Citrus Sinensis ID: 009522

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530--
Protein Sequence
MPELGFQEQRSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLGERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQKEDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALSRRRPASLDLNNATFISSPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRMLLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Secondary Structure (PSIPRED)
cccccHHHHHcccccccccccEEEEEccccccEEEcccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHccHHHHHHHccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHcccccccccccccccccEEEEEccccccEEccccccccccccccccccccccccHcEEHccccccccccccccccccccccccccccccccccccccccccHHHcccccccHHHHccccccccccccHHHHccHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEcccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccEEEccccEEEEEEcccccccccccccccHHHHccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mpelgfqeqrsayrardsspdsvIFTLESnfslfssasasvdrcsfasdahdqdSLASEISLHlgererqeslsgsggpdrdpdpnkvvtTTQQRNKHIRRLSKKAEQVKgtasraqkedsvataeddnrtldSARNSFSQSLKECQERRLRAEALsrrrpasldlnnatfissprlgamkkssnlsrktgtfpspgtpnyrnasvgmhkgwsservplqttgnrRQVGaallpfnngrtlpskwedaerwilspvagdgvarqsyvapqrrpksksgplgppglayyslyspampmfdggnfvnfmagspfsagviaadrlaiqpgahagnfpvsmepcmarsasvhgctetlnppslppqdekinglkdAATDVSrtisrrdmatqmspesgsysspkrmllsastpsalpiaeiqsvrssksdvrdvqvdEKVTVTRWskkhrtrtsgksseIVDDWRKKAADAQtsawditesTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYswnaldiyc
Flexible Loop (DISEMBL)
mpelgfqeqrsayrardsspdSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLGERERQEslsgsggpdrdpdpnkvvtttqqrnkhirrlskkaeqvkgtasraqkedsvataeddnrtldsarNSFSQSLKECQERRLRAEalsrrrpasldlnnatfissprlgamkkssnlsrktgtfpspgtpnyrNASVGMHKGWSSERVPLQTTGNRRQVGAallpfnngrtlpskWEDAERWILSpvagdgvarqsyvapqrrpksksgplgpPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAatdvsrtisrrdmatqmspesgsysspkRMLLSASTPSalpiaeiqsvrssksdvrdvqvdekvtvtrwskkhrtrtsgksseivddWRKKAAdaqtsawditestktiskikreeLRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Low Complexity Region (SEG)
MPELGFQEQRSAYRARDSSPDSVIFTLEsnfslfssasasVDRCSFASDAHDQDSLASEISLHLGERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQKEDSVATAEDDNRTLDSARNSFSQSLKECQerrlraealsrrrpaslDLNNATFISSPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRpksksgplgppglAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRMLLSASTPSALPIAEIqsvrssksdvrdvqvdEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Disordered region (IsUnstruct)
***********************IFTLESNFSL**************************************************************************************************************************************************************************************************VGAALLPFNNGRTLPSKWEDAERWILSPVAGDGV**********************GLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPV***************************************************************************************************************************************AWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIY*
Disordered Region (DISOPRED)
*********************SVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLGE*********************************************************************************************************************************************************************************KWEDAERWI***************************************************************VIAA*R***************************************************************************************************************************************************TSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Disordered Region (DISEMBL)
*******************PDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLG****************************************************************RTLDSARNSFSQSLKECQERRLRAEALSRRRPASLDLNNATFISSPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDGVARQS************GPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDM****************MLLSASTPSALPIAEIQ**************DEKVTVTR***************IVDDW**********AWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Disordered Region (DISPRO)
*******************PDSVIFTLESNFSL********************DSLASEISLHLG*******************P*******************************************************Q***ECQERRLRAEALSRRRPASLDLNNATFIS******************************ASVGM*K*******************AAL***NNGRTLPSKWEDAERWILSPV**********************PLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADR*******************************************************************************************************SDVRDVQVDEKVTVTRWSK***************************AWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPELGFQEQRSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLGERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHxxxxxxxxxxxxxxxxxxxxxDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALSRRRPASLDLNNATFISSPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRMLLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHSFFCLLFVCYSWNALDIYC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	532
441481995	565	remorin-1 protein [Dimocarpus longan]	0.922	0.869	0.771	0.0
255538278	601	DNA binding protein, putative [Ricinus c	0.949	0.840	0.672	0.0
359492027	570	PREDICTED: uncharacterized protein LOC10	0.928	0.866	0.676	0.0
147768915	556	hypothetical protein VITISV_004452 [Viti	0.939	0.899	0.624	1e-175
224067258	578	predicted protein [Populus trichocarpa]	0.911	0.839	0.625	1e-171
356552210	611	PREDICTED: uncharacterized protein LOC10	0.945	0.823	0.609	1e-156
449450229	589	PREDICTED: uncharacterized protein LOC10	0.932	0.842	0.612	1e-153
356562275	609	PREDICTED: uncharacterized protein LOC10	0.939	0.821	0.605	1e-152
357437795	620	Remorin [Medicago truncatula] gi|3554782	0.945	0.811	0.566	1e-144
227343505	361	remorin-like protein [Dimocarpus longan]	0.654	0.963	0.754	1e-142

>gi|441481995|gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]

 Score =  756 bits (1951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/508 (77%), Positives = 431/508 (84%), Gaps = 17/508 (3%)

Query: 10  RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEISLHLG--ER 67
           RS YRARD+SPDSVIFTLESNFSLFSSASASVDRCSFASDAHD DSLASEISLHL   +R
Sbjct: 2   RSGYRARDASPDSVIFTLESNFSLFSSASASVDRCSFASDAHDHDSLASEISLHLAGQDR 61

Query: 68  ERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQKEDSVATAED 127
           E  +  S SGGPDRDP+     +     N +  RL +KAE+VK      QKED+ AT +D
Sbjct: 62  ENHQQESSSGGPDRDPE-----SNKHSNNNNHSRLLRKAEKVK-----VQKEDNDATIDD 111

Query: 128 DNRTLDSARNSFSQSLKECQERRLRAEALS----RRRPASLDLNNATFISSPRLGAMKKS 183
           +NR LDSARNSFS SLKECQERR RA+ LS    RRRPASLDLNNA+ ISSPRLG MKKS
Sbjct: 112 ENRPLDSARNSFSLSLKECQERRSRADILSKKLDRRRPASLDLNNAS-ISSPRLGNMKKS 170

Query: 184 SNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPS 243
           SNLSRK+ TFPSPGTPNYR A+VGM KGWSSERVPLQT GNRRQVGAALLP NNGRTLPS
Sbjct: 171 SNLSRKSSTFPSPGTPNYRQANVGMQKGWSSERVPLQTAGNRRQVGAALLPLNNGRTLPS 230

