Citrus Sinensis ID: 009491


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530---
METRMKKYRQVSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCVKENSEISGHQVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMRSPVPDKPRNSSDRVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFREEEEKVIKIEESLLQELGL
cccccccccccccccccccccccccccccccEEcEEEEEEccccccccEEEEEccccccccHHHHHHHHHHHHHcccccHHHHHHccccccccEEEEccccccEEccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccEEEHHHHHHHHHcc
cccHcccccccccccccEcccccccccccccEEEEEEEEEcccccccccEEEEEccccccccHHHHHHHHHHHHcccccHHHcHccccccccEEEcccccccEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccEEEccccccccccccccccccccccccccccccHcHHcccccccccccccccccccccccEEEEcccccccccccHEcccccccHHHcHHccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
metrmkkyrqvsperakvwtekspkyhqltrkvPVVYYICRnrqlehphfievplssrdglylRDVIDRLNVLRGRGMASMYSwscksykngfvwhdlceddlilpahgdeyvlkgselfdesnsgrfspgvtTKIQSLrqltapepassrspddssssssmnekgtkhsqdddlspsvhhpgssgvspdstagkssswggslslteykiykndgladastqteenvnrakpretctrgvstddgsiepeitascqkqvpcvkenseisghqvsvspppssssasssggkteTLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLIscgsvsvkdhsfgviptyrprfshtkfpsplfstsimfgdldclsdnprlmglkledkeyfsgslIETKILKeegdehnalkrsssynadriskqldtvedkeesnsgqskcipRAIKASlgkqgrseamrspvpdkprnssdrvdssqtvsggtsngsskritesvsskkpskrldsFREEEEKVIKIEESLLQELGL
metrmkkyrqvsperakvwtekspkyhqltrkVPVVYYICRNRQLEhphfievplssrdglylRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRqltapepassrspddssssssMNEKGTkhsqdddlspsvHHPGSsgvspdstagkssSWGGSLSLTEYKIYKNDGladastqteenvnrakpretctrgvstddgsiepeitascqkqvPCVKENSEISghqvsvspppssssasssggktETLESLIradvskinsfrileeeeirmpTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETkilkeegdehnalkrsssynadriskqldtvedkeesnsgqskcipraikaslgkqgrseamrspvpdkprnssdrvdssqtvsggtsngsskritesvsskkpskrldsfreeeekviKIEESLLQELGL
METRMKKYRQVSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPAssrspddssssssMNEKGTKHSQDDDLSPSVHHPGSSGVSPDSTAGKssswggslslTEYKIYKNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCVKENSEISGHQvsvspppssssasssGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMRSPVPDKPRNSSDRVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFReeeekvikieeSLLQELGL
************************KYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSEL**************************************************************************************TEYKIY**************************************************************************************IRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKI*********************************************************************************************************************************
**********************************VVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSEL*******************************************************************************************************************************************************************************************************************MQLISCG***************************************************L**KEYFS****************************************************************************************************************************IKIEESLLQELG*
************************KYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSL************************************************************GGSLSLTEYKIYKNDGLAD************************DDGSIEPEITASCQKQVPCVKENS***************************LESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQ***************KCIPRAIKAS***************************************************************EKVIKIEESLLQELGL
****************************LTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELF*************************************************************************************TEY***KND**************************************************************************************D*S**N*******EEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPT*********************G*LDC*SDNPRLMGLKLEDKEYFSGSLIETKIL******H**************************************************************************************************DSFREEEEKVIKIEESLLQELGL
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METRMKKYRQVSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCKSYKNGFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCVKENSEISGHQVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMRSPVPDKPRNSSDRVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFREEEEKVIKIEESLLQELGL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query533
255565453525 conserved hypothetical protein [Ricinus 0.979 0.994 0.786 0.0
225436460536 PREDICTED: uncharacterized protein LOC10 0.971 0.966 0.755 0.0
224104719523 predicted protein [Populus trichocarpa] 0.924 0.942 0.764 0.0
449456056518 PREDICTED: uncharacterized protein LOC10 0.969 0.998 0.736 0.0
449518557518 PREDICTED: uncharacterized protein LOC10 0.969 0.998 0.732 0.0
356542674523 PREDICTED: uncharacterized protein LOC10 0.977 0.996 0.714 0.0
357472103530 Auxin-regulated protein [Medicago trunca 0.962 0.967 0.664 0.0
356541954532 PREDICTED: uncharacterized protein LOC10 0.981 0.983 0.666 0.0
224118328465 predicted protein [Populus trichocarpa] 0.784 0.898 0.762 1e-175
356550138417 PREDICTED: uncharacterized protein LOC10 0.776 0.992 0.733 1e-169
>gi|255565453|ref|XP_002523717.1| conserved hypothetical protein [Ricinus communis] gi|223537021|gb|EEF38657.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/529 (78%), Positives = 463/529 (87%), Gaps = 7/529 (1%)

