Citrus Sinensis ID: 009560
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 532 | 2.2.26 [Sep-21-2011] | |||||||
| B0XN12 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.539 | 0.689 | 0.319 | 6e-35 | |
| Q4WK60 | 416 | Probable glucan 1,3-beta- | yes | no | 0.539 | 0.689 | 0.319 | 7e-35 | |
| A1CRV0 | 415 | Probable glucan 1,3-beta- | N/A | no | 0.537 | 0.689 | 0.313 | 3e-34 | |
| Q0CR35 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.518 | 0.663 | 0.322 | 1e-33 | |
| A2RAR6 | 416 | Probable glucan 1,3-beta- | yes | no | 0.531 | 0.680 | 0.297 | 2e-33 | |
| A1D4Q5 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.539 | 0.689 | 0.319 | 3e-33 | |
| Q5B5X8 | 405 | Probable glucan 1,3-beta- | no | no | 0.447 | 0.587 | 0.377 | 3e-33 | |
| Q7Z9L3 | 405 | Glucan 1,3-beta-glucosida | yes | no | 0.449 | 0.590 | 0.344 | 3e-32 | |
| B8N151 | 405 | Probable glucan 1,3-beta- | N/A | no | 0.449 | 0.590 | 0.344 | 3e-32 | |
| Q12700 | 425 | Glucan 1,3-beta-glucosida | N/A | no | 0.402 | 0.503 | 0.342 | 2e-30 |
| >sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=exgA PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 149 bits (375), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 42/329 (12%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G ++AK VL +H +TFIT +DF + + G+N VRIP+G+W A P P++
Sbjct: 72 EWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIGYW-AVSSLPDEPYV 130
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA+SWA +K +IDLH APGSQNG ++S R G W D +SQT+D
Sbjct: 131 DGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIAWQQGDTVSQTVDAF 189
Query: 322 DFLASRY-AKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
LA RY + + IE LNEP+ V L YY Q +VR+ P V +
Sbjct: 190 RALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVVRQIDPDTSVFLSDGF 249
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMST----------------VDNILFI 423
+ + ++ ++V+D H+Y +FD + +++ D + +
Sbjct: 250 LSTESWNGFKTG---EDVVMDTHHYEMFDNYLISLDIDGHVKSACDFGKQIEGSDKPVVV 306
Query: 424 YKSREAQLQALNNANGPLV---FIGEWVNE------WNVTSGTQKDYQD--------FGS 466
+ A + NG V + GE+ N N T G+ D D F
Sbjct: 307 GEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTTQGSVADLSDQERTDTRRFIE 366
Query: 467 AQLEVYNAASFGWAYWTLKND-RKHWDFE 494
AQL+ Y + GW +WT K + WD +
Sbjct: 367 AQLDAYEGKN-GWLFWTWKTEGAPGWDMQ 394
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 8 |
| >sp|Q4WK60|EXGA_ASPFU Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 157/329 (47%), Gaps = 42/329 (12%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G ++AK VL +H +TFIT +DF + + G+N VRIP+G+W A P P++
Sbjct: 72 EWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIGYW-AVSSLPDEPYV 130
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA+SWA +K +IDLH APGSQNG ++S R G W D +SQT+D
Sbjct: 131 DGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIAWQQGDTVSQTVDAF 189
Query: 322 DFLASRY-AKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
LA RY + + IE LNEP+ V L YY Q +VR+ P V +
Sbjct: 190 RALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVVRQIDPGTSVFLSDGF 249
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMST----------------VDNILFI 423
+ + ++ ++V+D H+Y +FD + +++ D + +
Sbjct: 250 LSTESWNGFKTG---EDVVMDTHHYEMFDNYLISLDIDGHVKSACDFGKQIEGSDKPVVV 306
Query: 424 YKSREAQLQALNNANGPLV---FIGEWVNE------WNVTSGTQKDYQD--------FGS 466
+ A + NG V + GE+ N N T G+ D D F
Sbjct: 307 GEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTTQGSVADLSDQERTDTRRFIE 366
Query: 467 AQLEVYNAASFGWAYWTLKND-RKHWDFE 494
AQL+ Y + GW +WT K + WD +
Sbjct: 367 AQLDAYEGKN-GWLFWTWKTEGAPGWDMQ 394
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1CRV0|EXGA_ASPCL Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 158/329 (48%), Gaps = 43/329 (13%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ LA G ++A+ +L +H ++FIT +DFN + + G+N VRIPVG+W PD P++
Sbjct: 72 EWTLAEVLGKDKARAILSQHWSSFITQDDFNQIAQAGMNHVRIPVGYWAVSAPD--EPYV 129
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA+SWA A +K +IDLH APGSQNG ++S R G W D +++T+D
Sbjct: 130 DGQLEFLDNAISWARAAGLKVMIDLHGAPGSQNGFDNSG-RKGPIAWQQGDTVARTVDAF 188
Query: 322 DFLASRY-AKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
LA RY + + IE +NEP+ V L YY Q ++V +P A V +
Sbjct: 189 KALAERYLPESDVVTAIEAVNEPNIPGGVNEGQLKEYYNQVLEVVHSINPDAGVFLSDGF 248
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMST----------------VDNILFI 423
Y N+V+D H+Y++FD +++ D + +
Sbjct: 249 LATASWNGYANG---ENVVMDTHHYHMFDNTLISLDINAHVRAACEFGNQIKGSDKPVVV 305
Query: 424 YKSREAQLQALNNANG---PLVFIGEWVNE------WNVTSGT--------QKDYQDFGS 466
+ A + NG P + G+W N N G+ + D + F
Sbjct: 306 GEWTGALTDCTKHLNGKDIPTRYEGQWANSPRYGDCGNKRQGSSSGLSEQERSDTRRFIE 365
Query: 467 AQLEVYNAASFGWAYWTLKND-RKHWDFE 494
AQL+ Y + GW +WT K + WD +
Sbjct: 366 AQLDAYEGKN-GWLFWTWKTEGAPGWDMQ 393
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q0CR35|EXGA_ASPTN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 153/326 (46%), Gaps = 50/326 (15%)
Query: 210 GHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALD 269
G + AK L H +TFIT +DF + G+N VRIP+G+W A + P P++ G LE LD
Sbjct: 78 GQDEAKARLIGHWDTFITEQDFFDIAAAGMNHVRIPIGYW-AVEALPGDPYVDGQLEYLD 136
Query: 270 NALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYA 329
A+ WA A +K I+DLH APGSQNG ++S R G W D + QT++ LA RY
Sbjct: 137 RAIEWAGAAGLKVIVDLHGAPGSQNGFDNSG-RKGAIQWGQGDTLGQTVNAFRKLAERYV 195
Query: 330 KHPALL-GIELLNEP-SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387
++ IE +NEP V D L YY+Q Y IV + SP ++ N P
Sbjct: 196 PSSDVVTAIEAVNEPFIPGGVNEDQLKEYYQQAYDIVTQMSPDVDLVFSDGFINPTPWNG 255
Query: 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEW 447
+ ++ G NIV+D H+Y +FD + MS D++ + QL A P+V +GEW
Sbjct: 256 FISDSG--NIVMDNHHYEVFDINLLRMSVDDHVRSVCDFGRTQLAP---ATKPVV-VGEW 309
Query: 448 VNEW-------------------------------------NVTSGTQKDYQDFGSAQLE 470
+++ QK+ + F AQL+
Sbjct: 310 TGAMTDCARYLNGRGVGARYDGAMGGESVGDCGPFIQGSVSDLSPDDQKNMRRFIEAQLD 369
Query: 471 VYNAASFGWAYWTLKNDR--KHWDFE 494
+ S GW +W K ++ WD +
Sbjct: 370 AWEMKS-GWLFWNWKTEQGAPGWDMK 394
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A2RAR6|EXGA_ASPNC Probable glucan 1,3-beta-glucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 157/333 (47%), Gaps = 50/333 (15%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G + A+ L H ++FIT DF+ + + G+N VRIP+G+W A P P++
Sbjct: 72 EWTLCQILGKDEAQAKLSSHWSSFITQSDFDRMAQAGLNHVRIPIGYW-AVAPIDGEPYV 130
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G ++ LD A++WA A +K ++DLH APGSQNG ++S R G W D ++QT+
Sbjct: 131 SGQIDYLDQAVTWARAAGLKVLVDLHGAPGSQNGFDNSGHR-GPIQWQQGDTVNQTMTAF 189
Query: 322 DFLASRYAKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380
D LA RYA+ + IE +NEP+ V D L YY V++ +P+ + +
Sbjct: 190 DALARRYAQSDTVTAIEAVNEPNIPGGVNEDGLKNYYYGALADVQRLNPSTTLFMSDGF- 248
Query: 381 NADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGP 440
P+E + + N+V+D H+Y +FDT ++MS D+ + + Q ++ P
Sbjct: 249 --QPVESWNGFMQGSNVVMDTHHYQVFDTGLLSMSIDDH---VKTACSLATQHTMQSDKP 303
Query: 441 LVFIGEWVNEW---------------------------NVTSGTQKDYQDFGS------- 466
+V +GEW + T + DF +
Sbjct: 304 VV-VGEWTGALTDCAKYLNGVGNAARYDGTYMSTTKYGDCTGKSTGSVADFSADEKANTR 362
Query: 467 ----AQLEVYNAASFGWAYWTLKND-RKHWDFE 494
AQLE Y S GW +WT K + WD +
Sbjct: 363 RYIEAQLEAYEMKS-GWLFWTWKTEGAPGWDMQ 394
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1D4Q5|EXGA_NEOFI Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 158/329 (48%), Gaps = 42/329 (12%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G ++AK VL +H +TFIT DF+ + + G+N VRIP+G+W A P P++
Sbjct: 72 EWTLTATLGQDQAKAVLSQHWSTFITQGDFHRIAQAGMNHVRIPIGYW-AVSSLPDEPYV 130
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA+SWA +K +IDLH APGSQNG ++S R G W + +SQT+D
Sbjct: 131 DGQLEYLDNAISWARDAGLKVVIDLHGAPGSQNGFDNSG-RKGPIAWQQGNTVSQTVDAF 189
Query: 322 DFLASRY-AKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
LA RY + + IE LNEP+ V L YY Q +VR+ +P V +
Sbjct: 190 RALAERYLPQSDVVAAIEALNEPNIPGGVSEAGLRDYYDQIADVVRQINPDTSVFLSDGF 249
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNM-------STVDNILFIYKSREAQL- 431
+ ++ ++V+D H+Y +FD + +++ S D I S + +
Sbjct: 250 LSTASWNGFKTG---EDVVMDTHHYEMFDNYLISLDIHGHVKSACDFGKQIKGSDKPVVV 306
Query: 432 -----------QALNNANGPLVFIGEWVNE------WNVTSGTQKDYQD--------FGS 466
+ LN P + GE+ N + T G+ D D F
Sbjct: 307 GEWSGAVTDCTKYLNGKGVPTRYQGEYANNPKYGDCGDKTQGSVADLSDQERADTRRFIE 366
Query: 467 AQLEVYNAASFGWAYWTLKND-RKHWDFE 494
AQL+ Y + GW +WT K + WD +
Sbjct: 367 AQLDAYEGKN-GWLFWTWKTEGAPGWDMQ 394
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q5B5X8|EXGA_EMENI Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 130/249 (52%), Gaps = 11/249 (4%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y L G E A L H NTFIT EDF + G+N VRIP+G+W A P P++
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAA-PLDGEPYV 117
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA++WA A+N+K I+DLH APGSQNG ++S R G W D + QT+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRR-GPIGWQQGDTVEQTILAF 176
Query: 322 DFLASRY-AKHPALLGIELLNEPSA-ATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
+ LA RY A + IE LNEP + D L YY++ VRK SP A +++
Sbjct: 177 ETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHDGF 236
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439
E + + N+++D H+Y +F+ S +I + LQA A+
Sbjct: 237 VQT---EGWNGFMTGENVMMDTHHYEVFEGGQNAWSIEKHIDAACQLGRQHLQA---ADK 290
Query: 440 PLVFIGEWV 448
P V +GEW
Sbjct: 291 P-VIVGEWT 298
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q7Z9L3|EXGA_ASPOR Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 11/250 (4%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G E A+ L H +F++ DF + G+N VRIP+G+W A P P++
Sbjct: 61 EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIGYW-ALGPLEGDPYV 119
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LD A+ WA A +K +IDLH APGSQNG ++S R G W D + QTLD
Sbjct: 120 DGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRR-GAIQWQQGDTVEQTLDAF 178
Query: 322 DFLASRYAKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380
D LA RY + IE +NEP+ V L YY Y IV KY+ V+
Sbjct: 179 DLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKYNAGTSVVYGDGF- 237
Query: 381 NADPLELYQA-NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439
P+E + +V+D H+Y++FD + M +I + + L+A +
Sbjct: 238 --LPVESWNGFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFAHQHLEASDKP-- 293
Query: 440 PLVFIGEWVN 449
V +GEW
Sbjct: 294 --VIVGEWTG 301
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B8N151|EXGA_ASPFN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 11/250 (4%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
++ L G E A+ L H +F++ DF + G+N VRIP+G+W A P P++
Sbjct: 61 EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIGYW-ALGPLEGDPYV 119
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LD A+ WA A +K +IDLH APGSQNG ++S R G W D + QTLD
Sbjct: 120 DGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRR-GAIQWQQGDTVEQTLDAF 178
Query: 322 DFLASRYAKHPALLGIELLNEPS-AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380
D LA RY + IE +NEP+ V L YY Y IV KY+ V+
Sbjct: 179 DLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKYNAGTSVVYGDGF- 237
Query: 381 NADPLELYQA-NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439
P+E + +V+D H+Y++FD + M +I + + L+A +
Sbjct: 238 --LPVESWNGFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFAHQHLEASDKP-- 293
Query: 440 PLVFIGEWVN 449
V +GEW
Sbjct: 294 --VIVGEWTG 301
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12700|EXG_SCHOC Glucan 1,3-beta-glucosidase OS=Schwanniomyces occidentalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 125/225 (55%), Gaps = 11/225 (4%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G + A++VL++H T+ DF + ++G+N VRIP+G+W AF P++
Sbjct: 78 EYHFTQKLGKDAAQQVLEQHWKTWYKENDFKMMLKYGLNAVRIPIGYW-AFKLLDYDPYV 136
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G ++ LD AL WA YN+K IDLH APGSQNG ++S RD + + + ++ TL+V+
Sbjct: 137 QGQVKYLDRALDWARKYNLKVWIDLHGAPGSQNGFDNSGLRD-SLGFQQGNNVNFTLEVL 195
Query: 322 DFLASRYAK---HPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378
+ + +Y ++GIELLNEP ++ L+ L +++QGYQ +R VI+
Sbjct: 196 EIIGKKYGGPEYEDVVIGIELLNEPLGPSLDLNYLKEFFQQGYQNLRNSGSVQAVIIQDA 255
Query: 379 IGNADPLELYQANIGLH---NIVVDLHYYNLFDTFFVNMSTVDNI 420
P+ + + L N+VVD H+Y +F + S D+I
Sbjct: 256 F---QPMGYWDNFLTLDQYWNVVVDHHHYQVFSAGELQRSIDDHI 297
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Schwanniomyces occidentalis (taxid: 27300) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 532 | ||||||
| 255585772 | 515 | conserved hypothetical protein [Ricinus | 0.960 | 0.992 | 0.808 | 0.0 | |
| 357463267 | 533 | Glucan 1,3-beta-glucosidase [Medicago tr | 1.0 | 0.998 | 0.776 | 0.0 | |
| 359480510 | 539 | PREDICTED: probable glucan 1,3-beta-gluc | 0.968 | 0.955 | 0.767 | 0.0 | |
| 297741840 | 592 | unnamed protein product [Vitis vinifera] | 0.996 | 0.895 | 0.760 | 0.0 | |
| 449451405 | 530 | PREDICTED: probable glucan 1,3-beta-gluc | 0.981 | 0.984 | 0.743 | 0.0 | |
| 224097198 | 494 | predicted protein [Populus trichocarpa] | 0.885 | 0.953 | 0.805 | 0.0 | |
| 242095140 | 539 | hypothetical protein SORBIDRAFT_10g00750 | 0.949 | 0.936 | 0.663 | 0.0 | |
| 357141656 | 538 | PREDICTED: probable glucan 1,3-beta-gluc | 0.956 | 0.946 | 0.633 | 0.0 | |
| 125561948 | 537 | hypothetical protein OsI_29647 [Oryza sa | 0.968 | 0.959 | 0.631 | 0.0 | |
| 42408166 | 532 | putative 1,3-beta glucanase [Oryza sativ | 0.919 | 0.919 | 0.649 | 0.0 |
| >gi|255585772|ref|XP_002533566.1| conserved hypothetical protein [Ricinus communis] gi|223526566|gb|EEF28823.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/517 (80%), Positives = 461/517 (89%), Gaps = 6/517 (1%)
Query: 17 CLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQVQIKSVTL 76
CLI VEGL +SKVRGVNLGGWLV+EGWIKPSLFDGI NGDMLDGT+VQ+KSV
Sbjct: 4 CLI-----QVEGLREDSKVRGVNLGGWLVVEGWIKPSLFDGIPNGDMLDGTEVQLKSVIS 58
Query: 77 EKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATA 136
+KY+ AE+GGG V+V RD ASSWETF LWR SE EFQ TSQGQFLTCDGEGC +SATA
Sbjct: 59 QKYLSAENGGGMGVTVDRDAASSWETFRLWRHSELEFQLHTSQGQFLTCDGEGCSISATA 118
Query: 137 KSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAATFEMAIVA 196
S S TF IERNN++RVHIKL SGTYLQA+ GNQL +DYPG PGWDDNAATFEM ++A
Sbjct: 119 NSSSAGTTFFIERNNNNRVHIKLNSGTYLQASTGNQLRADYPGKPGWDDNAATFEMTVIA 178
Query: 197 NNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDP 256
NNLHGDYQLANGYGH +AKE+LK+HRNT IT+EDF FL++HGINTVRIPVGWWIAFDPDP
Sbjct: 179 NNLHGDYQLANGYGHSKAKEILKKHRNTLITVEDFKFLFKHGINTVRIPVGWWIAFDPDP 238
Query: 257 PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPAS-DYIS 315
PAPFIGGSLEALDNA SWA+AY+I+CIIDLHAAPGSQNGMEHSASRDGTT WP S DYIS
Sbjct: 239 PAPFIGGSLEALDNAFSWAQAYDIRCIIDLHAAPGSQNGMEHSASRDGTTGWPTSADYIS 298
Query: 316 QTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV 375
QTL+VIDFLASRYA+HPALLGIELLNEPSAA+VPL++LVPYYKQGY+IVRKYSP AYVI+
Sbjct: 299 QTLNVIDFLASRYARHPALLGIELLNEPSAASVPLEVLVPYYKQGYEIVRKYSPNAYVII 358
Query: 376 CQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN 435
CQRIGNADPLELYQANIG HNIVVDLHYYNLFDTFFVNMS+ DNI FIYKSREAQLQALN
Sbjct: 359 CQRIGNADPLELYQANIGSHNIVVDLHYYNLFDTFFVNMSSEDNIQFIYKSREAQLQALN 418
Query: 436 NANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEW 495
+ANGPL+FIGEWVNEWNVTSG+Q DYQDFG AQLEVY+AASFGWAYWTLKNDRKHWDFEW
Sbjct: 419 SANGPLIFIGEWVNEWNVTSGSQTDYQDFGKAQLEVYDAASFGWAYWTLKNDRKHWDFEW 478
Query: 496 NIRNNYLQLGNSPNMQIFNSLVLLGIIFAWLYLHHIL 532
NIRN YLQ GNSP +IFN + LLG++ +LHH++
Sbjct: 479 NIRNRYLQFGNSPAKEIFNRVALLGLVSTCFFLHHLI 515
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357463267|ref|XP_003601915.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355490963|gb|AES72166.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/533 (77%), Positives = 462/533 (86%), Gaps = 1/533 (0%)
Query: 1 MDIVFSKWVFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILN 60
M +VF+KW F F L C I SI SV+GLHG SKVRGVNLGGWLVIEGWIKPSLFDGI N
Sbjct: 1 MGLVFTKWAFIFLLCCSCITSIVYSVDGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIAN 60
Query: 61 GDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQG 120
GDMLDGT+VQ+KSV L+KYV A++GGG +V+V RD SSWETF LWRVSESEFQFRT+QG
Sbjct: 61 GDMLDGTEVQLKSVKLQKYVSADNGGGMNVTVDRDAPSSWETFRLWRVSESEFQFRTNQG 120
Query: 121 QFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGM 180
FLTCDG GC VSATAKSPST E FE++RN ++VHIK+K G YLQAT GNQLT+DYPG+
Sbjct: 121 PFLTCDGGGCTVSATAKSPSTSEIFEVKRNEKNKVHIKIKDGPYLQATTGNQLTADYPGV 180
Query: 181 PGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGIN 240
PGWDDN+ATFEM IV+NNLHGDYQLANGYGHE A++VL+RHRN++IT+EDF FLY HGIN
Sbjct: 181 PGWDDNSATFEMTIVSNNLHGDYQLANGYGHESAEDVLRRHRNSYITVEDFKFLYEHGIN 240
Query: 241 TVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300
TVRIPVGWWIAFDPDPP+PFIGGSLEALDNA SWA+ Y+IKCIIDLHAAPGSQNGMEHSA
Sbjct: 241 TVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSA 300
Query: 301 SRDGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQ 359
SRDG T WP S DYIS++L VIDFL SRYAKHPALLGIELLNEPSA TV LDIL YYKQ
Sbjct: 301 SRDGFTGWPTSPDYISKSLHVIDFLISRYAKHPALLGIELLNEPSAGTVSLDILTSYYKQ 360
Query: 360 GYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDN 419
GYQIVRKYS +AYVI+CQRIGNADPLELYQA+IG N+V+DLH+YNLFDTFFVNMS DN
Sbjct: 361 GYQIVRKYSSSAYVIMCQRIGNADPLELYQADIGSTNLVLDLHFYNLFDTFFVNMSAGDN 420
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGW 479
+ +IYKSRE LQA NN+NGPL+F+GEWVNEW+VTSG+ DYQDFG AQL+VYN ASFGW
Sbjct: 421 VQYIYKSREGLLQAFNNSNGPLIFVGEWVNEWDVTSGSLTDYQDFGKAQLDVYNTASFGW 480
Query: 480 AYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIFAWLYLHHIL 532
YWTLKNDR HWDFEWNIRNNYLQLGNSPN Q ++L L G+ F YL H L
Sbjct: 481 CYWTLKNDRDHWDFEWNIRNNYLQLGNSPNNQNIHTLGLSGLAFTLFYLPHFL 533
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480510|ref|XP_002262875.2| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/533 (76%), Positives = 451/533 (84%), Gaps = 18/533 (3%)
Query: 1 MDIVFSKWVFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILN 60
M++VF KWVFAF L C LIFS SV+ + G KVRGVNLGGWLV+EGWIKPSLFDGI N
Sbjct: 24 MELVFRKWVFAFLLCCRLIFSY--SVDLVQGGEKVRGVNLGGWLVVEGWIKPSLFDGIPN 81
Query: 61 GDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQG 120
GDMLDGT+VQ KS+ SWETF LWRVS+SEFQFRTSQG
Sbjct: 82 GDMLDGTEVQFKSLX---------------XXXXXXXXSWETFRLWRVSDSEFQFRTSQG 126
Query: 121 QFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGM 180
QFL CDGEG VSA A S S ETF +ERN D+RVHIKLK+G YLQATL NQL++DYPGM
Sbjct: 127 QFLACDGEGGSVSAMAGSSSIKETFYVERNYDNRVHIKLKNGNYLQATLANQLSADYPGM 186
Query: 181 PGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGIN 240
PGWDDNAATFEM IVANN+HGDYQLANGYGH++AKEVLKRHRN+FITIEDF FLYRHGIN
Sbjct: 187 PGWDDNAATFEMTIVANNIHGDYQLANGYGHDKAKEVLKRHRNSFITIEDFIFLYRHGIN 246
Query: 241 TVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300
TVRIPVGWWIAFDP+PPAPFIGG+LEALDNA SWA+AYNI+CIIDLHAAPGSQNGMEHSA
Sbjct: 247 TVRIPVGWWIAFDPNPPAPFIGGTLEALDNAFSWAQAYNIRCIIDLHAAPGSQNGMEHSA 306
Query: 301 SRDGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQ 359
SRDG++ WP S YISQTLDVI+FLASRY KHP LLGIELLNEPSAA+V LD+LV YYKQ
Sbjct: 307 SRDGSSGWPTSASYISQTLDVIEFLASRYGKHPTLLGIELLNEPSAASVSLDLLVSYYKQ 366
Query: 360 GYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDN 419
GYQIVRKYS AYVIVCQRIG ADP EL+QA+IG +N+VVDLHYYNLFD FFVNM+ +DN
Sbjct: 367 GYQIVRKYSSEAYVIVCQRIGIADPSELFQADIGSYNLVVDLHYYNLFDNFFVNMNPLDN 426
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGW 479
I FIY SRE QL+ALN ANGPLVFIGEWVNEWNV + TQ DYQ+FG QLEVYNAASFGW
Sbjct: 427 IQFIYNSRETQLRALNRANGPLVFIGEWVNEWNVANATQMDYQNFGRTQLEVYNAASFGW 486
Query: 480 AYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIFAWLYLHHIL 532
AYWTLKNDRKHWDFEWNIRNNYLQLG+SPN Q+ NS VLLG++ +LYLHH++
Sbjct: 487 AYWTLKNDRKHWDFEWNIRNNYLQLGSSPNRQVSNSAVLLGLVCGYLYLHHMV 539
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297741840|emb|CBI33153.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/535 (76%), Positives = 454/535 (84%), Gaps = 5/535 (0%)
Query: 1 MDIVFSKWVFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILN 60
M++VF KWVFAF L C LIFS SV+ + G KVRGVNLGGWLV+EGWIKPSLFDGI N
Sbjct: 60 MELVFRKWVFAFLLCCRLIFSY--SVDLVQGGEKVRGVNLGGWLVVEGWIKPSLFDGIPN 117
Query: 61 GDMLDGTQVQIKSVTLEKYV-CAESGGGTDVSVTRDVASSWE-TFTLWRVSESEFQFRTS 118
GDMLDGT+VQ KS+ L + +S+ + S + LWRVS+SEFQFRTS
Sbjct: 118 GDMLDGTEVQFKSLILVPLLDNTHYHKLRQISIEVLLTSFFTCVLQLWRVSDSEFQFRTS 177
Query: 119 QGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYP 178
QGQFL CDGEG VSA A S S ETF +ERN D+RVHIKLK+G YLQATL NQL++DYP
Sbjct: 178 QGQFLACDGEGGSVSAMAGSSSIKETFYVERNYDNRVHIKLKNGNYLQATLANQLSADYP 237
Query: 179 GMPGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHG 238
GMPGWDDNAATFEM IVANN+HGDYQLANGYGH++AKEVLKRHRN+FITIEDF FLYRHG
Sbjct: 238 GMPGWDDNAATFEMTIVANNIHGDYQLANGYGHDKAKEVLKRHRNSFITIEDFIFLYRHG 297
Query: 239 INTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298
INTVRIPVGWWIAFDP+PPAPFIGG+LEALDNA SWA+AYNI+CIIDLHAAPGSQNGMEH
Sbjct: 298 INTVRIPVGWWIAFDPNPPAPFIGGTLEALDNAFSWAQAYNIRCIIDLHAAPGSQNGMEH 357
Query: 299 SASRDGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYY 357
SASRDG++ WP S YISQTLDVI+FLASRY KHP LLGIELLNEPSAA+V LD+LV YY
Sbjct: 358 SASRDGSSGWPTSASYISQTLDVIEFLASRYGKHPTLLGIELLNEPSAASVSLDLLVSYY 417
Query: 358 KQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTV 417
KQGYQIVRKYS AYVIVCQRIG ADP EL+QA+IG +N+VVDLHYYNLFD FFVNM+ +
Sbjct: 418 KQGYQIVRKYSSEAYVIVCQRIGIADPSELFQADIGSYNLVVDLHYYNLFDNFFVNMNPL 477
Query: 418 DNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASF 477
DNI FIY SRE QL+ALN ANGPLVFIGEWVNEWNV + TQ DYQ+FG QLEVYNAASF
Sbjct: 478 DNIQFIYNSRETQLRALNRANGPLVFIGEWVNEWNVANATQMDYQNFGRTQLEVYNAASF 537
Query: 478 GWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIFAWLYLHHIL 532
GWAYWTLKNDRKHWDFEWNIRNNYLQLG+SPN Q+ NS VLLG++ +LYLHH++
Sbjct: 538 GWAYWTLKNDRKHWDFEWNIRNNYLQLGSSPNRQVSNSAVLLGLVCGYLYLHHMV 592
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449451405|ref|XP_004143452.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 819 bits (2115), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/527 (74%), Positives = 446/527 (84%), Gaps = 5/527 (0%)
Query: 1 MDIVFSKWVFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILN 60
M++VF+KWV F L L+FS A SVEG+ G++KVRGVNLGGWLVIEGWIKPSLF+GI N
Sbjct: 1 MELVFTKWVLGFFLCSYLVFSKAYSVEGILGDNKVRGVNLGGWLVIEGWIKPSLFEGIPN 60
Query: 61 GDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQG 120
GDMLDG VQ++SVTL+K+V AE+GGGT V+V+RDVASSWETF LWRVS SEFQFRTS G
Sbjct: 61 GDMLDGAVVQLRSVTLQKFVSAENGGGTGVTVSRDVASSWETFRLWRVSASEFQFRTSLG 120
Query: 121 QFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGM 180
QFLTCDG C SA A+SP TF +ERN + RVH+KLK+G YLQA + NQLT+DY G
Sbjct: 121 QFLTCDGLEC--SAAAQSPRNSATFVVERNGN-RVHLKLKNGAYLQAMITNQLTADYLGK 177
Query: 181 PGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGIN 240
PGWDDNAATFEM IV+NNLHGDYQLANGYG + A VL+RHRN F+T++DF FLYRHGIN
Sbjct: 178 PGWDDNAATFEM-IVSNNLHGDYQLANGYGKDEATRVLQRHRNNFVTVDDFKFLYRHGIN 236
Query: 241 TVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300
TVRIPVGWWIAFDPDPPAPFIGGSLEALDNA SWA+AYN+ CIIDLHAAPGSQNGMEHS+
Sbjct: 237 TVRIPVGWWIAFDPDPPAPFIGGSLEALDNAFSWAQAYNLMCIIDLHAAPGSQNGMEHSS 296
Query: 301 SRDGTTDWPASD-YISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQ 359
S DGT WP S YIS+TLDVIDFLASRY KHPALLGIELLNEPSA VP D +V YYKQ
Sbjct: 297 SNDGTIGWPNSPAYISKTLDVIDFLASRYGKHPALLGIELLNEPSADLVPFDTVVSYYKQ 356
Query: 360 GYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDN 419
GY IVRKYS TAYVI+CQRIG ADP+ELYQAN+G HN+VVDLHYYNLFD FF ++S +N
Sbjct: 357 GYDIVRKYSSTAYVIICQRIGKADPMELYQANVGSHNLVVDLHYYNLFDPFFDHLSASEN 416
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGW 479
I IYK+R+ Q+QALN+ANGPLVF+GEW NEWNVT+ +Q DYQ+FG AQLEVYNAASFGW