Query: 244 KWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPAMPMFDGGNF 303
           KWEDAERWILSPVAGDG  RQSYVAPQRRPKSKSGPLGPPG+AYYSLYSPA+PMFDGGN 
Sbjct: 231 KWEDAERWILSPVAGDGGVRQSYVAPQRRPKSKSGPLGPPGVAYYSLYSPAVPMFDGGNV 290

Query: 304 VNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQD 363
            NFM GSPF+AGV+A D L I  G H G FP+ MEPCMARSASVHGC+E LN PSLP  D
Sbjct: 291 GNFMVGSPFTAGVLAPDGLGINSGDHGGAFPLRMEPCMARSASVHGCSEVLNQPSLPSHD 350

Query: 364 EKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRMLLSASTPSALPIAEIQSVRSS 423
           EKI+G +DAATD+SRTISRRDMATQMSPE  ++SSP+R   S STPSALPI E+Q V+SS
Sbjct: 351 EKIDGSRDAATDISRTISRRDMATQMSPEGSTHSSPERRPFSVSTPSALPIVELQGVQSS 410

Query: 424 KSDVRDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISK 483
           KS+VRDVQVD++VT+TRWSKKHR+R SGKSSEIVDDWRKKA D +TS+WDIT+STKTISK
Sbjct: 411 KSEVRDVQVDDRVTMTRWSKKHRSRISGKSSEIVDDWRKKALDTRTSSWDITDSTKTISK 470

Query: 484 IKREELRITAWENLQKAKAEAAIRKLEV 511
           +KREELRITAWENLQKAKAEAAIRKLE+
Sbjct: 471 VKREELRITAWENLQKAKAEAAIRKLEM 498

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538278|ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis] gi|223550905|gb|EEF52391.1| DNA binding protein, putative [Ricinus communis]

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/540 (67%), Positives = 414/540 (76%), Gaps = 35/540 (6%)

Query: 1   MPELGFQEQ---RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLA 57
           M EL +QE+   RS YRARD+SPDSVIFTLESNFSLFSSASASVDRCSFASDAHD+DSLA
Sbjct: 1   MAELVYQERSSSRSGYRARDASPDSVIFTLESNFSLFSSASASVDRCSFASDAHDRDSLA 60

Query: 58  SEISLHL----------GERERQESLSGSGGPDRDPDPNKVV---TTTQQRNKHIR-RLS 103
           SEISLHL          G  E +E+LSG   PDRDPDPNK+V   + T+Q++ H   RL 
Sbjct: 61  SEISLHLAGHEVGSGVGGGNELRETLSG---PDRDPDPNKLVIHSSNTKQQHAHAHSRLF 117

Query: 104 KKAEQVKGTASRAQKEDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALS----RR 159
           KK E+VK     + K       ED +  +DSARNSFS +LKECQERR R+EA++    RR
Sbjct: 118 KKVEKVKVQKEDSSKAAIELLEEDSSNLIDSARNSFSLALKECQERRSRSEAVTKKADRR 177

Query: 160 RPASLDLNNATFISSPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPL 219
           RPASLDLNN    SSPRL  MKKS+  SRK+GTFPSPGTPNYR+ASVGM KGWSSERVPL
Sbjct: 178 RPASLDLNNVIAASSPRLSGMKKSTTSSRKSGTFPSPGTPNYRHASVGMQKGWSSERVPL 237

Query: 220 QT-TGNRRQVGAA----LLPFNNGRTLPSKWEDAERWILSPVAGDGVARQSY-VAPQRRP 273
              + NRRQ   A    LLP  NGRTLPSKWEDAERWI SPV+GDG  R S    PQRRP
Sbjct: 238 HNLSNNRRQQANANASLLLP--NGRTLPSKWEDAERWIFSPVSGDGGMRTSINQVPQRRP 295

Query: 274 KSKSGPLGPPGLAYYSLYSPAMPMFDGGNFVNFM-AGSPFSAGVIAADRLAIQPGAHAGN 332
           KSKSGPLGPPG+AYYSLYSPAMP+FDGGN  NFM A SPFSAGVIAAD L ++   +   
Sbjct: 296 KSKSGPLGPPGIAYYSLYSPAMPVFDGGNMGNFMSASSPFSAGVIAADGLGMRSNGNGVA 355

Query: 333 FPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPE 392
           FPV  EPCMARS SVHGC+E L   S   QDEK++G+KDAATD+S ++SRRDMATQMSPE
Sbjct: 356 FPVRTEPCMARSVSVHGCSEVLPQSSSASQDEKLDGVKDAATDLS-SVSRRDMATQMSPE 414

Query: 393 SGSYSSPK-RMLLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSG 451
             ++SSP  R   SASTPS LPI E+QSV +SKS VRDVQVDE+VTVTRWSKKHR+R  G
Sbjct: 415 GSNHSSPSMRTSFSASTPSILPIVEVQSVHTSKSQVRDVQVDERVTVTRWSKKHRSRNQG 474

Query: 452 KSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
           K+SEIVDDWRKK+ DA++S WD++E+ K ISK KREE +ITAWENLQKAKAEAAIRKLE+
Sbjct: 475 KNSEIVDDWRKKSVDARSSPWDVSEAAKCISKAKREEAKITAWENLQKAKAEAAIRKLEM 534

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492027|ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera] gi|302142306|emb|CBI19509.3| unnamed protein product [Vitis vinifera]

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/520 (67%), Positives = 404/520 (77%), Gaps = 26/520 (5%)

Query: 1   MPELGFQEQ---RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLA 57
           M ELGFQ+Q   R    ARD+SPDSVIFT ESNFSLFSSASASVDRCSFASD HD DSLA
Sbjct: 1   MAELGFQDQSLLRFGLGARDASPDSVIFTQESNFSLFSSASASVDRCSFASDVHDHDSLA 60

Query: 58  SEISLHLGERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQ 117
           SE+SLHL   + QE+   S GPD  P+   V       +KH  RL +K E+ K       
Sbjct: 61  SEVSLHLAGHDLQET---SSGPDLIPNKATV-------HKH-SRLIRKEEKAK-----VL 104

Query: 118 KEDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALS----RRRPASLDLNNATFIS 173
           KED    AE++N  LDSARNSFS +LKECQ+RR R+EALS    RRRPASLDLNNAT  S
Sbjct: 105 KEDKQVEAEEENLVLDSARNSFSLALKECQDRRSRSEALSKKHDRRRPASLDLNNAT-SS 163

Query: 174 SPRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALL 233
           SPRLG MKKSS  SR++GTFPSPGTPNYR+++ G+ KGWSSERVP  T  NRR V AALL
Sbjct: 164 SPRLGGMKKSSASSRRSGTFPSPGTPNYRHSNFGIQKGWSSERVPSHTNVNRRHVSAALL 223