Query: 1   METRMKKYRQ-VSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSR- 58
           ME RMKKYRQ VSPERAKVWTE+SPKY Q  RKV VVYY+CRNRQLEHPHFIEVPLSS+ 
Sbjct: 1   MEARMKKYRQQVSPERAKVWTERSPKYQQKNRKVAVVYYLCRNRQLEHPHFIEVPLSSQQ 60

Query: 59  DGLYLRDVIDRLNVLRGRGMASMYSWSCK-SYKNGFVWHDLCEDDLILPAHGDEYVLKGS 117
           DGLYL+DVI+RLNVLRGRGMASMYSWSCK SYKNGFVWHDL EDDLILPAHG+EYVLKGS
Sbjct: 61  DGLYLKDVIERLNVLRGRGMASMYSWSCKRSYKNGFVWHDLSEDDLILPAHGNEYVLKGS 120

Query: 118 ELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSP 177
           ELFDESNS RF P  T K+Q+L+QL  PEPASSR  DDSSSSSSMN K TKHSQ+D+LSP
Sbjct: 121 ELFDESNSDRFGPVGTIKMQNLKQL--PEPASSRCRDDSSSSSSMNGKETKHSQEDELSP 178

Query: 178 SVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCT 237
            +  PGSSGVSP+S  GK+SSW GSLSLTEYK+YK+DGLADASTQTEENV R K RETCT
Sbjct: 179 PLQRPGSSGVSPESRDGKNSSWNGSLSLTEYKVYKSDGLADASTQTEENVRRPKSRETCT 238

Query: 238 RGVSTDDGSIEPEITASCQKQVPCVKENSEISGHQVSVSPPPSSSSASSSGGKTETLESL 297
           RGVSTDDGS++ E   + Q +VP VKE+SEIS + VS  P  SSSSASSSGGKTETLESL
Sbjct: 239 RGVSTDDGSLDHECNNNYQNRVPRVKESSEISENSVSPPP--SSSSASSSGGKTETLESL 296

Query: 298 IRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPTYRPRFS 357
           IRADV+KINSFRILEEEEIRMP NARLKA+NMLMQLISCGS+SVKDHSFG+IPTYRPRFS
Sbjct: 297 IRADVNKINSFRILEEEEIRMPGNARLKASNMLMQLISCGSISVKDHSFGLIPTYRPRFS 356

Query: 358 HTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKR 417
           H+KF SPLFSTS+M G+LDCLS+NPRLMGL+LEDKEYFSGSL+ETK+LK+EG  HN LKR
Sbjct: 357 HSKFASPLFSTSLMLGELDCLSENPRLMGLRLEDKEYFSGSLVETKMLKQEGGGHNTLKR 416