Sbjct: 417 IEVIYKNRQTQIQALNSANGPLVFVGEWSNEWNVTNASQADYQNFGRAQLEVYNAASFGW 476
Query: 480 AYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIFAWL 526
YWTLKNDRKHWDFEWNI+NNYLQ G+SP+ IFN +L+ + W
Sbjct: 477 TYWTLKNDRKHWDFEWNIKNNYLQFGDSPSRVIFNCYLLVALACGWF 523
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224097198|ref|XP_002310872.1| predicted protein [Populus trichocarpa] gi|222853775|gb|EEE91322.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/474 (80%), Positives = 425/474 (89%), Gaps = 3/474 (0%)
Query: 35 VRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTR 94
VRGVNLGGWLVIEGWIKPSLFD I NGDMLDGT V+ SV+ KYV AE+GGG V+V R
Sbjct: 1 VRGVNLGGWLVIEGWIKPSLFDAIPNGDMLDGTGVRFMSVSSHKYVSAENGGGMGVTVYR 60
Query: 95 DVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSR 154
DVA SWETF LWRVS SEFQ RTSQG FL C GEGC +SATA SPS E F IERNN+++
Sbjct: 61 DVAFSWETFKLWRVSASEFQLRTSQGYFLACYGEGCSISATANSPSEGEIFYIERNNNNQ 120
Query: 155 VHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAATFEMAIVANNLHGDYQLANGYGHERA 214
VHIKL +G YLQ T+GN LT+DYPG PGWDDNAATFEM IVAN+LHGDYQLANGYG +A
Sbjct: 121 VHIKLITGAYLQVTVGNLLTADYPGKPGWDDNAATFEMMIVANDLHGDYQLANGYGRHQA 180
Query: 215 KEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSW 274
KEVLK+HRN+FIT++DF+FLYR GINTVRIPVGWWIAFDPDPPAPFIGG LEALDNA SW
Sbjct: 181 KEVLKKHRNSFITMDDFSFLYRCGINTVRIPVGWWIAFDPDPPAPFIGGCLEALDNAFSW 240
Query: 275 AE--AYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPAS-DYISQTLDVIDFLASRYAKH 331
A+ AYNIKC+IDLHAAPGSQNG EHSASRDGTT WP+S DY+S+TLDVIDFLASRYA+H
Sbjct: 241 AQQVAYNIKCVIDLHAAPGSQNGAEHSASRDGTTGWPSSPDYVSKTLDVIDFLASRYARH 300
Query: 332 PALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN 391
PALLGIELLNEPSA+ VP+++LVPYYKQGY+IVRKYS TAYVI+CQRIGNADP+ELYQAN
Sbjct: 301 PALLGIELLNEPSASLVPMEVLVPYYKQGYEIVRKYSSTAYVIICQRIGNADPIELYQAN 360
Query: 392 IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEW 451
I HN+VVDLH+YNLFD++FVNMST+DNI F+YKSR AQLQALN+ANGPLVF+GEWVNEW
Sbjct: 361 ISSHNLVVDLHFYNLFDSYFVNMSTMDNIDFVYKSRAAQLQALNSANGPLVFVGEWVNEW 420
Query: 452 NVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLG 505
+VT+ ++ DYQDFG AQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLG
Sbjct: 421 SVTTASETDYQDFGRAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLG 474
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242095140|ref|XP_002438060.1| hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] gi|241916283|gb|EER89427.1| hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/526 (66%), Positives = 410/526 (77%), Gaps = 21/526 (3%)
Query: 9 VFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDML---- 64
+F++ L C IFS V+GL SKVRGVNLGGWLVIEGWIKPSLFDGI NGDML
Sbjct: 11 LFSWVLFLCCIFS----VDGL---SKVRGVNLGGWLVIEGWIKPSLFDGIPNGDMLVGGL 63
Query: 65 ---------DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQF 115
DGTQVQI+SV L KYV A +GGG++V+V RDVAS+WETF LWRVS++EFQ
Sbjct: 64 ILVIHCVFLDGTQVQIRSVVLNKYVSAANGGGSNVTVDRDVASTWETFRLWRVSDNEFQL 123
Query: 116 RTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTS 175
R GQFLT + E ++ ATAK P + ETF IERN RVHI+ +G Y+QAT + L S
Sbjct: 124 RCLGGQFLTVNSEDGLILATAKHPLSTETFFIERN-AGRVHIRPLNGGYVQATNNHLLIS 182
Query: 176 DYPGMPGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLY 235
Y PGWD+N ATFE+ IVANNLHGDYQLANGYG E+AK VL+ HR +FIT DF+FL
Sbjct: 183 TYQFQPGWDNNLATFELVIVANNLHGDYQLANGYGSEKAKMVLEEHRRSFITANDFDFLS 242
Query: 236 RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNG 295
RHGINTVRIPVGWWI DP PP+PF+GGSL ALD A SWA++Y +KCIIDLHAAPGSQNG
Sbjct: 243 RHGINTVRIPVGWWITQDPYPPSPFVGGSLAALDLAFSWAQSYGLKCIIDLHAAPGSQNG 302
Query: 296 MEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVP 355
MEHSASRDG+ DWP+ +YISQTL+VIDFLA+RY HP+LLGIELLNEPSAATVPLD+LV
Sbjct: 303 MEHSASRDGSVDWPSPEYISQTLEVIDFLATRYGGHPSLLGIELLNEPSAATVPLDVLVS 362
Query: 356 YYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMS 415
YY +GYQIVR +S TAYVI+CQRIGNADP+EL+QA IGL N+VVDLHYYNLFD +F M+
Sbjct: 363 YYMRGYQIVRNHSSTAYVILCQRIGNADPIELFQAGIGLSNVVVDLHYYNLFDPYFATMN 422
Query: 416 TVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAA 475
+ NI F+YK R QLQ L NGPLVFIGEWVNEW+V + +Q +YQ FGSAQL+VY A
Sbjct: 423 SSQNIEFVYKMRAPQLQDLKAMNGPLVFIGEWVNEWDVQNASQYEYQKFGSAQLDVYANA 482
Query: 476 SFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGI 521
+FGW+YWTLKND HWDFEWNI+N YL S ++ + L+LL +
Sbjct: 483 TFGWSYWTLKNDMIHWDFEWNIQNKYLLFSGSSMLKTPSFLLLLAL 528
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357141656|ref|XP_003572302.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/532 (63%), Positives = 393/532 (73%), Gaps = 23/532 (4%)
Query: 9 VFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQ 68
V F C S + S + +KVR VNLGGWLV+EGWIKPSLFDGI NGDMLDGTQ
Sbjct: 8 VLVFCSLCVFQLSHSSSDDSF---TKVRAVNLGGWLVVEGWIKPSLFDGIPNGDMLDGTQ 64
Query: 69 VQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGE 128
VQ+KSV L+KYV A SGGG++V+V R SSWETF LWRVS+SEFQFR GQFLT
Sbjct: 65 VQLKSVALQKYVSAYSGGGSNVTVDRAATSSWETFKLWRVSDSEFQFRCFNGQFLTAS-N 123
Query: 129 GCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAA 188
G +SATA SP PETF IERNN + +HIKL +G YLQ + NQL S+Y PGW D+ A
Sbjct: 124 GDTISATADSPGDPETFYIERNN-TLLHIKLLNGNYLQVSNNNQLASNYHSQPGWGDDMA 182
Query: 189 TFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248
TFEM IVANNLHGDYQLANGYG +AK VL HR +F+T +DF FL R+ IN VRIPVGW
Sbjct: 183 TFEMTIVANNLHGDYQLANGYGPAQAKVVLTEHRKSFVTGKDFYFLSRNSINAVRIPVGW 242
Query: 249 WIAFDPDPPAPFIGGSLEALDNALSWA---------------EAYNIKCIIDLHAAPGSQ 293
WIA+DPDPPAPFIGGSL+ LD A WA Y +KCIIDLHAAPGSQ
Sbjct: 243 WIAYDPDPPAPFIGGSLDTLDRAFYWAHFETASSYGGTDFEIRVYGLKCIIDLHAAPGSQ 302
Query: 294 NGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDIL 353
NGMEHSASRDG+ DWP++ I +TL+VI+FLA RYA +P+LLGIELLNEPSA VPL L
Sbjct: 303 NGMEHSASRDGSVDWPSAANIKKTLEVINFLAQRYADNPSLLGIELLNEPSADGVPLGTL 362
Query: 354 VPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVN 413
V YYK GY+IVR YS TAYVI CQRIGNADP+ELYQA++G N VVDLHYYNLFD +F
Sbjct: 363 VSYYKAGYKIVRSYSETAYVIFCQRIGNADPVELYQADLGPTNTVVDLHYYNLFDPYFEK 422
Query: 414 MSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYN 473
++ +NI FIYK R Q+QAL+ ANGPLVFIGEWVNEWNV + +Q YQ FG AQLEV+
Sbjct: 423 LNATENIRFIYKDRLPQVQALSGANGPLVFIGEWVNEWNVANASQAQYQLFGKAQLEVFG 482
Query: 474 AASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGN---SPNMQIFNSLVLLGII 522
ASFGW+YWT++ + HWD+EWNIRN YL G+ SPN + + +L I+
Sbjct: 483 EASFGWSYWTVRCNSVHWDYEWNIRNRYLAGGSPLESPNYMMLVAGCVLYIL 534
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|125561948|gb|EAZ07396.1| hypothetical protein OsI_29647 [Oryza sativa Indica Group] gi|125603795|gb|EAZ43120.1| hypothetical protein OsJ_27710 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/538 (63%), Positives = 395/538 (73%), Gaps = 23/538 (4%)
Query: 9 VFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQ 68
V F L C S + S + +KVR VNLGGWLV+EGWIKPSLFDGI NGDMLDGTQ
Sbjct: 8 VLVFGLVCVFQLSHSSSDDDF---TKVRAVNLGGWLVVEGWIKPSLFDGISNGDMLDGTQ 64
Query: 69 VQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGE 128
VQ+KSV L+KY+ A GGG +++V +DVAS+WETF LWRVS E+QFR +GQFLT
Sbjct: 65 VQLKSVGLQKYLSANGGGGGNLTVDQDVASTWETFRLWRVSYREYQFRCIKGQFLTAS-N 123
Query: 129 GCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAA 188
G V+SATA SP E+F IERNN S +HIKL +G YLQ T NQLTS+YP PGWDD A
Sbjct: 124 GDVISATADSPGDTESFYIERNN-SMLHIKLLNGGYLQVTNNNQLTSNYPSQPGWDDGMA 182
Query: 189 TFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248
TFEM IVANNLHGDYQLANG G ++A VL HR FIT +DF FL ++GIN VRIPVGW
Sbjct: 183 TFEMTIVANNLHGDYQLANGLGPDQAMVVLTEHRKNFITGKDFYFLSKNGINAVRIPVGW 242
Query: 249 WIAFDPDPPAPFIGGSLEALDNALSWA--------------EAYNIKCIIDLHAAPGSQN 294
WIA+DP+PPAPF+ GSL+ LD A WA Y +KCIIDLHAAPGSQN
Sbjct: 243 WIAYDPNPPAPFVSGSLDTLDRAFYWAHFKSAQYGGSDFDIRIYGLKCIIDLHAAPGSQN 302
Query: 295 GMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILV 354
GMEHSASRDG+ DWP+ I +TLDVI+FLA RYA +P+LLGIELLNEPSA VPL LV
Sbjct: 303 GMEHSASRDGSVDWPSPANIEKTLDVINFLAQRYANNPSLLGIELLNEPSAGAVPLGTLV 362
Query: 355 PYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNM 414
YYK GYQIVR YS AYVI CQRIGNADP+ELYQA++G N VVDLHYYNLFD FF +
Sbjct: 363 SYYKTGYQIVRSYSDKAYVIFCQRIGNADPMELYQADLGPTNTVVDLHYYNLFDPFFEKL 422
Query: 415 STVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA 474
+ +NI FIY +R Q+QAL+ ANGPLVFIGEWVNEWNVT +Q +YQ FG AQLEVY
Sbjct: 423 NATENIQFIYNNRMPQVQALDKANGPLVFIGEWVNEWNVTDASQTEYQLFGKAQLEVYGE 482
Query: 475 ASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIFAWLYLHHIL 532
ASFGW+YWT++ + HWD+EWN RN YL +G SP L++ G + LYL IL
Sbjct: 483 ASFGWSYWTVRCNSVHWDYEWNKRNRYL-IGGSPLESPKYMLLVAGCL---LYLLFIL 536
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42408166|dbj|BAD09304.1| putative 1,3-beta glucanase [Oryza sativa Japonica Group] gi|42409390|dbj|BAD10703.1| putative 1,3-beta glucanase [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/508 (64%), Positives = 381/508 (75%), Gaps = 19/508 (3%)
Query: 9 VFAFSLSCCLIFSIAPSVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQ 68
V F L C S + S + +KVR VNLGGWLV+EGWIKPSLFDGI NGDMLDGTQ
Sbjct: 8 VLVFGLVCVFQLSHSSSDDDF---TKVRAVNLGGWLVVEGWIKPSLFDGISNGDMLDGTQ 64
Query: 69 VQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGE 128
VQ+KSV L+KY+ A GGG +++V +DVAS+WETF LWRVS E+QFR +GQFLT
Sbjct: 65 VQLKSVGLQKYLSANGGGGGNLTVDQDVASTWETFRLWRVSYREYQFRCIKGQFLTAS-N 123
Query: 129 GCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAA 188
G V+SATA SP E+F IERNN S +HIKL +G YLQ T NQLTS+YP PGWDD A
Sbjct: 124 GDVISATADSPGDTESFYIERNN-SMLHIKLLNGGYLQVTNNNQLTSNYPSQPGWDDGMA 182
Query: 189 TFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248
TFEM IVANNLHGDYQLANG G ++A VL HR FIT +DF FL ++GIN VRIPVGW
Sbjct: 183 TFEMTIVANNLHGDYQLANGLGPDQAMVVLTEHRKNFITGKDFYFLSKNGINAVRIPVGW 242
Query: 249 WIAFDPDPPAPFIGGSLEALDNALSWA--------------EAYNIKCIIDLHAAPGSQN 294
WIA+DP+PPAPF+ GSL+ LD A WA Y +KCIIDLHAAPGSQN
Sbjct: 243 WIAYDPNPPAPFVSGSLDTLDRAFYWAHFKSAQYGGSDFDIRIYGLKCIIDLHAAPGSQN 302
Query: 295 GMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILV 354
GMEHSASRDG+ DWP+ I +TLDVI+FLA RYA +P+LLGIELLNEPSA VPL LV
Sbjct: 303 GMEHSASRDGSVDWPSPANIEKTLDVINFLAQRYANNPSLLGIELLNEPSAGAVPLGTLV 362
Query: 355 PYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNM 414
YYK GYQIVR YS AYVI CQRIGNADP+ELYQA++G N VVDLHYYNLFD FF +
Sbjct: 363 SYYKTGYQIVRSYSDKAYVIFCQRIGNADPMELYQADLGPTNTVVDLHYYNLFDPFFEKL 422
Query: 415 STVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA 474
+ +NI FIY +R Q+QAL+ ANGPLVFIGEWVNEWNVT +Q +YQ FG AQLEVY
Sbjct: 423 NATENIQFIYNNRMPQVQALDKANGPLVFIGEWVNEWNVTDASQTEYQLFGKAQLEVYGE 482
Query: 475 ASFGWAYWTLKNDRKHWDFEWNIRNNYL 502
ASFGW+YWT++ + HWD+EWN RN YL
Sbjct: 483 ASFGWSYWTVRCNSVHWDYEWNKRNRYL 510
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 532 | ||||||
| ASPGD|ASPL0000016384 | 405 | exgC [Emericella nidulans (tax | 0.445 | 0.585 | 0.366 | 2.7e-49 | |
| POMBASE|SPBC1105.05 | 407 | exg1 "glucan 1,6-beta-glucosid | 0.372 | 0.486 | 0.339 | 2e-41 | |
| CGD|CAL0006153 | 438 | XOG1 [Candida albicans (taxid: | 0.404 | 0.490 | 0.346 | 1.3e-30 | |
| UNIPROTKB|P29717 | 438 | XOG1 "Glucan 1,3-beta-glucosid | 0.404 | 0.490 | 0.346 | 1.3e-30 | |
| CGD|CAL0006247 | 525 | SPR1 [Candida albicans (taxid: | 0.454 | 0.460 | 0.25 | 1.4e-23 | |
| UNIPROTKB|Q59Z61 | 525 | SPR1 "Putative uncharacterized | 0.454 | 0.460 | 0.25 | 1.4e-23 | |
| CGD|CAL0006050 | 479 | EXG2 [Candida albicans (taxid: | 0.295 | 0.327 | 0.313 | 2.2e-22 | |
| UNIPROTKB|Q5AIA1 | 479 | EXG2 "Putative uncharacterized | 0.295 | 0.327 | 0.313 | 2.2e-22 | |
| SGD|S000005716 | 445 | SPR1 "Sporulation-specific exo | 0.377 | 0.451 | 0.328 | 3.1e-21 | |
| POMBASE|SPBC2D10.05 | 464 | exg3 "glucan 1,3-beta-glucosid | 0.509 | 0.584 | 0.274 | 1e-20 |
| ASPGD|ASPL0000016384 exgC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 374 (136.7 bits), Expect = 2.7e-49, Sum P(3) = 2.7e-49
Identities = 91/248 (36%), Positives = 132/248 (53%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y L G E A L H NTFIT EDF + G+N VRIP+G+W A D P++
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAAPLDGE-PYV 117
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G LE LDNA++WA A+N+K I+DLH APGSQNG ++S R G W D + QT+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRR-GPIGWQQGDTVEQTILAF 176
Query: 322 DFLASRY-AKHPALLGIELLNEPSA-ATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
+ LA RY A + IE LNEP + D L YY++ VRK SP A +++
Sbjct: 177 ETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHDGF 236
Query: 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439
+ + N+++D H+Y +F+ N +++ I + + Q L A+
Sbjct: 237 VQTEGWNGFMTG---ENVMMDTHHYEVFEGG-QNAWSIEK--HIDAACQLGRQHLQAADK 290
Query: 440 PLVFIGEW 447
P++ +GEW
Sbjct: 291 PVI-VGEW 297
|
|
| POMBASE|SPBC1105.05 exg1 "glucan 1,6-beta-glucosidase Exg1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 324 (119.1 bits), Expect = 2.0e-41, Sum P(3) = 2.0e-41
Identities = 69/203 (33%), Positives = 112/203 (55%)
Query: 210 GHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALD 269
G + A L H ++F T DF + G+N +RIP+G+W AF+ P++ G LD
Sbjct: 80 GADEAASQLAAHYSSFYTESDFATIASWGVNVLRIPIGYW-AFNVVDGEPYVQGQEYWLD 138
Query: 270 NALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYA 329
AL+WAE Y +K IDLH PGSQNG E+S + G+ W +D +++TLD+I ++A++Y
Sbjct: 139 QALTWAEQYGLKVWIDLHGVPGSQNGFENSG-KTGSIGWQQNDTVTRTLDIITYVANKYT 197
Query: 330 KHP---ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLE 386
+ ++GIE +NEP + +D L Y Y IV S + I+ + +
Sbjct: 198 QSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSSVATIIHDAYVDLSIWD 257
Query: 387 LYQANIGLHNIVVDLHYYNLFDT 409
+ +N+V+D+H Y L+++
Sbjct: 258 YGVVSPSSYNLVMDVHRYQLYES 280
|
|
| CGD|CAL0006153 XOG1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 316 (116.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 78/225 (34%), Positives = 123/225 (54%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G E A +L++H +T+IT +DF + G+N VRIP+G+W AF P++
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G ++ L+ AL WA NI+ IDLH APGSQNG ++S RD + ++ D TL+V+
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRD-SYNFQNGDNTQVTLNVL 206
Query: 322 DFLASRYAKHP---ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV--- 375
+ + +Y + ++GIELLNEP + +D L ++ GY +R+ VI+
Sbjct: 207 NTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDA 266
Query: 376 CQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNI 420
Q G + L A G N+VVD H+Y +F ++ + D+I
Sbjct: 267 FQVFGYWNNF-LTVAE-GQWNVVVDHHHYQVFSGGELSRNINDHI 309
|
|
| UNIPROTKB|P29717 XOG1 "Glucan 1,3-beta-glucosidase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 316 (116.3 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 78/225 (34%), Positives = 123/225 (54%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G E A +L++H +T+IT +DF + G+N VRIP+G+W AF P++
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G ++ L+ AL WA NI+ IDLH APGSQNG ++S RD + ++ D TL+V+
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRD-SYNFQNGDNTQVTLNVL 206
Query: 322 DFLASRYAKHP---ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV--- 375
+ + +Y + ++GIELLNEP + +D L ++ GY +R+ VI+
Sbjct: 207 NTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDA 266
Query: 376 CQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNI 420
Q G + L A G N+VVD H+Y +F ++ + D+I
Sbjct: 267 FQVFGYWNNF-LTVAE-GQWNVVVDHHHYQVFSGGELSRNINDHI 309
|
|
| CGD|CAL0006247 SPR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 233 (87.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 65/260 (25%), Positives = 129/260 (49%)
Query: 218 LKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEA 277
L+ H + F DF + + +N +RIP+G+W AF+ P P+I G + LD A+ WA
Sbjct: 121 LQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDPYIQGQEKYLDIAIEWATK 179
Query: 278 YNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDY-ISQTLDVIDFLASRYAKHPALLG 336
YN+ I +H PGSQNG ++S T W ++ ++ T ++D++ ++Y H +
Sbjct: 180 YNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTYRLVDYILNKYGNHTTIHS 239
Query: 337 IELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHN 396
I+L+NEP + + L +Y + + + + A +++ N +E ++ G
Sbjct: 240 IQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDAFFN---IESWKNFPG--E 294
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQA-----LNNANGPLVFIGEWVNEW 451
++D H Y +F + ++++ ++ I E+ +++ + +G L +++N
Sbjct: 295 FILDHHLYEVFSQWQIDLNLQQHLQSIKHQGESIVKSGHRSIVGEFSGALTDCAKYLN-- 352
Query: 452 NVTSGTQKDYQDFGSAQLEV 471
V G++ D GS E+
Sbjct: 353 GVGKGSRWD----GSGDFEI 368
|
|
| UNIPROTKB|Q59Z61 SPR1 "Putative uncharacterized protein SPR1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 233 (87.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 65/260 (25%), Positives = 129/260 (49%)
Query: 218 LKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEA 277
L+ H + F DF + + +N +RIP+G+W AF+ P P+I G + LD A+ WA
Sbjct: 121 LQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDPYIQGQEKYLDIAIEWATK 179
Query: 278 YNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDY-ISQTLDVIDFLASRYAKHPALLG 336
YN+ I +H PGSQNG ++S T W ++ ++ T ++D++ ++Y H +
Sbjct: 180 YNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTYRLVDYILNKYGNHTTIHS 239
Query: 337 IELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHN 396
I+L+NEP + + L +Y + + + + A +++ N +E ++ G
Sbjct: 240 IQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDAFFN---IESWKNFPG--E 294
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQA-----LNNANGPLVFIGEWVNEW 451
++D H Y +F + ++++ ++ I E+ +++ + +G L +++N
Sbjct: 295 FILDHHLYEVFSQWQIDLNLQQHLQSIKHQGESIVKSGHRSIVGEFSGALTDCAKYLN-- 352
Query: 452 NVTSGTQKDYQDFGSAQLEV 471
V G++ D GS E+
Sbjct: 353 GVGKGSRWD----GSGDFEI 368
|
|
| CGD|CAL0006050 EXG2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 235 (87.8 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 53/169 (31%), Positives = 92/169 (54%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G + A++ L H + DF + G+N VRIP+G+W +F+ P++
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWP-ASDYISQTLD 319
G+ + LD A+ W+ A ++K +IDLH AP +QNG ++S R+ G W ++Y++ T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 320 VIDFLASRYA--KHPA-----LLGIELLNEPSAATVPLDILVPYYKQGY 361
V+ + +Y K+ + ++GIE+LNEP +D L +Y + Y
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESY 244
|
|
| UNIPROTKB|Q5AIA1 EXG2 "Putative uncharacterized protein EXG2" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 235 (87.8 bits), Expect = 2.2e-22, Sum P(3) = 2.2e-22
Identities = 53/169 (31%), Positives = 92/169 (54%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G + A++ L H + DF + G+N VRIP+G+W +F+ P++
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWP-ASDYISQTLD 319
G+ + LD A+ W+ A ++K +IDLH AP +QNG ++S R+ G W ++Y++ T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 320 VIDFLASRYA--KHPA-----LLGIELLNEPSAATVPLDILVPYYKQGY 361
V+ + +Y K+ + ++GIE+LNEP +D L +Y + Y
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESY 244
|
|
| SGD|S000005716 SPR1 "Sporulation-specific exo-1,3-beta-glucanase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 273 (101.2 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 71/216 (32%), Positives = 110/216 (50%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G+E+AKE L H +TF EDF + G N VRIP+G+W AF P++
Sbjct: 91 EYHFCEKLGYEKAKERLYSHWSTFYKEEDFAKIASQGFNLVRIPIGYW-AFTTLSHDPYV 149
Query: 262 GGSLEA-LDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDV 320
E LD A+ WA Y +K IDLH A GSQNG ++S RD + + + +S T+
Sbjct: 150 TAEQEYFLDRAIDWARKYGLKVWIDLHGAAGSQNGFDNSGLRD-SYKFLEDENLSATMKA 208
Query: 321 IDFLASRYAKHPAL---LGIELLNEPSAATVPLDILVPYY-KQGYQIVRKYSPTAYVIVC 376
+ ++ S+Y+ L +GIELLNEP + ++ L K Y +R + +IV
Sbjct: 209 LTYILSKYSTDVYLDTVIGIELLNEPLGPVIDMERLKNLLLKPAYDYLRNKINSNQIIV- 267
Query: 377 QRIGNA-DPLELYQANIG----LHNIVVDLHYYNLF 407
I +A P + + + +++D H+Y +F
Sbjct: 268 --IHDAFQPYHYWDGFLNDEKNEYGVIIDHHHYQVF 301
|
|
| POMBASE|SPBC2D10.05 exg3 "glucan 1,3-beta-glucosidase Exg3" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 244 (91.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 84/306 (27%), Positives = 137/306 (44%)
Query: 209 YGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWW-IAFD------P-DPPAPF 260
+G ++A+E + H ++I IEDF+++ +H +N+VRIP+G+W + D P +P A
Sbjct: 52 HGIDKARENFEAHWKSWIGIEDFSYMKQHLVNSVRIPLGYWSLGNDELVKGTPFEPYAEV 111
Query: 261 IGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD-WPASDYISQTLD 319
SL L + A + +I ++D H G N HS + G + + +Y +T++
Sbjct: 112 YRNSLHILCEKIQEAGSLSIGVLLDFHGVYGGGNCDGHSGTSSGKAEFYEKQEYQDRTVE 171
Query: 320 VIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379
+ FL+S+ + ++GI+++NEP D+L +Y++ +V Y P Y I
Sbjct: 172 AVKFLSSKIGQFENVIGIQVINEPIWGQY--DVLANFYQKARSVVPSYLPV-Y------I 222
Query: 380 GNADPLELYQANIGLHN----IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN 435
G+ + + + H VVD H Y F + + E L+
Sbjct: 223 GDGWDKDHWVNWVNDHESEGFYVVDHHSYFCFGGELCHAPPKLITRRLDTGEEYGKTKLS 282
Query: 436 NANGPLVFIGEWV-----NEWNVTSGTQKDYQDFGSAQLEVY-N--AASFGWAYWTLKND 487
N + IGEW W+ T K +DFG AQL Y N F W Y L
Sbjct: 283 N-----IVIGEWSCTLSQESWSQTKLHDKRRRDFGEAQLNQYLNYCGGCFFWTYKFLHGK 337
Query: 488 RKHWDF 493
WDF
Sbjct: 338 GGDWDF 343
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 532 | |||
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 1e-22 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 2e-22 | |
| cd00257 | 119 | cd00257, Fascin, Fascin-like domain; members inclu | 2e-12 | |
| cd00257 | 119 | cd00257, Fascin, Fascin-like domain; members inclu | 3e-05 | |
| pfam06268 | 108 | pfam06268, Fascin, Fascin domain | 2e-04 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 1e-22
Identities = 76/340 (22%), Positives = 127/340 (37%), Gaps = 37/340 (10%)
Query: 198 NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWI--AFDPD 255
L G G+ A+ +L+ H FIT EDF+ + G N VRIP+G+W A D D
Sbjct: 46 QLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWALQATDGD 105
Query: 256 PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYIS 315
P L+ LD A++WA+ I +IDLH PG NG EHS + ++ +
Sbjct: 106 NPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE--ENENVE 163
Query: 316 QTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LDILVPYYKQGYQIVRKYSPTAY 372
T+D+ F+A+R+ + ++G EL+NEP+ Y + +P
Sbjct: 164 ATIDIWKFIANRFKNYDTVIGFELINEPNGIVTSETWNGGDDEAYDVVRNAILSNAPHWL 223
Query: 373 VIV---CQRIGNADPLELY-QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNI-LFIYKSR 427
+ V Y ++ G N V + + T ++ +
Sbjct: 224 IRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYGDDVLNGG 283
Query: 428 EA---------------QLQALNN---ANGPLVFIGEWVNEWNVTSGTQKD-----YQDF 464
L + + NG IGE+ +N + +D + +
Sbjct: 284 SWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDERKDNVKVY 343
Query: 465 GSAQLEVYNAASFGWAYWTLK-NDRKHWDFEWNIRNNYLQ 503
QL+V++ W + +D E +I
Sbjct: 344 LENQLDVFDTT-TYWINNPWSGGNDTGYDIEDDINLGLFP 382
|
Length = 407 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 96.3 bits (240), Expect = 2e-22
Identities = 55/271 (20%), Positives = 92/271 (33%), Gaps = 27/271 (9%)
Query: 223 NTFITIEDFNFLYRH-GINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK 281
N + T + L + G N VR+PV W +P L +D + +A +
Sbjct: 19 NPYYTTKAMIDLVKDWGFNVVRLPVSWGGYVPNNPDYLIDENWLNRVDEVVDYAIDNGMY 78
Query: 282 CIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN 341
IID H + + + A + + +A+RY +P + EL+N
Sbjct: 79 VIIDWHHDTWPGDPNGNIDT--------AKAFFK---KLWTQIATRYGNNP-NVIFELMN 126
Query: 342 EP--SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN-IGLHNIV 398
EP D + Y ++ +R P +IV + +P + N++
Sbjct: 127 EPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWSQNPDGAALNDPNDDDNLI 186
Query: 399 VDLHYYNLFDTFFVNMSTVDNILFIYKS--REAQLQALNNANGPLVFIGEWVNEWNVTSG 456
+H+Y + F R A AL+ NG VFIGE+