Query: 234 PFNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSP 293
           PFNNGRTLPSKWEDAERWI SPVAGDGV + S+  PQRRPKSKSGPLGPPG+AYYSLYSP
Sbjct: 224 PFNNGRTLPSKWEDAERWIFSPVAGDGVVKPSFPPPQRRPKSKSGPLGPPGIAYYSLYSP 283

Query: 294 AMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTET 353
           A+PMF+GGN  NFMAGSPFSAGVIA D LAI  G   G  PV  EPCM RSASVHGC+E 
Sbjct: 284 AIPMFEGGNAGNFMAGSPFSAGVIAPDGLAIHCGGRGGVMPVRTEPCMGRSASVHGCSEL 343

Query: 354 LNPPSL-PPQDEKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRM-LLSASTPSA 411
           LN  SL   +DEK +G+KDAATD+SRT+SRRD+ATQMSPE   +SSP+R    S S+P+ 
Sbjct: 344 LNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSPEGSIFSSPERKPSFSPSSPTV 403

Query: 412 LPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSA 471
           LPI E+QSV SSK ++RDVQVDE+VT+TRWSKKHR R  GK SE VD W+KKA +A +SA
Sbjct: 404 LPIVELQSVNSSKLEIRDVQVDERVTMTRWSKKHRGRIPGKGSENVDGWKKKAVEAHSSA 463

Query: 472 WDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
           W+++E+ K+ISK+KREE +ITAWENLQKAKAEAAIRKLE+
Sbjct: 464 WEVSETAKSISKVKREEAKITAWENLQKAKAEAAIRKLEM 503

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768915|emb|CAN66979.1| hypothetical protein VITISV_004452 [Vitis vinifera]

 Score =  622 bits (1605), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 358/573 (62%), Positives = 409/573 (71%), Gaps = 73/573 (12%)

Query: 1   MPELGFQEQ---RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLA 57
           M ELGFQ+Q   R    ARD+SPDSVIFT ESNFSLFSSASASVDRCSFASD HD DSLA
Sbjct: 1   MAELGFQDQSLLRFGLGARDASPDSVIFTQESNFSLFSSASASVDRCSFASDVHDHDSLA 60

Query: 58  SEISL--------------------------------------------HLGERERQESL 73
           SE+SL                                            HL   + QE+ 
Sbjct: 61  SEVSLDRIIGGALVLKIMDLIFSNPTGDGMRRIQLVRRFRRVEIFDLMQHLAGHDLQET- 119

Query: 74  SGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQKEDSVATAEDDNRTLD 133
             S GPD  P+   V       +KH  RL +K E+ K       KED    AE++N  LD
Sbjct: 120 --SSGPDLIPNKATV-------HKH-SRLIRKEEKAK-----VLKEDKQVEAEEENLVLD 164

Query: 134 SARNSFSQSLKECQERRLRAEALS----RRRPASLDLNNATFISSPRLGAMKKSSNLSRK 189
           SARNSFS +LKECQ+RR R+EALS    RRRPASLDLNNAT  SSPRLG MKKSS  SR+
Sbjct: 165 SARNSFSLALKECQDRRSRSEALSKKHDRRRPASLDLNNAT-SSSPRLGGMKKSSASSRR 223

Query: 190 TGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAE 249
           +GTFPSPGTPNYR+++ G+ KGWSSERVP  T  NRR V AALLPFNNGRTLPSKWEDAE
Sbjct: 224 SGTFPSPGTPNYRHSNFGIQKGWSSERVPSHTNVNRRHVSAALLPFNNGRTLPSKWEDAE 283

Query: 250 RWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAG 309
           RWI SPVAGDGV + S+  PQRRPKSKSGPLGPPG+AYYSLYSPA+PMF+GGN  NFMAG
Sbjct: 284 RWIFSPVAGDGVVKPSFPPPQRRPKSKSGPLGPPGIAYYSLYSPAIPMFEGGNAGNFMAG 343

Query: 310 SPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSL-PPQDEKING 368
           SPFSAGVIA D LAI  G   G  PV  EPCM RSASVHGC+E LN  SL   +DEK +G
Sbjct: 344 SPFSAGVIAPDGLAIHCGGRGGVMPVRTEPCMGRSASVHGCSELLNQSSLRDSRDEKFDG 403

Query: 369 LKDAATDVSRTISRRDMATQMSPESGSYSSPKRM-LLSASTPSALPIAEIQSVRSSKSDV 427
           +KDAATD+SRT+SRRD+ATQMSPE   +SSP+R    S S+P+ LPI E+QSV SSK ++
Sbjct: 404 VKDAATDISRTVSRRDIATQMSPEGSIFSSPERKPSFSPSSPTVLPIVELQSVNSSKLEI 463

Query: 428 RDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKRE 487
           RDVQVDE+VT+TRWSKKHR R  GK SE VD W+KKA +A +SAW+++E+ K+ISK+KRE
Sbjct: 464 RDVQVDERVTMTRWSKKHRGRIPGKGSENVDGWKKKAVEAHSSAWEVSETAKSISKVKRE 523

Query: 488 ELRITAWENLQKAKAEAAIRKLEVLHSFFCLLF 520
           E +ITAWENLQKAKAEAAIRKLEVL   F LLF
Sbjct: 524 EAKITAWENLQKAKAEAAIRKLEVL---FWLLF 553

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067258|ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|222844160|gb|EEE81707.1| predicted protein [Populus trichocarpa]

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 342/547 (62%), Positives = 389/547 (71%), Gaps = 62/547 (11%)

Query: 1   MPELGFQEQ----RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSL 56
           MPEL         RS +RARD+SPDSVIFTLESNFSLFSS SASVDRCSFASDA+D + L
Sbjct: 1   MPELVRHRDQISSRSGFRARDASPDSVIFTLESNFSLFSSTSASVDRCSFASDAYDHEYL 60

Query: 57  ASEISLHLGERERQESL-SGSGGPDRDPDPNKVVTTTQQRNKHIR---RLSKKAEQVKGT 112
           ASEISLHL   ++QES  SG       PDPNK+ T      +H     R S+KAE+ K  
Sbjct: 61  ASEISLHLAAHDQQESYWSG-------PDPNKLNTVGNNNKQHTHTHTRPSRKAEKAK-- 111

Query: 113 ASRAQKEDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALS----RRRPASLDLNN 168
               QKE      EDDN  LDSAR+SFS +LKECQE R R++A++    RRRPASLDLNN
Sbjct: 112 ---VQKE------EDDNNLLDSARSSFSLALKECQESRSRSDAITKKPDRRRPASLDLNN 162