Query: 418 SSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMRSPVPDKPRNSSD 477
           SSSYNADR  KQLD+ E+ +ES SG SKCIP AIKAS+ KQ RSE+MRSPV D+PRNSSD
Sbjct: 417 SSSYNADRSCKQLDSAENNDESASGHSKCIPLAIKASISKQPRSESMRSPVSDRPRNSSD 476

Query: 478 RVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFREEEEKVIKIEES 526
            VD S+T+   TSNGSS+RIT+ +S KK SK+LDSFREE+EKVIKIEES
Sbjct: 477 GVDGSETIHSSTSNGSSRRITDPLSGKKQSKKLDSFREEKEKVIKIEES 525




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436460|ref|XP_002274821.1| PREDICTED: uncharacterized protein LOC100253409 [Vitis vinifera] gi|147767898|emb|CAN64540.1| hypothetical protein VITISV_009523 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224104719|ref|XP_002313540.1| predicted protein [Populus trichocarpa] gi|222849948|gb|EEE87495.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449456056|ref|XP_004145766.1| PREDICTED: uncharacterized protein LOC101221316 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449518557|ref|XP_004166308.1| PREDICTED: uncharacterized protein LOC101230215 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356542674|ref|XP_003539791.1| PREDICTED: uncharacterized protein LOC100783687 [Glycine max] Back     alignment and taxonomy information
>gi|357472103|ref|XP_003606336.1| Auxin-regulated protein [Medicago truncatula] gi|355507391|gb|AES88533.1| Auxin-regulated protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356541954|ref|XP_003539437.1| PREDICTED: uncharacterized protein LOC100800618 [Glycine max] Back     alignment and taxonomy information
>gi|224118328|ref|XP_002331455.1| predicted protein [Populus trichocarpa] gi|222873533|gb|EEF10664.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356550138|ref|XP_003543446.1| PREDICTED: uncharacterized protein LOC100795715 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query533
TAIR|locus:2046213540 AT2G28150 "AT2G28150" [Arabido 0.934 0.922 0.564 2.1e-139
TAIR|locus:2168042423 AT5G59790 "AT5G59790" [Arabido 0.219 0.276 0.672 3.9e-67
TAIR|locus:2075331343 AT3G46110 [Arabidopsis thalian 0.202 0.314 0.645 1.6e-54
TAIR|locus:2184133414 AT5G10150 "AT5G10150" [Arabido 0.172 0.222 0.602 3.7e-39
TAIR|locus:504956226372 AT1G05577 "AT1G05577" [Arabido 0.195 0.279 0.471 5.2e-19
TAIR|locus:2046213 AT2G28150 "AT2G28150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
 Identities = 297/526 (56%), Positives = 368/526 (69%)

Query:     1 METRMKKY-RQVSPERAKVWTEKSPKYHQLTRKVPVVYYICRNRQLEHPHFIEVPLSSRD 59
             ME RMKKY R+VSPERAKVWTEKSPKYHQ  +KV +VYY+ +NRQLEHPHF+EV +SS +
Sbjct:     1 MEARMKKYSREVSPERAKVWTEKSPKYHQKIKKVQIVYYLSKNRQLEHPHFMEVLISSPN 60

Query:    60 GLYLRDVIDRLNVLRGRGMASMYSWSCK-SYKNGFVWHDLCEDDLILPAHGDEYVLKGSE 118
             GLYLRDVI+RLNVLRGRGMASMYSWS K SY+NGFVWHDL EDDLILPA+G+EYVLKGSE
Sbjct:    61 GLYLRDVIERLNVLRGRGMASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSE 120

Query:   119 LFDESNSGRFSPGVTTKIQSLRQLTAPEPAXXXXXXXXXXXXXMNEKGT-KHS-QDDDLS 176
             LFDESNS  FSP V    Q+++Q+    P+              N KGT KHS +DD+LS
Sbjct:   121 LFDESNSDHFSPIVNLATQNMKQIVVEPPSSRSMDDSSSSSSMNNGKGTNKHSHEDDELS 180

