEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP 120
Query: 167 --GIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVA--VTCGNTFVLKPSEKDPGASIML 222
D + LG A NFP A + G ++K PG S ++
Sbjct: 121 LPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180
Query: 223 A----ELAMEAGLPDGVLNIVHGTHDTVNAIC-DDANIRAISFVGSNVAGMHIYARASAK 277
A + + LP + ++ G + I+A+ F GS G ++ A +
Sbjct: 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240
Query: 278 GKRVQSNMGAKNHGIVLPDANMDATL----NALAAAGFGAAGQRCMALSTVVFVGDSKSW 333
+ + + + A+ GQ C V + +
Sbjct: 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFAL---NTP 297
Query: 334 EDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPG 393
E + + + + + + + R GI+
Sbjct: 298 ETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGID---------VTFSQAE 348
Query: 394 YEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453
++ ++EEIFGP L + +++ + + + A I +
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHAT 408
Query: 454 SG--AAARKFQTEIE--AGQVGIN-----VPIPVPLPFFS-FTGSKASFAGDLNFYGKAG 503
+ +E AG++ N V + + + S S + G
Sbjct: 409 EEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS---VGAEA 465
Query: 504 VNFYTQIKTVTQQWRD--LP 521
++ + + Q + LP
Sbjct: 466 IHRWLRPVAY-QALPESLLP 484
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 140 bits (353), Expect = 3e-37
Identities = 61/457 (13%), Positives = 130/457 (28%), Gaps = 69/457 (15%)
Query: 78 EEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQG 137
+E ++A+ RN + + + K+ E + ++ + K +
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 138 DVFRG------------LEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICP 185
+ ++ E G+ V + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRV-PIGPIGII 119
Query: 186 FNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDT 245
+ + + +A+ GNT +L+ ++ + EA + +
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 246 VN--AICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVL-PDANMDAT 302
+ + + +R + G + + G N I + A++
Sbjct: 180 TDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKA 239
Query: 303 LNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISK 362
+ + A G A +V +K + +VE + V
Sbjct: 240 VPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE--------------- 284
Query: 363 QAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGP 422
V G E I P + V A + + E
Sbjct: 285 ----------------------------VRGCEKTREIVPDV---VPATEDDWPTEYLDL 313
Query: 423 VLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPV---- 478
++ +++EAI+ + K G+ +I T + + A+KF +EI+A V +N
Sbjct: 314 IIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGG 373
Query: 479 PLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515
F + G + G G+ T K V
Sbjct: 374 QFGFGAEIGIS---TQRFHARGPVGLRELTTYKFVVL 407
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 94.1 bits (233), Expect = 3e-21
Identities = 53/420 (12%), Positives = 116/420 (27%), Gaps = 64/420 (15%)
Query: 81 KAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKL----AMNITTEQGKTLKDAQ 136
+ A++A + R ++ K+ + ++ + + +++ + L D+
Sbjct: 6 QQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSL 65
Query: 137 GDVFRGLE-------------VVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGI 183
+ V E + ++M + + + L
Sbjct: 66 LKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLL----- 120
Query: 184 CPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAM--------EAGLPDGV 235
F + + +++ GN +LK ++ +A++ E G+P G
Sbjct: 121 VIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGS 180
Query: 236 LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295
+ ++ D + + D I + GSN I V + +
Sbjct: 181 VQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 237
Query: 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADAD 355
DA++ A +
Sbjct: 238 DADLIKAKRISLDAKTNYPAGCNA-------METLLINPK-------------------- 270
Query: 356 LGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECY 415
SK + ++ G+ A L T + + +
Sbjct: 271 ----FSKWWEVLENLTLEGGVTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDF 326
Query: 416 KEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVP 475
+E L S E AI+ +N + + AI T + A A KF +++ V N
Sbjct: 327 DKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS 386
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.83 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=5.3e-104 Score=849.61 Aligned_cols=477 Identities=34% Similarity=0.488 Sum_probs=449.1
Q ss_pred cCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHH
Q 009407 35 QHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQE 111 (535)
Q Consensus 35 ~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~ 111 (535)
...+...++||||+|+++.++++++++||+||+++++++.++.+|++.|+++|++||+ .|++++.++|.++|+++++
T Consensus 8 ~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~ 87 (494)
T d1bxsa_ 8 NLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLAD 87 (494)
T ss_dssp SCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHH
T ss_pred CCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHH
Confidence 3445556899999999988889999999999999999999999999999999999996 6999999999999999999
Q ss_pred HHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcch
Q 009407 112 LIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPA 190 (535)
Q Consensus 112 ~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~ 190 (535)
.|++++++|++++++|+|||..++. .|+...++.+++++.......++..+ ...+...++.++|+|||++|+|||||+
T Consensus 88 ~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~ 166 (494)
T d1bxsa_ 88 LIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIP-MDGNFFTYTRSEPVGVCGQIIPWNFPL 166 (494)
T ss_dssp HHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHH
T ss_pred HHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeec-CCCCceeEEEEccEEEEEEEeCccchh
Confidence 9999999999999999999999864 68899999999999888877766655 445677889999999999999999999
Q ss_pred hhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHH
Q 009407 191 MIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMH 269 (535)
Q Consensus 191 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~ 269 (535)
.++++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+.+|+.