Query: 169 ATFISSPRLGAMKKSSNLS-RKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQ 227
                SPRLG MKKS   S RK+GTFPSPGTPNY ++S GM KGWSSERVPL    NRRQ
Sbjct: 163 VVTSPSPRLGNMKKSIVYSSRKSGTFPSPGTPNY-HSSAGMQKGWSSERVPLPNNSNRRQ 221

Query: 228 V----GAALLPFNN-------GRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSK 276
           V     AA+ PFNN       GR LPSKWEDAERWI SPV+GDG  R S    QRRPKSK
Sbjct: 222 VMNATAAAVSPFNNNTNNNNNGRPLPSKWEDAERWIFSPVSGDGFVRSSIQPAQRRPKSK 281

Query: 277 SGPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQP-GAHAGNFPV 335
           SGPLGPPG+AYYSLYSPA+ +FDG N  NF+AGSPFSA VIAAD LA++  G+H   FP+
Sbjct: 282 SGPLGPPGVAYYSLYSPAIQVFDGRNMGNFIAGSPFSASVIAADGLAVKSNGSHGVAFPM 341

Query: 336 SMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESGS 395
             EPCMARS SVHGC+E L   SLP QDEK++G+KDAATD+SR +SRRDMATQMSPE  +
Sbjct: 342 RTEPCMARSVSVHGCSEMLAQSSLPSQDEKLDGVKDAATDISRAVSRRDMATQMSPEGSN 401

Query: 396 YSSPKRM-LLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSGKSS 454
           +SSP R    S STPS+L I E+Q   SSKS+VRDVQVDE+VTVTRWSKKHR R  GKSS
Sbjct: 402 HSSPTRQPSFSVSTPSSLAIVELQGFNSSKSEVRDVQVDERVTVTRWSKKHRARNHGKSS 461

Query: 455 EIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVLHS 514
           EIVDDWR++AADA                +KREE +ITAWENLQKAKAEA +RKLEVL  
Sbjct: 462 EIVDDWREEAADAL---------------VKREEAKITAWENLQKAKAEAELRKLEVL-- 504

Query: 515 FFCLLFV 521
           FF   F+
Sbjct: 505 FFPTCFM 511

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552210|ref|XP_003544462.1| PREDICTED: uncharacterized protein LOC100782306 [Glycine max]

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 335/550 (60%), Positives = 389/550 (70%), Gaps = 47/550 (8%)

Query: 1   MPELGFQEQRS-AYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASE 59
           M ELGFQE+RS   R  D+SPDSVIFTLESN SLFSSASASVDRCSFASDAHD DSLASE
Sbjct: 3   MRELGFQERRSWRRRGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDHDSLASE 62

Query: 60  ISLHLGERERQESLSGS---GGPDRDPDPNKVVTTTQQRN----------KHIR-RLSKK 105
           ISLHL  ++     + S    GPD D DPNK     QQR+          KH R R S K
Sbjct: 63  ISLHLAAQDHDGDFAHSESWSGPDPDLDPNK---RQQQRHADTDSDAAHTKHRRNRFSGK 119

Query: 106 AEQVKGTASRAQKEDSV--ATAEDDNRTL--DSARNSFSQSLKECQERRLRAEAL----S 157
            E+ K      QKE+       ED N+ L  DSARNSFS +LKECQ+RR R+EAL     
Sbjct: 120 GEKAK-----VQKEEDSDGGDTEDGNQHLEFDSARNSFSLALKECQDRRSRSEALFKKHD 174

Query: 158 RRRPASLDLNNATF---ISSPRLG--AMKKSSNLSRKTG--TFPSPGTPNYRNASVGMHK 210
           RRRPASLDLNNA     +SSP LG  AMKKS+  SR++G  TFPSPGTPNY +A+V M K
Sbjct: 175 RRRPASLDLNNAIGNGNVSSPHLGLSAMKKSTLCSRRSGSGTFPSPGTPNYLHATVAMQK 234

Query: 211 GWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDG-VARQSYVAP 269
           GWSSERVPL T+  R+QVGAALLPFNNGRTLPSKWEDAERWILSPV+GDG   R S  AP
Sbjct: 235 GWSSERVPLHTSAARKQVGAALLPFNNGRTLPSKWEDAERWILSPVSGDGGTGRASLPAP 294

Query: 270 QRRPKSKSGPLGPPGLA---YYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAA----DRL 322
           QRRPKSKSGPLGPPG+A   YYS+YSPA+P+F+G N  +FMA SPFSA V       D L
Sbjct: 295 QRRPKSKSGPLGPPGVAAVAYYSMYSPAVPLFEGANSRSFMAASPFSAAVSVPAAAADGL 354

Query: 323 AIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISR 382
               G   G      +PCMARS SVHGC++  +  SLP Q EK +G KDA T+VS  +SR
Sbjct: 355 TASSGGSCGVLSTRTDPCMARSVSVHGCSQMHSQSSLPAQGEKFDGFKDAGTNVSPALSR 414

Query: 383 RDMATQMSPESGSYSSPK-RMLLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRW 441
           RDMATQMSPE  S SSP  R   SASTP +LP++E +S+  SK D+RDV VDE VT+TRW
Sbjct: 415 RDMATQMSPEGSSCSSPSLRPSFSASTPPSLPLSEFRSLPFSKMDIRDVPVDEHVTMTRW 474

Query: 442 SKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAK 501
           SKKHR   SG+ SE VD W+ K + +++S+WDI+E +KT+SK KR E +I AWENLQKAK
Sbjct: 475 SKKHRALFSGRGSENVDSWKIKESSSRSSSWDISEGSKTVSKAKRVEAKINAWENLQKAK 534

Query: 502 AEAAIRKLEV 511
           AEAAI+KLE+
Sbjct: 535 AEAAIQKLEM 544

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450229|ref|XP_004142866.1| PREDICTED: uncharacterized protein LOC101202771 [Cucumis sativus] gi|449518785|ref|XP_004166416.1| PREDICTED: uncharacterized LOC101202771 [Cucumis sativus]

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 324/529 (61%), Positives = 384/529 (72%), Gaps = 33/529 (6%)

Query: 1   MPELGFQEQ----RSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSL 56
           +PE+GFQ+Q    R  +RARDSSPDSVI+ LES+FSLFSSASASV+RCSFAS+AHD+DSL
Sbjct: 9   VPEMGFQDQTASSRPGFRARDSSPDSVIYALESSFSLFSSASASVERCSFASEAHDRDSL 68

Query: 57  ASEISLHLGERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRA 116
            SEISLHL   +     S  GGPD  PDPNK   +    NKH  RL  K E+ K      
Sbjct: 69  ISEISLHLAGHDEGNHES-CGGPD--PDPNKPALS----NKH-SRLYTKGEKAKAN---- 116