Query:   177 P-SVHHPGSSGVSPDSTAGKXXXXXXXXXXTEYKIYKNDGLADASTQTEENVN-RAK-PR 233
             P ++    SSGVSPDS   K           EYK+YK++GLADASTQT+E V+ R+K P 
Sbjct:   181 PPALRSVSSSGVSPDSRDAKNSSSWCLA---EYKVYKSEGLADASTQTDETVSGRSKTPI 237

Query:   234 ETCTRGVSTD-DGSIEPEITAS-CQKQVPCVKENSEISGHQXXXXXXXXXXXXXXXGGKT 291
             ET +RGVSTD D S EPE + +    +  C  +  E +                  GGKT
Sbjct:   238 ETFSRGVSTDEDVSSEPETSENNLVSEASCAGKERESAEISRNSVSPPFSNSASSLGGKT 297

Query:   292 ETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVKDHSFGVIPT 351
             +TLESLIRADVSK+NSFRILE+E++RMP   RL+A+NMLMQLISCGS+SVKD++FG++PT
Sbjct:   298 DTLESLIRADVSKMNSFRILEQEDVRMPAIPRLRASNMLMQLISCGSISVKDNNFGLVPT 357

Query:   352 YRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDE 411
             Y+P+F H+KFPSP FS+S M GDLD LS+ P LMGL++E+KEYFSGSL+ETK+ K++  +
Sbjct:   358 YKPKFGHSKFPSPFFSSSFMMGDLDRLSETPSLMGLRMEEKEYFSGSLVETKLQKKDAAD 417

Query:   412 HNA-LKRSSSYNADRISKQLDTVEDKEESNSGQSKCIPRAIKAS--LGKQGRSEAMRSPV 468
              NA LKRSSSYN DR S Q+   E+ + S    SK  P + KAS  LGKQ      +  V
Sbjct:   418 SNASLKRSSSYNGDRASNQMGVAENGD-SKPDSSKNNPSSRKASSILGKQ------QPLV 470

Query:   469 PDKPRNSSDRVDSSQTVSGGTSNGSSKRITESVSSKKPSKRLDSFR 514
              +K R+SS+    +   +  T +  SKRITES+  +KP    DSFR
Sbjct:   471 SEKRRDSSEDTTKNIPCTTKTHDACSKRITESL--RKP----DSFR 510




GO:0003674 "molecular_function" evidence=ND
GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2168042 AT5G59790 "AT5G59790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075331 AT3G46110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184133 AT5G10150 "AT5G10150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956226 AT1G05577 "AT1G05577" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query533
pfam06136308 pfam06136, DUF966, Domain of unknown function (DUF 1e-112
>gnl|CDD|218908 pfam06136, DUF966, Domain of unknown function (DUF966) Back     alignment and domain information
 Score =  335 bits (860), Expect = e-112
 Identities = 181/406 (44%), Positives = 221/406 (54%), Gaps = 107/406 (26%)

Query: 33  VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCK-SYKN 91
           VPVVYY+ RN QLEHPHFIEV +SSR+GLYLRDVI+RLN LRG+GMA+MYSWSCK SYKN
Sbjct: 1   VPVVYYLSRNGQLEHPHFIEVHVSSRNGLYLRDVINRLNDLRGKGMAAMYSWSCKRSYKN 60

Query: 92  GFVWHDLCEDDLILPAHGDEYVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSR 151
           G+VWHDL EDDLI PA G+EYVLKGSE+ D S+S                   PE ASSR
Sbjct: 61  GYVWHDLSEDDLIYPASGNEYVLKGSEILDSSSSKGD----------------PEEASSR 104

Query: 152 SPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDSTAGKSSSWGGSLSLTEYKIY 211
              + S +  +N +                              + SW  S  L EYK+Y
Sbjct: 105 KLQEESDTPPVNRR-----------------------------ANQSWSSS-DLAEYKVY 134