T Consensus 167 ~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 167 LMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999995 568899999999999999999999999
Q ss_pred HHHHHhc-CCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccccc
Q 009407 270 IYARASA-KGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVN 347 (535)
Q Consensus 270 i~~~a~~-~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG 347 (535)
|++.++. +++|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++||||+++ +|+|+++|+++++++++|
T Consensus 247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~~g 326 (494)
T d1bxsa_ 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326 (494)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBS
T ss_pred HHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhheeee
Confidence 9998875 68999999999999999999999999999999999999999999999988877 899999999999999999
Q ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEe
Q 009407 348 AGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCM 427 (535)
Q Consensus 348 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~ 427 (535)
+|.++++++||++++.+++++.++|++|+++||++++||.... ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 327 ~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~ 402 (494)
T d1bxsa_ 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG----NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIM 402 (494)
T ss_dssp CTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEEC----SSSCEECCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred ccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccC----CCceeEcCEEEeCCCCCcHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999997643 479999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 428 QADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 428 ~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
+|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+| +++|.+|+++|
T Consensus 403 ~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~PfGG~~~SG~G--~~~g~~~~~~f 479 (494)
T d1bxsa_ 403 KFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV-VSAQCPFGGFKMSGNG--RELGEYGFHEY 479 (494)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC-CCTTSCBCCSGGGEES--CBSHHHHHHTT
T ss_pred EECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCC-cCCCCCcCccccccCC--hhhHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998754 3478999999999999 57999999999
Q ss_pred hheeEEEeccCC
Q 009407 508 TQIKTVTQQWRD 519 (535)
Q Consensus 508 t~~k~v~~~~~~ 519 (535)
|+.|+|++++.+
T Consensus 480 t~~k~i~~~~~~ 491 (494)
T d1bxsa_ 480 TEVKTVTIKISQ 491 (494)
T ss_dssp EEEEEEEEECSC
T ss_pred cceEEEEEecCC
Confidence 999999998864
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=4.4e-103 Score=842.05 Aligned_cols=473 Identities=32% Similarity=0.461 Sum_probs=446.7
Q ss_pred CCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch---hccCCCHHHHHHHHHHHHHHHH
Q 009407 38 PPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP---SWRNTPITTRQRVMLKLQELIR 114 (535)
Q Consensus 38 ~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~ 114 (535)
....++||||+|+++.++++++++||+||+++++++.++.+|+++|+++|++||+ .|++++.++|.++|+++++.|+
T Consensus 11 ~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~ 90 (494)
T d1o04a_ 11 VFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 4456789999999988889999999999999999999999999999999999985 6999999999999999999999
Q ss_pred hcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhH
Q 009407 115 RDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193 (535)
Q Consensus 115 ~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 193 (535)
+++++|++++++|+|||..++. .|+..+++.+++++.......++..+ ...+...++.++|+|||++|+|||||+.++
T Consensus 91 ~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~ 169 (494)
T d1o04a_ 91 RDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-IDGDFFSYTRHEPVGVCGQIIPWNFPLLMQ 169 (494)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-CSSSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred HhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEecccEEEEECCcccHHHHH
Confidence 9999999999999999999985 59999999999999888877766655 445667888999999999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+|+.|.||||+++|+.|++
T Consensus 170 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~~i~~ 249 (494)
T d1o04a_ 170 AWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQV 249 (494)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999995 578999999999999999999999999998
Q ss_pred HHh-cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCC
Q 009407 273 RAS-AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGT 350 (535)
Q Consensus 273 ~a~-~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~ 350 (535)
.++ ++++|+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|+||+++ +|+|+++|.++++++++|+|.
T Consensus 250 ~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~ 329 (494)
T d1o04a_ 250 AAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPF 329 (494)
T ss_dssp HHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTT
T ss_pred HhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheeecCcc
Confidence 775 689999999999999999999999999999999999999999999999988888 899999999999999999999
Q ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecC
Q 009407 351 EADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQAD 430 (535)
Q Consensus 351 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~ 430 (535)
++++++|||+++.+++++.++|++|+++|+++++||.... +.|+|++|||+.++++++++++||+||||++|++|+
T Consensus 330 ~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~ 405 (494)
T d1o04a_ 330 DSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAA----DRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405 (494)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCC----SSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC----CCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeC
Confidence 9999999999999999999999999999999999997643 478999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhe
Q 009407 431 SLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQI 510 (535)
Q Consensus 431 ~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~ 510 (535)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|.+||++||+.
T Consensus 406 ~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~~~SG~G--~~~g~~~~~~ft~~ 482 (494)
T d1o04a_ 406 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVF-GAQSPFGGYKMSGSG--RELGEYGLQAYTEV 482 (494)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCC-CTTSCBCCSGGGEES--CBSTGGGGGGGEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCC-CCCCCcCCcccccCC--chhHHHHHHHhcCe
Confidence 999999999999999999999999999999999999999999987543 468999999999999 57999999999999
Q ss_pred eEEEeccC
Q 009407 511 KTVTQQWR 518 (535)
Q Consensus 511 k~v~~~~~ 518 (535)
|+|+++|+
T Consensus 483 k~v~~~~p 490 (494)
T d1o04a_ 483 KTVTVKVP 490 (494)
T ss_dssp EEEEEECS
T ss_pred EEEEEeCC
Confidence 99999885
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=9.7e-103 Score=840.14 Aligned_cols=477 Identities=31% Similarity=0.513 Sum_probs=449.4
Q ss_pred CCCceecCeeeeCCCCCeE-EeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 40 RVPNLIGGAFIESRSSEYI-DVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~-~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
...+||||+|+++.++.++ +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|.++|+++++.|+++++
T Consensus 19 ~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~e 98 (503)
T d1a4sa_ 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRD 98 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 3457999999998776665 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
+|++++++|+|||+.+++.|+..+++.+++++.......+.... ...+...++.++|+|||++|+|||||+...+++++
T Consensus 99 ela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~ 177 (503)
T d1a4sa_ 99 NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ-LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCA 177 (503)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEE-CGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccc-cCCCcccccccccceeeecccCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999887766654443 34566788999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
+||++||+||+|||+.+|.++.++++++.++|+|+|++|+|+|+.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 178 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 257 (503)
T d1a4sa_ 178 PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcC
Q 009407 279 KRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLG 357 (535)
Q Consensus 279 ~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~G 357 (535)
+|+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +++|++++.+.++++++|+|.++.+++|
T Consensus 258 ~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~g 337 (503)
T d1a4sa_ 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG 337 (503)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccc
Confidence 999999999999999999999999999999999999999999999988888 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCC--CCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 358 PVISKQAKERICRLIQSGIESGARLLLDGRNIVVP--GYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 358 pli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~--~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
|++++.+++++++++++++++||++++||...... ....|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 p~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 417 (503)
T d1a4sa_ 338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417 (503)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHH
Confidence 99999999999999999999999999999754321 2357899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||++||||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+| +++|.+|+++||+.|+|++
T Consensus 418 i~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~~l~~~t~~k~v~~ 494 (503)
T d1a4sa_ 418 LQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSIS-PVEVPFGGYKMSGFG--RENGQATVDYYSQLKTVIV 494 (503)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSTTGGGGGSEEEEEEEE
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCC-CCCCCccCcccCcCC--cchHHHHHHHhhCeEEEEE
Confidence 9999999999999999999999999999999999999997654 468999999999999 5789999999999999999
Q ss_pred ccCCC
Q 009407 516 QWRDL 520 (535)
Q Consensus 516 ~~~~~ 520 (535)
++.+.