Sbjct: 187 YSVHFYA--PSHFSGTWFGCEDKTNLAQRLRAAANYALD--NGIPVFIGEF-----GGGN 237
Query: 457 TQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487
+D L+ W W+ N
Sbjct: 238 ADGPCRDEAEKWLDYLKENGISWTGWSNGNK 268
|
Length = 269 |
| >gnl|CDD|238160 cd00257, Fascin, Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 2e-12
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCD 126
QV ++SV +Y+ AE+GG V RD ETFTL + ++ R+ G++L+ D
Sbjct: 2 PQVVLRSVN-GRYLSAEAGGDK-VDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSAD 59
Query: 127 GEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSD 176
+G V + F +E + D + ++ ++G YL L +
Sbjct: 60 SDGGVQLEGHPNADC--RFTLEFHGDGKWALRAENGRYLGGDGSGTLKAS 107
|
Length = 119 |
| >gnl|CDD|238160 cd00257, Fascin, Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 3e-05
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 115 FRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLT 174
R+ G++L+ + G V A S ETF +E +N + ++ G YL A +
Sbjct: 6 LRSVNGRYLSAEAGGDKVDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSDGGVQ 65
Query: 175 SDYPGMP 181
+
Sbjct: 66 LEGHPNA 72
|
Length = 119 |
| >gnl|CDD|203418 pfam06268, Fascin, Fascin domain | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 2e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 KYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAK 137
Y+ A G ++ R+ S+ + FTL ++ + R+ G++L+ D +G VVS
Sbjct: 3 GYLVARKRGAH-LNANRESESAVQLFTL-EFNDGSYSLRSHDGKYLSADSDGRVVSEAET 60
Query: 138 SPSTPETFEIE 148
SP T FE+E
Sbjct: 61 SPDT--RFELE 69
|
This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven. Members of this family are histidine rich, typically contain the repeated motif of HHXH. Length = 108 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 532 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.95 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.84 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.74 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 99.73 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.72 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 99.68 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.67 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 99.51 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 99.5 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 99.49 | |
| PLN02849 | 503 | beta-glucosidase | 99.48 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 99.47 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.47 | |
| PLN02814 | 504 | beta-glucosidase | 99.46 | |
| PLN02998 | 497 | beta-glucosidase | 99.46 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 99.45 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 99.44 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 99.39 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.34 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.26 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 99.24 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.17 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.15 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 99.06 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 99.04 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.96 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.92 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.7 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 98.7 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 98.63 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.49 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 98.49 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.47 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.29 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.29 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.19 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 98.06 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 97.93 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 97.81 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 97.62 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 97.57 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 97.48 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 97.41 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 97.35 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 97.13 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 97.12 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 96.9 | |
| PF07468 | 153 | Agglutinin: Agglutinin; InterPro: IPR008998 Agglut | 96.74 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 96.53 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 96.26 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.25 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 96.15 | |
| smart00791 | 139 | Agglutinin Amaranthus caudatus agglutinin or amara | 96.11 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 95.81 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 95.8 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 95.78 | |
| PF00167 | 122 | FGF: Fibroblast growth factor; InterPro: IPR002348 | 95.76 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 95.73 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 95.7 | |
| PLN00197 | 573 | beta-amylase; Provisional | 95.66 | |
| PLN02161 | 531 | beta-amylase | 95.62 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 95.61 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 95.59 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 95.56 | |
| PLN02801 | 517 | beta-amylase | 95.54 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 95.53 | |
| PLN02803 | 548 | beta-amylase | 95.44 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 95.34 | |
| PLN02705 | 681 | beta-amylase | 95.26 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 95.25 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 95.13 | |
| PLN02960 | 897 | alpha-amylase | 95.09 | |
| PLN02905 | 702 | beta-amylase | 95.08 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 94.99 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 94.98 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 94.88 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 94.84 | |
| PF00167 | 122 | FGF: Fibroblast growth factor; InterPro: IPR002348 | 94.54 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 94.51 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 94.03 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 93.84 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 93.8 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 93.75 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 93.63 | |
| COG3623 | 287 | SgaU Putative L-xylulose-5-phosphate 3-epimerase [ | 93.6 | |
| smart00791 | 139 | Agglutinin Amaranthus caudatus agglutinin or amara | 93.43 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 93.28 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 93.24 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 92.59 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 92.42 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 92.32 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 92.21 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 91.68 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 91.35 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 91.28 | |
| cd00058 | 123 | FGF Acidic and basic fibroblast growth factor fami | 91.16 | |
| PF07468 | 153 | Agglutinin: Agglutinin; InterPro: IPR008998 Agglut | 91.08 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 91.02 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 90.97 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 90.95 | |
| KOG2566 | 518 | consensus Beta-glucocerebrosidase [Carbohydrate tr | 90.31 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 90.05 | |
| PLN02361 | 401 | alpha-amylase | 90.02 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 89.79 | |
| smart00442 | 126 | FGF Acidic and basic fibroblast growth factor fami | 89.6 | |
| PRK05904 | 353 | coproporphyrinogen III oxidase; Provisional | 89.16 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 88.8 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 88.43 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 87.77 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 87.62 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 87.35 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 87.04 | |
| cd00058 | 123 | FGF Acidic and basic fibroblast growth factor fami | 86.91 | |
| COG3664 | 428 | XynB Beta-xylosidase [Carbohydrate transport and m | 86.72 | |
| smart00442 | 126 | FGF Acidic and basic fibroblast growth factor fami | 86.69 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 86.15 | |
| PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 86.04 | |
| PRK05628 | 375 | coproporphyrinogen III oxidase; Validated | 84.8 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 84.57 | |
| PRK08208 | 430 | coproporphyrinogen III oxidase; Validated | 84.29 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 83.8 | |
| PRK05660 | 378 | HemN family oxidoreductase; Provisional | 83.78 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 83.73 | |
| PLN02784 | 894 | alpha-amylase | 83.68 | |
| TIGR00539 | 360 | hemN_rel putative oxygen-independent coproporphyri | 83.3 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 81.65 | |
| PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 81.38 | |
| PRK08446 | 350 | coproporphyrinogen III oxidase; Provisional | 81.08 | |
| PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 81.03 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 80.93 | |
| PRK09249 | 453 | coproporphyrinogen III oxidase; Provisional | 80.37 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=289.46 Aligned_cols=253 Identities=30% Similarity=0.404 Sum_probs=183.2
Q ss_pred hcccc-CCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTF-ITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~-ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
||.+. +++++|+.|+++|+|+|||||.|....++.++..+++..+++||++|++|+++||+||||+|..|+..+..
T Consensus 16 ~w~~~~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w~~~~--- 92 (281)
T PF00150_consen 16 HWYNPSITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPGWANGG--- 92 (281)
T ss_dssp TTSGGGSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTTCSSST---
T ss_pred ccCCCCCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCccccccc---
Confidence 35543 88999999999999999999998666656665567788999999999999999999999999986542211
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC-------cccHHHHHHHHHHHHHhhCCCcE
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP-------LDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~-------~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
......+...+.+.++|+.|++||++++.+++|||+|||...... .+.+.+++++++++||+++|+++
T Consensus 93 -----~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~ 167 (281)
T PF00150_consen 93 -----DGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHL 167 (281)
T ss_dssp -----STTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSE
T ss_pred -----cccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcce
Confidence 111122456777889999999999999999999999999985322 26789999999999999999999
Q ss_pred EEEeCC-CCCCCchh-hhhcc-CCCCcEEEEeeecccCCCccccC-ChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccC
Q 009560 373 VIVCQR-IGNADPLE-LYQAN-IGLHNIVVDLHYYNLFDTFFVNM-STVDNILFIYKSREAQLQALNNANGPLVFIGEWV 448 (532)
Q Consensus 373 Viv~~~-~~~~~~~~-~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~-~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG 448 (532)
|++++. |+ .+... ....| ....++++++|+|.++....... ........+...+...... ....+.||+|||||
T Consensus 168 i~~~~~~~~-~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~pv~~gE~G 245 (281)
T PF00150_consen 168 IIVGGGGWG-ADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALNW-AKKNGKPVVVGEFG 245 (281)
T ss_dssp EEEEEHHHH-TBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHHH-HHHTTSEEEEEEEE
T ss_pred eecCCCccc-cccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHHH-HHHcCCeEEEeCcC
Confidence 999863 32 23222 23333 24789999999999865321111 1122223333333333333 34567899999999
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 449 NEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 449 ~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
..... +. ....+..+.++.+++.++||+||+|+.+
T Consensus 246 ~~~~~-~~---~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 280 (281)
T PF00150_consen 246 WSNND-GN---GSTDYADAWLDYLEQNGIGWIYWSWKPN 280 (281)
T ss_dssp SSTTT-SC---HHHHHHHHHHHHHHHTTCEEEECEESSS
T ss_pred CcCCC-CC---cCHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 86321 11 3344555557888889999999999974
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.08 Aligned_cols=301 Identities=24% Similarity=0.379 Sum_probs=208.3
Q ss_pred CCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCC-CCCCC--cChHHHHHHHHHH
Q 009560 198 NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDP-PAPFI--GGSLEALDNALSW 274 (532)
Q Consensus 198 ~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~-~~~~~--~~~l~~Ld~~v~~ 274 (532)
.+.++...+..+|...+....+.||.+++++++|..||++|||+||||++||.+ .+.+ ..|+. ...+.+|+++|++
T Consensus 46 ~~~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~-~~~~~~~p~~~~~~~~~~ld~~I~~ 124 (407)
T COG2730 46 QLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWAL-QATDGDNPYLIGLTQLKILDEAINW 124 (407)
T ss_pred eeecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhh-hccCCCCCCeecchHHHHHHHHHHH
Confidence 345566677788888899999999999999999999999999999999999986 3322 23443 3567799999999
Q ss_pred HHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHH
Q 009560 275 AEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILV 354 (532)
Q Consensus 275 a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~ 354 (532)
|+++||+|+||+|.+||++++.++++....... ..++.+++++.|++++.||++.+.|+++|++|||+. -...+.|.
T Consensus 125 a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~--~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~-~~~~~~w~ 201 (407)
T COG2730 125 AKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE--ENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG-IVTSETWN 201 (407)
T ss_pred HHhcCeeEEEEecccCCCCCCcCcccccccccc--cchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc-cCCccccc
Confidence 999999999999999999999999986654443 568899999999999999999999999999999996 12234455
Q ss_pred HHHHHHHHHHH-hhCCCc---EEEEeCC-CCC---CCchhhh-----------hccCCCCcEEEEeeecccCCCc-----
Q 009560 355 PYYKQGYQIVR-KYSPTA---YVIVCQR-IGN---ADPLELY-----------QANIGLHNIVVDLHYYNLFDTF----- 410 (532)
Q Consensus 355 ~~~~~~~~aIR-~~~~~~---~Viv~~~-~~~---~~~~~~~-----------~~~~~~~nvv~s~H~Y~~f~~~----- 410 (532)
.....+++.|| +....+ +|.+++. ... .....+. ..+..++++....|.|.++...
T Consensus 202 ~~~~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 281 (407)
T COG2730 202 GGDDEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYGDDVLN 281 (407)
T ss_pred cchHHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCceeeeccchhhhccceeccceeecchhhc
Confidence 44467777775 444444 3334322 111 0000000 0111122233444444443211
Q ss_pred ---cccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC-C----CCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 009560 411 ---FVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN-V----TSGTQKDYQDFGSAQLEVYNAASFGWAYW 482 (532)
Q Consensus 411 ---~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~-~----~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW 482 (532)
+............+..+...+....+..+.|+++||||..++ . .....+..+.+.+.+.+++.. ..+|.+|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ge~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~~ 360 (407)
T COG2730 282 GGSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDERKDNVKVYLENQLDVFDT-TTYWINN 360 (407)
T ss_pred CCCCCccCCcccccccceeeecceeecccccceeeeeccccCccccCCCCccchhhHHHHHHhhhhhhhccc-eeEEEee
Confidence 110000111112222222334333446788999999999874 1 134556678899999999997 8999999
Q ss_pred cccCC-CCCCchHhhHhCCccc
Q 009560 483 TLKND-RKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 483 ~~k~e-~~~Ws~~~~~~~g~~~ 503 (532)
+++.+ ...|+.+.....+.++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~ 382 (407)
T COG2730 361 PWSGGNDTGYDIEDDINLGLFP 382 (407)
T ss_pred cccCCCCCccchhhcchhhccc
Confidence 99998 7788888877766665
|
|
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-20 Score=162.19 Aligned_cols=110 Identities=28% Similarity=0.480 Sum_probs=102.4
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFE 146 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~ 146 (532)
-||+|||. +|||||++++| ..|.|||+++++||+|+|.+.++++++||+.||+||+++..|. +.|+++ ++++|.|+
T Consensus 2 p~v~Lrs~-~gkyl~~~~~g-~~v~a~~~~~~~~e~F~l~~~~~g~v~Lrs~~G~yls~~~~g~-l~~~~~-~~~~e~F~ 77 (119)
T cd00257 2 PQVVLRSV-NGRYLSAEAGG-DKVDANRDSLKGDETFTLEFDNTGKYALRSHDGKYLSADSDGG-VQLEGH-PNADCRFT 77 (119)
T ss_pred cEEEEEEc-CCCEEEEeccC-CEEEEcCccCCCceEEEEEECCCCeEEEEECCCcEEEEECCCC-EEecCC-CCCCcEEE
Confidence 48999998 99999999987 5899999999999999999888999999999999999998885 999999 99999999
Q ss_pred EEEcCCCcEEEEecCCceEEeccCceEEeCCCCC
Q 009560 147 IERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGM 180 (532)
Q Consensus 147 ~v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~ 180 (532)
++.+++++++||+.||+||+++..+.|.++....
T Consensus 78 ~e~~~~g~~al~~~~G~yl~~~~~g~l~~~~~~~ 111 (119)
T cd00257 78 LEFHGDGKWALRAENGRYLGGDGSGTLKASSETV 111 (119)
T ss_pred EEECCCCeEEEEcCCCCEEeecCCCeEEEecCCC
Confidence 9998778999999999999999999999998754
|
|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-16 Score=170.44 Aligned_cols=183 Identities=18% Similarity=0.190 Sum_probs=132.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.+|.|++| +++ ||+++...... + .+..+...+.|.+.++.+ ++||+.||++|+|++|++|
T Consensus 7 wG~atsa~Q~EG~~~~~gkg~s~wd~~~~~~---~--~~~~~~~~~~a~d~y~~y------~eDi~l~~~~G~~~~R~si 75 (427)
T TIGR03356 7 WGVATASYQIEGAVNEDGRGPSIWDTFSHTP---G--KVKDGDTGDVACDHYHRY------EEDVALMKELGVDAYRFSI 75 (427)
T ss_pred EeeechHHhhCCCcCCCCCccchhheeccCC---C--cccCCCCCCccccHHHhH------HHHHHHHHHcCCCeEEccc
Confidence 34457889999999 444 89999743210 0 111223446688888777 8999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|+..+.++++.+++++++|+.|+++||.+||+||+. +.+-.......|.+++..++++++++.+++
T Consensus 76 ~Wsri-~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hf-------d~P~~l~~~gGw~~~~~~~~f~~ya~~~~~ 147 (427)
T TIGR03356 76 AWPRI-FPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHW-------DLPQALEDRGGWLNRDTAEWFAEYAAVVAE 147 (427)
T ss_pred chhhc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccC-------CccHHHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 98654 4543246788899999999999999999999999984 333221122579999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCCC-------C-Cc--c----------cHHHHHHHHHHHHHhhCCCcEE
Q 009560 327 RYAKHPALLGIELLNEPSAAT-------V-PL--D----------ILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~~-------~-~~--~----------~l~~~~~~~~~aIR~~~~~~~V 373 (532)
||++.... |+++|||.... . .+ . .+.....++++++|+..|+..|
T Consensus 148 ~~~d~v~~--w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha~A~~~~~~~~~~~~I 212 (427)
T TIGR03356 148 RLGDRVKH--WITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHGLAVQALRANGPGAQV 212 (427)
T ss_pred HhCCcCCE--EEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 99996555 58999997421 0 10 1 1223334567778888876444
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-16 Score=164.07 Aligned_cols=187 Identities=16% Similarity=0.218 Sum_probs=143.1
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
+|.-+|.+|.+++| |++ +|++++..... +.+. +..+++++.|..+++.+ ++|++.+|++|+|+.|++|
T Consensus 10 WG~AtAa~Q~EGa~~~dGkg~s~wD~~~~~~-~~~~--~~~~~~~~~a~d~YhrY------keDi~L~~emG~~~~R~SI 80 (460)
T COG2723 10 WGGATAAFQVEGAWNEDGKGPSDWDVWVHDE-IPGR--LVSGDPPEEASDFYHRY------KEDIALAKEMGLNAFRTSI 80 (460)
T ss_pred eecccccccccCCcCCCCCCCeeeeeeeccc-cCCc--ccCCCCCccccchhhhh------HHHHHHHHHcCCCEEEeee
Confidence 45678899999999 555 99999887642 2222 23558889999999998 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGT-TDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~-~~W~~~~~~~~~~~~w~~la 325 (532)
.|...++...+...++.+++.++++|+.|+++||..+|+|||.. .+-..... .+|.+++.++.++++.+.++
T Consensus 81 ~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd-------~P~~L~~~ygGW~nR~~i~~F~~ya~~vf 153 (460)
T COG2723 81 EWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFD-------LPLWLQKPYGGWENRETVDAFARYAATVF 153 (460)
T ss_pred eEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccC-------CcHHHhhccCCccCHHHHHHHHHHHHHHH
Confidence 99766654444356888999999999999999999999999953 22212222 47999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCCCC--------C--CcccHHHHHHH----------HHHHHHhhCCC-cEEE
Q 009560 326 SRYAKHPALLGIELLNEPSAAT--------V--PLDILVPYYKQ----------GYQIVRKYSPT-AYVI 374 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~~~--------~--~~~~l~~~~~~----------~~~aIR~~~~~-~~Vi 374 (532)
+||++....+. ++|||.... . +.......+|. +++++|+..|+ .+=+
T Consensus 154 ~~f~dkVk~W~--TFNE~n~~~~~~y~~~~~~p~~~~~~~~~qa~hh~~lA~A~avk~~~~~~~~~kIG~ 221 (460)
T COG2723 154 ERFGDKVKYWF--TFNEPNVVVELGYLYGGHPPGIVDPKAAYQVAHHMLLAHALAVKAIKKINPKGKVGI 221 (460)
T ss_pred HHhcCcceEEE--EecchhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcCceEE
Confidence 99999776644 999998621 0 11224444443 56678888887 4433
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.9e-16 Score=160.28 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=157.0
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
.++-|+.||+.|+|+|||.| | .+|..++ -..++...++.+.|+++||+|+||+|-. .-|..+|...-+.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRv--w--v~P~~~g---~~~~~~~~~~akrak~~Gm~vlldfHYS----D~WaDPg~Q~~P~ 94 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRV--W--VNPYDGG---YNDLEDVIALAKRAKAAGMKVLLDFHYS----DFWADPGKQNKPA 94 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-----SS-TTTT---TTSHHHHHHHHHHHHHTT-EEEEEE-SS----SS--BTTB-B--T
T ss_pred CCCHHHHHHhcCCCeEEEEe--c--cCCcccc---cCCHHHHHHHHHHHHHCCCeEEEeeccc----CCCCCCCCCCCCc
Confidence 47899999999999999988 3 3443311 1268888888899999999999999952 1122333333455
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHhCCCCc-EEEEEeccCC-------CCCCCCcccHHHHHHHHHHHHHhhCCCcEEEE
Q 009560 307 DWPA---SDYISQTLDVIDFLASRYAKHPA-LLGIELLNEP-------SAATVPLDILVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 307 ~W~~---~~~~~~~~~~w~~la~ry~~~p~-v~g~EL~NEP-------~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
.|.+ ++..+...++-+.+.+.+++... .-.+++-||- .+.....+.+.+++++++++||+.+|+..|++
T Consensus 95 aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p~~kV~l 174 (332)
T PF07745_consen 95 AWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDPNIKVML 174 (332)
T ss_dssp TCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSSTSEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence 6875 33444444555555555554321 2237899994 43345677899999999999999999999999
Q ss_pred eCCCCCCCc---hhhhhcc--CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcc
Q 009560 376 CQRIGNADP---LELYQAN--IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNE 450 (532)
Q Consensus 376 ~~~~~~~~~---~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~ 450 (532)
+-.-+ .+. ..|++.. .+.+..|+.+++|+.|+. .+..+. ..+..++++.++||+|-|.|-.