Query: 212 KNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCVKENSEISGH 271
           K +  ADASTQT++  +R                                  E++E+S  
Sbjct: 135 KAEEPADASTQTDDRRSRD-----------------------------SSEAESTELSRE 165

Query: 272 QVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLM 331
           ++S   PPSSSS+ SS    ETLESLI+AD     SFR LEE+E       R++A+++LM
Sbjct: 166 EIS---PPSSSSSPSSSSSPETLESLIKADGRLSLSFRSLEEDESAG----RVRASSVLM 218

Query: 332 QLISCGSVSVKDH--------SFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPR 383
           QLISCGSVS KD            +    R R  H+   SP               +NPR
Sbjct: 219 QLISCGSVSTKDCGPVNAPDQGLALPEQRRERLGHSALCSP-------------SFENPR 265

Query: 384 LMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSSYNADRISKQ 429
              L+LE+KEYFSGSLIETK+   E D   ALKRSSSYNADR S+Q
Sbjct: 266 FGHLQLEEKEYFSGSLIETKM---EKDAFPALKRSSSYNADRSSRQ 308


Family of plant proteins with unknown function. Length = 308

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 533
PF06136337 DUF966: Domain of unknown function (DUF966); Inter 100.0
PF0077884 DIX: DIX domain; InterPro: IPR001158 Dishevelled ( 98.25
smart0002183 DAX Domain present in Dishevelled and axin. Domain 97.61
KOG3571 626 consensus Dishevelled 3 and related proteins [Gene 83.47
>PF06136 DUF966: Domain of unknown function (DUF966); InterPro: IPR010369 This is a family of plant proteins confined to monocotyledons and mosses, with unknown function Back     alignment and domain information
Probab=100.00  E-value=1.3e-108  Score=829.94  Aligned_cols=325  Identities=59%  Similarity=0.951  Sum_probs=276.7

Q ss_pred             eeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeecc-cccCcceEeecCCCCccccCCCCe
Q 009491           33 VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCK-SYKNGFVWHDLCEDDLILPAHGDE  111 (533)
Q Consensus        33 v~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~K-~YKngfVW~Dl~ddD~I~P~~~~e  111 (533)
                      |+|||||||||||||||||||+|+++|||||||||+||++|||||||+||||||| +||||||||||+|||||||++|||
T Consensus         1 V~VVYYLsRnGqLEHPHfieV~~~s~~gL~LRDV~~RL~~LRGkGMp~~ySWS~KRsYKnGfVW~DL~ddD~I~P~~g~E   80 (337)
T PF06136_consen    1 VQVVYYLSRNGQLEHPHFIEVPLSSPQGLYLRDVKDRLTALRGKGMPDMYSWSCKRSYKNGFVWHDLSDDDLILPASGNE   80 (337)
T ss_pred             CcEEEEEccCCCCCCCeeEEeccCCCCCcCHHHHHHHHHHhhCCCcceeeEEeeeccccCCceeccCcCCCeeecCCCCc
Confidence            7999999999999999999999999999999999999999999999999999999 999999999999999999999999


Q ss_pred             eEEeccccccCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 009491          112 YVLKGSELFDESNSGRFSPGVTTKIQSLRQLTAPEPASSRSPDDSSSSSSMNEKGTKHSQDDDLSPSVHHPGSSGVSPDS  191 (533)
Q Consensus       112 YVLKgsel~~~~~~~r~~~v~~~k~q~lk~~~~~~p~s~~S~~~sSss~S~~~~E~~~~~ed~~~p~~~~~gss~~Sp~~  191 (533)
                      |||||||||+.+++.+++.+   +++.+++.....+.+...                  +++            ...+..
T Consensus        81 YVLKGSEl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------------~~~------------~~~~~~  127 (337)
T PF06136_consen   81 YVLKGSELFDGSSSSRFQNA---KVSSSKQPSPEEASSRSS------------------SES------------SSSPPV  127 (337)
T ss_pred             eEeeccccccCCcccccccc---cccccccccccccCCccc------------------ccc------------cccccc
Confidence            99999999999888666653   223322211111110000                  000            011122