Query: 117 QKEDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEA----LSRRRPASLDLNNATFI 172
           QK+DS    ED+NRT+DSARNSFS +LKECQ+ R R+EA    L RRRPASLDLNNAT  
Sbjct: 117 QKDDSNVDLEDENRTVDSARNSFSLALKECQDHRSRSEAQSRKLDRRRPASLDLNNATTT 176

Query: 173 SSPRLGAMKKSSNLS-RKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVG-A 230
           SSPRL A+KK+  +S RKTGTFPSPGTPNYR+ S GM KGWSSERVPL   G R+     
Sbjct: 177 SSPRLAAVKKNPVVSTRKTGTFPSPGTPNYRHNSFGMQKGWSSERVPLHNNGGRKHANNP 236

Query: 231 ALLPFNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSL 290
           ALL  N+GRTLPSKWEDAERWI SP++GDGV R S   PQRRPKSKSGPLGPPG AYYSL
Sbjct: 237 ALLTLNSGRTLPSKWEDAERWIFSPISGDGVVRNSVPLPQRRPKSKSGPLGPPGSAYYSL 296

Query: 291 YSPAMPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGC 350
           YSPA+P ++GG+F NF+ GSPFSAGVI+A+ L I  G H   F    EP MARS SVHGC
Sbjct: 297 YSPAVPAYEGGSFGNFITGSPFSAGVISANSLGIHSGGHEVAFHGQTEPSMARSLSVHGC 356

Query: 351 TETLNPPSLPPQDEKING-----LKDAATDVSRTISRRDMATQMSPESGSYSSPK-RMLL 404
           +E L   S     ++ +G     +KD+ TDVSR +SRRDMATQMSPES  +SSPK R  +
Sbjct: 357 SEMLGQLSSTTGLQEESGDILTRVKDSGTDVSRVVSRRDMATQMSPESSVHSSPKTRPSI 416

Query: 405 SASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKA 464
           SAS+ SA+ + E+ +V +SK ++RDVQVD +VT+TRWSKKH+     K S  +DD RKK 
Sbjct: 417 SASSSSAMHMFELGAV-TSKLEIRDVQVDNQVTMTRWSKKHKGSFPWKDS--LDDRRKKD 473

Query: 465 ADA--QTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
            DA  + S  DI    K+ISK+KREE +ITAWENLQKAKA+AAIRKLE+
Sbjct: 474 VDAVSRCSDLDIPHIGKSISKVKREEAKITAWENLQKAKADAAIRKLEM 522

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562275|ref|XP_003549397.1| PREDICTED: uncharacterized protein LOC100792609 [Glycine max]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 335/553 (60%), Positives = 390/553 (70%), Gaps = 53/553 (9%)

Query: 1   MPELGFQEQRS-AYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASE 59
           MPELGFQE+RS   R  D+SPDSVIFTLESN SLFSSASASVDRCSFASDAHD DSLASE
Sbjct: 1   MPELGFQERRSWRRRGGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDHDSLASE 60

Query: 60  ISLHL------GERERQESLSGSGGPDRDPDPNKVVTTTQQRN----------KHIR-RL 102
           ISLHL      G+  R ES SG    D DPD NK     QQR+          KH R R 
Sbjct: 61  ISLHLAVQDHDGDFARSESWSGQ---DPDPDLNKRQQQQQQRHADTDSDAVHGKHRRNRF 117

Query: 103 SKKAEQVKGTASRAQKEDSV--ATAEDDNRTL--DSARNSFSQSLKECQERRLRAEAL-- 156
           S K E+ K      QKE+       ED N+ L  DSARNSFS +LKECQ+RR R+E L  
Sbjct: 118 SGKREKAK-----VQKEEDSDGGDTEDGNQHLEFDSARNSFSLALKECQDRRSRSETLYK 172

Query: 157 --SRRRPASLDLNNATF---ISSPRL--GAMKKSSNLSRKTGT------FPSPGTPNYRN 203
              RRRPASLDLNNA     +SSPRL  GAMKKS+  +R++G+      FPSPGTPNY +
Sbjct: 173 KHDRRRPASLDLNNAIGNGNVSSPRLELGAMKKSTLCTRRSGSGSGNGNFPSPGTPNYLH 232

Query: 204 ASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSKWEDAERWILSPVAGDG-VA 262
           ASV M KGWSSERVPL T+  R+QVGAAL PFNNGRTLPSKWEDAERWILSPV+GDG   
Sbjct: 233 ASVAMQKGWSSERVPLHTSAARKQVGAALFPFNNGRTLPSKWEDAERWILSPVSGDGGTG 292

Query: 263 RQSYVAPQRRPKSKSGPLGPPG---LAYYSLYSPAMPMFDGGNFVNFMAGSPFSAGVIAA 319
           R S  APQRRPKSKSGPLGPPG   +AYYS+YSPA+P+F+ GN  +FMA SPFSA V  +
Sbjct: 293 RASLPAPQRRPKSKSGPLGPPGAAAVAYYSMYSPAVPLFESGNSGSFMAASPFSAAVSVS 352

Query: 320 DRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRT 379
              A    A +G    S +PCMARS SVHGC++  +  SLP Q EK +G KDA T+VS  
Sbjct: 353 AAAADGLTASSGG---STDPCMARSVSVHGCSQMQSQSSLPAQGEKFDGFKDAGTNVSPA 409

Query: 380 ISRRDMATQMSPESGS-YSSPKRMLLSASTPSALPIAEIQSVRSSKSDVRDVQVDEKVTV 438
           +SRRDMATQMSPE  S  S   R  LSASTPS+ P++E +S+  SK D+RDV VDE+VT+
Sbjct: 410 LSRRDMATQMSPEGSSCSSPSLRPSLSASTPSSFPLSEFKSLPFSKMDIRDVPVDERVTM 469

Query: 439 TRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQ 498
           TRWSKKHR   SG+ SE  D+W+ K +  ++S WDI+  +KT+SK KREE +I +WENLQ
Sbjct: 470 TRWSKKHRALFSGRGSENGDNWKIKESSCRSSFWDISGGSKTVSKSKREEAKINSWENLQ 529

Query: 499 KAKAEAAIRKLEV 511
           KAKAEAAIRKLE+
Sbjct: 530 KAKAEAAIRKLEM 542

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357437795|ref|XP_003589173.1| Remorin [Medicago truncatula] gi|355478221|gb|AES59424.1| Remorin [Medicago truncatula]

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 318/561 (56%), Positives = 377/561 (67%), Gaps = 58/561 (10%)

Query: 1   MPELGFQEQRSAYR-----------------ARDSSPDSVIFTLESNFSLFSSASASVDR 43
           M +LGF EQR ++R                   D+SPDSVIFTLESN SLFSSASASVDR
Sbjct: 1   MRDLGFHEQRRSWRRNTGSRTRNTTANTVTGGGDTSPDSVIFTLESNLSLFSSASASVDR 60