T Consensus 175 H~~~~-~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~---------~l~~l~----~~l~~l~~ry~K~V~V~Et~yp 240 (332)
T PF07745_consen 175 HLANG-GDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG---------TLEDLK----NNLNDLASRYGKPVMVVETGYP 240 (332)
T ss_dssp EES-T-TSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST----------HHHHH----HHHHHHHHHHT-EEEEEEE---
T ss_pred EECCC-CchHHHHHHHHHHHhcCCCcceEEEecCCCCcc---------hHHHHH----HHHHHHHHHhCCeeEEEecccc
Confidence 84322 121 2333321 467889999999997653 122222 3344556666889999999976
Q ss_pred cC------------------CCCCCHHHHHHHHHHHHHHHHh----CCCcEEEE--cccC--------CCCCCchHhhHh
Q 009560 451 WN------------------VTSGTQKDYQDFGSAQLEVYNA----ASFGWAYW--TLKN--------DRKHWDFEWNIR 498 (532)
Q Consensus 451 ~~------------------~~~a~~~~~~~~~~~ql~~~~~----~~~Gw~yW--~~k~--------e~~~Ws~~~~~~ 498 (532)
++ ...++.+...+|+++++++..+ .+.|.+|| .|-+ .+..|+-..+.+
T Consensus 241 ~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~GvfYWeP~w~~~~~~~~~~~g~~w~n~~lFD 320 (332)
T PF07745_consen 241 WTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNVPNGGGLGVFYWEPAWIPVENGWDWGGGSSWDNQALFD 320 (332)
T ss_dssp SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEEEEE-TT-GGGTTHHHHTTTSSSSBGSSB-
T ss_pred ccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEEEeeccccccCCcccccCCCCCccccccCC
Confidence 65 1124677888999999887765 78999999 3332 256677665555
Q ss_pred CCcccCCCCCCccee
Q 009560 499 NNYLQLGNSPNMQIF 513 (532)
Q Consensus 499 ~g~~~~~~~p~~~~~ 513 (532)
....++|.+++|
T Consensus 321 ---~~g~~l~sl~~f 332 (332)
T PF07745_consen 321 ---FNGNALPSLDVF 332 (332)
T ss_dssp ---TTSBB-GGGGHH
T ss_pred ---CCCCCchHhhcC
Confidence 344666766654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.5e-16 Score=136.85 Aligned_cols=102 Identities=30% Similarity=0.523 Sum_probs=90.7
Q ss_pred CeEEEEecCCCceeEEcCCCCCCcceEEEEEecCC-eEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcE
Q 009560 77 EKYVCAESGGGTDVSVTRDVASSWETFTLWRVSES-EFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRV 155 (532)
Q Consensus 77 ~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~-~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v 155 (532)
++|+++|..| ..|.|||.+++.||+|+|...+++ .++||+.+|+||+++..|. |+|++++++++++|+|+.+ ++.+
T Consensus 2 ~~~~~~~k~~-~~l~an~~~~~~~e~f~le~~~~~~~v~lrs~~GkYls~~~~G~-v~~~~~~~~~~~~F~i~~~-~~~~ 78 (111)
T PF06268_consen 2 NGYLVSEKFG-AHLNANRASLSDWETFQLEFDDGSYKVALRSHNGKYLSVDSDGS-VVADSETPGPDEFFEIEWH-GGKV 78 (111)
T ss_dssp TEEEEETTCT-CBEEEEESSSSCGGSEEEEEETTEEEEEEECTTSEEEEEETTSE-EEEEESSSSGGGCBEEEEE-TTEE
T ss_pred CcEEEEEEcC-CEEECChhcCcccEEEEEEEECCCCEEEEEcCCCCEEEEcCCCe-EEecCCCCCCCcEEEEEEC-CCEE
Confidence 5688888875 569999999999999998866553 3789999999999999996 9999999999999999999 8889
Q ss_pred EEEecCCceEEeccCceEEeCCCCCC
Q 009560 156 HIKLKSGTYLQATLGNQLTSDYPGMP 181 (532)
Q Consensus 156 ~i~a~nG~~l~a~~~~~v~ad~~~~~ 181 (532)
.++++||+||++++++.|.|+....+
T Consensus 79 ~~~~~nGkYl~~~~~g~l~a~~~~~~ 104 (111)
T PF06268_consen 79 ALRASNGKYLSAGPNGQLKANATSPG 104 (111)
T ss_dssp EEECTTSCEEEEETTTEEEEEESSSS
T ss_pred EEECCCCCEEeeCCCCeEEEcCCCCC
Confidence 99999999999999999999876544
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-14 Score=142.17 Aligned_cols=269 Identities=17% Similarity=0.244 Sum_probs=169.3
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcC--hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGG--SLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG 304 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~--~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g 304 (532)
.++-|+.||++|+|.|||.| |..--.+.+.+|-.+ .++..-++-+.|++.||+|++|+|-. .-|..++....
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv--wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYS----DfwaDPakQ~k 138 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV--WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYS----DFWADPAKQKK 138 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE--ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccch----hhccChhhcCC
Confidence 36788999999999999988 432111233344333 45555666788999999999999953 22334444445
Q ss_pred CCCCCCh---hhHHHHHHHHHHHHHHhCCCCcE-EEEEeccCCCC-------CCCCcccHHHHHHHHHHHHHhhCCCcEE
Q 009560 305 TTDWPAS---DYISQTLDVIDFLASRYAKHPAL-LGIELLNEPSA-------ATVPLDILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 305 ~~~W~~~---~~~~~~~~~w~~la~ry~~~p~v-~g~EL~NEP~~-------~~~~~~~l~~~~~~~~~aIR~~~~~~~V 373 (532)
+..|.+. ..+....++-+...+.+++.... -..++-||-.. .+...+.+.+++.+++.+||+++|+..|
T Consensus 139 PkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~p~ikv 218 (403)
T COG3867 139 PKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVSPTIKV 218 (403)
T ss_pred cHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcCCCceE
Confidence 5667643 23334445666666677665322 24789999654 2336788999999999999999999999
Q ss_pred EEeCCCCC--CCchhhhhcc--CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCc
Q 009560 374 IVCQRIGN--ADPLELYQAN--IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVN 449 (532)
Q Consensus 374 iv~~~~~~--~~~~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~ 449 (532)
+++-.-+. .-...+++-. ..-+..|+...||+.|+.. +..+ ...+.+++++.++.|+|-|-+-
T Consensus 219 ~lHla~g~~n~~y~~~fd~ltk~nvdfDVig~SyYpyWhgt---------l~nL----~~nl~dia~rY~K~VmV~Etay 285 (403)
T COG3867 219 ALHLAEGENNSLYRWIFDELTKRNVDFDVIGSSYYPYWHGT---------LNNL----TTNLNDIASRYHKDVMVVETAY 285 (403)
T ss_pred EEEecCCCCCchhhHHHHHHHHcCCCceEEeeeccccccCc---------HHHH----HhHHHHHHHHhcCeEEEEEecc
Confidence 88743221 1112233221 3567789999999887642 2222 2234456667778899999987
Q ss_pred ccCCCC------------------CCHHHHHHHHHHHHHHH----HhCCCcEEEEc-----------ccC--------C-
Q 009560 450 EWNVTS------------------GTQKDYQDFGSAQLEVY----NAASFGWAYWT-----------LKN--------D- 487 (532)
Q Consensus 450 ~~~~~~------------------a~~~~~~~~~~~ql~~~----~~~~~Gw~yW~-----------~k~--------e- 487 (532)
.|+... .+.+....|+++++++- .+.+.|-|||. |.. |
T Consensus 286 ~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~~~GlGvFYWEp~wipv~~g~gwat~~~~~y~~e~ 365 (403)
T COG3867 286 TYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPKSNGLGVFYWEPAWIPVVLGSGWATSYAAKYDPEN 365 (403)
T ss_pred eeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCCCCceEEEEecccceeccCCCccccchhhccCccc
Confidence 653110 01122345666555444 34689999993 221 1
Q ss_pred ---CCCCchHhhHhCCcccCCCCCCcceeechh
Q 009560 488 ---RKHWDFEWNIRNNYLQLGNSPNMQIFNSLV 517 (532)
Q Consensus 488 ---~~~Ws~~~~~~~g~~~~~~~p~~~~~~~~~ 517 (532)
+..|+-+.+.+ +...|.|++++||.+.
T Consensus 366 w~~gsavdNqaLfd---f~G~~LPSl~vFn~ve 395 (403)
T COG3867 366 WGEGSAVDNQALFD---FNGHPLPSLNVFNYVE 395 (403)
T ss_pred ccCCCccchhhhhh---ccCCcCcchhhhhhhc
Confidence 23344444444 4678999999999875
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-14 Score=151.85 Aligned_cols=161 Identities=12% Similarity=0.127 Sum_probs=120.9
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccC-CCCc------ccee-ecc-cChhhHHHHHHhhccccCCHHHHHHHHHc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVAN-NLHG------DYQL-ANG-YGHERAKEVLKRHRNTFITIEDFNFLYRH 237 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~-~~~~------e~~l-~~~-~G~~~a~~~~~~hw~t~ite~d~~~la~~ 237 (532)
.|.-||.||.|++| +++ ||+++...... .+.. ...+ ... +..+.|.+.++++ ++|++.|+++
T Consensus 10 wG~AtsA~QiEGa~~~~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry------~eDi~l~~~l 83 (474)
T PRK09852 10 WGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEAIDFYHRY------KEDIALMAEM 83 (474)
T ss_pred EeccchHhhcCCCcCCCCCCCchhhccccCCCcccccccccccccccccCcCCCCccCchhhhh------HHHHHHHHHc
Confidence 34457889999999 555 99999743310 0100 0011 111 2446688888887 9999999999
Q ss_pred CCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHH
Q 009560 238 GINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQ 316 (532)
Q Consensus 238 G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~ 316 (532)
|+|+.|+++.|..+++...+...++..+++++++|+.|+++||.+||+|||. +.+.... ....|.+++..+.
T Consensus 84 G~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~-------~~P~~l~~~~GGW~~~~~~~~ 156 (474)
T PRK09852 84 GFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHF-------DVPMHLVTEYGSWRNRKMVEF 156 (474)
T ss_pred CCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-------CCCHHHHHhcCCCCCHHHHHH
Confidence 9999999999976655432334588899999999999999999999999984 3333221 2357999999999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 317 TLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 317 ~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
++++++.+++||++....+. .+|||..
T Consensus 157 F~~ya~~~~~~fgd~Vk~Wi--TfNEPn~ 183 (474)
T PRK09852 157 FSRYARTCFEAFDGLVKYWL--TFNEINI 183 (474)
T ss_pred HHHHHHHHHHHhcCcCCeEE--eecchhh
Confidence 99999999999999877754 9999973
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=149.02 Aligned_cols=150 Identities=15% Similarity=0.231 Sum_probs=118.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.++.| +++ ||+++..... . .....+.|.+.++++ ++||+.||++|+|+.|+++
T Consensus 10 wG~AtsA~QvEG~~~~~Gkg~siwD~~~~~---~------~~~~~~~a~d~yhry------~eDi~L~~~lG~~~yRfSI 74 (467)
T TIGR01233 10 FGGATAAYQAEGATHTDGKGPVAWDKYLED---N------YWYTAEPASDFYHKY------PVDLELAEEYGVNGIRISI 74 (467)
T ss_pred EeeechhhhcCCCcCCCCCcCchhhccccC---C------CCCCCCccCchhhhH------HHHHHHHHHcCCCEEEEec
Confidence 45567889999999 555 9999973321 0 112346788888887 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..++ |+..++++++.+++++++|+.|+++||.+||+|||. +.+-.......|.+++..+.|+++.+.+++
T Consensus 75 sWsRI~-P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~GGW~n~~~v~~F~~YA~~~f~ 146 (467)
T TIGR01233 75 AWSRIF-PTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDFLNRENIEHFIDYAAFCFE 146 (467)
T ss_pred chhhcc-CCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCC-------CCcHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 996554 433346788999999999999999999999999994 443322234679999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC
Q 009560 327 RYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~ 345 (532)
+|++ ... |=.+|||..
T Consensus 147 ~fgd-Vk~--WiT~NEP~~ 162 (467)
T TIGR01233 147 EFPE-VNY--WTTFNEIGP 162 (467)
T ss_pred HhCC-CCE--EEEecchhh
Confidence 9996 444 569999975
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-13 Score=148.09 Aligned_cols=150 Identities=16% Similarity=0.257 Sum_probs=118.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+++..... + .....+.|.+.++++ ++|++.||++|+|+.|+++
T Consensus 11 wG~Atsa~QiEG~~~~~Gkg~siwD~~~~~-~--------~~~~~~~a~d~Y~ry------~eDi~L~~~lG~~~yRfSI 75 (469)
T PRK13511 11 FGGATAAYQAEGATKTDGKGPVAWDKYLEE-N--------YWFTPDPASDFYHRY------PEDLKLAEEFGVNGIRISI 75 (469)
T ss_pred EEeechHhhhcCCcCCCCCccchhhccccc-C--------CCCCCCcccchhhhh------HHHHHHHHHhCCCEEEeec
Confidence 34567889999999 555 9999974321 1 112346688888777 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+++ +..+..++..+++++++|+.|+++||.++|+|||. +.+-.......|.+++..+.|+++.+.+++
T Consensus 76 sWsRI~P-~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~GGW~n~~~v~~F~~YA~~~~~ 147 (469)
T PRK13511 76 AWSRIFP-DGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDWLNRENIDHFVRYAEFCFE 147 (469)
T ss_pred cHhhcCc-CCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCC-------CCcHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 9965544 33246788999999999999999999999999984 443322234679999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC
Q 009560 327 RYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~ 345 (532)
||++ ... |=.+|||..
T Consensus 148 ~fgd-Vk~--W~T~NEP~~ 163 (469)
T PRK13511 148 EFPE-VKY--WTTFNEIGP 163 (469)
T ss_pred HhCC-CCE--EEEccchhh
Confidence 9999 666 449999974
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=149.70 Aligned_cols=151 Identities=15% Similarity=0.207 Sum_probs=121.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ ||++++.... + .....+.|.+.++++ ++|++.||++|+|+.|+++
T Consensus 36 wG~AtsA~QiEGa~~~~Gkg~SiwD~~~~~-~--------~~~~~~~a~D~YhrY------~eDI~Lm~~lG~~aYRfSI 100 (503)
T PLN02849 36 FGAGTSAYQWEGAFDEDGRKPSVWDTFLHS-R--------NMSNGDIACDGYHKY------KEDVKLMVETGLDAFRFSI 100 (503)
T ss_pred EEeechhhhhcCCcCCCCCcCcceeeeecc-C--------CCCCCCccccHHHhH------HHHHHHHHHcCCCeEEEec
Confidence 45567889999999 554 9999984422 1 123446688888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~la 325 (532)
.|..++ |+..++.+++++++++++|+.+.++||.++|+||| |+.+-.... ...|.+++..+.++++.+.++
T Consensus 101 sWsRI~-P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H-------~dlP~~L~~~yGGW~nr~~v~~F~~YA~~~f 172 (503)
T PLN02849 101 SWSRLI-PNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFH-------YDHPQYLEDDYGGWINRRIIKDFTAYADVCF 172 (503)
T ss_pred cHHhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecC-------CCCcHHHHHhcCCcCCchHHHHHHHHHHHHH
Confidence 986554 44334678899999999999999999999999998 444432222 368999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
++|++....+. .+|||..
T Consensus 173 ~~fgDrVk~Wi--T~NEP~~ 190 (503)
T PLN02849 173 REFGNHVKFWT--TINEANI 190 (503)
T ss_pred HHhcCcCCEEE--Eecchhh
Confidence 99999877754 9999984
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=149.58 Aligned_cols=160 Identities=15% Similarity=0.203 Sum_probs=118.6
Q ss_pred CceEEeCCCCCCCC--CCC-Ccceeeeccc-CCCCccc---eeecc-cChhhHHHHHHhhccccCCHHHHHHHHHcCCCE
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVA-NNLHGDY---QLANG-YGHERAKEVLKRHRNTFITIEDFNFLYRHGINT 241 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~-~~~~~e~---~l~~~-~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~ 241 (532)
.|.-||.||.|++| +++ ||++++.... ....+.. ..... +..+.|.+.++++ ++|++.||++|+|+
T Consensus 12 wG~AtsA~QiEGa~~e~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~A~D~Yhry------~EDI~Lm~elG~~~ 85 (477)
T PRK15014 12 WGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVVPGKYYPNHEAVDFYGHY------KEDIKLFAEMGFKC 85 (477)
T ss_pred EeeecHHHHhCCCcCCCCCcccHhhccccccccCccccccccccCCcCCCCcccCccccc------HHHHHHHHHcCCCE
Confidence 44567889999999 555 9999974310 0000000 00111 2345677777776 99999999999999
Q ss_pred EEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHH
Q 009560 242 VRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDV 320 (532)
Q Consensus 242 VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~ 320 (532)
.|+++.|..+++...+...++..+++++++|+.++++||.+||+|||. +.+.... ....|.+++..+.|+++
T Consensus 86 yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~n~~~~~~F~~Y 158 (477)
T PRK15014 86 FRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHF-------EMPLHLVQQYGSWTNRKVVDFFVRF 158 (477)
T ss_pred EEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-------CCCHHHHHhcCCCCChHHHHHHHHH
Confidence 999999976654322334588899999999999999999999999984 3332221 23679999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCC
Q 009560 321 IDFLASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 321 w~~la~ry~~~p~v~g~EL~NEP~ 344 (532)
.+.+++||++....+. .+|||.
T Consensus 159 a~~~f~~fgdrVk~Wi--T~NEp~ 180 (477)
T PRK15014 159 AEVVFERYKHKVKYWM--TFNEIN 180 (477)
T ss_pred HHHHHHHhcCcCCEEE--EecCcc
Confidence 9999999999877654 999996
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=138.52 Aligned_cols=272 Identities=21% Similarity=0.282 Sum_probs=141.7
Q ss_pred hhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc--CCCCCC---C-
Q 009560 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL--HAAPGS---Q- 293 (532)
Q Consensus 220 ~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl--H~~pGs---q- 293 (532)
+||..-.-++|++.|+++|+|+|||....|...+|.++ .| .++.||++|+.|+++||+|||.+ +..|.. .
T Consensus 5 e~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG-~y---dF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 5 EQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEG-QY---DFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp GGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTT-B------HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCC-ee---ecHHHHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 46776667999999999999999996545567788764 55 58889999999999999999976 333421 0
Q ss_pred -C--CCCCCCCCC--C---CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-C-----------------
Q 009560 294 -N--GMEHSASRD--G---TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-T----------------- 347 (532)
Q Consensus 294 -n--~~~~sg~~~--g---~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-~----------------- 347 (532)
. ..+..|... + .....++..++...++++.|++||+++|+|++|++-|||... .
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY 160 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKY 160 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHh
Confidence 0 001111110 1 111225678999999999999999999999999999998651 0
Q ss_pred ------------------------C---------------------CcccHHHHHHHHHHHHHhhCCCcEEEEe--CC-C
Q 009560 348 ------------------------V---------------------PLDILVPYYKQGYQIVRKYSPTAYVIVC--QR-I 379 (532)
Q Consensus 348 ------------------------~---------------------~~~~l~~~~~~~~~aIR~~~~~~~Viv~--~~-~ 379 (532)
+ ..+.+.++++...++||+++|+++|... +. .
T Consensus 161 ~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~~p~~~vt~n~~~~~~ 240 (374)
T PF02449_consen 161 GTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIREYDPDHPVTTNFMGSWF 240 (374)
T ss_dssp SSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-EEE-EE-TT--
T ss_pred CCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCcccccc
Confidence 0 0134677888899999999999887643 11 1
Q ss_pred CCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcc---cCCCCC
Q 009560 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNE---WNVTSG 456 (532)
Q Consensus 380 ~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~---~~~~~a 456 (532)
...|...+. ..-.+++.+.|+...... ............+. +..+ +.+.|.+|.|.-.. |...+.
T Consensus 241 ~~~d~~~~a-----~~~D~~~~d~Y~~~~~~~-~~~~~~~~a~~~dl----~R~~--~~~kpf~v~E~~~g~~~~~~~~~ 308 (374)
T PF02449_consen 241 NGIDYFKWA-----KYLDVVSWDSYPDGSFDF-YDDDPYSLAFNHDL----MRSL--AKGKPFWVMEQQPGPVNWRPYNR 308 (374)
T ss_dssp -SS-HHHHG-----GGSSSEEEEE-HHHHHTT-TT--TTHHHHHHHH----HHHH--TTT--EEEEEE--S--SSSSS--
T ss_pred CcCCHHHHH-----hhCCcceeccccCcccCC-CCCCHHHHHHHHHH----HHhh--cCCCceEeecCCCCCCCCccCCC
Confidence 112222221 223567888887610000 00111111122111 1112 35788999999543 211111
Q ss_pred C--HHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchHhhHhCCcccCCCCCCccee
Q 009560 457 T--QKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIF 513 (532)
Q Consensus 457 ~--~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~~~p~~~~~ 513 (532)
. +...+.+. ...+....-|-.||.|+.... ..| ..-.|++..+.++..+.|
T Consensus 309 ~~~pg~~~~~~---~~~~A~Ga~~i~~~~wr~~~~--g~E-~~~~g~~~~dg~~~~~~~ 361 (374)
T PF02449_consen 309 PPRPGELRLWS---WQAIAHGADGILFWQWRQSRF--GAE-QFHGGLVDHDGREPTRRY 361 (374)
T ss_dssp ---TTHHHHHH---HHHHHTT-S-EEEC-SB--SS--STT-TTS--SB-TTS--B-HHH
T ss_pred CCCCCHHHHHH---HHHHHHhCCeeEeeeccCCCC--Cch-hhhcccCCccCCCCCcHH
Confidence 1 11222222 123333556899999987411 111 233466666552334433
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.46 E-value=2e-13 Score=148.40 Aligned_cols=151 Identities=16% Similarity=0.191 Sum_probs=121.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||++++.... ..+...+.|.+.++++ ++|++.||++|+|+.|+++
T Consensus 34 wG~AtaA~QiEGa~~~~gkg~siwD~~~~~---------~~~~~~~~a~D~Yhry------~EDI~L~k~lG~~ayRfSI 98 (504)
T PLN02814 34 FGAATSAYQWEGAVDEDGRTPSVWDTTSHC---------YNGGNGDIASDGYHKY------KEDVKLMAEMGLESFRFSI 98 (504)
T ss_pred EeeechhhhhcCCcCCCCCccchhheeeec---------cCCCCCCccccHHHhh------HHHHHHHHHcCCCEEEEec
Confidence 45567889999999 454 9999974321 1223446688888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~la 325 (532)
.|..++ |+..+..+++++++++++|+.|.++||.++|+||| |+.+-.... ...|.+++..+.++++.+.++
T Consensus 99 sWsRI~-P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H-------~dlP~~L~~~yGGW~n~~~i~~F~~YA~~~f 170 (504)
T PLN02814 99 SWSRLI-PNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYH-------YDLPQSLEDEYGGWINRKIIEDFTAFADVCF 170 (504)
T ss_pred cHhhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecC-------CCCCHHHHHhcCCcCChhHHHHHHHHHHHHH
Confidence 996554 43334568899999999999999999999999999 444432222 368999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
++|++....+. .+|||..