T Consensus 495 ~~~~~ 499 (503)
T d1a4sa_ 495 EMGDV 499 (503)
T ss_dssp CCSCC
T ss_pred cCCCC
Confidence 88543
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-100 Score=819.36 Aligned_cols=469 Identities=28% Similarity=0.434 Sum_probs=431.5
Q ss_pred CCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHH
Q 009407 40 RVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDK 119 (535)
Q Consensus 40 ~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 119 (535)
.+++||||+|+.+ ++++++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 3578999999976 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCChHHhhh-hHHHHHHHHHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhh
Q 009407 120 LAMNITTEQGKTLKDAQG-DVFRGLEVVEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFP 198 (535)
Q Consensus 120 l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~ 198 (535)
|+++++.|+|||+.++.. ++..+...+++++...........+....+...+++++|+|||++|+|||||+.+.+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a 160 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 160 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHH
Confidence 999999999999999965 4555556666655554433332222234567788999999999999999999999999999
Q ss_pred hhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcC
Q 009407 199 VAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAK 277 (535)
Q Consensus 199 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~ 277 (535)
+||++||+||+|||+.+|.++..++++++++ +|+|++|+|+|+ .+.++.|++||+|++|.||||+++|+.|++.++.+
T Consensus 161 ~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~ 239 (474)
T d1wnda_ 161 PALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 239 (474)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcC
Confidence 9999999999999999999999999999764 999999999995 57899999999999999999999999999999999
Q ss_pred CCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCc
Q 009407 278 GKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADL 356 (535)
Q Consensus 278 ~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~ 356 (535)
+||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|++|+++ +|+|+++|+++++++++|+|.++++++
T Consensus 240 ~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~ 319 (474)
T d1wnda_ 240 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTEL 319 (474)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCB
T ss_pred CCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCcee
Confidence 9999999999999999999999999999999999999999999999988888 899999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEE-eccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHH
Q 009407 357 GPVISKQAKERICRLIQSGIESGARLL-LDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEA 435 (535)
Q Consensus 357 Gpli~~~~~~~~~~~i~~a~~~Ga~v~-~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~ea 435 (535)
||++++.+.+++.+++++++.+|+..+ .|+.... +.|+|+.|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~----~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~dea 395 (474)
T d1wnda_ 320 GPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK----GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 395 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS----SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cccccccccchHHHHHHHHHHCCCeEEEeCCcccC----CCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHH
Confidence 999999999999999999999998654 4544322 57899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 436 IKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 436 i~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|+++|+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|.+|+++||+.|+|++
T Consensus 396 i~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~-~~~~PfGG~k~SG~G--~~~g~~gl~~~t~~k~v~i 472 (474)
T d1wnda_ 396 VNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFML-VSEMPHGGQKLSGYG--KDMSLYGLEDYTVVRHVMV 472 (474)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCC-CTTSCBCCSGGGEEC--CBSHHHHHHTTEEEEEEEE
T ss_pred HHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCc-cCCCCcccccccccC--ccCHHHHHHHcCCEEEEEE
Confidence 9999999999999999999999999999999999999998644 578999999999999 5799999999999999998
Q ss_pred cc
Q 009407 516 QW 517 (535)
Q Consensus 516 ~~ 517 (535)
+|
T Consensus 473 ~~ 474 (474)
T d1wnda_ 473 KH 474 (474)
T ss_dssp EC
T ss_pred eC
Confidence 75
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.6e-98 Score=810.69 Aligned_cols=470 Identities=29% Similarity=0.450 Sum_probs=434.4
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCC-CCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPA-TQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDI 117 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 117 (535)
+++++||||+|+.+ ++.++++||. ||+++++++.++.+|+++|+++|++||+.|+++|.++|.++|+++++.|++++
T Consensus 36 ~~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~ 113 (516)
T d1uzba_ 36 RHYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp EEECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred CCCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 56789999999975 4579999996 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc-CCCCCceeeeeeccCceEEeecCCCcchhhHhhh
Q 009407 118 DKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP-NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWM 196 (535)
Q Consensus 118 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 196 (535)
++|+++++.|+|||..+++.|+.++++.+++++.......+.... ....+...+.+++|+|||++|+|||||+.+++++
T Consensus 114 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~ 193 (516)
T d1uzba_ 114 RELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGM 193 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCcccccccccccccccccc
Confidence 999999999999999999999999999999999877766543222 1234566788899999999999999999999999
Q ss_pred hhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHh
Q 009407 197 FPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARAS 275 (535)
Q Consensus 197 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~ 275 (535)
+++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+| +.+.++.|+.||+|++|.||||+.+|+.|++.++
T Consensus 194 ~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa 273 (516)
T d1uzba_ 194 IVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAG 273 (516)
T ss_dssp HHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHT
T ss_pred ccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 4678999999999999999999999999999887
Q ss_pred ------cCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccC
Q 009407 276 ------AKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNA 348 (535)
Q Consensus 276 ------~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~ 348 (535)
.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+||+++ +|+|+++++++++++++|
T Consensus 274 ~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g- 352 (516)
T d1uzba_ 274 RLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG- 352 (516)
T ss_dssp SCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-
T ss_pred hcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-
Confidence 678999999999999999999999999999999999999999999999988877 899999999999999999
Q ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEee
Q 009407 349 GTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQ 428 (535)
Q Consensus 349 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~ 428 (535)
|.++++++||++++.+++++.++|++|+++|+.+ +||+..+ ..|+|+.|||+.++++++++++||+||||++|++
T Consensus 353 ~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~----~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~ 427 (516)