Q ss_pred             cCCCCCCCCCCCCcccceeecccc---------ccccccchhhccccCCCCccccccccCCCCCChhhhhhhhcccCCCc
Q 009491          192 TAGKSSSWGGSLSLTEYKIYKNDG---------LADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPCV  262 (533)
Q Consensus       192 ~~~k~~s~~sS~~~~EYkvyk~~~---------~~DAsTQTed~~r~~~~~~~c~rgvsT~d~~~~~e~~e~~~~~~~~~  262 (533)
                      .++++++| +++++.||+|||++.         ++||+|||||.+++....                          ...
T Consensus       128 ~~~~~~~~-~s~~~~e~~~~k~~~~~~e~s~~~~~dasTqT~d~~~~~~~~--------------------------~~~  180 (337)
T PF06136_consen  128 NRRRSQSW-SSSDDNEYKVYKAEEPESEESPVFASDASTQTDDSRRRSREE--------------------------ENE  180 (337)
T ss_pred             cccCccCc-CccCccccccccccccccccccccccccCCCCcccccccccc--------------------------ccc
Confidence            34567788 777999999999865         899999999988754422                          122


Q ss_pred             cCCcccccCCcccCCCCCCCCCCCCCCCchhhHHHHhhhcccccccchhhhhhccCccccccchhhHHHHhhhccccccc
Q 009491          263 KENSEISGHQVSVSPPPSSSSASSSGGKTETLESLIRADVSKINSFRILEEEEIRMPTNARLKATNMLMQLISCGSVSVK  342 (533)
Q Consensus       263 ~~~~El~~e~~e~SpP~s~sS~~s~~~~~eTLEsLirAd~~~~~s~r~leee~~~~~~~~RlkassvLMQLIsCGSiSvK  342 (533)
                      +..+||+++  +++||+++ +.++...+++|||+||+||++.++++++++++++.++.++||||++||||||+||+|++|
T Consensus       181 ~~~~el~~e--e~s~~~~~-~~~s~~~~~~tlesl~~ad~~~~~s~~~~~~~~~~~~~~~r~r~SsvLmQLIsCGsis~~  257 (337)
T PF06136_consen  181 EEQTELSRE--EISPPSSS-SSSSSSSSPETLESLIKADGRGIRSFRISEEEDSSGPSSGRMRASSVLMQLISCGSISVK  257 (337)
T ss_pred             cccCceeec--ccCCCCCc-ccccCCCCccchhhhhcccccccccccccccccccccccCCccHHHHHHHHhcCCCcccc
Confidence            346899999  99988877 778888999999999999999999999999999988999999999999999999999999


Q ss_pred             c--CCCCCCcccCCCCCCCCCCCCCCccccccCccccccCCCcccCCccCCcccccccceeeeeccccCCcccccccccc
Q 009491          343 D--HSFGVIPTYRPRFSHTKFPSPLFSTSIMFGDLDCLSDNPRLMGLKLEDKEYFSGSLIETKILKEEGDEHNALKRSSS  420 (533)
Q Consensus       343 ~--~~~glip~ykpR~s~~~~ps~~~stsv~lgeld~~senpr~~g~rlEEKEYFSGSLVEtk~~~e~gd~~~aLKRSSS  420 (533)
                      +  ++|+++++|++||.+..|++++++++++        |||+|+++++||||||||||||||+.+ .++++++||||||
T Consensus       258 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------e~~~~~~~~~eekeyFSGslvet~~~~-~~~~~~~LkrSss  328 (337)
T PF06136_consen  258 DKHSGFGLIPPYRPRFPKSRFPSPAFSRTEM--------ENPRFGNLQLEEKEYFSGSLVETKKQE-TGDAAPVLKRSSS  328 (337)
T ss_pred             cccccccccccCccccccCCCCcccccchhh--------hchhhcCCcccccccccceeeeccccc-CCCCCcccccccc
Confidence            9  5999999999999999999998888765        999999999999999999999999776 6778999999999