T Consensus 171 ~~fgdrVk~Wi--T~NEP~~ 188 (504)
T PLN02814 171 REFGEDVKLWT--TINEATI 188 (504)
T ss_pred HHhCCcCCEEE--eccccch
Confidence 99999877654 9999984
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.4e-13 Score=146.37 Aligned_cols=153 Identities=14% Similarity=0.185 Sum_probs=121.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+|+..... +. ......+.|.+.++++ ++|++.||++|+|+.|++|
T Consensus 37 wG~AtSA~QvEGa~~~~Gkg~siwD~~~~~-~~------~~~~~~~~a~D~Yhry------~EDi~lmk~lG~~~YRfSI 103 (497)
T PLN02998 37 FGSGTSAYQVEGAADEDGRTPSIWDVFAHA-GH------SGVAAGNVACDQYHKY------KEDVKLMADMGLEAYRFSI 103 (497)
T ss_pred EeeechHHHhCCCcCCCCCccchhhccccc-Cc------CCCCCCcccccHHHhh------HHHHHHHHHcCCCeEEeec
Confidence 45567889999999 555 9999974321 11 1112345688888887 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~la 325 (532)
.|..++ |+..++++++++++++++|+.+.++||.+||+||| |+.+..... ...|.+++..+.|.++.+.++
T Consensus 104 sWsRI~-P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H-------~dlP~~L~~~yGGW~n~~~v~~F~~YA~~~~ 175 (497)
T PLN02998 104 SWSRLL-PSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHH-------FDLPQALEDEYGGWLSQEIVRDFTAYADTCF 175 (497)
T ss_pred cHHhcC-cCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecC-------CCCCHHHHHhhCCcCCchHHHHHHHHHHHHH
Confidence 996554 43334578899999999999999999999999999 444432222 368999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
+||++....+. .+|||..
T Consensus 176 ~~fgdrVk~Wi--T~NEP~~ 193 (497)
T PLN02998 176 KEFGDRVSHWT--TINEVNV 193 (497)
T ss_pred HHhcCcCCEEE--EccCcch
Confidence 99999877754 9999985
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-13 Score=146.80 Aligned_cols=161 Identities=14% Similarity=0.205 Sum_probs=121.0
Q ss_pred CceEEeCCCCCCCC--CCC-Ccceeeeccc-CCCCccc--eeecc--cChhhHHHHHHhhccccCCHHHHHHHHHcCCCE
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVA-NNLHGDY--QLANG--YGHERAKEVLKRHRNTFITIEDFNFLYRHGINT 241 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~-~~~~~e~--~l~~~--~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~ 241 (532)
.|.-||.||.|+.| +++ ||+++..... ....+.. ....+ +..+.|.+.++++ ++|++.||++|+|+
T Consensus 10 wG~AtsA~QiEGa~~~~gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~D~Yhry------~eDi~Lm~~lG~~~ 83 (476)
T PRK09589 10 WGGAVAAHQLEGGWNEGGKGISVADVMTAGAHGVPREITEGVIEGKNYPNHEAIDFYHRY------KEDIALFAEMGFKC 83 (476)
T ss_pred EeeechHhhhcCCcCCCCCCCchhcccccccccCccccccCccCCCcCCCcccccHHHhh------HHHHHHHHHcCCCE
Confidence 34567889999999 555 9999974411 0000100 01011 2446788888888 99999999999999
Q ss_pred EEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHH
Q 009560 242 VRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDV 320 (532)
Q Consensus 242 VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~ 320 (532)
.|++|.|..+++...++..+++.+++++++|+.|.++||.++|+||| |+.+-... ....|.+++..+.|+++
T Consensus 84 yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H-------~dlP~~L~~~yGGW~n~~~i~~F~~Y 156 (476)
T PRK09589 84 FRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSH-------FEMPYHLVTEYGGWRNRKLIDFFVRF 156 (476)
T ss_pred EEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecC-------CCCCHHHHHhcCCcCChHHHHHHHHH
Confidence 99999996654432233458889999999999999999999999999 44432221 23679999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 321 IDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 321 w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.+.++++|++....+. .+|||..
T Consensus 157 A~~~f~~fgdrVk~Wi--T~NEp~~ 179 (476)
T PRK09589 157 AEVVFTRYKDKVKYWM--TFNEINN 179 (476)
T ss_pred HHHHHHHhcCCCCEEE--Eecchhh
Confidence 9999999999877654 9999973
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.8e-13 Score=145.69 Aligned_cols=161 Identities=14% Similarity=0.220 Sum_probs=121.1
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccC-CC---Cccc---eeecc--cChhhHHHHHHhhccccCCHHHHHHHHHc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVAN-NL---HGDY---QLANG--YGHERAKEVLKRHRNTFITIEDFNFLYRH 237 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~-~~---~~e~---~l~~~--~G~~~a~~~~~~hw~t~ite~d~~~la~~ 237 (532)
.|.-||.||.++.| +++ ||+|+...... .+ .++- ...++ +..+.|.+.++++ ++|++.||++
T Consensus 12 wG~AtsA~QiEGa~~~~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~Yhry------~eDi~Lm~~l 85 (478)
T PRK09593 12 WGGATAANQCEGAYNVDGRGLANVDVVPIGEDRFPIITGEKKMFDFEEGYFYPAKEAIDMYHHY------KEDIALFAEM 85 (478)
T ss_pred EeeechHHHhCCCcCCCCCccchhhccccCcCcccccccccccccccccccCCCCcccchHHhh------HHHHHHHHHc
Confidence 34567889999999 555 99999733210 01 0000 00001 1346688888888 9999999999
Q ss_pred CCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHH
Q 009560 238 GINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQ 316 (532)
Q Consensus 238 G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~ 316 (532)
|+|+.|++|.|..+++...+...+++++++++++|+.+.++||.++|+||| |+.+.... ....|.+++..+.
T Consensus 86 G~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H-------~dlP~~L~~~~GGW~n~~~v~~ 158 (478)
T PRK09593 86 GFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITH-------FDCPMHLIEEYGGWRNRKMVGF 158 (478)
T ss_pred CCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecc-------cCCCHHHHhhcCCCCChHHHHH
Confidence 999999999996554432233468889999999999999999999999998 44443222 2368999999999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 317 TLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 317 ~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
|.++.+.+++||++....+. .+|||..
T Consensus 159 F~~YA~~~~~~fgdrVk~Wi--T~NEP~~ 185 (478)
T PRK09593 159 YERLCRTLFTRYKGLVKYWL--TFNEINM 185 (478)
T ss_pred HHHHHHHHHHHhcCcCCEEE--eecchhh
Confidence 99999999999999877755 9999974
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.39 E-value=2e-13 Score=147.65 Aligned_cols=184 Identities=16% Similarity=0.214 Sum_probs=128.6
Q ss_pred ceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccc
Q 009560 171 NQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVG 247 (532)
Q Consensus 171 ~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ 247 (532)
|--||.||.|+.| +++ ||+|+..... +. +...+...+.|.+.++.+ ++||+.||++|+|+.|+++.
T Consensus 12 G~atsa~Q~EG~~~~dGkg~s~wd~~~~~-~~----~~~~~~~~~~a~d~y~~y------~eDi~l~~~lg~~~yRfsi~ 80 (455)
T PF00232_consen 12 GVATSAYQIEGAWNEDGKGPSIWDTFCHE-PG----KVEDGSTGDVACDHYHRY------KEDIALMKELGVNAYRFSIS 80 (455)
T ss_dssp EEE--HHHHSSSTTSTTSTTBHHHHHHHS-TT----SSTTSSSSSSTTGHHHHH------HHHHHHHHHHT-SEEEEE--
T ss_pred EEeceeccccceecCCCCCcccccccccc-cc----eeeccccCcccccchhhh------hHHHHHHHhhccceeeeecc
Confidence 4456789999999 455 8999965433 11 112233356678888777 99999999999999999999
Q ss_pred cccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 248 WWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 248 ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
|-. +.|++ .+..++..++.++++|+.++++||++||+|||. +.+........|.+++..+.++++.+.+++
T Consensus 81 W~R-i~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~-------~~P~~l~~~ggw~~~~~~~~F~~Ya~~~~~ 152 (455)
T PF00232_consen 81 WSR-IFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHF-------DLPLWLEDYGGWLNRETVDWFARYAEFVFE 152 (455)
T ss_dssp HHH-HSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS---------BHHHHHHTGGGSTHHHHHHHHHHHHHHH
T ss_pred hhh-eeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeec-------ccccceeecccccCHHHHHHHHHHHHHHHH
Confidence 854 45554 457788999999999999999999999999983 333211123579999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC--------CC--Cccc----------HHHHHHHHHHHHHhhCCCcEEEE
Q 009560 327 RYAKHPALLGIELLNEPSAA--------TV--PLDI----------LVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~--------~~--~~~~----------l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
+|++....+. .+|||... .. .... +.....++++++|+..++..|-+
T Consensus 153 ~~gd~V~~w~--T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi 219 (455)
T PF00232_consen 153 RFGDRVKYWI--TFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGI 219 (455)
T ss_dssp HHTTTBSEEE--EEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEE
T ss_pred HhCCCcceEE--eccccceeeccccccccccccccccchhhHHHhhHHHHHHHHHHHHhhcccceEEec
Confidence 9999877754 99999751 00 1112 33334557788899888766533
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-10 Score=129.57 Aligned_cols=227 Identities=20% Similarity=0.180 Sum_probs=140.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC--CCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA--APGSQNGMEHSASRDGT 305 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~--~pGsqn~~~~sg~~~g~ 305 (532)
+.||+.||++|+|+||+.- . |. . .++++.|-++||.|+-++-. ..... +....+.....
T Consensus 316 ~~d~~l~K~~G~N~vR~sh-----~---p~---~-------~~~~~~cD~~GllV~~E~p~~~~~~~~-~~~~~~~~~~~ 376 (604)
T PRK10150 316 VHDHNLMKWIGANSFRTSH-----Y---PY---S-------EEMLDLADRHGIVVIDETPAVGLNLSF-GAGLEAGNKPK 376 (604)
T ss_pred HHHHHHHHHCCCCEEEecc-----C---CC---C-------HHHHHHHHhcCcEEEEecccccccccc-ccccccccccc
Confidence 5789999999999999931 1 11 1 16789999999999987621 10000 00000000011
Q ss_pred CCCC----ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC
Q 009560 306 TDWP----ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN 381 (532)
Q Consensus 306 ~~W~----~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~ 381 (532)
..|. +++..+...+.++.+.+|++++|+|++|.+.|||.. ..+....+++++++.+|+.||+++|.......
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~- 452 (604)
T PRK10150 377 ETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPAS---REQGAREYFAPLAELTRKLDPTRPVTCVNVMF- 452 (604)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCc---cchhHHHHHHHHHHHHHhhCCCCceEEEeccc-
Confidence 1222 346778888999999999999999999999999864 23466789999999999999999998764211
Q ss_pred CCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC-------CC
Q 009560 382 ADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN-------VT 454 (532)
Q Consensus 382 ~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~-------~~ 454 (532)
..+. .......-.|+++|.|..+..... ... .........+..+.+..++|++++|||+... ..
T Consensus 453 ~~~~---~~~~~~~~Dv~~~N~Y~~wy~~~~--~~~----~~~~~~~~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~~ 523 (604)
T PRK10150 453 ATPD---TDTVSDLVDVLCLNRYYGWYVDSG--DLE----TAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDD 523 (604)
T ss_pred CCcc---cccccCcccEEEEcccceecCCCC--CHH----HHHHHHHHHHHHHHHhcCCCEEEEccCCccccccccCCCC
Confidence 1110 000123357889888765321110 111 1111222223333333378999999996321 11
Q ss_pred CCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccC
Q 009560 455 SGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKN 486 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~ 486 (532)
..+.+....+++....++++ .-+|-+.|++..
T Consensus 524 ~~~ee~q~~~~~~~~~~~~~~p~~~G~~iW~~~D 557 (604)
T PRK10150 524 MWSEEYQCAFLDMYHRVFDRVPAVVGEQVWNFAD 557 (604)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCceEEEEEEeeec
Confidence 22334445667777777764 567999999775
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-11 Score=127.33 Aligned_cols=276 Identities=14% Similarity=0.134 Sum_probs=181.4
Q ss_pred cChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCC-----CCCCCcChHHHHHHHHHHHHHcCCEEE
Q 009560 209 YGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDP-----PAPFIGGSLEALDNALSWAEAYNIKCI 283 (532)
Q Consensus 209 ~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~-----~~~~~~~~l~~Ld~~v~~a~k~Gi~VI 283 (532)
+-+-.|..-|-.||...--++|++.++..|++.+|+-+ .|.++ +....+..+.+++..++.|...+|+|+
T Consensus 10 ~wprIanikmw~~~~~~ei~~dle~a~~vg~k~lR~fi-----LDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvl 84 (587)
T COG3934 10 RWPRIANIKMWPAIGNREIKADLEPAGFVGVKDLRLFI-----LDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVL 84 (587)
T ss_pred cchhhhhhhHHHHhhhhhhhcccccccCccceeEEEEE-----ecCcchhhhhceecccccHHHHHHHhhhcccCcceEE
Confidence 34445556666777765667899999999999999942 33222 222223349999999999999999999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCCCC----------ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC-CCCCccc
Q 009560 284 IDLHAAPGSQNGMEHSASRDGTTDWP----------ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA-ATVPLDI 352 (532)
Q Consensus 284 LDlH~~pGsqn~~~~sg~~~g~~~W~----------~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~-~~~~~~~ 352 (532)
|.+-. +++|-|.+.-...|. ++..+..+.++.+.+.+.||.+|.+.+|++-|||.. ...+...
T Consensus 85 itliv------g~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~ 158 (587)
T COG3934 85 ITLIV------GLKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNN 158 (587)
T ss_pred EEEee------cccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhH
Confidence 99863 344444332223333 356677789999999999999999999999999887 3456778
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHH
Q 009560 353 LVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQ 432 (532)
Q Consensus 353 l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~ 432 (532)
+..|...++..|+..||+|+|-+++... . ...+.+......-..-+.|.|.-|+.+. -.++...+. +.+.
T Consensus 159 f~~w~~emy~yiK~ldd~hlvsvGD~~s-p-~~~~~pyN~r~~vDya~~hLY~hyd~sl---~~r~s~~yg-----~~~l 228 (587)
T COG3934 159 FWDWSGEMYAYIKWLDDGHLVSVGDPAS-P-WPQYAPYNARFYVDYAANHLYRHYDTSL---VSRVSTVYG-----KPYL 228 (587)
T ss_pred HHHHHHHHHHHhhccCCCCeeecCCcCC-c-ccccCCcccceeeccccchhhhhccCCh---hheeeeeec-----chhh
Confidence 9999999999999999999999886431 1 1111111111112235678886444321 011111111 1111
Q ss_pred HHHhcCC-CcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC-----CCCCchH-hhHhCCcccCC
Q 009560 433 ALNNANG-PLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND-----RKHWDFE-WNIRNNYLQLG 505 (532)
Q Consensus 433 ~~~~~~g-~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e-----~~~Ws~~-~~~~~g~~~~~ 505 (532)
+..+.-| .||++-|||............|..|... ++.-.+-|-.+|++.+- .+.-.+. ..++.|+|.-+
T Consensus 229 ~i~~~~g~~pV~leefGfsta~g~e~s~ayfiw~~l---al~~ggdGaLiwclsdf~~gsdd~ey~w~p~el~fgiIrad 305 (587)
T COG3934 229 DIPTIMGWQPVNLEEFGFSTAFGQENSPAYFIWIRL---ALDTGGDGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRAD 305 (587)
T ss_pred ccchhcccceeeccccCCcccccccccchhhhhhhh---HHhhcCCceEEEEecCCccCCCCCCCccccccceeeeecCC
Confidence 2223335 8999999998866544445567777665 55557889999999873 2333333 46788888755
Q ss_pred CCC
Q 009560 506 NSP 508 (532)
Q Consensus 506 ~~p 508 (532)
.+|
T Consensus 306 gpe 308 (587)
T COG3934 306 GPE 308 (587)
T ss_pred Cch
Confidence 544
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.2e-11 Score=129.60 Aligned_cols=155 Identities=15% Similarity=0.227 Sum_probs=124.2
Q ss_pred eEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcccc
Q 009560 172 QLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248 (532)
Q Consensus 172 ~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~w 248 (532)
.-||.||.|+.+ ++. ||+|+...... .+ ..+..-..+.|.+.++.+ ++|++.|+++|+++.|++|+|
T Consensus 45 tAtSAyQ~EGA~~e~gRg~svWD~f~~~~---p~-~~~~~~ngdva~D~Yh~y------keDv~Lmk~lgv~afRFSIsW 114 (524)
T KOG0626|consen 45 TATSAYQVEGAANEDGRGPSVWDTFTHKY---PG-KICDGSNGDVAVDFYHRY------KEDVKLMKELGVDAFRFSISW 114 (524)
T ss_pred ccchHHHhhhhhccCCCCCchhhhhhccC---Cc-ccccCCCCCeechhhhhh------HHHHHHHHHcCCCeEEEEeeh
Confidence 346679999999 444 99999655332 12 344455568899999988 999999999999999999999
Q ss_pred ccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC-CCCCCCCChhhHHHHHHHHHHHHH
Q 009560 249 WIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR-DGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 249 w~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~-~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
..+++... ....++++++++..+|+...++||.++|+|.| |+.+-.. +....|.+++..+.+.++.+.+.+
T Consensus 115 SRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfH-------wDlPq~LeDeYgGwLn~~ivedF~~yA~~CF~ 187 (524)
T KOG0626|consen 115 SRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFH-------WDLPQALEDEYGGWLNPEIVEDFRDYADLCFQ 187 (524)
T ss_pred HhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEec-------CCCCHHHHHHhccccCHHHHHHHHHHHHHHHH
Confidence 76655443 34567889999999999999999999999998 5554322 336789999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC
Q 009560 327 RYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~ 345 (532)
+|+|.... |-.+|||..
T Consensus 188 ~fGDrVK~--WiT~NEP~v 204 (524)
T KOG0626|consen 188 EFGDRVKH--WITFNEPNV 204 (524)
T ss_pred Hhccccee--eEEecccce
Confidence 99998766 459999983
|
|
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=102.77 Aligned_cols=86 Identities=24% Similarity=0.410 Sum_probs=73.2
Q ss_pred cccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceE
Q 009560 53 SLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVV 132 (532)
Q Consensus 53 ~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~ 132 (532)
..|+-.+.. ...|+||| .+||||+++..| .|.|+++ ++.+|+|++-..+++.++||+.||+||+++.+| .|
T Consensus 34 e~F~l~~~~----~g~v~Lrs-~~G~yls~~~~g--~l~~~~~-~~~~e~F~~e~~~~g~~al~~~~G~yl~~~~~g-~l 104 (119)
T cd00257 34 ETFTLEFDN----TGKYALRS-HDGKYLSADSDG--GVQLEGH-PNADCRFTLEFHGDGKWALRAENGRYLGGDGSG-TL 104 (119)
T ss_pred eEEEEEECC----CCeEEEEE-CCCcEEEEECCC--CEEecCC-CCCCcEEEEEECCCCeEEEEcCCCCEEeecCCC-eE
Confidence 456643333 47899998 799999999866 5899999 999999997667779999999999999998877 59
Q ss_pred EEeecCCCCCceEEE
Q 009560 133 SATAKSPSTPETFEI 147 (532)
Q Consensus 133 ~a~~~~~~~~e~F~~ 147 (532)
.|++++++++|.|.+
T Consensus 105 ~~~~~~~~~~e~f~~ 119 (119)
T cd00257 105 KASSETVGPDELFEL 119 (119)
T ss_pred EEecCCCCccceecC
Confidence 999999999999974
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.4e-09 Score=109.64 Aligned_cols=121 Identities=17% Similarity=0.281 Sum_probs=85.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+.|+..||++|+|+||+.- . |+. .+.++.|.++||.|+.++-... . ..+...+. ....
T Consensus 39 ~~d~~l~k~~G~N~iR~~h-----~---p~~----------~~~~~~cD~~GilV~~e~~~~~-~-~~~~~~~~--~~~~ 96 (298)
T PF02836_consen 39 ERDLELMKEMGFNAIRTHH-----Y---PPS----------PRFYDLCDELGILVWQEIPLEG-H-GSWQDFGN--CNYD 96 (298)
T ss_dssp HHHHHHHHHTT-SEEEETT-----S-----S----------HHHHHHHHHHT-EEEEE-S-BS-C-TSSSSTSC--TSCT
T ss_pred HHHHHHHHhcCcceEEccc-----c---cCc----------HHHHHHHhhcCCEEEEeccccc-c-CccccCCc--cccC
Confidence 7899999999999999832 1 111 2778899999999999875410 0 01111110 0011
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
-.++...+.+.+-++.+.+|++++|+|+.|.+.||+ ....+++++++.+|+.||+++|.....
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~~ 159 (298)
T PF02836_consen 97 ADDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYASN 159 (298)
T ss_dssp TTSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEETG
T ss_pred CCCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeeccc
Confidence 124677888899999999999999999999999999 567788999999999999999887643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=99.06 E-value=1e-09 Score=96.04 Aligned_cols=87 Identities=25% Similarity=0.396 Sum_probs=73.6
Q ss_pred cccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceE
Q 009560 53 SLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVV 132 (532)
Q Consensus 53 ~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~ 132 (532)
.+|+-..... +..|.||+ .+|||+|++..| .|+|++..++.|++|+|..- ++.+.||+.||+||++..+|. |
T Consensus 25 e~f~le~~~~---~~~v~lrs-~~GkYls~~~~G--~v~~~~~~~~~~~~F~i~~~-~~~~~~~~~nGkYl~~~~~g~-l 96 (111)
T PF06268_consen 25 ETFQLEFDDG---SYKVALRS-HNGKYLSVDSDG--SVVADSETPGPDEFFEIEWH-GGKVALRASNGKYLSAGPNGQ-L 96 (111)
T ss_dssp GSEEEEEETT---EEEEEEEC-TTSEEEEEETTS--EEEEEESSSSGGGCBEEEEE-TTEEEEECTTSCEEEEETTTE-E
T ss_pred EEEEEEEECC---CCEEEEEc-CCCCEEEEcCCC--eEEecCCCCCCCcEEEEEEC-CCEEEEECCCCCEEeeCCCCe-E
Confidence 6677432222 57778997 899999999886 79999999999999995555 888999999999999988885 9
Q ss_pred EEeecCCCCCceEEE
Q 009560 133 SATAKSPSTPETFEI 147 (532)
Q Consensus 133 ~a~~~~~~~~e~F~~ 147 (532)
.|++++|+++|.|++
T Consensus 97 ~a~~~~~~~~elf~~ 111 (111)
T PF06268_consen 97 KANATSPGKDELFEY 111 (111)
T ss_dssp EEEESSSSGGGEEEE
T ss_pred EEcCCCCCcceEEeC
Confidence 999999999999985
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.8e-08 Score=99.59 Aligned_cols=206 Identities=17% Similarity=0.214 Sum_probs=129.6
Q ss_pred cccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCC----hhhHHHHHHHHHHHH
Q 009560 250 IAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPA----SDYISQTLDVIDFLA 325 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~----~~~~~~~~~~w~~la 325 (532)
...+|.++ .| .++.+|+++++|+++||+| ..|..- .+. ..+.|.. ++..+.+.++++.++
T Consensus 4 ~~~ep~~G-~~---n~~~~D~~~~~a~~~gi~v--~gH~l~------W~~----~~P~W~~~~~~~~~~~~~~~~i~~v~ 67 (254)
T smart00633 4 DSTEPSRG-QF---NFSGADAIVNFAKENGIKV--RGHTLV------WHS----QTPDWVFNLSKETLLARLENHIKTVV 67 (254)
T ss_pred ccccCCCC-cc---ChHHHHHHHHHHHHCCCEE--EEEEEe------ecc----cCCHhhhcCCHHHHHHHHHHHHHHHH
Confidence 34455544 33 5899999999999999998 334320 010 1123432 356788999999999
Q ss_pred HHhCCCCcEEEEEeccCCCCCCCC---cccH-----HHHHHHHHHHHHhhCCCcEEEEeCCC-CCC--Cc---hhhh---
Q 009560 326 SRYAKHPALLGIELLNEPSAATVP---LDIL-----VPYYKQGYQIVRKYSPTAYVIVCQRI-GNA--DP---LELY--- 388 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~~~~~---~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~-~~~--~~---~~~~--- 388 (532)
+||++. +..||++|||...+.. ...| .+|+..+++++|+++|+..+++.+.- -+. .. ..+.
T Consensus 68 ~ry~g~--i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy~~~~~~~k~~~~~~~v~~l 145 (254)
T smart00633 68 GRYKGK--IYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEPNAKRQAIYELVKKL 145 (254)
T ss_pred HHhCCc--ceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEeccCCcCccHHHHHHHHHHHHH
Confidence 999975 6679999999864211 0012 27889999999999999999987521 011 11 1111
Q ss_pred -hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHH
Q 009560 389 -QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSA 467 (532)
Q Consensus 389 -~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ 467 (532)
....+.+-+-+..|.+... .+. ..+ .+.+..+.+. |.||+|+|+...... +.+...+++++
T Consensus 146 ~~~g~~iDgiGlQ~H~~~~~------~~~----~~~----~~~l~~~~~~-g~pi~iTE~dv~~~~---~~~~qA~~~~~ 207 (254)
T smart00633 146 KAKGVPIDGIGLQSHLSLGS------PNI----AEI----RAALDRFASL-GLEIQITELDISGYP---NPQAQAADYEE 207 (254)
T ss_pred HHCCCccceeeeeeeecCCC------CCH----HHH----HHHHHHHHHc-CCceEEEEeecCCCC---cHHHHHHHHHH
Confidence 1113355666777876321 111 222 2334445444 789999999987532 22445566777
Q ss_pred HHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 468 QLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 468 ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
++.++-+ ...|.++|.+.. ...|.
T Consensus 208 ~l~~~~~~p~v~gi~~Wg~~d-~~~W~ 233 (254)
T smart00633 208 VFKACLAHPAVTGVTVWGVTD-KYSWL 233 (254)
T ss_pred HHHHHHcCCCeeEEEEeCCcc-CCccc
Confidence 7766654 457999999886 45664
|
|
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.4e-09 Score=100.11 Aligned_cols=100 Identities=21% Similarity=0.392 Sum_probs=63.8
Q ss_pred EEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEe-cCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEE
Q 009560 71 IKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRV-SESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIER 149 (532)
Q Consensus 71 ~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~-~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~ 149 (532)
+.+..||.|.++|.- ++ .......|.|...++ ++++|+||+.+|+|++|+..|. |+|+++++|+.|+|++|.