T d1uzba_ 353 PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLE----GEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIR 427 (516)
T ss_dssp CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCS----SSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEE
T ss_pred CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCC----CCCceECCEEEecCCCCchhhcCCCcCceEEEEE
Confidence 6788999999999999999999999999989755 5665543 4699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCC-CCCCCCCccCCCCCCCCCCCcchHHHHHhc
Q 009407 429 ADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIP-VPLPFFSFTGSKASFAGDLNFYGKAGVNFY 507 (535)
Q Consensus 429 ~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~-~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~ 507 (535)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+++. ...+.+||||+|.||+|+. .+|.+|+++|
T Consensus 428 ~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~-~G~~~~l~~~ 506 (516)
T d1uzba_ 428 VKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAK-TGALDYLRLF 506 (516)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCC-BTSHHHHHTT
T ss_pred eCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcc-cchHHHHHHh
Confidence 9999999999999999999999999999999999999999999999753 3457899999999999952 2458999999
Q ss_pred hheeEEEecc
Q 009407 508 TQIKTVTQQW 517 (535)
Q Consensus 508 t~~k~v~~~~ 517 (535)
|+.|+|+.+|
T Consensus 507 ~~~k~v~~r~ 516 (516)
T d1uzba_ 507 LEMKAVAERF 516 (516)
T ss_dssp EEEEEEEEEC
T ss_pred CCeeeEEEcC
Confidence 9999999876
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.1e-93 Score=770.59 Aligned_cols=476 Identities=26% Similarity=0.401 Sum_probs=436.6
Q ss_pred ccccCCCCCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhch-hccCCCHHHHHHHHHHHH
Q 009407 32 YSKQHNPPRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFP-SWRNTPITTRQRVMLKLQ 110 (535)
Q Consensus 32 ~~~~~~~~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~-~w~~~~~~~R~~~L~~~a 110 (535)
|-+...++.+++||||+|+. ++++++++||+||+++++++.++.+|+++|+++|++|++ .|+++|.++|+++|++++
T Consensus 8 ~~~~~~~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a 85 (499)
T d1ky8a_ 8 IKEKGGVPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAA 85 (499)
T ss_dssp SEEETTEEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHH
Confidence 33445567789999999995 468999999999999999999999999999999988877 799999999999999999
Q ss_pred HHHHhcHHHHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCcccc----CCCCCceeeeeeccCceEEeecCC
Q 009407 111 ELIRRDIDKLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGEYVP----NVSNGIDTYSLREPLGVCAGICPF 186 (535)
Q Consensus 111 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~GVv~~I~p~ 186 (535)
+.|++++++|++++++|+|||..+++.|+.++++.+++++...+...+.... ....+...+++|+|+|||++|+||
T Consensus 86 ~~l~~~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~ 165 (499)
T d1ky8a_ 86 DIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPF 165 (499)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccc
Confidence 9999999999999999999999999999999999999998877665543221 122345678899999999999999
Q ss_pred CcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHH
Q 009407 187 NFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVA 266 (535)
Q Consensus 187 N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~ 266 (535)
|||+.++++++++||++||+||+|||+.+|.++..+++++.++|+|+++++++.++++.+..|+.|+.|+.+.||||+.+
T Consensus 166 N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~ 245 (499)
T d1ky8a_ 166 NYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEV 245 (499)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESCHHH
T ss_pred cccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeeccccc
Confidence 99999999999999999999999999999999999999999999999999999998888899999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhccc
Q 009407 267 GMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALK 345 (535)
Q Consensus 267 g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~ 345 (535)
++.+++.++ .+|+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|++||++ +|+|+++|++++++++
T Consensus 246 g~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~ 323 (499)
T d1ky8a_ 246 GERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLR 323 (499)
T ss_dssp HHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred ceEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCc
Confidence 999998775 5899999999999999999999999999999999999999999999988777 8999999999999999
Q ss_pred ccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEE---ecCCCCccccccccccc
Q 009407 346 VNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTIL---TDVTADMECYKEEIFGP 422 (535)
Q Consensus 346 vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl---~~v~~d~~i~~eE~FgP 422 (535)
+|+|.|+++++||++++.+++++++++++|+.+||+++.||.... ..+..++++ .++.+||++++||+|||
T Consensus 324 ~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~------~~~~~~~~~~~~~~~~~d~~~~~eE~FGP 397 (499)
T d1ky8a_ 324 VGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG------PTYVQPTLVEAPADRVKDMVLYKREVFAP 397 (499)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE------TTEECCEEEECCHHHHTTSHHHHSCCCSS
T ss_pred cCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc------ccccccccccccccCCCCChhhhccccCc
Confidence 999999999999999999999999999999999999999987643 233334433 34567999999999999
Q ss_pred ceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHH
Q 009407 423 VLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKA 502 (535)
Q Consensus 423 vl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~ 502 (535)
|++|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||+++....+.+||||+|.||+| +++|.+
T Consensus 398 vl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G--~~~g~~ 475 (499)
T d1ky8a_ 398 VASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVF--REGIGY 475 (499)
T ss_dssp EEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEES--CBSTTT
T ss_pred eEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCC--CCCHHH
Confidence 999999999999999999999999999999999999999999999999999987656678999999999999 579999
Q ss_pred HHHhchheeEEEeccCC
Q 009407 503 GVNFYTQIKTVTQQWRD 519 (535)
Q Consensus 503 gl~~~t~~k~v~~~~~~ 519 (535)
|+++||+.|+|+++|..
T Consensus 476 ~~~~~~~~k~i~~~~~~ 492 (499)
T d1ky8a_ 476 AVEAVTAYKTIVFNYKG 492 (499)
T ss_dssp THHHHEEEEEEEEECTT
T ss_pred HHHHhhCEEEEEEcCCC
Confidence 99999999999998853
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=8.3e-90 Score=737.03 Aligned_cols=465 Identities=30% Similarity=0.449 Sum_probs=430.8
Q ss_pred CCCCceecCeeeeCCCCCeEEeecCCCCCeeEEecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHH
Q 009407 39 PRVPNLIGGAFIESRSSEYIDVINPATQEVVSQLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDID 118 (535)
Q Consensus 39 ~~~~~~I~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 118 (535)
++|++||||+|+.+ +.+++++||+||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|+++++
T Consensus 2 k~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~ 79 (474)
T d1euha_ 2 KQYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKE 79 (474)
T ss_dssp CBCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 56899999999864 4689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCChHHhhhhHHHHHHHHHHHHhhHHHhcCc-----cccCCCCCceeeeeeccCceEEeecCCCcchhhH
Q 009407 119 KLAMNITTEQGKTLKDAQGDVFRGLEVVEHSCGMATLQMGE-----YVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIP 193 (535)
Q Consensus 119 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 193 (535)
+|++++++|+|||..+++.|+...+..++++.......... ..+....+...+++++|+|||++|+|||||+...