Query: 44  CSFASDAHDQDSLASEISLHL----GERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHI 99
           CSFASDAHD+DSL SEISLHL    G+    ES SG   PD DPDPN+     Q  +   
Sbjct: 61  CSFASDAHDRDSLNSEISLHLAGHGGDFAPSESWSG---PDPDPDPNQNHNRKQHADSDS 117

Query: 100 RRLSKKAEQV---KGTASRAQKEDSVATAEDDNR--TLDSARNSFSQSLKECQERRLRAE 154
            +  K  E +   K   ++ QKEDS   ++D N+    DSARNSFS +LKECQ+RR R E
Sbjct: 118 VQKKKLGETLFSGKAEKTKVQKEDSDIDSKDGNQLSEFDSARNSFSLALKECQDRRSRCE 177

Query: 155 AL----SRRRPASLDLNNATFI---SSPRL-GAMKKSSNLSRKTGT--------FPSPGT 198
           +L     RRRPASLDLNNA      SSPRL GA+KKS   SRK+GT        FPSPGT
Sbjct: 178 SLFKKQDRRRPASLDLNNANATGTGSSPRLVGAVKKSMVQSRKSGTGTATGTGTFPSPGT 237

Query: 199 PNYRN--ASVGMHKGWSSERVPLQTTGNRRQVGAAL--LPFNNGRTLPSKWEDAERWILS 254
           PNYR+    V M KGWSSERV    +G R+QVG  +  L  +NGRTLPSKWEDAERWILS
Sbjct: 238 PNYRHCQGGVAMQKGWSSERV---ASGGRKQVGNGVTALCLSNGRTLPSKWEDAERWILS 294

Query: 255 PVAG-DGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPAMPMFDGGNFVNFMAGSPFS 313
           PV+G DG  R S   P RRPKSKSGPLGPPG+AYYSLYSPA   FDGGNF+   A SPFS
Sbjct: 295 PVSGGDGTGRVSVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHFFDGGNFMT--AASPFS 352

Query: 314 AGVIA-ADRLAIQPGAHAGN-FPVSMEPCMARSASVHGCTETLNPPSLPPQDEKINGLKD 371
           A V A AD      G + G   P   +PCMARS SVHGC++     S+P ++EK +  KD
Sbjct: 353 AAVNASADGFTNSSGGNGGGGLPTRTDPCMARSVSVHGCSQMQGQSSIPSREEKFDAFKD 412

Query: 372 AATDVSRTISRRDMATQMSPESGSYSSPKRML-LSASTPSALPIAEIQSVRSSKSDVRDV 430
           A T+VS  +SRRDMATQMSPE  S SSP  M   SAS P  LP+ ++QS+  SK D+RDV
Sbjct: 413 AGTNVSPAVSRRDMATQMSPEGSSCSSPNMMTSFSASIPPTLPVTDLQSISFSKMDIRDV 472

Query: 431 QVDEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELR 490
           QVDE+VT+TRWSKKH+   +G+ SE VD W+KK    ++S+W+I+E +KT+SK KREE +
Sbjct: 473 QVDERVTMTRWSKKHKALFTGRGSENVDSWKKKETSTRSSSWEISERSKTVSKAKREEAK 532

Query: 491 ITAWENLQKAKAEAAIRKLEV 511
           ITAWENLQKAKAEAAI+KLE+
Sbjct: 533 ITAWENLQKAKAEAAIQKLEM 553

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227343505|gb|ACP27605.1| remorin-like protein [Dimocarpus longan]

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 276/366 (75%), Positives = 298/366 (81%), Gaps = 18/366 (4%)

Query: 1   MPELGFQEQRSAYRARDSSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDQDSLASEI 60
           MPE   +  RS YRARD+SPDSVIFTLESNFSLFSSASASVDRCSFASDAHD DSLASEI
Sbjct: 1   MPEQQ-RSMRSGYRARDTSPDSVIFTLESNFSLFSSASASVDRCSFASDAHDHDSLASEI 59

Query: 61  SLHLG--ERERQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQK 118
           SLHL   +RE  +  S SGGPDRDP+     +     N +  RL +KAE+VK      QK
Sbjct: 60  SLHLAGQDRENHQQESSSGGPDRDPE-----SNKHSNNNNHSRLLRKAEKVK-----VQK 109

Query: 119 EDSVATAEDDNRTLDSARNSFSQSLKECQERRLRAEALS----RRRPASLDLNNATFISS 174
           ED+ AT +D+NR LDSARNSFS SLKECQERR RA+ LS    RRRPASLDLNNA+ ISS
Sbjct: 110 EDNDATIDDENRPLDSARNSFSLSLKECQERRSRADILSKKLDRRRPASLDLNNAS-ISS 168

Query: 175 PRLGAMKKSSNLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLP 234
           PRLG MKKSSNLSRK+ TFPSPGTPNYR A+VGM KGWSSERVPLQT GNRRQVGAALLP
Sbjct: 169 PRLGNMKKSSNLSRKSSTFPSPGTPNYRQANVGMQKGWSSERVPLQTAGNRRQVGAALLP 228

Query: 235 FNNGRTLPSKWEDAERWILSPVAGDGVARQSYVAPQRRPKSKSGPLGPPGLAYYSLYSPA 294
            NNGRTLPSKWEDAERWILSPVAGDG  RQSYVAPQRRPKSKSGPLGPPG+AYYSLYSPA
Sbjct: 229 LNNGRTLPSKWEDAERWILSPVAGDGGVRQSYVAPQRRPKSKSGPLGPPGVAYYSLYSPA 288

Query: 295 MPMFDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETL 354
           +PMFDGGN  NFM GSPF+AGV+A D L I  G H G FP+ MEPCMARSASVHGC+E L
Sbjct: 289 VPMFDGGNVGNFMVGSPFTAGVLAPDGLGINSGDHGGAFPLRMEPCMARSASVHGCSEVL 348

Query: 355 NPPSLP 360
           N PSLP
Sbjct: 349 NQPSLP 354

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	532
TAIR|locus:1005716683	555	AT1G45207 "AT1G45207" [Arabido	0.868	0.832	0.440	1.4e-87
TAIR|locus:2115085	427	AT4G36970 "AT4G36970" [Arabido	0.601	0.749	0.352	3.7e-32
TAIR|locus:2008625	347	AT1G67590 "AT1G67590" [Arabido	0.25	0.383	0.314	9.6e-13
TAIR|locus:2051673	486	AT2G02170 "AT2G02170" [Arabido	0.296	0.325	0.297	1.2e-09
TAIR|locus:2204197	509	AT1G30320 "AT1G30320" [Arabido	0.140	0.147	0.328	5.5e-08
TAIR|locus:2197081	442	AT1G53860 "AT1G53860" [Arabido	0.137	0.165	0.324	3e-05