T Consensus 4 i~a~d~G~~t~~ePh---d~---~~~p~p~qV~va~~v~~~~~iafKs~~GkYLs~Dk~G~-v~a~sdAiGp~E~f~~V~ 76 (191)
T PF06229_consen 4 IEALDNGLFTTGEPH---DV---GEGPDPRQVWVATRVPGDEKIAFKSGHGKYLSCDKDGI-VSARSDAIGPQEQFEPVF 76 (191)
T ss_dssp EEE-TTS-EEE-------SS---S----TTT-EEEEE--SSS-EEEEETTS-BEEE-SSSB-EEE--SS--TTTBEEEE-
T ss_pred eeeeccCCccccCCC---cC---CCCCChhHeEEEEEecCCCceEeeccCccEEEEcCCCc-EEEEeecCCCceEEEEEE
Confidence 567788889998886 22 455668999999999 8888999999999999999996 999999999999999999
Q ss_pred cCCCcEEEEe-cCCceEEeccCceEEeCCC
Q 009560 150 NNDSRVHIKL-KSGTYLQATLGNQLTSDYP 178 (532)
Q Consensus 150 ~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~ 178 (532)
. +++..+.+ .|++||+++..+-+.|+-.
T Consensus 77 ~-~~~~a~~~~~~~~FLs~~~~~~i~a~s~ 105 (191)
T PF06229_consen 77 Q-DGKPALFSSSNNKFLSVDEEGDIRADSK 105 (191)
T ss_dssp S-TT--EEEE-TTS-BEEE-SSS-EEE--S
T ss_pred C-CCCeEEEecCCCeEEEEecccCeeeccc
Confidence 8 56777777 9999999998777777754
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=5.3e-09 Score=114.27 Aligned_cols=270 Identities=15% Similarity=0.158 Sum_probs=134.6
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCC----c----ChHHHHH
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFI----G----GSLEALD 269 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~----~----~~l~~Ld 269 (532)
+.+-|+.|-+.| .|...++..| ++.+..++ +.||..||+. +.+.+.-. .+. + =.+..||
T Consensus 20 l~~~W~~~~~~g--~a~~~l~~~~-----q~~l~~~~~~~gf~yvR~h---~l~~ddm~--~~~~~~~~~~~~Ynf~~lD 87 (486)
T PF01229_consen 20 LKHFWRFCVGSG--RANLLLRADW-----QEQLRELQEELGFRYVRFH---GLFSDDMM--VYSESDEDGIPPYNFTYLD 87 (486)
T ss_dssp --SGGGSEEEES---GGGGGBHHH-----HHHHHHHHCCS--SEEEES----TTSTTTT---EEEEETTEEEEE--HHHH
T ss_pred ccchhhhhcCCC--chHHHhhHHH-----HHHHHHHHhccCceEEEEE---eeccCchh--hccccccCCCCcCChHHHH
Confidence 556677774444 5666666666 56677776 7899999993 33322110 110 0 1599999
Q ss_pred HHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC----ChhhHHHHHHHHHHHHHH----hCC-CCcEEEEEec
Q 009560 270 NALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWP----ASDYISQTLDVIDFLASR----YAK-HPALLGIELL 340 (532)
Q Consensus 270 ~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~----~~~~~~~~~~~w~~la~r----y~~-~p~v~g~EL~ 340 (532)
++++...++||+++|.|--.|-.- .++. .....|. .|...+++.++++.+++| |+. ...-+-||++
T Consensus 88 ~i~D~l~~~g~~P~vel~f~p~~~----~~~~-~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiW 162 (486)
T PF01229_consen 88 QILDFLLENGLKPFVELGFMPMAL----ASGY-QTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIW 162 (486)
T ss_dssp HHHHHHHHCT-EEEEEE-SB-GGG----BSS---EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEES
T ss_pred HHHHHHHHcCCEEEEEEEechhhh----cCCC-CccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeC
Confidence 999999999999999998766311 0110 0111111 245566666666666555 542 2233569999
Q ss_pred cCCCCCC----CCcccHHHHHHHHHHHHHhhCCCcEEEEeCC--CCCCCc-hhhhhcc--CCCCcEEEEeeecccCCCcc
Q 009560 341 NEPSAAT----VPLDILVPYYKQGYQIVRKYSPTAYVIVCQR--IGNADP-LELYQAN--IGLHNIVVDLHYYNLFDTFF 411 (532)
Q Consensus 341 NEP~~~~----~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~--~~~~~~-~~~~~~~--~~~~nvv~s~H~Y~~f~~~~ 411 (532)
|||.... .+.+.+.++|+.++++||+++|+..| -+++ ++.... .+++.+. ...+-..+++|.|+.-....
T Consensus 163 NEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~p~~~v-GGp~~~~~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~ 241 (486)
T PF01229_consen 163 NEPDLKDFWWDGTPEEYFELYDATARAIKAVDPELKV-GGPAFAWAYDEWCEDFLEFCKGNNCPLDFISFHSYGTDSAED 241 (486)
T ss_dssp S-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH-TTSEE-EEEEEETT-THHHHHHHHHHHHCT---SEEEEEEE-BESESE
T ss_pred cCCCcccccCCCCHHHHHHHHHHHHHHHHHhCCCCcc-cCccccccHHHHHHHHHHHHhcCCCCCCEEEEEecccccccc
Confidence 9998742 23456889999999999999999764 3332 221111 2333221 23455789999998421100
Q ss_pred ccC---ChhhhHHHHHHHHHHHHHHHHhcC--CCcEEEeccCcccCCCCCCH--HHHHHHHHH-HHHHHHhCCCcEEEEc
Q 009560 412 VNM---STVDNILFIYKSREAQLQALNNAN--GPLVFIGEWVNEWNVTSGTQ--KDYQDFGSA-QLEVYNAASFGWAYWT 483 (532)
Q Consensus 412 ~~~---~~~~~i~~i~~~~~~~~~~~~~~~--g~pv~vGEwG~~~~~~~a~~--~~~~~~~~~-ql~~~~~~~~Gw~yW~ 483 (532)
... ..-...+.+...+......+.+.. ..|+.+.||+.......... .....|+-. .++..+..--+..||+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~~~l~~~sywt 321 (486)
T PF01229_consen 242 INENMYERIEDSRRLFPELKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAKNLLSNDGAFLDSFSYWT 321 (486)
T ss_dssp -SS-EEEEB--HHHHHHHHHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH-HHHHGGGT-SEEEES-
T ss_pred cchhHHhhhhhHHHHHHHHHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHHHHHHhhhhhhhhhhccc
Confidence 000 011112233333332223334443 35799999998653211111 122344333 5565553334688998
Q ss_pred ccC
Q 009560 484 LKN 486 (532)
Q Consensus 484 ~k~ 486 (532)
+..
T Consensus 322 ~sD 324 (486)
T PF01229_consen 322 FSD 324 (486)
T ss_dssp SBS
T ss_pred hhh
Confidence 875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.2e-08 Score=92.28 Aligned_cols=81 Identities=25% Similarity=0.359 Sum_probs=52.1
Q ss_pred cceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCce
Q 009560 66 GTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPET 144 (532)
Q Consensus 66 g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~ 144 (532)
-++|+||| .+|||||++.-| .|+|+++++|++|+|+++. .+++.++-. .|++|++++..+. +.|++.+++..|.
T Consensus 38 ~~~iafKs-~~GkYLs~Dk~G--~v~a~sdAiGp~E~f~~V~-~~~~~a~~~~~~~~FLs~~~~~~-i~a~s~~a~~~e~ 112 (191)
T PF06229_consen 38 DEKIAFKS-GHGKYLSCDKDG--IVSARSDAIGPQEQFEPVF-QDGKPALFSSSNNKFLSVDEEGD-IRADSKTAGENEM 112 (191)
T ss_dssp SS-EEEEE-TTS-BEEE-SSS--BEEE--SS--TTTBEEEE--STT--EEEE-TTS-BEEE-SSS--EEE--S---TTT-
T ss_pred CCceEeec-cCccEEEEcCCC--cEEEEeecCCCceEEEEEE-CCCCeEEEecCCCeEEEEecccC-eeeccccCCCCce
Confidence 37899999 799999999886 8999999999999999655 456666666 9999999998887 9999999999998
Q ss_pred EEEEEcC
Q 009560 145 FEIERNN 151 (532)
Q Consensus 145 F~~v~~~ 151 (532)
+.|--++
T Consensus 113 ~~iR~~~ 119 (191)
T PF06229_consen 113 IKIRSDA 119 (191)
T ss_dssp -EEEE-S
T ss_pred EEEEEec
Confidence 8876664
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.1e-07 Score=104.91 Aligned_cols=184 Identities=16% Similarity=0.216 Sum_probs=117.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc----CCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL----HAAPGSQNGMEHSASRD 303 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl----H~~pGsqn~~~~sg~~~ 303 (532)
++|++.||++|+|+||+.- . |..+ +..+.|-++||+|+-+. |.. ...+
T Consensus 358 ~~dl~lmK~~g~NavR~sH-----y---P~~~----------~fydlcDe~GllV~dE~~~e~~g~-------~~~~--- 409 (1021)
T PRK10340 358 EKDIQLMKQHNINSVRTAH-----Y---PNDP----------RFYELCDIYGLFVMAETDVESHGF-------ANVG--- 409 (1021)
T ss_pred HHHHHHHHHCCCCEEEecC-----C---CCCH----------HHHHHHHHCCCEEEECCcccccCc-------cccc---
Confidence 6899999999999999841 1 1112 66789999999999875 321 1111
Q ss_pred CCCCC--CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC
Q 009560 304 GTTDW--PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN 381 (532)
Q Consensus 304 g~~~W--~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~ 381 (532)
...| .++...+.+.+-.+.+.+|++++|+|+.|.+.||.... . ..+++++.+|+.||+++|..++..
T Consensus 410 -~~~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~g----~----~~~~~~~~~k~~DptR~v~~~~~~-- 478 (1021)
T PRK10340 410 -DISRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYG----C----NIRAMYHAAKALDDTRLVHYEEDR-- 478 (1021)
T ss_pred -ccccccCCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCcccc----H----HHHHHHHHHHHhCCCceEEeCCCc--
Confidence 0011 13455667777788999999999999999999998532 1 236889999999999998764311
Q ss_pred CCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHh-cCCCcEEEeccCcccCCCCCCHHH
Q 009560 382 ADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNN-ANGPLVFIGEWVNEWNVTSGTQKD 460 (532)
Q Consensus 382 ~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~-~~g~pv~vGEwG~~~~~~~a~~~~ 460 (532)
. ...-.|++. +|.. .+ .+ ....+ ...+|+++.|++-.+.......++
T Consensus 479 -~---------~~~~Dv~~~-~Y~~---------~~----~~--------~~~~~~~~~kP~i~~Ey~hamgn~~g~~~~ 526 (1021)
T PRK10340 479 -D---------AEVVDVIST-MYTR---------VE----LM--------NEFGEYPHPKPRILCEYAHAMGNGPGGLTE 526 (1021)
T ss_pred -C---------ccccceecc-ccCC---------HH----HH--------HHHHhCCCCCcEEEEchHhccCCCCCCHHH
Confidence 0 111234443 2332 11 11 11112 235899999999765433333444
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 461 YQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 461 ~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
|...++. + ..-+|-+.|.|...
T Consensus 527 yw~~~~~----~-p~l~GgfiW~~~D~ 548 (1021)
T PRK10340 527 YQNVFYK----H-DCIQGHYVWEWCDH 548 (1021)
T ss_pred HHHHHHh----C-CceeEEeeeecCcc
Confidence 4443322 2 26679999998873
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.6e-06 Score=102.28 Aligned_cols=115 Identities=16% Similarity=0.243 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDGTT 306 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g~~ 306 (532)
++||+.||++|+|+||+.- . |..| +..+.|-++||+|+-+.-.. .|.. ..+ .
T Consensus 374 ~~di~lmK~~g~NaVR~sH-----y---P~~p----------~fydlcDe~GilV~dE~~~e~hg~~----~~~-----~ 426 (1027)
T PRK09525 374 VQDILLMKQHNFNAVRCSH-----Y---PNHP----------LWYELCDRYGLYVVDEANIETHGMV----PMN-----R 426 (1027)
T ss_pred HHHHHHHHHCCCCEEEecC-----C---CCCH----------HHHHHHHHcCCEEEEecCccccCCc----ccc-----C
Confidence 5799999999999999941 1 1112 56799999999999885210 0100 000 0
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
...+++..+.+.+-++.+.+|.+++|+|+.|.+.||+... ....++++.+|+.||+++|...+
T Consensus 427 ~~~dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~g--------~~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 427 LSDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHG--------ANHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCcC--------hhHHHHHHHHHhhCCCCcEEECC
Confidence 1123566777888899999999999999999999998532 11367889999999999998764
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.3e-06 Score=88.59 Aligned_cols=137 Identities=15% Similarity=0.186 Sum_probs=87.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++.+++||++|+|+|-++|.| ..-++.++ .|+=+....|++.++.|+++||+|||-.--.- +.-++.. |.+.
T Consensus 27 ~~~l~k~ka~G~n~v~~yv~W-~~he~~~g-~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi--~aE~~~g----G~P~ 98 (319)
T PF01301_consen 27 RDRLQKMKAAGLNTVSTYVPW-NLHEPEEG-QFDFTGNRDLDRFLDLAQENGLYVILRPGPYI--CAEWDNG----GLPA 98 (319)
T ss_dssp HHHHHHHHHTT-SEEEEE--H-HHHSSBTT-B---SGGG-HHHHHHHHHHTT-EEEEEEES-----TTBGGG----G--G
T ss_pred HHHHHHHHhCCcceEEEeccc-cccCCCCC-cccccchhhHHHHHHHHHHcCcEEEeccccee--cccccch----hhhh
Confidence 799999999999999999997 45566554 66666678899999999999999998743211 1111111 2333
Q ss_pred CC-----------ChhhHHHHHHHHHHHHHHhC-----CCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 308 WP-----------ASDYISQTLDVIDFLASRYA-----KHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W~-----------~~~~~~~~~~~w~~la~ry~-----~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
|. ++...+...++++.|.+..+ +-..|+++++=||... ...-.++.+.+.++.|+...+.
T Consensus 99 Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~----~~~~~~Y~~~l~~~~~~~g~~~ 174 (319)
T PF01301_consen 99 WLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGS----YGTDRAYMEALKDAYRDWGIDP 174 (319)
T ss_dssp GGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGC----TSS-HHHHHHHHHHHHHTT-SS
T ss_pred hhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCC----CcccHhHHHHHHHHHHHhhCcc
Confidence 42 35666777777777766533 3346889999999862 3355778888888999988874
Q ss_pred EEEEe
Q 009560 372 YVIVC 376 (532)
Q Consensus 372 ~Viv~ 376 (532)
.+...
T Consensus 175 ~~~~t 179 (319)
T PF01301_consen 175 VLLYT 179 (319)
T ss_dssp SBEEE
T ss_pred ceeec
Confidence 44443
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.3e-06 Score=86.30 Aligned_cols=134 Identities=12% Similarity=0.129 Sum_probs=83.0
Q ss_pred HHHHHHHHHcCCCEEEEccccc-ccc-CC--CC--------C-----CCCCcChHHHHHHHHHHHHHcCCEEEEE-cCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWW-IAF-DP--DP--------P-----APFIGGSLEALDNALSWAEAYNIKCIID-LHAA 289 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww-~~~-~~--~~--------~-----~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-lH~~ 289 (532)
+.-++..|+.|||+||+-+.-. ... .+ .+ + ..+++.+++.+|++|+.|.++||.+-|= +|..
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~ 112 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGC 112 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS-HH
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECC
Confidence 5668889999999999977332 111 00 00 0 1135679999999999999999998654 4422
Q ss_pred CCCCCCCCCCCCCCCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHh
Q 009560 290 PGSQNGMEHSASRDGTTDWPA---SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRK 366 (532)
Q Consensus 290 pGsqn~~~~sg~~~g~~~W~~---~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~ 366 (532)
+.. ...|.. .-..+...++++.|++||+..|+++ |-|.||= .....-.+.++++.+.||+
T Consensus 113 ~~~------------~~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~----~~~~~~~~~w~~~~~~i~~ 175 (289)
T PF13204_consen 113 PYV------------PGTWGFGPNIMPPENAERYGRYVVARYGAYPNVI-WILGGDY----FDTEKTRADWDAMARGIKE 175 (289)
T ss_dssp HHH-------------------TTSS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS------TTSSHHHHHHHHHHHHH
T ss_pred ccc------------cccccccccCCCHHHHHHHHHHHHHHHhcCCCCE-EEecCcc----CCCCcCHHHHHHHHHHHHh
Confidence 110 011211 2346778899999999999999988 8899997 1234566677899999999
Q ss_pred hCCCcEEEEeCC
Q 009560 367 YSPTAYVIVCQR 378 (532)
Q Consensus 367 ~~~~~~Viv~~~ 378 (532)
.+|.+++.+++.
T Consensus 176 ~dp~~L~T~H~~ 187 (289)
T PF13204_consen 176 NDPYQLITIHPC 187 (289)
T ss_dssp H--SS-EEEEE-
T ss_pred hCCCCcEEEeCC
Confidence 999888888864
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.3e-07 Score=77.65 Aligned_cols=78 Identities=23% Similarity=0.356 Sum_probs=49.0
Q ss_pred HHHHhCCCCcEEEEEeccC-CCCC---------CCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhccCC
Q 009560 324 LASRYAKHPALLGIELLNE-PSAA---------TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIG 393 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NE-P~~~---------~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~~~~ 393 (532)
+.++|++++.|++|||.|| |... ....+.+.+|++++.+.||+++|+++|.++. ++ .+...+... ..
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~-~~-~~~~~~~~~-~~ 77 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGF-WG-GDWEDLEQL-QA 77 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B----S-TTHHHHS---
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeec-cc-CCHHHHHHh-ch
Confidence 4678999999999999999 6621 1134678999999999999999999987653 32 222233333 22
Q ss_pred CCcEEEEeeec
Q 009560 394 LHNIVVDLHYY 404 (532)
Q Consensus 394 ~~nvv~s~H~Y 404 (532)
..-.++++|.|
T Consensus 78 ~~~DvisfH~Y 88 (88)
T PF12876_consen 78 ENLDVISFHPY 88 (88)
T ss_dssp TT-SSEEB-EE
T ss_pred hcCCEEeeecC
Confidence 45578999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.5e-05 Score=79.23 Aligned_cols=216 Identities=20% Similarity=0.233 Sum_probs=93.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+.|+..|+++|+|+||+ | ..+|... =|..++.+.+.||||||||-...++-+.. .....
T Consensus 56 ~rDi~~l~~LgiNtIRV---Y--~vdp~~n----------Hd~CM~~~~~aGIYvi~Dl~~p~~sI~r~------~P~~s 114 (314)
T PF03198_consen 56 KRDIPLLKELGINTIRV---Y--SVDPSKN----------HDECMSAFADAGIYVILDLNTPNGSINRS------DPAPS 114 (314)
T ss_dssp HHHHHHHHHHT-SEEEE---S-----TTS------------HHHHHHHHHTT-EEEEES-BTTBS--TT------S----
T ss_pred HHhHHHHHHcCCCEEEE---E--EeCCCCC----------HHHHHHHHHhCCCEEEEecCCCCccccCC------CCcCC
Confidence 78999999999999998 2 2344321 35778888899999999998754333211 11123
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHH----HHHhhCCCcEEEEeCCCCCCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQ----IVRKYSPTAYVIVCQRIGNAD 383 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~----aIR~~~~~~~Viv~~~~~~~~ 383 (532)
|. ....+++ ..+.+.|+.+++++||-.-||-.... .......+.+++++ -|++.+. +.|-|+ ...+|
T Consensus 115 w~-~~l~~~~----~~vid~fa~Y~N~LgFf~GNEVin~~-~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVG--YsaaD 185 (314)
T PF03198_consen 115 WN-TDLLDRY----FAVIDAFAKYDNTLGFFAGNEVINDA-SNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVG--YSAAD 185 (314)
T ss_dssp ---HHHHHHH----HHHHHHHTT-TTEEEEEEEESSS-ST-T-GGGHHHHHHHHHHHHHHHHHSSS-----EE--EEE--
T ss_pred CC-HHHHHHH----HHHHHHhccCCceEEEEecceeecCC-CCcccHHHHHHHHHHHHHHHHhcCC-CCCcee--EEccC
Confidence 42 2333444 44455677889999999999976532 22234445555444 4455443 444454 11112
Q ss_pred c----h---hhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC
Q 009560 384 P----L---ELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS 455 (532)
Q Consensus 384 ~----~---~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~ 455 (532)
. . .++... ....-..+.+-.|.. .+.+. +-...+......++. ...|+|.+|||+....+.
T Consensus 186 ~~~~r~~~a~Yl~Cg~~~~~iDf~g~N~Y~W-----Cg~St-----f~~SGy~~l~~~f~~-y~vPvffSEyGCn~~~pR 254 (314)
T PF03198_consen 186 DAEIRQDLANYLNCGDDDERIDFFGLNSYEW-----CGDST-----FETSGYDRLTKEFSN-YSVPVFFSEYGCNTVTPR 254 (314)
T ss_dssp -TTTHHHHHHHTTBTT-----S-EEEEE---------SS-------HHHHSHHHHHHHHTT--SS-EEEEEE---SSSS-
T ss_pred ChhHHHHHHHHhcCCCcccccceeeecccee-----cCCCc-----cccccHHHHHHHhhC-CCCCeEEcccCCCCCCCc
Confidence 1 1 122221 112334555555642 11111 111112222333333 357899999999632111
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCC
Q 009560 456 GTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDR 488 (532)
Q Consensus 456 a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~ 488 (532)
.=.+.-.-|-..+.++|. |-..-.|-.|.
T Consensus 255 ~f~ev~aly~~~Mt~v~S----GGivYEy~~e~ 283 (314)
T PF03198_consen 255 TFTEVPALYSPEMTDVWS----GGIVYEYFQEA 283 (314)
T ss_dssp --THHHHHTSHHHHTTEE----EEEES-SB--S
T ss_pred cchHhHHhhCccchhhee----ceEEEEEeccC
Confidence 000111223334444454 66666666653
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.1e-05 Score=72.63 Aligned_cols=137 Identities=25% Similarity=0.339 Sum_probs=96.7
Q ss_pred HHHHHHHHHcCCCEEEEcc-cccc-ccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPV-GWWI-AFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv-~ww~-~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
+++|+.|++.|+++|=|-- ++.. ...|.. +..+....-+.|+.+++.|.++||+|+|.|...|. +...
T Consensus 23 ~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~----~w~~---- 94 (166)
T PF14488_consen 23 REEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPD----YWDQ---- 94 (166)
T ss_pred HHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCch----hhhc----
Confidence 7999999999999995431 1100 001111 11122345678999999999999999999986532 1111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
+...| ..+.-..+.+.+.++|++++++.||=|-.|+.... ..-.+.++.+.+.++++.++.+|++++.+
T Consensus 95 ~~~~~----~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~~---~~~~~~~~~l~~~lk~~s~~~Pv~ISpf~ 163 (166)
T PF14488_consen 95 GDLDW----EAERNKQVADELWQRYGHHPSFYGWYIPYEIDDYN---WNAPERFALLGKYLKQISPGKPVMISPFI 163 (166)
T ss_pred cCHHH----HHHHHHHHHHHHHHHHcCCCCCceEEEecccCCcc---cchHHHHHHHHHHHHHhCCCCCeEEecCc
Confidence 12222 34445568889999999999999999999998642 33467778888999999999999998744
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.5e-05 Score=79.92 Aligned_cols=233 Identities=15% Similarity=0.257 Sum_probs=137.5
Q ss_pred HHHHHHHcCCCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEE---EEcCC-CCCCCCCCCCCCCCC
Q 009560 230 DFNFLYRHGINTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI---IDLHA-APGSQNGMEHSASRD 303 (532)
Q Consensus 230 d~~~la~~G~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VI---LDlH~-~pGsqn~~~~sg~~~ 303 (532)
....+-..-||.|=.. +- |...++.++ .+ .++..|++++||+++||.|- |=.|. .|. |-..
T Consensus 26 ~~~~~~~~~Fn~~t~eN~~K-w~~~e~~~g-~~---~~~~~D~~~~~a~~~g~~vrGH~LvW~~~~P~----w~~~---- 92 (320)
T PF00331_consen 26 RYRELFAKHFNSVTPENEMK-WGSIEPEPG-RF---NFESADAILDWARENGIKVRGHTLVWHSQTPD----WVFN---- 92 (320)
T ss_dssp HHHHHHHHH-SEEEESSTTS-HHHHESBTT-BE---E-HHHHHHHHHHHHTT-EEEEEEEEESSSS-H----HHHT----
T ss_pred HHHHHHHHhCCeeeeccccc-hhhhcCCCC-cc---CccchhHHHHHHHhcCcceeeeeEEEcccccc----eeee----
Confidence 4555555668888664 33 334444433 33 57899999999999999976 44443 121 1000
Q ss_pred CCCCCCCh---hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC-----CcccH-----HHHHHHHHHHHHhhCCC
Q 009560 304 GTTDWPAS---DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV-----PLDIL-----VPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 304 g~~~W~~~---~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~-----~~~~l-----~~~~~~~~~aIR~~~~~ 370 (532)
...+... ...++..++++.+++||++...|..||++|||..... ....| .+|+..+++..|+++|+
T Consensus 93 -~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~ 171 (320)
T PF00331_consen 93 -LANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPN 171 (320)
T ss_dssp -STTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred -ccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCC
Confidence 0011112 2678888999999999998778999999999987532 01112 25888999999999999
Q ss_pred cEEEEeCCCCCCCc--hhhh-------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCc
Q 009560 371 AYVIVCQRIGNADP--LELY-------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPL 441 (532)
Q Consensus 371 ~~Viv~~~~~~~~~--~~~~-------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~p 441 (532)
..+++.+..--... ..+. ....+-+-+-+..|+-.... ...+. +.+..+.. .|.|
T Consensus 172 a~L~~NDy~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~-----------~~~i~----~~l~~~~~-~Gl~ 235 (320)
T PF00331_consen 172 AKLFYNDYNIESPAKRDAYLNLVKDLKARGVPIDGIGLQSHFDAGYP-----------PEQIW----NALDRFAS-LGLP 235 (320)
T ss_dssp SEEEEEESSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEEEEEETTSS-----------HHHHH----HHHHHHHT-TTSE
T ss_pred cEEEeccccccchHHHHHHHHHHHHHHhCCCccceechhhccCCCCC-----------HHHHH----HHHHHHHH-cCCc
Confidence 99999753211111 1121 11234577889999865411 22232 23334433 4789
Q ss_pred EEEeccCcccCCCCC---CHHHHHHHHHHHHHHHHhC----CCcEEEEcccCCCCCCch
Q 009560 442 VFIGEWVNEWNVTSG---TQKDYQDFGSAQLEVYNAA----SFGWAYWTLKNDRKHWDF 493 (532)
Q Consensus 442 v~vGEwG~~~~~~~a---~~~~~~~~~~~ql~~~~~~----~~Gw~yW~~k~e~~~Ws~ 493 (532)
|.|+|+-........ ......+++++.+.++-+. .-|.++|.+.. ...|--
T Consensus 236 i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D-~~sW~~ 293 (320)
T PF00331_consen 236 IHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTD-GYSWRP 293 (320)
T ss_dssp EEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBT-TGSTTG
T ss_pred eEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCC-CCcccC
Confidence 999999876432211 1233445566666666443 46999999887 344543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.8e-05 Score=86.78 Aligned_cols=141 Identities=19% Similarity=0.229 Sum_probs=94.4
Q ss_pred ccccCCHHHHHHHHHcCCCEEEE-ccccccccCCCCCCCCCcChHHHHHHH-HHHHHHcCCEEEEEcCCCC-CCCCCCCC
Q 009560 222 RNTFITIEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFIGGSLEALDNA-LSWAEAYNIKCIIDLHAAP-GSQNGMEH 298 (532)
Q Consensus 222 w~t~ite~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~~~~l~~Ld~~-v~~a~k~Gi~VILDlH~~p-Gsqn~~~~ 298 (532)
|..-+-++|++.||++|+|+||+ .|.| ...+|..+ .|+ +..+|.. ++.|.+.|++|||--- | |....|..