T Consensus 80 ~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~ 159 (474)
T d1euha_ 80 KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLA 159 (474)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHH
T ss_pred HHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhh
Confidence 99999999999999999999999999999887665443221 1111234556778899999999999999999999
Q ss_pred hhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHH
Q 009407 194 LWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYA 272 (535)
Q Consensus 194 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 272 (535)
+.++++||++||+||+|||+.+|.++.+++++|.++|+|+|++|+|+|+ .++++.|+.||+|+.|.||||+.+++.+.+
T Consensus 160 ~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~ 239 (474)
T d1euha_ 160 GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239 (474)
T ss_dssp HHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred hhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhh
Confidence 9999999999999999999999999999999999999999999999996 678899999999999999999999999998
Q ss_pred HHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCC
Q 009407 273 RASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTE 351 (535)
Q Consensus 273 ~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~ 351 (535)
.++ .+|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++|+++++ +++|++.++++...++.|++.+
T Consensus 240 ~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~ 317 (474)
T d1euha_ 240 MAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED 317 (474)
T ss_dssp HTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG
T ss_pred hcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCccc
Confidence 875 6899999999999999999999999999999999999999999999988777 8999999999999999999987
Q ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCC
Q 009407 352 ADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADS 431 (535)
Q Consensus 352 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~ 431 (535)
.. +++|++...+.+++.+.+..+...++..+.++. ..|+|++|||+.++++||++++||+||||++|++|+|
T Consensus 318 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 389 (474)
T d1euha_ 318 DA-DITPLIDTKSADYVEGLINDANDKGATALTEIK-------REGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 389 (474)
T ss_dssp TC-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC-------EETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred cc-ccccccchHHHHHHHHHHHhhhcccccccccCC-------CCCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCC
Confidence 54 589999999999999999999998888765443 4689999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcCCCCCCCCCCCccCCCCCCCCCCCcchHHHHHhchhee
Q 009407 432 LEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIK 511 (535)
Q Consensus 432 ~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k 511 (535)
+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+++....+.+||||+|.||+| +++|++|+++||+.|
T Consensus 390 ~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k 467 (474)
T d1euha_ 390 VEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAG--IQGVKYSIEAMTTVK 467 (474)
T ss_dssp HHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEES--CBSHHHHHHHTEEEE
T ss_pred HHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccC--ccCHHHHHHHhCcEE
Confidence 999999999999999999999999999999999999999999987667788999999999999 579999999999999
Q ss_pred EEEecc
Q 009407 512 TVTQQW 517 (535)
Q Consensus 512 ~v~~~~ 517 (535)
+|++++
T Consensus 468 ~v~~~~ 473 (474)
T d1euha_ 468 SVVFDI 473 (474)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998764
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.6e-84 Score=686.27 Aligned_cols=423 Identities=24% Similarity=0.348 Sum_probs=382.6
Q ss_pred HHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhh-hhHHHHHHHHHHHHhhHHHh-c
Q 009407 80 FKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQ-GDVFRGLEVVEHSCGMATLQ-M 157 (535)
Q Consensus 80 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~-~ 157 (535)
|++|+++||+||++|+.+|.++|.++|+++++.|++++++|+++++.|+|||..++. .|+..+++.+++++...... .
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 59999999999887654432 2
Q ss_pred Ccccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHHHHHcCCCcCc
Q 009407 158 GEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAELAMEAGLPDGV 235 (535)
Q Consensus 158 ~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~ 235 (535)
..... ....+...++.|+|+|||++|+|||||++.+++++++||++||+||+|||+.+|.++..+++++.+. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccc
Confidence 22221 1234456788999999999999999999999999999999999999999999999999999998774 99999
Q ss_pred eecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCCCCCHHHHHHHHHHHHhhccC
Q 009407 236 LNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLPDANMDATLNALAAAGFGAAG 315 (535)
Q Consensus 236 v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~dAdl~~Aa~~iv~~~~~~~G 315 (535)
++++.++......+. ++.++.|.||||+.+|+.|++.++++++|+++|||||||+||++|||+|.|++.+++++|.|+|
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~G 239 (446)
T d1ad3a_ 161 YLVVKGGVPETTELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSG 239 (446)
T ss_dssp EEECCCSHHHHHHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTT
T ss_pred cccccccchhhhhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCC
Confidence 999998776666555 5679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCC
Q 009407 316 QRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGY 394 (535)
Q Consensus 316 Q~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~ 394 (535)
|.|++++|||++++ +|+|+++|.++++.+ +|+|.++++++||++++.+.+++..+++.+ +...|+...