Q ss_pred             chhhhhhcc
Q 009491          421 YNADRISKQ  429 (533)
Q Consensus       421 YNedR~s~~  429 (533)
                      |||||++++
T Consensus       329 yn~~r~~~~  337 (337)
T PF06136_consen  329 YNAERSSRQ  337 (337)
T ss_pred             ccchhhcCC
Confidence            999999874



>PF00778 DIX: DIX domain; InterPro: IPR001158 Dishevelled (Dsh) protein is an important component of the Wnt signal-transduction pathway Back     alignment and domain information
>smart00021 DAX Domain present in Dishevelled and axin Back     alignment and domain information
>KOG3571 consensus Dishevelled 3 and related proteins [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query533
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 43.7 bits (102), Expect = 2e-04
 Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 94/357 (26%)

Query: 202 SLSLTEYKIYKNDGLADASTQTEENVNRAKPRETCTRGVSTDDGSIEPEITASCQKQVPC 261
           S+    Y   ++    D     + NV+R +P                 ++  +  +    
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL---------------KLRQALLE---- 146

Query: 262 VKENSEISGHQVSVSPPPSSSSASSSG----GKTE-TLESLIRADVSKINSFRI--LEEE 314
           ++    +                   G    GKT   L+  +   V     F+I  L  +
Sbjct: 147 LRPAKNVLID----------------GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 315 EIRMPTNARLKATNMLMQLISCGSVSVKDHSFGV---IPTYRPRFSHTKFPSPLFSTSIM 371
               P    L+    L+  I     S  DHS  +   I + +         S  +     
Sbjct: 191 NCNSP-ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-LKSKPYENC-- 246

Query: 372 FGDLDCLSD--NPRLMGLKLEDKEYFSGS---LIETKILKEEGDEHNALKRSSSYNADRI 426
              L  L +  N +           F+ S   L+ T+       +      S++      
Sbjct: 247 ---LLVLLNVQNAKAW-------NAFNLSCKILLTTR------FKQVTDFLSAATTTHIS 290

Query: 427 SKQLDTVEDKEESNSGQSKCIPRAIKASLGKQGRSEAMR-SP-----VPDKPRNSSDRVD 480
                     +E  S   K +    +  L      E +  +P     + +  R+     D
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQ-DL----PREVLTTNPRRLSIIAESIRDGLATWD 345

Query: 481 SSQTVSGGTSNGSSKRITESVSSKKPS------KRLDSFREEEEKVIKIEESLLQEL 531
           + + V     +  +  I  S++  +P+       RL  F         I   LL  +
Sbjct: 346 NWKHV---NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS----AHIPTILLSLI 395


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query533
1wsp_A84 Axin 1 protein; signaling protein; 2.90A {Rattus n 97.81
3pz7_A91 Dixin; DIX domain, oligomerization, signaling prot 97.64
3pz8_A106 Segment polarity protein dishevelled homolog DVL-; 97.42
>1wsp_A Axin 1 protein; signaling protein; 2.90A {Rattus norvegicus} SCOP: d.15.1.8 PDB: 2d5g_A Back     alignment and structure
Probab=97.81  E-value=6.3e-05  Score=63.52  Aligned_cols=74  Identities=24%  Similarity=0.400  Sum_probs=60.3