T Consensus 27 ~p~~~w~ddl~~mk~~G~N~V~ig~faW-~~~eP~eG-~fd---f~~~D~~~l~~a~~~Gl~vil~t~--P~g~~P~Wl~ 99 (673)
T COG1874 27 WPRETWMDDLRKMKALGLNTVRIGYFAW-NLHEPEEG-KFD---FTWLDEIFLERAYKAGLYVILRTG--PTGAPPAWLA 99 (673)
T ss_pred CCHHHHHHHHHHHHHhCCCeeEeeeEEe-eccCcccc-ccC---cccchHHHHHHHHhcCceEEEecC--CCCCCchHHh
Confidence 44434489999999999999999 6665 66677665 443 3356666 9999999999999652 2 11111111
Q ss_pred C-----------CCCCCCC-----CCCChhhHHHHHHHHHHHHHH-hCCCCcEEEEEeccCCCC-C---CCCcccHHHHH
Q 009560 299 S-----------ASRDGTT-----DWPASDYISQTLDVIDFLASR-YAKHPALLGIELLNEPSA-A---TVPLDILVPYY 357 (532)
Q Consensus 299 s-----------g~~~g~~-----~W~~~~~~~~~~~~w~~la~r-y~~~p~v~g~EL~NEP~~-~---~~~~~~l~~~~ 357 (532)
. +...... +..++.+++....+.++|++| |++.++|++|.+-||=-+ + ......++.|.
T Consensus 100 ~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wL 179 (673)
T COG1874 100 KKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWL 179 (673)
T ss_pred cCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHHHHHH
Confidence 1 1111111 223566788888899999999 999999999999999433 1 12344566677
Q ss_pred HHHHHHHHhhCC
Q 009560 358 KQGYQIVRKYSP 369 (532)
Q Consensus 358 ~~~~~aIR~~~~ 369 (532)
++-+..+...+.
T Consensus 180 k~~yg~l~~ln~ 191 (673)
T COG1874 180 KKGYGSLDNLNE 191 (673)
T ss_pred HhCcchHHhhhh
Confidence 777765555544
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0012 Score=67.12 Aligned_cols=199 Identities=18% Similarity=0.186 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC
Q 009560 264 SLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE 342 (532)
.++.=|.+++.|++|||.+ --|+. ..+|....-.+ .++..+...+...+.+..+.+||++. +..||++||
T Consensus 80 ~Fe~AD~ia~FAr~h~m~l--hGHtLvW~~q~P~W~~~-----~e~~~~~~~~~~e~hI~tV~~rYkg~--~~sWDVVNE 150 (345)
T COG3693 80 NFEAADAIANFARKHNMPL--HGHTLVWHSQVPDWLFG-----DELSKEALAKMVEEHIKTVVGRYKGS--VASWDVVNE 150 (345)
T ss_pred CccchHHHHHHHHHcCCee--ccceeeecccCCchhhc-----cccChHHHHHHHHHHHHHHHHhccCc--eeEEEeccc
Confidence 4788899999999999873 23332 12222211111 11334577888889999999999985 788999999
Q ss_pred CCCCCCC--c------ccHHHHHHHHHHHHHhhCCCcEEEEeCC-CCCCCc----------hhhhhccCCCCcEEEEeee
Q 009560 343 PSAATVP--L------DILVPYYKQGYQIVRKYSPTAYVIVCQR-IGNADP----------LELYQANIGLHNIVVDLHY 403 (532)
Q Consensus 343 P~~~~~~--~------~~l~~~~~~~~~aIR~~~~~~~Viv~~~-~~~~~~----------~~~~~~~~~~~nvv~s~H~ 403 (532)
|.....+ . -.-.++++.+...-|+.+|++.+++-+. .. .++ .++..-..+-+-+-+..|+
T Consensus 151 ~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~NDY~ie-~~~~kr~~~~nlI~~LkekG~pIDgiG~QsH~ 229 (345)
T COG3693 151 AVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVINDYSIE-GNPAKRNYVLNLIEELKEKGAPIDGIGIQSHF 229 (345)
T ss_pred ccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeeccccc-CChHHHHHHHHHHHHHHHCCCCccceeeeeee
Confidence 9873211 1 1234578899999999999999888764 22 122 2222222445778899993
Q ss_pred cccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC-CCCCCHHHHHHH----HHHHHHHHH--hCC
Q 009560 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN-VTSGTQKDYQDF----GSAQLEVYN--AAS 476 (532)
Q Consensus 404 Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~-~~~a~~~~~~~~----~~~ql~~~~--~~~ 476 (532)
=. .+ .+.+ .. ...+..+.+. |.|++|+|+=..-. ....+...++.- .+.....+. ..-
T Consensus 230 ~~----~~--~~~~----~~----~~a~~~~~k~-Gl~i~VTELD~~~~~P~~~~p~~~~~~~~~~~~~f~~~~~~~~~v 294 (345)
T COG3693 230 SG----DG--PSIE----KM----RAALLKFSKL-GLPIYVTELDMSDYTPDSGAPRLYLQKAASRAKAFLLLLLNPNQV 294 (345)
T ss_pred cC----CC--CCHH----HH----HHHHHHHhhc-CCCceEEEeeeeccCCCCccHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21 11 1111 11 1234444555 89999999976532 222223332221 111211111 124
Q ss_pred CcEEEEcccCC
Q 009560 477 FGWAYWTLKND 487 (532)
Q Consensus 477 ~Gw~yW~~k~e 487 (532)
-+-++|.+...
T Consensus 295 ~~it~WGi~D~ 305 (345)
T COG3693 295 KAITFWGITDR 305 (345)
T ss_pred ceEEEeeeccC
Confidence 58899999874
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0025 Score=66.78 Aligned_cols=210 Identities=15% Similarity=0.173 Sum_probs=98.4
Q ss_pred HHHHHHHHcCCEEEEEcCCC-CC--CCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCC
Q 009560 270 NALSWAEAYNIKCIIDLHAA-PG--SQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSA 345 (532)
Q Consensus 270 ~~v~~a~k~Gi~VILDlH~~-pG--sqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~ 345 (532)
.+++.|+++|+..++-+-.. |+ ..||...++.. + ..=..++..+.+.+++..++++|++.. .+--++.+|||..
T Consensus 108 wfL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~~~-~-~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~ 185 (384)
T PF14587_consen 108 WFLKAAKERGVNIFEAFSNSPPWWMTKNGSASGGDD-G-SDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQW 185 (384)
T ss_dssp HHHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S-S-S-S-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS
T ss_pred HHHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCCCc-c-ccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCC
Confidence 36789999999988865544 43 23333322211 1 222346789999999999999996543 5567889999986
Q ss_pred C---------CCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC--C----CC--CCc------hhhhhcc-----CCCCcE
Q 009560 346 A---------TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR--I----GN--ADP------LELYQAN-----IGLHNI 397 (532)
Q Consensus 346 ~---------~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~--~----~~--~~~------~~~~~~~-----~~~~nv 397 (532)
. ..+.+...++++.+..++++.+.+..|++++. + .. .++ ..|+... ...++|
T Consensus 186 ~W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi~~l~~v 265 (384)
T PF14587_consen 186 NWAGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDSSTYIGDLPNV 265 (384)
T ss_dssp -GG--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTSTT--TT-TTE
T ss_pred CCCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCchhhhhccccc
Confidence 3 12456778899999999999999887777631 1 10 010 2222211 123343
Q ss_pred --EEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcC--CCcEEEeccCcccCCC----CCC--HH---HHHHH
Q 009560 398 --VVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNAN--GPLVFIGEWVNEWNVT----SGT--QK---DYQDF 464 (532)
Q Consensus 398 --v~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~--g~pv~vGEwG~~~~~~----~a~--~~---~~~~~ 464 (532)
+++-|.|-. .. +. +.+.+.|...... .++. +..++..||+..-+.. +.. ++ ++.-|
T Consensus 266 ~~~i~~HsYwt--~~----~~----~~l~~~R~~~~~~-~~~~~~~~~~wqtE~~il~~~~~~~~~~g~~~~~~m~~aLy 334 (384)
T PF14587_consen 266 PNIISGHSYWT--DS----PW----DDLRDIRKQLADK-LDKYSPGLKYWQTEYCILGDNYEIIEGGGYDRDLGMDTALY 334 (384)
T ss_dssp EEEEEE--TT---SS----SH----HHHHHHHHHHHHH-HHTTSS--EEEE----S----TTT-SSS-HHHHHHH--HHH
T ss_pred hhheeeccccc--CC----CH----HHHHHHHHHHHHH-HHhhCcCCceeeeeeeeccCCcccccCCCcccchhHHHHHH
Confidence 688999953 21 11 2333333322223 3344 6779999998753211 111 11 22345
Q ss_pred HHHHH--HHHHhCCCcEEEEcccCCCCCCchHh
Q 009560 465 GSAQL--EVYNAASFGWAYWTLKNDRKHWDFEW 495 (532)
Q Consensus 465 ~~~ql--~~~~~~~~Gw~yW~~k~e~~~Ws~~~ 495 (532)
+..++ |+-....-+|.||.--. .|+|+.
T Consensus 335 ~arviH~DL~~anassW~wW~a~~---~~~ykd 364 (384)
T PF14587_consen 335 VARVIHNDLTYANASSWQWWTAIS---PYDYKD 364 (384)
T ss_dssp HHHHHHHHHHTS--SEEEEEESEE---SS--SS
T ss_pred HHHHHHhhhhhcccchhHHHHHhc---cccccC
Confidence 55444 33333567999997654 566654
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0011 Score=75.70 Aligned_cols=143 Identities=10% Similarity=0.105 Sum_probs=101.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++++|++|+|+|=.-|.| ..-+|.++ .|+=+....|.+.++.|++.||+|||=.--+ -+--|+.. |.+.
T Consensus 62 ~d~L~k~Ka~GlNtV~tYV~W-n~HEp~~G-~~dF~G~~DL~~Fl~la~e~GLyvilRpGPY--IcAEw~~G----GlP~ 133 (840)
T PLN03059 62 PDLIQKAKDGGLDVIQTYVFW-NGHEPSPG-NYYFEDRYDLVKFIKVVQAAGLYVHLRIGPY--ICAEWNFG----GFPV 133 (840)
T ss_pred HHHHHHHHHcCCCeEEEEecc-cccCCCCC-eeeccchHHHHHHHHHHHHcCCEEEecCCcc--eeeeecCC----CCch
Confidence 799999999999999999987 45566554 6666678899999999999999999953211 11112221 2333
Q ss_pred CC-----------ChhhHHHHHHHHHHHHHHhC-------CCCcEEEEEeccCCCCCC-CCcccHHHHHHHHHHHHHhhC
Q 009560 308 WP-----------ASDYISQTLDVIDFLASRYA-------KHPALLGIELLNEPSAAT-VPLDILVPYYKQGYQIVRKYS 368 (532)
Q Consensus 308 W~-----------~~~~~~~~~~~w~~la~ry~-------~~p~v~g~EL~NEP~~~~-~~~~~l~~~~~~~~~aIR~~~ 368 (532)
|. ++...++..++++.|..+.+ +-..|++.++=||=..-. .....-++|++.+.++.++.+
T Consensus 134 WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~G 213 (840)
T PLN03059 134 WLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLG 213 (840)
T ss_pred hhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcC
Confidence 42 35677788888888887764 234688899999953210 001233778888888899999
Q ss_pred CCcEEEEeCC
Q 009560 369 PTAYVIVCQR 378 (532)
Q Consensus 369 ~~~~Viv~~~ 378 (532)
.+.+++.+++
T Consensus 214 i~VPl~t~dg 223 (840)
T PLN03059 214 TGVPWVMCKQ 223 (840)
T ss_pred CCcceEECCC
Confidence 9988888764
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0017 Score=58.80 Aligned_cols=104 Identities=26% Similarity=0.402 Sum_probs=68.2
Q ss_pred ccccceEEEEEecCCeEEEEecCCCceeEE--cCCCCC-CcceEEEEEecCCeEEEEecCCeEEEEeCCC-------c-e
Q 009560 63 MLDGTQVQIKSVTLEKYVCAESGGGTDVSV--TRDVAS-SWETFTLWRVSESEFQFRTSQGQFLTCDGEG-------C-V 131 (532)
Q Consensus 63 ~~~g~~v~~~s~~~~~yv~ae~gg~~~l~a--nr~~~~-~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g-------~-~ 131 (532)
|-||.-|.|+| ..|||++|+-.| ..|.- +|.+.. .|.-= ++.-+.+-+-||++-|+|+++.+.- . .
T Consensus 4 F~d~~~VRLRS-~~~kYL~ADeDg-~~Vs~~~~~~s~na~W~Ve-~v~~~~~~v~L~saYGrYL~as~~~~~lG~~G~~v 80 (142)
T PF04601_consen 4 FPDGKHVRLRS-HHGKYLHADEDG-EGVSQDRRGASLNAAWTVE-RVPGSPNYVRLRSAYGRYLAASDEPALLGHTGRRV 80 (142)
T ss_pred cCCCCEEEEEe-cCCCEEEEcCCC-CeEEECCCCCCCcceEEEE-EecCCCCEEEEeeccCceEeccCCcCCCCCCCCEE
Confidence 45899999999 999999998875 33343 444432 34222 2222345689999999999997422 2 1
Q ss_pred EEEeecCCCCCceEEEEEcCCCcEEEEecCCceEEeccC
Q 009560 132 VSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLG 170 (532)
Q Consensus 132 ~~a~~~~~~~~e~F~~v~~~~~~v~i~a~nG~~l~a~~~ 170 (532)
++.....+...-.++-++. +..|.|+..+|+||-|..+
T Consensus 81 ~Q~~~~~~d~~~~Wepvr~-g~~V~Lr~~~gr~LRANG~ 118 (142)
T PF04601_consen 81 VQTDPDRLDSSVEWEPVRD-GFYVKLRHRSGRYLRANGG 118 (142)
T ss_pred EecCCccCCCCceEEEecC-CCEEEEEecCCceEEcCCC
Confidence 2222223333444556666 6789999999999988753
|
Some family members contain two copies of the region. |
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.011 Score=58.45 Aligned_cols=208 Identities=14% Similarity=0.127 Sum_probs=131.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+.|++.|+..+. .||+ | . . -...|+++...+.+.|++|+|-+.-.+-.
T Consensus 66 ~sDLe~l~~~t~-~IR~---Y-~----s--------DCn~le~v~pAa~~~g~kv~lGiw~tdd~--------------- 113 (305)
T COG5309 66 ASDLELLASYTH-SIRT---Y-G----S--------DCNTLENVLPAAEASGFKVFLGIWPTDDI--------------- 113 (305)
T ss_pred HhHHHHhccCCc-eEEE---e-e----c--------cchhhhhhHHHHHhcCceEEEEEeeccch---------------
Confidence 789999999988 8997 1 1 1 12347788899999999999987642100
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-CCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC-CCch
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN-ADPL 385 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~-~~~~ 385 (532)
....++ ....++ .-|...+.|.++-+-||-... .++.+++-+++.++-.++++.+-+.+|.-.+.|-. .+-.
T Consensus 114 ---~~~~~~--til~ay-~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~dsw~~~~~np 187 (305)
T COG5309 114 ---HDAVEK--TILSAY-LPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVDSWNVVINNP 187 (305)
T ss_pred ---hhhHHH--HHHHHH-hccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeecccceeeeCCh
Confidence 011221 111122 224556788889999997653 46788999999999999999998887765554421 1112
Q ss_pred hhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhc-CC-CcEEEeccCcccC-----CCCCCH
Q 009560 386 ELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNA-NG-PLVFIGEWVNEWN-----VTSGTQ 458 (532)
Q Consensus 386 ~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~-~g-~pv~vGEwG~~~~-----~~~a~~ 458 (532)
++.+ ..+.++.-.|.|.- ..+..+...... ..+++.+... ++ ++++|||-|=..+ ..-+++
T Consensus 188 ~l~~---~SDfia~N~~aYwd------~~~~a~~~~~f~---~~q~e~vqsa~g~~k~~~v~EtGWPS~G~~~G~a~pS~ 255 (305)
T COG5309 188 ELCQ---ASDFIAANAHAYWD------GQTVANAAGTFL---LEQLERVQSACGTKKTVWVTETGWPSDGRTYGSAVPSV 255 (305)
T ss_pred HHhh---hhhhhhcccchhcc------ccchhhhhhHHH---HHHHHHHHHhcCCCccEEEeeccCCCCCCccCCcCCCh
Confidence 3333 34677888888832 223322222111 2233333332 22 7899999984322 234567
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEccc
Q 009560 459 KDYQDFGSAQLEVYNAASFGWAYWTLK 485 (532)
Q Consensus 459 ~~~~~~~~~ql~~~~~~~~Gw~yW~~k 485 (532)
++...|+++.+..+.+.+..-++-.--
T Consensus 256 anq~~~~~~i~~~~~~~G~d~fvfeAF 282 (305)
T COG5309 256 ANQKIAVQEILNALRSCGYDVFVFEAF 282 (305)
T ss_pred hHHHHHHHHHHhhhhccCccEEEeeec
Confidence 788899999998888888877776433
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0034 Score=62.41 Aligned_cols=119 Identities=18% Similarity=0.226 Sum_probs=75.3
Q ss_pred EEeccCCCCCC---CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC--CCC---Cc----hhhhhccC-CCCcEEEEeee
Q 009560 337 IELLNEPSAAT---VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI--GNA---DP----LELYQANI-GLHNIVVDLHY 403 (532)
Q Consensus 337 ~EL~NEP~~~~---~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~--~~~---~~----~~~~~~~~-~~~nvv~s~H~ 403 (532)
+..+|||.... .+++...+.+++.++.+|. +... ++++.. .+. +. ..|+.... +..-.++++|.
T Consensus 69 ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~-l~sPa~~~~~~~~~~g~~Wl~~F~~~~~~~~~~D~iavH~ 145 (239)
T PF11790_consen 69 LLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVK-LGSPAVAFTNGGTPGGLDWLSQFLSACARGCRVDFIAVHW 145 (239)
T ss_pred eeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcE-EECCeecccCCCCCCccHHHHHHHHhcccCCCccEEEEec
Confidence 44899999853 5667777778888888884 4443 334432 211 11 23333333 55778999999
Q ss_pred cccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHh
Q 009560 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA 474 (532)
Q Consensus 404 Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~ 474 (532)
|.. +.+. +.+.+..+.+..++||+|+|||........+.++...|++..+..+++
T Consensus 146 Y~~--------~~~~--------~~~~i~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~~~~~~ld~ 200 (239)
T PF11790_consen 146 YGG--------DADD--------FKDYIDDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLRQALPWLDS 200 (239)
T ss_pred CCc--------CHHH--------HHHHHHHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 922 1111 112233344455689999999976434556778889999999988875
|
|
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0016 Score=74.97 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=81.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||.. ++ |+. ++..++|-++||.||-+.-.. .|..
T Consensus 324 ~~dl~lmk~~n~N~vRts-Hy----------P~~-------~~~ydLcDelGllV~~Ea~~~-------~~~~------- 371 (808)
T COG3250 324 ERDLKLMKEANMNSVRTS-HY----------PNS-------EEFYDLCDELGLLVIDEAMIE-------THGM------- 371 (808)
T ss_pred HHHHHHHHHcCCCEEEec-CC----------CCC-------HHHHHHHHHhCcEEEEecchh-------hcCC-------
Confidence 789999999999999985 22 222 166789999999999986542 1111
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
..+++..+....=++.+.+|-|++|+|+.|-+.||+..+. . ...++..+.+.++++++-.++
T Consensus 372 ~~~~~~~k~~~~~i~~mver~knHPSIiiWs~gNE~~~g~-~-------~~~~~~~~k~~d~~r~~~~~~ 433 (808)
T COG3250 372 PDDPEWRKEVSEEVRRMVERDRNHPSIIIWSLGNESGHGS-N-------HWALYRWFKASDPTRPVQYEG 433 (808)
T ss_pred CCCcchhHHHHHHHHHHHHhccCCCcEEEEeccccccCcc-c-------cHHHHHHHhhcCCccceeccC
Confidence 1235667778888899999999999999999999997531 1 135566677788887776654
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.016 Score=63.67 Aligned_cols=231 Identities=17% Similarity=0.157 Sum_probs=118.6
Q ss_pred HHcCCCEEEEccccccccCC------CCCC-CCCcChHHH-----HHHHHHHHHH--cCCEEEEEcCCCCCCC--CCC-C
Q 009560 235 YRHGINTVRIPVGWWIAFDP------DPPA-PFIGGSLEA-----LDNALSWAEA--YNIKCIIDLHAAPGSQ--NGM-E 297 (532)
Q Consensus 235 a~~G~N~VRIpv~ww~~~~~------~~~~-~~~~~~l~~-----Ld~~v~~a~k--~Gi~VILDlH~~pGsq--n~~-~ 297 (532)
.-+|++.+|+||+--.+... .+.. .+..-.++. +-.+|+.|++ -+|+++-..-.+|+.. |+- .
T Consensus 110 ~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSpWSpP~WMKtn~~~~ 189 (496)
T PF02055_consen 110 DGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASPWSPPAWMKTNGSMN 189 (496)
T ss_dssp TTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEES---GGGBTTSSSC
T ss_pred CCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEecCCCCHHHccCCcCc
Confidence 34799999999975433211 1110 010001211 1124444443 3599999999999742 221 1
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCC----------CCCcccHHHHHHH-HHHHHH
Q 009560 298 HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAA----------TVPLDILVPYYKQ-GYQIVR 365 (532)
Q Consensus 298 ~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~----------~~~~~~l~~~~~~-~~~aIR 365 (532)
..|...+.. .++..+.+.+++....+.|+... .|.++-+-|||... ..+++..+.|++. +..++|
T Consensus 190 g~g~l~g~~---~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~ 266 (496)
T PF02055_consen 190 GGGSLKGSL---GDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALR 266 (496)
T ss_dssp SS-BBSCGT---TSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHH
T ss_pred CCCccCCCC---CchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 112111111 24677888888888888998764 78899999999852 1345677888886 777999
Q ss_pred hhCC--CcEEEEeC-CCCC-CCc-hhhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCC
Q 009560 366 KYSP--TAYVIVCQ-RIGN-ADP-LELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439 (532)
Q Consensus 366 ~~~~--~~~Viv~~-~~~~-~~~-~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g 439 (532)
+.++ +..|++.+ .+.. .++ ...+.-+ ...--..+.+|.|.. +. ....++.+. .+...
T Consensus 267 ~~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g-~~------~~~~l~~~h----------~~~P~ 329 (496)
T PF02055_consen 267 KAGLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGG-DP------SPQALDQVH----------NKFPD 329 (496)
T ss_dssp TSTT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTC-S-------HCHHHHHHH----------HHSTT
T ss_pred hcCCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCC-Cc------hhhHHHHHH----------HHCCC
Confidence 9877 55555532 2211 111 1222211 112346799999964 10 111111111 12335
Q ss_pred CcEEEeccCcccCCCC-----CCHHHHHHHHHHHHHHHHhCCCcEEEEccc
Q 009560 440 PLVFIGEWVNEWNVTS-----GTQKDYQDFGSAQLEVYNAASFGWAYWTLK 485 (532)
Q Consensus 440 ~pv~vGEwG~~~~~~~-----a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k 485 (532)
+.++.+|-+......+ .+-+.-.+|....+..+.....||.+|.+-
T Consensus 330 k~l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~gw~~WNl~ 380 (496)
T PF02055_consen 330 KFLLFTEACCGSWNWDTSVDLGSWDRAERYAHDIIGDLNNWVSGWIDWNLA 380 (496)
T ss_dssp SEEEEEEEESS-STTS-SS-TTHHHHHHHHHHHHHHHHHTTEEEEEEEESE
T ss_pred cEEEeeccccCCCCcccccccccHHHHHHHHHHHHHHHHhhceeeeeeeee
Confidence 6689999765321111 112233567777777777677799999764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0025 Score=61.12 Aligned_cols=119 Identities=21% Similarity=0.370 Sum_probs=91.3
Q ss_pred eeeEecCCceeeecccCccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCC---CCCCcceEEEEEecCC
Q 009560 35 VRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRD---VASSWETFTLWRVSES 111 (532)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~---~~~~wE~f~~~~~~~~ 111 (532)
=.+||-|+|--+-- +++ +-| .|.++- ..|.|+.|+-.|...|-+--+ ....=|+|.+.-++++
T Consensus 29 ~~~~~~g~w~~~~~-----~~~-------~~g-~v~ie~-~~~~yl~a~dng~ft~g~ph~~~~gp~p~e~f~avki~ds 94 (246)
T KOG3962|consen 29 EDAVNDGGWWDANE-----LND-------IEG-TVAIEI-DDGTYLGAMDNGLFTLGAPHDEVDGPEPEEQFMAVKISDS 94 (246)
T ss_pred hhhhcCCcceeccc-----cce-------eeE-EEEEEe-cCceEEEEEecCceeeccCCccccCCCchhhEEEEEccCc
Confidence 36889999865321 111 233 556653 447788777666666666322 3346699999999999
Q ss_pred eEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEecCCceEEecc
Q 009560 112 EFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATL 169 (532)
Q Consensus 112 ~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a~nG~~l~a~~ 169 (532)
+++|++.=|+|++++..|- |++...++|.-|+|..|.. .+++.+-++||.+.-.+.