T Consensus 240 Q~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~~~----- 308 (446)
T d1ad3a_ 240 QTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGTWD----- 308 (446)
T ss_dssp CCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCCEE-----
T ss_pred CccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hcccceeec-----
Confidence 99999999988777 899999999998887 899999999999999999999999887653 444443322
Q ss_pred CCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhcceeEEEEcC
Q 009407 395 EHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEIEAGQVGINV 474 (535)
Q Consensus 395 ~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~V~iN~ 474 (535)
..+.|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+
T Consensus 309 ~~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~ 388 (446)
T d1ad3a_ 309 QSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTAND 388 (446)
T ss_dssp TTTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESS
T ss_pred CCCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEEecc
Q 009407 475 PI-PVPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQW 517 (535)
Q Consensus 475 ~~-~~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~~ 517 (535)
++ ....+.+||||+|.||+| +++|.+|+++||+.|+|++++
T Consensus 389 ~~~~~~~~~~PfGG~k~SG~G--~~~g~~~l~~ft~~k~v~~~~ 430 (446)
T d1ad3a_ 389 VIVHITVPTLPFGGVGNSGMG--AYHGKKSFETFSHRRSCLVKS 430 (446)
T ss_dssp SSGGGGCTTSCCCCCGGGEEC--CCSTHHHHHHTEEEEEEEECC
T ss_pred CccCCCCCCCCccccccceec--cchHHHHHHHHhceeEEEEcc
Confidence 75 345688999999999999 578999999999999998864
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.6e-80 Score=667.21 Aligned_cols=439 Identities=16% Similarity=0.219 Sum_probs=372.3
Q ss_pred CCeEEeecCCCCCeeE-EecCCCHHHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChH
Q 009407 55 SEYIDVINPATQEVVS-QLPLTTNEEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLK 133 (535)
Q Consensus 55 ~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 133 (535)
+++|+++||+|||.++ +++.++.+|+++|+++|++||++|++++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHhhHHHhcCccc-c-------CCCCCceeeeeeccCceEEeecCCCcchhhHh--hhhhhhhhc
Q 009407 134 DAQGDVFRGLEVVEHSCGMATLQMGEYV-P-------NVSNGIDTYSLREPLGVCAGICPFNFPAMIPL--WMFPVAVTC 203 (535)
Q Consensus 134 ~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~--~~l~~ALaa 203 (535)
+++.|+.++++.++|+++..+....... . ....+...+..++|+|||++|+|||||+.+.+ +++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 9999999999999999987655332211 0 01223456788899999999999999987544 689999999
Q ss_pred CCeeeecCCCCChHHHHHHH----HHHHHcCCCcCceecccCC-hhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCC
Q 009407 204 GNTFVLKPSEKDPGASIMLA----ELAMEAGLPDGVLNIVHGT-HDTVNAICDDANIRAISFVGSNVAGMHIYARASAKG 278 (535)
Q Consensus 204 GN~VVlKps~~~~~~~~~l~----~~l~~aGlP~g~v~vv~g~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~ 278 (535)
||+||+|||+.+|.++.++. +++.++|+|+|++|+|+|+ .++++.|++||+|++|+||||+.+|+.|++.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999987665 4456789999999999994 678899999999999999999999999999999988
Q ss_pred CeE--EEeCCCcceeeeCCCCCHHHHH--HHHHHHHhhccCCCccCcceEEEeCC-h-hHHHHHHHHHHhcccccCCCCC
Q 009407 279 KRV--QSNMGAKNHGIVLPDANMDATL--NALAAAGFGAAGQRCMALSTVVFVGD-S-KSWEDKLVERAKALKVNAGTEA 352 (535)
Q Consensus 279 ~~v--~lelgG~~p~iV~~dAdl~~Aa--~~iv~~~~~~~GQ~C~a~~~vlv~~~-~-d~f~~~l~~~~~~l~vG~p~~~ 352 (535)
+|+ ++|||||||+||++|||++.|+ ..++.++|.|+||.|++++|++++++ . +.|++.+.+.++. + ++
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~---~---~~ 315 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ---Q---SP 315 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH---C---CC
T ss_pred ccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh---c---cc
Confidence 764 5699999999999999999875 47899999999999999999988887 3 5677766665543 2 45
Q ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeccccccCCCCCCCceeccEEEe---cCCCCcccccccccccceEEeec
Q 009407 353 DADLGPVISKQAKERICRLIQSGIESGARLLLDGRNIVVPGYEHGNFIGPTILT---DVTADMECYKEEIFGPVLLCMQA 429 (535)
Q Consensus 353 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~---~v~~d~~i~~eE~FgPvl~v~~~ 429 (535)
++.+||+++..+++++ ++.+..+|++++.||.. +.+..|+++. ++..++++++||+||||++|++|
T Consensus 316 ~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 316 STLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE--------SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp BCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC--------TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred ccccccchhhhhhhhh---hhhhhhhhhhccccccc--------ccccCCccccccccccccchhhcccccCCeeeeeec
Confidence 7889999998887765 56677789888887753 3333444443 34457889999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEecC--CHHHHHHHHhhcc--eeEEEEcCCCCC------CCCCCCccCCCCCCCCCCCcc
Q 009407 430 DSLEEAIKIVNKNQYGNGAAIFTS--SGAAARKFQTEIE--AGQVGINVPIPV------PLPFFSFTGSKASFAGDLNFY 499 (535)
Q Consensus 430 ~~~~eai~~~N~~~~gLsa~V~t~--d~~~a~~~~~~l~--~G~V~iN~~~~~------~~~~~pfGG~~~Sg~G~~~~~ 499 (535)
+|+||||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||+++.. ...+.||||.+.||.| ..
T Consensus 385 ~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~---~~ 461 (504)
T d1ez0a_ 385 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST---SV 461 (504)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC---SS
T ss_pred CCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC---cc
Confidence 999999999999999999999996 5568999999997 899999986421 1234588888888855 35
Q ss_pred hHHHHHhchheeEE
Q 009407 500 GKAGVNFYTQIKTV 513 (535)
Q Consensus 500 g~~gl~~~t~~k~v 513 (535)
|.+|+++|+++.++
T Consensus 462 G~~~i~~f~r~v~~ 475 (504)
T d1ez0a_ 462 GAEAIHRWLRPVAY 475 (504)
T ss_dssp SGGGGGGGEEEEEE
T ss_pred hHHHHHHHhchhhh
Confidence 89999999877543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.6e-66 Score=543.77 Aligned_cols=388 Identities=14% Similarity=0.139 Sum_probs=305.3
Q ss_pred HHHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCChHHhhhh------------HHHHHHH
Q 009407 78 EEFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITTEQGKTLKDAQGD------------VFRGLEV 145 (535)
Q Consensus 78 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e------------v~~~~~~ 145 (535)
+|+.+++++|++||++|+++|..+|.++|+++++.|++++++|++++++|+||+..++..| +..+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887665 4556677
Q ss_pred HHHHHhhHHHhcCccccCCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHHHH
Q 009407 146 VEHSCGMATLQMGEYVPNVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLAEL 225 (535)
Q Consensus 146 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~ 225 (535)
+++++.......+.... ..........+.|+|+++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDS-WVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEE-EECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhccccccc-cccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 77776655444433322 12223456678899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCcCc----eecccC-ChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcc-eeeeCCCCCH
Q 009407 226 AMEAGLPDGV----LNIVHG-THDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKN-HGIVLPDANM 299 (535)
Q Consensus 226 l~~aGlP~g~----v~vv~g-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~-p~iV~~dAdl 299 (535)
+.+++.|.++ ++.+.+ ..+.+..+..++ .+.||||+..+..+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLR---EYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT---TTCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhccccc---ccCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 9887666555 455544 344555555443 344444444556667777777788888888755 6889999999
Q ss_pred HHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHc
Q 009407 300 DATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIES 378 (535)
Q Consensus 300 ~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 378 (535)
|.|++.+++++|.| ||.|++++|++||++ +|+|+++|.+...+..++.+.++..