Q ss_pred             eeeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeecc----cccCcceEeecCCCCccccC
Q 009491           32 KVPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCK----SYKNGFVWHDLCEDDLILPA  107 (533)
Q Consensus        32 kv~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~K----~YKngfVW~Dl~ddD~I~P~  107 (533)
                      -.-|+|||+.   -+.|.++-||   +..++|+|+|+-|      .-++.|-+-+|    -+..|.||.+|+||+-++|.
T Consensus         4 ~T~V~Y~~~~---e~~Py~~~ip---~~~iTL~dFK~~l------~k~g~yrffFK~~~~d~~~~~V~eEI~dD~~~LP~   71 (84)
T 1wsp_A            4 SIVVAYYFCG---EPIPYRTLVR---GRAVTLGQFKELL------TKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPV   71 (84)
T ss_dssp             CEEEEEEETT---CSSCEEEEET---TSCCBHHHHHHHC------CSCSCEEEEEEEECTTSTTSEEEEEECCTTCBCCC
T ss_pred             ceEEEEEeCC---CCcceEEecC---CCcccHHHHHHhc------CCCCceEEEEeecCccccCCceEEEEcCCCccccc
Confidence            3569999954   5799999876   2689999999998      33457888888    34458999999999999999


Q ss_pred             CCCeeEEecc
Q 009491          108 HGDEYVLKGS  117 (533)
Q Consensus       108 ~~~eYVLKgs  117 (533)
                      ..|-.|.|-.
T Consensus        72 ~eGkIva~v~   81 (84)
T 1wsp_A           72 FEEKIIGKVE   81 (84)
T ss_dssp             BTTBEEEEEE
T ss_pred             cCCEEEEEEE
Confidence            9999988753



>3pz7_A Dixin; DIX domain, oligomerization, signaling protein; 2.44A {Homo sapiens} Back     alignment and structure
>3pz8_A Segment polarity protein dishevelled homolog DVL-; DIX domain, oligomerization, signaling protein; 2.87A {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query533
d1wspa183 Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} 98.21
>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Ubiquitin-like
family: DIX domain
domain: Axin 1
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.21  E-value=1.8e-06  Score=70.71  Aligned_cols=74  Identities=24%  Similarity=0.405  Sum_probs=62.7

Q ss_pred             eeEEEEEecCCcCCCCeeEEecCCCCCCccHHHHHHHHHHhhCCCCccceeeecc----cccCcceEeecCCCCccccCC
Q 009491           33 VPVVYYICRNRQLEHPHFIEVPLSSRDGLYLRDVIDRLNVLRGRGMASMYSWSCK----SYKNGFVWHDLCEDDLILPAH  108 (533)
Q Consensus        33 v~VvYyL~r~g~leHPH~ieV~~~s~~gl~LrDV~~rL~~lRG~gM~~~ysWs~K----~YKngfVW~Dl~ddD~I~P~~  108 (533)
                      +-|+|||+.   -+.|.++-|+   .+.++|+|+|+-|      .-++.|-+-+|    .+-+|+||.|++|||-++|+.
T Consensus         4 ~~v~Y~~~~---e~~Py~~~ip---~~~iTL~dFK~~~------~~~G~y~f~FK~~~~d~~~~~V~~ei~dD~~~LP~~   71 (83)
T d1wspa1           4 IVVAYYFCG---EPIPYRTLVR---GRAVTLGQFKELL------TKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPVF   71 (83)
T ss_dssp             EEEEEEETT---CSSCEEEEET---TSCCBHHHHHHHC------CSCSCEEEEEEEECTTSTTSEEEEEECCTTCBCCCB
T ss_pred             eEEEEEeCC---CCCceEEecc---CCcccHHHHHHhc------CCCCcEEEEEEecCcccCCCeEEEEECCCCccCccc
Confidence            569999953   4689888776   3589999999999      55778999999    377899999999999999999


Q ss_pred             CCeeEEeccc
Q 009491          109 GDEYVLKGSE  118 (533)
Q Consensus       109 ~~eYVLKgse  118 (533)
                      .|-.|-|-.+
T Consensus        72 egkIvakv~~   81 (83)
T d1wspa1          72 EEKIIGKVEK   81 (83)
T ss_dssp             TTBEEEEEEE
T ss_pred             CCEEEEEEEe
Confidence            9999988654