TAIR|locus:1005716683 AT1G45207 "AT1G45207" [Arabidopsis thaliana (taxid:3702)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 224/508 (44%), Positives = 285/508 (56%)

Query:    10 RSAYRARDSSPDSVIFTLEXXXXXXXXXXXXVDRCSFASDAHDQDSLASEISLHLGER-E 68
             +S    RDSSPDS+IFT E            VDRCS  SDAHD+D      SL  G   E
Sbjct:    14 KSGGSRRDSSPDSIIFTPESNLSLFSSASVSVDRCSSTSDAHDRDD-----SLISGPSLE 68

Query:    69 RQESLSGSGGPDRDPDPNKVVTTTQQRNKHIRRLSKKAEQVKGTASRAQKEDSVATAEDD 128
             R + +S S    +D D +K    T  +N      S+K+ +VK     A KE+     +D+
Sbjct:    69 RDQRVSSSC---KDLDLDK--RGTGWKNSCN---SRKSNKVKA----AWKEEFEVKKDDE 116

Query:   129 NRTLDSARNSFSQSLKECQXXXXXXXXXXXXX----XXXXDLNNATFISSPRLGAMKKSS 184
             ++ LDSAR+SFS +L+ECQ                     DL+N T  +SPR+  +K++S
Sbjct:   117 SQNLDSARSSFSVALRECQERRSRSEALAKKLDYQRTVSLDLSNVTS-TSPRVVNVKRAS 175

Query:   185 NLSRKTGTFPSPGTPNYRNASVGMHKGWSSERVPLQTTGNRRQVGAALLPFNNGRTLPSK 244
               + K+  FPSPGTP Y ++   M KGWSSERVPL++ G R    A  LP  +GRT+PSK
Sbjct:   176 VSTNKSSVFPSPGTPTYLHS---MQKGWSSERVPLRSNGGRSPPNAGFLPLYSGRTVPSK 232

Query:   245 WEDAERWILSPVAGDGVARQSYVAP-QRRXXXXXXXXXXXXXAYYSLYSPAMPMFDGGNF 303
             WEDAERWI+SP+A +G AR S+ A  +RR             AYYSLYSPA+PM  GGN 
Sbjct:   233 WEDAERWIVSPLAKEGAARTSFGASHERRPKAKSGPLGPPGFAYYSLYSPAVPMVHGGNM 292

Query:   304 VNFMAGSPFSAGVIAADRLAIQPGAHAGNFPVSMEPCMARSASVHGCTETLNPPSLPPQD 363
                 A SPFSAGV+         G+    FP  ++P MARS S+HGC+ETL   S   QD
Sbjct:   293 GGLTASSPFSAGVLP--ETVSSRGSTTAAFPQRIDPSMARSVSIHGCSETLASSS---QD 347

Query:   364 EKINGLKDAATDVSRTISRRDMATQMSPESGSYSSPKRML-LSASTPSALPIAEIXXXXX 422
             +    +KDAATD ++ +SRRDMATQMSPE     SP+R    S S+PS LPI+E+     
Sbjct:   348 DIHESMKDAATD-AQAVSRRDMATQMSPEGSIRFSPERQCSFSPSSPSPLPISELLNAHS 406

Query:   423 XXXXXXXXXXXEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTIS 482
                        EKVTVTRWSKKHR    G  S++ D    KA + +    D+T +T    
Sbjct:   407 NRAEVKDLQVDEKVTVTRWSKKHRGLYHGNGSKMRDHVHGKATNHE----DLTCAT---- 458

Query:   483 KIKREELRITAWENLQKAKAEAAIRKLE 510
                 EE RI +WENLQKAKAEAAIRKLE
Sbjct:   459 ----EEARIISWENLQKAKAEAAIRKLE 482

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2115085 AT4G36970 "AT4G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 126/357 (35%), Positives = 162/357 (45%)

Query:   180 MKKSSNLSRKTGTFPSPGTPNYR-NASVGMHK--GWSSERVPLQTTGNRRQVGA--ALL- 233
             M+K+S  S   G F SPG P+Y  N      +    SS        G RR +G+  AL  
Sbjct:     1 MRKTSVSSNSFGGFLSPGAPSYADNKGWSSERVPHPSSTTSSSAINGGRRHIGSSSALTT 60

Query:   234 PFNNGRTLPSKWEDAERWILSPVAG--DGVARQSYVAP-QRRXXXXX------------- 277
             PF +GR +PSKWEDAERWI SPV+    GV   S V+  QRR                  
Sbjct:    61 PFYSGRAIPSKWEDAERWICSPVSTYPQGVCLNSSVSSEQRRQKSKSGPIVPPTLPHPHP 120

Query:   278 XXXXXXXXAYYSLYSPAMPM--FDGGNFVNFMAGSPFSAGVIAADRLAIQPGAHAGNFPV 335
                      Y+  YSP M M   D       +AGSPFS GV+ ADR+        G    
Sbjct:   121 TSSSSATGCYH--YSPRMMMRSMDAPPKGLMVAGSPFSTGVLEADRVFRGSVGGGGCDGY 178

Query:   336 SMEPCMARSAS-VHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESG 394
                P    S S V   +E  +  S     E+   +  A    S  +SRRDMATQMSPE  
Sbjct:   179 GRGPGHGHSRSWVDLMSEETSSLSSKTDTEEKAEMTTAMQ--SPVVSRRDMATQMSPEE- 235

Query:   395 SYSSPKRMLLSASTPSALPIAEIXXXXXXXXXXXXXXXXEKVTVTRWSKKHRTRTSGKSS 454
               +SP     + S P  + + E                   +   +  +   +R   +  
Sbjct:   236 --TSPNNN--NQSPPLVVSVIEPPPCRGEVREVKMDKGARMIKRPK-RRVMSSRIIRREQ 290

Query:   455 EIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
               V+D     A A +S+WDI+E   T+SK++REE +I AWENLQKAKAEAAIRKLEV
Sbjct:   291 PEVED--NSEASASSSSWDISEPAMTLSKLQREEAKIAAWENLQKAKAEAAIRKLEV 345

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2008625 AT1G67590 "AT1G67590" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
 Identities = 44/140 (31%), Positives = 68/140 (48%)

Query:   374 TDVSRTISRRDMATQMSPESGSYSSPKRMLLSASTP-SALPIAEIXXXXXXXXXXXXXXX 432
             T V R++  RDM T+M+P      S     + A+TP    P+                  
Sbjct:   141 TAVIRSVCVRDMGTEMTPIGSQEPSRTATPVRATTPVGRSPVTS--PVRASQRGEAVGVV 198