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~------------------------ 291 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT------------------------ 291 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH------------------------
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh------------------------
Confidence 99999999999877 999999999988888 8999999998887766554332110
Q ss_pred CCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHH
Q 009407 379 GARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAA 458 (535)
Q Consensus 379 Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a 458 (535)
..+.+.+... ....++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++
T Consensus 292 -------------------~~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a 349 (414)
T d1o20a_ 292 -------------------REIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNA 349 (414)
T ss_dssp -------------------HHHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHH
T ss_pred -------------------hhhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHH
Confidence 0111111111 223568999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEEcCCCCCCC-CCCCccCCCCCCCCCCCcchHHHHHhchheeEEEec
Q 009407 459 RKFQTEIEAGQVGINVPIPVPL-PFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQ 516 (535)
Q Consensus 459 ~~~~~~l~~G~V~iN~~~~~~~-~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~~ 516 (535)
+++++++++|+|+||+++.+.+ ..+||||..++|.|+.+.+|++|+++||+.|+|+.+
T Consensus 350 ~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~ 408 (414)
T d1o20a_ 350 KKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG 408 (414)
T ss_dssp HHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEEC
T ss_pred HHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEEC
Confidence 9999999999999999865432 334555443333344444599999999999999764
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-54 Score=453.23 Aligned_cols=398 Identities=16% Similarity=0.178 Sum_probs=278.9
Q ss_pred HHHHHHHHHHHhchhccCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH------HhCCChHHh------hh-hHHHHHHH
Q 009407 79 EFKAAVSAAKQAFPSWRNTPITTRQRVMLKLQELIRRDIDKLAMNITT------EQGKTLKDA------QG-DVFRGLEV 145 (535)
Q Consensus 79 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~------e~Gk~~~~a------~~-ev~~~~~~ 145 (535)
.++++++.|++|++.|+.++.++|.++|+++++.|++++++|+++..+ +.|.+...- .. .+..+++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 467889999999999999999999999999999999999999886544 445443211 01 24445555
Q ss_pred HHHHHhhHHHhcCcccc--CCCCCceeeeeeccCceEEeecCCCcchhhHhhhhhhhhhcCCeeeecCCCCChHHHHHHH
Q 009407 146 VEHSCGMATLQMGEYVP--NVSNGIDTYSLREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASIMLA 223 (535)
Q Consensus 146 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 223 (535)
++..+...+.. +..+. ..+.+...+..+.|+|||++| ||++| +.++.+.++||++||+|||||++.++.|+..++
T Consensus 84 l~~i~~~~dpv-g~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhccccc-eeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 66555443322 11111 123566778899999999998 66777 677888999999999999999999999998887
Q ss_pred HHH--------HHcCCCcCceecccCChhHHHHHHhCCCcCEEEEeCChHHHHHHHHHHhcCCCeEEEeCCCcceeeeCC
Q 009407 224 ELA--------MEAGLPDGVLNIVHGTHDTVNAICDDANIRAISFVGSNVAGMHIYARASAKGKRVQSNMGAKNHGIVLP 295 (535)
Q Consensus 224 ~~l--------~~aGlP~g~v~vv~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~lelgG~~p~iV~~ 295 (535)
+++ .++|+|++++++++++.++++.|..|++||.|+||||...++.+.+.+ .+|++.++||++|+||++
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G~~~~~Vd~ 237 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 237 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCCccceeecc
Confidence 665 477999999999998878889999999999999999999988876664 369999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCCccCcceEEEeCC-hhHHHHHHHHHHhc-ccccCCCCCCCCcCCCCCHHHHHHHHHHHH
Q 009407 296 DANMDATLNALAAAGFGAAGQRCMALSTVVFVGD-SKSWEDKLVERAKA-LKVNAGTEADADLGPVISKQAKERICRLIQ 373 (535)
Q Consensus 296 dAdl~~Aa~~iv~~~~~~~GQ~C~a~~~vlv~~~-~d~f~~~l~~~~~~-l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~ 373 (535)
|||+|.|++.++.++|.++|| |++.++++||++ ++.|...+....+. ..+. .++. +.....
T Consensus 238 ~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~gv~l~------------~~~~----~~~~~~ 300 (436)
T d1vlua_ 238 DADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEGGVTIH------------ATKD----LKTAYF 300 (436)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHHCCCBE------------ECHH----HHHHHH
T ss_pred cccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhCCcEEE------------eCHH----HHHHhh
Confidence 999999999999999999996 888899978777 66665444333332 1110 0111 222222
Q ss_pred HHHHcCCEEEeccccccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecC
Q 009407 374 SGIESGARLLLDGRNIVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTS 453 (535)
Q Consensus 374 ~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~ 453 (535)
....+++ + ..+....|++....+. .|.+|.|+|+++|++++|+||||+++|+++||||++|||+
T Consensus 301 ~~~~~~~------~-------~~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~ 364 (436)
T d1vlua_ 301 DKLNELG------K-------LTEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTE 364 (436)
T ss_dssp HHHHHHT------C-------CCHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECS
T ss_pred hhhhhcc------c-------ccccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEEC
Confidence 2111111 1 1222333444333222 3689999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeEEEEcCCCCCCCC-CCCccCCCCCCCCCCCcchHHHHHhchheeEEEe
Q 009407 454 SGAAARKFQTEIEAGQVGINVPIPVPLP-FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQ 515 (535)
Q Consensus 454 d~~~a~~~~~~l~~G~V~iN~~~~~~~~-~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~~ 515 (535)
|.+.+++|.+++++|.|+||+++.+.+. .+.||+.-+-++++.+.+|+.|++++|..|++..
T Consensus 365 d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~ 427 (436)
T d1vlua_ 365 NKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIR 427 (436)
T ss_dssp CHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEE
T ss_pred CHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEE
Confidence 9999999999999999999999877653 3555654233356667789999999999999875
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.83 E-value=0.019 Score=56.59 Aligned_cols=328 Identities=13% Similarity=0.074 Sum_probs=181.1
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHhCCC----hHHhhhhHHHHH--------HHHHHHHhhHHHhcCcccc---
Q 009407 98 PITTRQRVMLKLQELIRRDIDKLAMNITTEQGKT----LKDAQGDVFRGL--------EVVEHSCGMATLQMGEYVP--- 162 (535)
Q Consensus 98 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~ev~~~~--------~~l~~~~~~~~~~~~~~~~--- 162 (535)
..++-.+..+.+.+.++.+.|.-+...++...+- +.-...|+..+. +.|+.++...+.......+
T Consensus 25 ~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~ 104 (431)
T d1k75a_ 25 ASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPV 104 (431)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 3444556677777777778777666666655421 111122333322 2233333222211111111
Q ss_pred --CCCCCceeeeeeccCceEEeecCCC---cchhhHhhhhhhhhhcCCee--eecCCCCChHHHHHHHHHHHHcCCCcCc
Q 009407 163 --NVSNGIDTYSLREPLGVCAGICPFN---FPAMIPLWMFPVAVTCGNTF--VLKPSEKDPGASIMLAELAMEAGLPDGV 235 (535)
Q Consensus 163 --~~~~~~~~~~~~~P~GVv~~I~p~N---~P~~~~~~~l~~ALaaGN~V--VlKps~~~~~~~~~l~~~l~~aGlP~g~ 235 (535)
....|......+.|+--|++..|.- ||... +...+||-.+|+.= ++-|+...|.+ .-....+|+.+
T Consensus 105 ~~e~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsv-LM~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~~-- 177 (431)
T d1k75a_ 105 DVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTV-LMLATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD-- 177 (431)
T ss_dssp EEEEETTEEEEEEEEECSEEEEECCCSSSCCHHHH-HHHHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE--
T ss_pred eeeccCCceeeeeeeehhhheeeccCCCccchHHH-HHHHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCccc--
Confidence 1234666778889999999999975 66444 44577999999764 45565545432 22335566654
Q ss_pred eecccCChhHHHHHHh----CCCcCEEEEeCChHHHHHHHHHHhcCCCeEEE-eCCCcce--eeeCCCCCHHHHHHHHHH
Q 009407 236 LNIVHGTHDTVNAICD----DANIRAISFVGSNVAGMHIYARASAKGKRVQS-NMGAKNH--GIVLPDANMDATLNALAA 308 (535)
Q Consensus 236 v~vv~g~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~a~~~~~~v~l-elgG~~p--~iV~~dAdl~~Aa~~iv~ 308 (535)
|--+ |+.+...+|.- -|.||.|+=.|+.-+..+=........ .+-. -+.|.+= +|-+++||.+.++..++.
T Consensus 178 iy~~-GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~-~vgID~~aGPSEv~viAD~~a~p~~iAaDlla 255 (431)
T d1k75a_ 178 VFNV-GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD-GAAIDMPAGPSEVLVIADSGATPDFVASDLLS 255 (431)
T ss_dssp EEEC-CHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTT-SCEESCCCCCCEEEEEECTTSCHHHHHHHHHH
T ss_pred eEec-CChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCC-ccccccccCCceEEEEecCCCCHHHHHHHHHh
Confidence 2222 44454555653 578999999998876553323322211 1222 2335444 444556899998888877
Q ss_pred HHhhccCCCccCcceEEEeCChhHHHHHHHHHHhcccccCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecccc
Q 009407 309 AGFGAAGQRCMALSTVVFVGDSKSWEDKLVERAKALKVNAGTEADADLGPVISKQAKERICRLIQSGIESGARLLLDGRN 388 (535)
Q Consensus 309 ~~~~~~GQ~C~a~~~vlv~~~~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 388 (535)
-+=+...- +.+++..+ .++.+++.+.+.+.--..|. . +.++.+
T Consensus 256 QAEH~~~a-----~~ilvt~~-~~l~~~v~~~i~~~l~~l~r-----------~-------~i~~~s------------- 298 (431)
T d1k75a_ 256 QAEHGPDS-----QVILLTPA-ADMARRVAEAVERQLAELPR-----------A-------ETARQA------------- 298 (431)
T ss_dssp HHTTCTTC-----EEEEEESC-HHHHHHHHHHHHHHHHTCSS-----------C-------HHHHHH-------------
T ss_pred ccCCcccc-----eeEEEecc-HHHHHHHHHHHHHHhhhchH-----------H-------HHHHhh-------------
Confidence 66554442 23445444 33444444433211000000 0 000000
Q ss_pred ccCCCCCCCceeccEEEecCCCCcccccccccccceEEeecCCHHHHHHHHHcCCCCcEEEEecCCHHHHHHHHhhc-ce
Q 009407 389 IVVPGYEHGNFIGPTILTDVTADMECYKEEIFGPVLLCMQADSLEEAIKIVNKNQYGNGAAIFTSSGAAARKFQTEI-EA 467 (535)
Q Consensus 389 ~~~~~~~~g~~~~Ptvl~~v~~d~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l-~~ 467 (535)
+ +-. .++-++|++|+++++|..---| ..|.++|+. ++..++ .+
T Consensus 299 --------------------------~--~~~----~ii~v~~~~ea~~~~N~~APEH-L~l~~~~~~---~~~~~i~nA 342 (431)
T d1k75a_ 299 --------------------------L--NAS----RLIVTKDLAQCVEISNQYGPEH-LIIQTRNAR---ELVDSITSA 342 (431)
T ss_dssp --------------------------H--TTC----EEEECSSHHHHHHHHHHHCCSE-EEEESTTHH---HHGGGCCCC
T ss_pred --------------------------h--ccc----eEEEecCHHHHHHHHHhhhHHH-HHHHhcCHH---HHHhhhhhc
Confidence 0 111 2456789999999999965543 778899865 566666 59
Q ss_pred eEEEEcCCCC--------CCCCCCCccCCCCCCCCCCCcchHHHHHhchheeEEE
Q 009407 468 GQVGINVPIP--------VPLPFFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVT 514 (535)
Q Consensus 468 G~V~iN~~~~--------~~~~~~pfGG~~~Sg~G~~~~~g~~gl~~~t~~k~v~ 514 (535)
|.|++..+++ ..++-+|-||... +.|..+...|+...++.
T Consensus 343 GsIflG~~sp~a~GDY~aGpnHvLPT~G~Ar-------~~sgLsv~dF~k~~s~~ 390 (431)
T d1k75a_ 343 GSVFLGDWSPESAGDYASGTNHVLPTYGYTA-------TCSSLGLADFQKRMTVQ 390 (431)
T ss_dssp SEEEESTTCCHHHHHHTSSSCCCCCCTTGGG-------TCCCCCGGGGEEEEEEE
T ss_pred chhhcCCCCcchhhccccCCCccCCCCCcee-------ecCCCCHHHeeeeeeEE
Confidence 9999987653 2345688887542 22333478888876654
|