Query:   433 XEKVTVTRWSKKHRTRTSGKSSEIVDDWRKKAA-DAQTSAWDITESTKTISKIKREELRI 491
              E VT  R   +  +  S K +  V+  +  +A +A+  AWD  E  K +++ KREE++I
Sbjct:   199 METVTEVR---RVESNNSEKVNGFVESKKAMSAMEARAMAWDEAERAKFMARYKREEVKI 255

Query:   492 TAWENLQKAKAEAAIRKLEV 511
              AWEN +K KAE  ++K+EV
Sbjct:   256 QAWENHEKRKAEMEMKKMEV 275

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2051673 AT2G02170 "AT2G02170" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
 Identities = 53/178 (29%), Positives = 77/178 (43%)

Query:   339 PCMARSASVHGCTETLNPPSLPPQDEKINGLKDAATDVSRTISRRDMATQMSPESGSYSS 398
             P  ARS S+      + P  +  Q+   NG    AT   R           SP S   SS
Sbjct:   257 PSTARSVSMRDMGTEMTP--IASQEPSRNGTPIRATTPIR-----------SPISSEPSS 303

Query:   399 PKRMLLSASTPSALPIAEIXXXXXXXXXXXXXXXX-EKVTVTRWSKKHR----TRTSGKS 453
             P R   SAS  S   ++E                   K  +  W+ K        TS K+
Sbjct:   304 PGRQA-SASPMSNKELSEKELQMKTRREIMVLGTQLGKFNIAAWASKEDEDKDASTSLKT 362

Query:   454 SEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
                +    K  ++A+ +AW+  E  K +++ +REE++I AWEN QKAK+EA ++K EV
Sbjct:   363 KASLQT-SKSVSEARATAWEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEV 419

GO:0003677 "DNA binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2204197 AT1G30320 "AT1G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
 Identities = 25/76 (32%), Positives = 46/76 (60%)

Query:   435 KVTVTRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITESTKTISKIKREELRITAW 494
             K+ +  W+ K       K++   ++ +K   + + +AW+  E +K  ++ KREE+RI AW
Sbjct:   366 KMNIAAWASKEEEENK-KNNGDAEEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAW 424

Query:   495 ENLQKAKAEAAIRKLE 510
             E+ +KAK EA +R++E
Sbjct:   425 ESQEKAKLEAEMRRIE 440

GO:0003677 "DNA binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2197081 AT1G53860 "AT1G53860" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
 Identities = 24/74 (32%), Positives = 41/74 (55%)

Query:   439 TRWSKKHRTRTSGKSSEIVDDWRKKAADAQTSAWDITEST-KTISKIKREELRITAWENL 497
             +R  ++     S +  ++  + R+  ++++   WD  +   K   + +REE +I AW NL
Sbjct:   296 SREEEEEEISKSLRHFDMESELRRSVSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVNL 355

Query:   498 QKAKAEAAIRKLEV 511
             + AKAEA  RKLEV
Sbjct:   356 ENAKAEAQSRKLEV 369

GO:0003677 "DNA binding" evidence=ISS

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	532
pfam03763	112	pfam03763, Remorin_C, Remorin, C-terminal region	9e-13

>gnl|CDD|190741 pfam03763, Remorin_C, Remorin, C-terminal region

 Score = 64.3 bits (157), Expect = 9e-13
 Identities = 23/52 (44%), Positives = 35/52 (67%)

Query: 460 WRKKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEV 511
            +K  A+++  AW+  E  K  +K +REE +I AWEN +KAKAEA ++K+E 
Sbjct: 1   SKKSEAESRADAWEEAEKAKINNKYQREEAKIQAWENKKKAKAEAELKKIER 52

Remorins are plant-specific plasma membrane-associated proteins. In tobacco remorin co-purifies with lipid rafts. Most remorins have a variable, proline-rich C-half and a more conserved N-half that is predicted to form coiled coils. Consistent with this, circular dichroism studies have demonstrated that much of the protein is alpha-helical. Remorins exist in plasma membrane preparations as oligomeric structures and form filaments in vitro. The proteins can bind polyanions including the extracellular matrix component oligogalacturonic acid (OGA). In vitro, remorin in plasma membrane preparations is phosphorylated (principally on threonine residues) in the presence of OGA and thus co-purifies with a protein kinases(s). The biological functions of remorins are unknown but roles as components of the membrane/cytoskeleton are possible. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	532
PF03763	111	Remorin_C: Remorin, C-terminal region ; InterPro:	99.53

>PF03763 Remorin_C: Remorin, C-terminal region ; InterPro: IPR005516 Remorin binds both simple and complex galaturonides

Probab=99.53  E-value=3.3e-15  Score=131.52  Aligned_cols=51  Identities=49%  Similarity=0.756  Sum_probs=48.9

Q ss_pred             hhhhhhcccccccccccchhhhhhhhHHhHHHHHHhHHHHHHHHHHhHHHH
Q 009522          462 KKAADAQTSAWDITESTKTISKIKREELRITAWENLQKAKAEAAIRKLEVL  512 (532)
Q Consensus       462 k~~~esrAaAWEeaEkaK~~~R~qREEaKI~AWEnlQKAKAEA~mrKlEm~  512 (532)
                      ++.+++++.+||++|++|+++||+|||++|++|||+||+||||+|+|+|++
T Consensus         2 ~~~~~a~a~aWe~ae~aK~~~r~~ree~~I~aWEn~qkaKaea~m~k~E~k   52 (111)
T PF03763_consen    2 KEEVEAKADAWEEAEKAKINNRYEREEAKIQAWENLQKAKAEAEMRKIEEK   52 (111)
T ss_pred             cHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999999976

The N-terminal region of remorin is proline rich, while the C-terminal region has been predicted to form a coiled-coil, that is expected to interact with other macromolecules, most likely DNA. Functional similarities between the behavior of the proteins and viral proteins involved in intercellular communication have been noted [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	532
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 6e-05
 Identities = 24/152 (15%), Positives = 44/152 (28%), Gaps = 53/152 (34%)

Query: 428 RDVQVDEKVTVTRWSKKHRTRT------------------SGKSS---EIVDDWRKKAAD 466
            D QV  K  V+R     + R                   SGK+    ++   ++ +   
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 467 AQTSAWDITESTKTISKIKREELRITAWENL--------------------QKAKAEAAI 506
                W +      +      E  +   + L                    +    +A +
Sbjct: 181 DFKIFW-L-----NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234

Query: 507 RKLEVLHSFF-CLLF---VCYS--WNALDIYC 532
           R+L     +  CLL    V  +  WNA ++ C
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC 266

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00