T Consensus 95 rIaLKsGyGKYlsinsdgl-vvg~qeAvG~~EQw~~vFq-~~r~a~~as~s~~~~~~e 150 (246)
T KOG3962|consen 95 RIALKSGYGKYLSINSDGL-VVGRQEAVGSREQWEPVFQ-EGRMALLASNSCFIRCNE 150 (246)
T ss_pred eEEecccccceeeecCCcc-EEEehhhcCcHhhchhhhh-ccceEEeeccceeEEech
Confidence 9999999999999999995 9999999999999999988 789999999999886643
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.055 Score=55.75 Aligned_cols=222 Identities=11% Similarity=0.067 Sum_probs=116.6
Q ss_pred HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCC-CCCCCCCCCCCCCCCChhhH
Q 009560 236 RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQN-GMEHSASRDGTTDWPASDYI 314 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn-~~~~sg~~~g~~~W~~~~~~ 314 (532)
++||..+|+||.--.+.....+.+ ..+.|..+ +-+.++|++|+-.....|-+.- ..+..|. ...=...+..
T Consensus 77 ~lg~si~Rv~I~~ndfsl~g~~d~----w~kels~A-k~~in~g~ivfASPWspPa~Mktt~~~ngg---~~g~Lk~e~Y 148 (433)
T COG5520 77 QLGFSILRVPIDSNDFSLGGSADN----WYKELSTA-KSAINPGMIVFASPWSPPASMKTTNNRNGG---NAGRLKYEKY 148 (433)
T ss_pred ccCceEEEEEecccccccCCCcch----hhhhcccc-hhhcCCCcEEEecCCCCchhhhhccCcCCc---cccccchhHh
Confidence 478999999996433222222222 12222222 2377899999999888875421 1111121 1111234556
Q ss_pred HHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC-CCc--ccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhc
Q 009560 315 SQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT-VPL--DILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQA 390 (532)
Q Consensus 315 ~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~-~~~--~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~ 390 (532)
..+.+++......++++. ++.++.+-|||...+ .+. -...+...=+.+-.+.+..+.-|++.+.++. ...+.++
T Consensus 149 a~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~rF~~qyl~si~~~~rV~~pes~~~--~~~~~dp 226 (433)
T COG5520 149 ADYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELRFMRQYLASINAEMRVIIPESFKD--LPNMSDP 226 (433)
T ss_pred HHHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCCCcccccHHHHHHHHHHhhhhhccccEEecchhccc--ccccccc
Confidence 667777777777888774 788999999998742 111 1122222333444455555666776544321 1122111
Q ss_pred ----cC-CCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhc--CCCcEEEeccCcc-cCCCCCCHHHHH
Q 009560 391 ----NI-GLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNA--NGPLVFIGEWVNE-WNVTSGTQKDYQ 462 (532)
Q Consensus 391 ----~~-~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~--~g~pv~vGEwG~~-~~~~~a~~~~~~ 462 (532)
|. -..-.++..|.|..=.. ++. ..+.+. .++.++++|-... ++..+++++...
T Consensus 227 ~lnDp~a~a~~~ilg~H~Ygg~v~-----------~~p--------~~lak~~~~gKdlwmte~y~~esd~~s~dr~~~~ 287 (433)
T COG5520 227 ILNDPKALANMDILGTHLYGGQVS-----------DQP--------YPLAKQKPAGKDLWMTECYPPESDPNSADREALH 287 (433)
T ss_pred cccCHhHhcccceeEeeecccccc-----------cch--------hhHhhCCCcCCceEEeecccCCCCCCcchHHHHH
Confidence 11 12235899999975111 111 111222 2677999997554 333244444444
Q ss_pred HHHHHHHHHHHhCCCcEEEEcccC
Q 009560 463 DFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 463 ~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.+........+...-|..+|.+.-
T Consensus 288 ~~~hi~~gm~~gg~~ayv~W~i~~ 311 (433)
T COG5520 288 VALHIHIGMTEGGFQAYVWWNIRL 311 (433)
T ss_pred HHHHHHhhccccCccEEEEEEEee
Confidence 444444344454556888887664
|
|
| >PF07468 Agglutinin: Agglutinin; InterPro: IPR008998 Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.023 Score=51.85 Aligned_cols=110 Identities=12% Similarity=0.131 Sum_probs=75.5
Q ss_pred EEEecCCeEEEEecCCCc--e-eEEcCCCC-CCcceEEEEE--ecCCeEEEEe-cCCeEEEEeCCCc-eEEEeecCCCC-
Q 009560 71 IKSVTLEKYVCAESGGGT--D-VSVTRDVA-SSWETFTLWR--VSESEFQFRT-SQGQFLTCDGEGC-VVSATAKSPST- 141 (532)
Q Consensus 71 ~~s~~~~~yv~ae~gg~~--~-l~anr~~~-~~wE~f~~~~--~~~~~~~lr~-~~~~~v~~~~~g~-~~~a~~~~~~~- 141 (532)
+++-.||||+++...+.. . |-.+.+.+ .++-.|++.- ..+|.+.+|+ .+||||.....+. =+.|.++.|..
T Consensus 9 ~fkg~N~kYLry~~e~~~~~~~LqF~~edi~dP~v~fev~~~~~~dG~V~Ir~~y~nKfWrr~s~n~~WI~ada~~p~ed 88 (153)
T PF07468_consen 9 AFKGDNGKYLRYRTEDIQQYGYLQFSGEDIGDPYVKFEVEPSKTHDGLVHIRCCYNNKFWRRSSPNDYWIWADADDPDED 88 (153)
T ss_dssp EEETTTS-EEEEEESSCTTCCEEEEEESSTT-CCG-EEEEE-SSTTT-EEEEETTTTEEEEESCCC--BEEEEESSHHH-
T ss_pred EEEcCCCcEEEEEecccccceeEEecCCcCCCCceeEEEEEcccCCCeEEEEeccCCceeEeCCCCCcEEEecCCCcccc
Confidence 455699999999883222 2 66666666 5889999666 6689999999 8999999755552 48888776653
Q ss_pred ----Cce-EEEEEcC---CCcEEEEe-cCCceEEecc-----CceEEeCCCCC
Q 009560 142 ----PET-FEIERNN---DSRVHIKL-KSGTYLQATL-----GNQLTSDYPGM 180 (532)
Q Consensus 142 ----~e~-F~~v~~~---~~~v~i~a-~nG~~l~a~~-----~~~v~ad~~~~ 180 (532)
.+| |+.|+-+ ...|+++- -||.|.+--+ .++|.|.++..
T Consensus 89 ~s~~~cTLF~Pv~vd~~~~~~i~l~~~~n~~~~~r~t~~~~~~sCL~A~~~~i 141 (153)
T PF07468_consen 89 QSKPSCTLFEPVKVDVKDFNVIALRNMQNGHFCKRLTYGGKFVSCLNAASSSI 141 (153)
T ss_dssp TCSTCGG-EEEEESCCCETTEEEEEETTTTEEEEEE--STTBSSEEEEEESS-
T ss_pred cCCCCceEEEEEEecCCCccEEEEEecCCceEEEEEccCCcceeeEeeccCcc
Confidence 777 9998754 46788877 8899887432 35577776543
|
Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity [].; PDB: 1JLY_B 1JLX_B. |
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=1.3 Score=50.94 Aligned_cols=145 Identities=19% Similarity=0.292 Sum_probs=82.8
Q ss_pred HHHHHHHHHcCCCEEEE-ccc------cccccCCCC---CCCCCcChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVG------WWIAFDPDP---PAPFIGGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~------ww~~~~~~~---~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq- 293 (532)
++-+..|+++|+|+|=| ||. .|- .++.. +.+ .-+..+.|+++|+.|.++||+||||+ |..+...
T Consensus 273 ~~ll~ylk~LGvt~I~LmPi~e~~~~~~wG-Y~~~~~~a~~~-~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~ 350 (730)
T PRK12568 273 EQLIPYVQQLGFTHIELLPITEHPFGGSWG-YQPLGLYAPTA-RHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHG 350 (730)
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCC-CCCCcCCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccccc
Confidence 56689999999999987 552 121 11111 011 11468899999999999999999995 3222100
Q ss_pred -CC------CCCCCCCCC-CCCC-------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEec----------cC----CC
Q 009560 294 -NG------MEHSASRDG-TTDW-------PASDYISQTLDVIDFLASRYAKHPALLGIELL----------NE----PS 344 (532)
Q Consensus 294 -n~------~~~sg~~~g-~~~W-------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~----------NE----P~ 344 (532)
.. +.+...+.+ ...| .+++.++..++......++|.=+ .+- ++.+ ++ |.
T Consensus 351 l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhID-G~R-~DAva~mly~d~~r~~g~w~pn 428 (730)
T PRK12568 351 LAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLD-GLR-VDAVASMLYRDYGRAEGEWVPN 428 (730)
T ss_pred cccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCce-EEE-EcCHhHhhhhcccccccccccc
Confidence 00 111111111 1234 34677777777777777776421 111 2210 11 11
Q ss_pred CCCC-CcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 345 AATV-PLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 345 ~~~~-~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
..+. ....-.++.+++-++|++..|+.++|-+
T Consensus 429 ~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~IAE 461 (730)
T PRK12568 429 AHGGRENLEAVAFLRQLNREIASQFPGVLTIAE 461 (730)
T ss_pred ccCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 1110 1113457899999999999999887765
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.01 Score=61.16 Aligned_cols=169 Identities=20% Similarity=0.155 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHH-HHH---hC-CC-CcEEEE
Q 009560 264 SLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFL-ASR---YA-KH-PALLGI 337 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~l-a~r---y~-~~-p~v~g~ 337 (532)
.+++.|++.+-|++-|+++|..|-+..|.. ........--|..- |+. |. ++ -.|.+|
T Consensus 107 t~~rwd~l~~F~~~tG~~liFgLNAL~g~~-----------------~~~~~~~~g~WnssNA~~Ll~Yt~skgy~I~~W 169 (319)
T PF03662_consen 107 TMSRWDELNNFAQKTGLKLIFGLNALLGRR-----------------QLADRDWDGSWNSSNAQSLLKYTASKGYNIDSW 169 (319)
T ss_dssp -----HHHHHHHHHHT-EEEEEE-TTTS-H-----------------HHHHHHHHHHHHHH-TTTEEEEEESS-GGG---
T ss_pred chhHHHHHHHHHHHhCCEEEEEecccCCCC-----------------CCCCCCcCCCCChHHHHHHHHHHHHcCCCcccc
Confidence 467889999999999999999998865411 00111222334322 111 21 11 246689
Q ss_pred EeccCCCCCC----CCcccHHHHHHHHHHHHHhh---CCCcEEEEeCC-CCCCCc-hhhhhccCCC-CcEEEEeeecccC
Q 009560 338 ELLNEPSAAT----VPLDILVPYYKQGYQIVRKY---SPTAYVIVCQR-IGNADP-LELYQANIGL-HNIVVDLHYYNLF 407 (532)
Q Consensus 338 EL~NEP~~~~----~~~~~l~~~~~~~~~aIR~~---~~~~~Viv~~~-~~~~~~-~~~~~~~~~~-~nvv~s~H~Y~~f 407 (532)
||-|||.... ++..++.+=+.+..++|+++ ....+.|++++ ....++ .+++.. .+. .=.+++.|+|+.
T Consensus 170 ELGNEl~g~g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~-~g~~~vD~vT~H~Y~l- 247 (319)
T PF03662_consen 170 ELGNELNGSGVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKA-SGPGVVDAVTWHHYNL- 247 (319)
T ss_dssp -----HHHHSSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHH-TTTT--SEEEEEEEEE-
T ss_pred ccccccCCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHh-cCCCccCEEEEEecCC-
Confidence 9999998742 33333333333333333332 23356566543 222221 344443 222 256899999974
Q ss_pred CCcccc------CChhhhHHHHHHHHHHHHHHHHhc--CCCcEEEeccCcccCC
Q 009560 408 DTFFVN------MSTVDNILFIYKSREAQLQALNNA--NGPLVFIGEWVNEWNV 453 (532)
Q Consensus 408 ~~~~~~------~~~~~~i~~i~~~~~~~~~~~~~~--~g~pv~vGEwG~~~~~ 453 (532)
...-+. +++. ..+.+...+. .++.+.++ .+.|++|||-|.+++.
T Consensus 248 g~g~d~~l~~~~l~p~-~Ld~~~~~~~-~~~~~v~~~~p~~~~WlGEtg~Ay~g 299 (319)
T PF03662_consen 248 GSGRDPALIEDFLNPS-YLDTLADTFQ-KLQQVVQEYGPGKPVWLGETGSAYNG 299 (319)
T ss_dssp --TT-TT-HHHHTS---HHHHHHHHHH-HHH-----HHH---EEEEEEEEESTT
T ss_pred CCCchHHHHHHhcChh-hhhHHHHHHH-HHhhhhcccCCCCCeEEeCcccccCC
Confidence 221111 1111 1233332222 22222222 3568999999999863
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.15 Score=57.59 Aligned_cols=148 Identities=15% Similarity=0.163 Sum_probs=85.7
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--C
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ--N 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq--n 294 (532)
++-++.|+++|+|+|=| ||.... ..++......++ +..+.|+++|+.|.++||+||||+ |..+.+. .
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~ 239 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGLA 239 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchhh
Confidence 44459999999999999 774311 011111000011 357899999999999999999995 4433210 0
Q ss_pred C------CCCCCCCC-CCCCCC-------ChhhHHHHHHHHHHHHHHhCCCCcEEEEEec---------cCCC-----C-
Q 009560 295 G------MEHSASRD-GTTDWP-------ASDYISQTLDVIDFLASRYAKHPALLGIELL---------NEPS-----A- 345 (532)
Q Consensus 295 ~------~~~sg~~~-g~~~W~-------~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~---------NEP~-----~- 345 (532)
. +.+..... ....|. +++.++..++..+...++|.=+ .+- ++.+ .+|. .
T Consensus 240 ~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iD-G~R-~D~v~~~~~~~~~~~~~~~~~~~~ 317 (613)
T TIGR01515 240 EFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHID-GLR-VDAVASMLYLDYSRDEGEWSPNED 317 (613)
T ss_pred ccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCc-EEE-EcCHHHhhhhcccccccccccccc
Confidence 0 10100000 112233 4677888888888888887522 111 3322 1221 0
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
.+.....-..+.+.+.+.||+..|+.++|-+.
T Consensus 318 ~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~ 349 (613)
T TIGR01515 318 GGRENLEAVDFLRKLNQTVYEAFPGVVTIAEE 349 (613)
T ss_pred CCcCChHHHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 00012234678999999999999998877663
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=96.15 E-value=2.6 Score=48.63 Aligned_cols=147 Identities=16% Similarity=0.216 Sum_probs=83.2
Q ss_pred HHHHHHHHHcCCCEEEE-cccc------ccccCCCC---CCCCCcChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVGW------WIAFDPDP---PAPFIGGSLEALDNALSWAEAYNIKCIIDLH---AAPGSQ- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~w------w~~~~~~~---~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsq- 293 (532)
++-+..|+++|+|+|=| ||.- |- .++.. +.+ .-+..+.|+++|+.|.++||+||||+- ......
T Consensus 254 ~~~L~ylk~LG~t~I~LmPi~e~~~~~~wG-Y~~~~~fa~~~-~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~ 331 (758)
T PLN02447 254 DDVLPRIKALGYNAVQLMAIQEHAYYGSFG-YHVTNFFAVSS-RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLD 331 (758)
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCC-cCcccCccccc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccccccccc
Confidence 56799999999999987 4410 11 11110 011 113578899999999999999999953 221110
Q ss_pred --C-------CCCCCCCCCCCCCCC-------ChhhHHHHHHHHHHHHHHhCCC-------CcEE------EEEe---cc
Q 009560 294 --N-------GMEHSASRDGTTDWP-------ASDYISQTLDVIDFLASRYAKH-------PALL------GIEL---LN 341 (532)
Q Consensus 294 --n-------~~~~sg~~~g~~~W~-------~~~~~~~~~~~w~~la~ry~~~-------p~v~------g~EL---~N 341 (532)
+ .+.+.+...-...|. +++.++..++..+...++|+=+ .+++ +.+. .|
T Consensus 332 gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~ 411 (758)
T PLN02447 332 GLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYN 411 (758)
T ss_pred cccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcc
Confidence 1 111211111112343 3466667777777777766421 1121 0011 13
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 342 EPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 342 EP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
|-.+...+. .-..|++.+-..|++..|+.++|-++
T Consensus 412 ~~~g~~~d~-~a~~fL~~~N~~i~~~~p~~~~IAEd 446 (758)
T PLN02447 412 EYFGMATDV-DAVVYLMLANDLLHGLYPEAVTIAED 446 (758)
T ss_pred cccCCccCh-HHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 322222233 34668899999999999998877763
|
|
| >smart00791 Agglutinin Amaranthus caudatus agglutinin or amaranthin is a lectin from the ancient South American crop, amaranth grain | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.086 Score=47.10 Aligned_cols=99 Identities=14% Similarity=0.154 Sum_probs=72.0
Q ss_pred ceEEEEEecCCeEEEEecCCCce-eEEcCCCCC-CcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCC---
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTD-VSVTRDVAS-SWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPS--- 140 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~-l~anr~~~~-~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~--- 140 (532)
--|.|||- ||||+.+.+.++-+ |-...+.+. +--.|++--..++.+.+|+ ++||||.+. .. =+.|.++.|.
T Consensus 6 ~~V~FKg~-n~kYLry~~~~~~~~lqf~~ddI~dp~v~~ev~~~~dg~V~ik~~~~nKfWr~s-~~-WI~a~s~d~~e~~ 82 (139)
T smart00791 6 IYVLFKGN-NQKYLRYQSIQQYGLLQFSADKILDPLVQFEVFPTYNGLVHIKSNYTNKFWRLS-HY-WITADANDPDENK 82 (139)
T ss_pred EEEEEEcC-CCceEEEEeecccceeEecccccCCcceeEEEEEcCCCcEEEEecCCCceEccC-CC-EEEecCCCCccCC
Confidence 36899996 99999998876665 444555553 4455665557788999999 899999775 33 4777777762
Q ss_pred -CCceEEEEEcCCCcEEEEe-cCCceEEec
Q 009560 141 -TPETFEIERNNDSRVHIKL-KSGTYLQAT 168 (532)
Q Consensus 141 -~~e~F~~v~~~~~~v~i~a-~nG~~l~a~ 168 (532)
.-.-|.-++.+++.++++- -||.|+.-.
T Consensus 83 sscTLF~Pv~~d~~~i~lr~vq~~~~~~r~ 112 (139)
T smart00791 83 SACTLFRPLYVEMKKIRLLNVQLGHYTKRY 112 (139)
T ss_pred CcccEEeEEeccCceEEEEEecCCceEEee
Confidence 3346888886678999876 888888643
|
Although its biological function is unknown, it has a high binding specificity for the methyl-glycoside of the T-antigen, found linked to serine or threonine residues of cell surface glycoproteins PUBMED:2271665. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains PUBMED:9334739. |
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=95.81 E-value=1.7 Score=51.12 Aligned_cols=104 Identities=9% Similarity=0.184 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCCC---CCCCC-----------CCCCCCCCCCC-----ChhhHHHHHHHHH
Q 009560 265 LEALDNALSWAEAYNIKCIIDL---HAAPGSQ---NGMEH-----------SASRDGTTDWP-----ASDYISQTLDVID 322 (532)
Q Consensus 265 l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq---n~~~~-----------sg~~~g~~~W~-----~~~~~~~~~~~w~ 322 (532)
+..++++|+.|.++||+||||+ |..++.. ..++. .|.......+. ++..++..++.++
T Consensus 403 i~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl~ 482 (898)
T TIGR02103 403 IKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSLV 482 (898)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHHH
Confidence 6789999999999999999995 5443221 10110 01000001111 3456677778888
Q ss_pred HHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 323 FLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 323 ~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
..+++|+= ..+- |+++..- -.++++++.+++|+.+|+.+ +++.+|.
T Consensus 483 ~W~~ey~V-DGFR-fDlm~~~---------~~~f~~~~~~~l~~i~pdi~-l~GEgW~ 528 (898)
T TIGR02103 483 VWAKDYKV-DGFR-FDLMGHH---------PKAQMLAAREAIKALTPEIY-FYGEGWD 528 (898)
T ss_pred HHHHHcCC-CEEE-EechhhC---------CHHHHHHHHHHHHHhCCCEE-EEecCCC
Confidence 88888863 3333 7777543 23456778888999999754 5666664
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.13 Score=43.98 Aligned_cols=83 Identities=20% Similarity=0.323 Sum_probs=61.3
Q ss_pred cceEEEEEecCCeEEEEecCC---CceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCC----CceEEEeec
Q 009560 66 GTQVQIKSVTLEKYVCAESGG---GTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGE----GCVVSATAK 137 (532)
Q Consensus 66 g~~v~~~s~~~~~yv~ae~gg---~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~----g~~~~a~~~ 137 (532)
+....|+++..|+||.+..++ |+.|+.-.....+-+.|+|...++++|.|++ ..++.+.+.++ |..|+--..
T Consensus 14 ~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~~~~ 93 (105)
T PF14200_consen 14 DGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQWEY 93 (105)
T ss_dssp TTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEEEE-
T ss_pred CCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEEEeC
Confidence 467999999999999998874 5566664444488999999999999999999 67888888632 334444333
Q ss_pred -CCCCCceEEEE
Q 009560 138 -SPSTPETFEIE 148 (532)
Q Consensus 138 -~~~~~e~F~~v 148 (532)
.-++...|.|+
T Consensus 94 ~~~~~~Q~W~l~ 105 (105)
T PF14200_consen 94 DNGSDNQQWKLE 105 (105)
T ss_dssp STSSGGGEEEEE
T ss_pred CCCCccCEEEeC
Confidence 55667777663
|
... |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=5.1 Score=48.71 Aligned_cols=146 Identities=15% Similarity=0.180 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCCEEEE-ccc------cccccCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCC---
Q 009560 228 IEDFNFLYRHGINTVRI-PVG------WWIAFDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGS--- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~------ww~~~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs--- 292 (532)
++-++.||++|+|+|=| ||. .|- .++....... =+..+.|+++|+.|.++||+||||+ |..+..
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~swG-Y~~~~y~ap~~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~~l 847 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGGSWG-YQVTSYFAPTSRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSWAL 847 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCCCCC-CCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcchhhh
Confidence 45589999999999987 552 121 1211110001 1368999999999999999999995 322110
Q ss_pred --CC---CCCCCCCC-CCCCCCC-------ChhhHHHHHHHHHHHHHHhCCCCcEEEEEec---------c-----CCCC
Q 009560 293 --QN---GMEHSASR-DGTTDWP-------ASDYISQTLDVIDFLASRYAKHPALLGIELL---------N-----EPSA 345 (532)
Q Consensus 293 --qn---~~~~sg~~-~g~~~W~-------~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~---------N-----EP~~ 345 (532)
-+ -+.|.... .....|. +++.++..++...+..++|.=+. +- ++.. - .|+.
T Consensus 848 ~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDG-fR-~Dav~~mly~Dysr~~g~w~pn~ 925 (1224)
T PRK14705 848 AQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDG-LR-VDAVASMLYLDYSREEGQWRPNR 925 (1224)
T ss_pred hhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCc-EE-Eeehhhhhhcccccccccccccc
Confidence 00 01111111 1122343 45667777777777788775321 11 2211 0 1221
Q ss_pred CC-CCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 346 AT-VPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 346 ~~-~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
.+ -....-..+++.+...|++..|+.++|-+
T Consensus 926 ~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 926 FGGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred cCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 11 01123467899999999999998877765
|
|
| >PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.36 Score=42.71 Aligned_cols=101 Identities=19% Similarity=0.201 Sum_probs=77.3
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFE 146 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~ 146 (532)
.++|=+.+ |+||.....| .|.+-++.-+....|++...+.+.+.||+ ..++|+|.+..|- |.+. ..+..-+.|.
T Consensus 2 ~~~Ly~~~-~~~L~i~~~g--~V~gt~~~~~~~s~~~i~~~~~g~V~i~~~~s~~YLcmn~~G~-ly~~-~~~~~~C~F~ 76 (122)
T PF00167_consen 2 HVQLYCRT-GYFLQINPNG--TVDGTGDDNSPYSVFEIHSVGFGVVRIRGVKSCRYLCMNKCGR-LYGS-KNFNKDCVFR 76 (122)
T ss_dssp EEEEEETT-SEEEEEETTS--BEEEESSTTSTTGEEEEEEEETTEEEEEETTTTEEEEEBTTSB-EEEE-SSBTGGGEEE
T ss_pred CEEEEECC-CeEEEECCCC--eEeCCCCcCcceeEEEEEeccceEEEEEEecceEEEEECCCCe-Eccc-cccCCCceEE
Confidence 46777755 9999998865 67777777778889998888889999999 7899999998884 7775 5566799998
Q ss_pred EEEcCCCcEEEEec---CCceEEeccCceE
Q 009560 147 IERNNDSRVHIKLK---SGTYLQATLGNQL 173 (532)
Q Consensus 147 ~v~~~~~~v~i~a~---nG~~l~a~~~~~v 173 (532)
-....+.-..+... .+.||..+..|..
T Consensus 77 e~~~~n~y~~~~s~~~~~~~yla~~~~G~~ 106 (122)
T PF00167_consen 77 EELLENGYNTYESAKYGRGWYLAFNRRGKP 106 (122)
T ss_dssp EEEETTSEEEEEESTTGTTEBCEBCTTSBB
T ss_pred EEEccCCEEEEEeccCCccEEEEECCCCCC
Confidence 66654555555552 5888888776653
|
Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A .... |
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.036 Score=52.00 Aligned_cols=60 Identities=22% Similarity=0.337 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccc--------cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA--------FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~--------~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+|+|-|+--+... .++......++ +..+.|+++|+.|+++||+||+|+-
T Consensus 22 ~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 22 IEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred HHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455679999999999985432111 11111111111 4689999999999999999999975
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.31 Score=55.01 Aligned_cols=150 Identities=16% Similarity=0.243 Sum_probs=81.0
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCC------
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGS------ 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs------ 292 (532)
.+-++.|+++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |..+.+
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~~~~~~f~~~ 261 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTGDSHPWFDRH 261 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCCCCCHHHHHh
Confidence 46689999999999988 432100 001111111122 468999999999999999999996 322211
Q ss_pred CCC----CCCCCC---------CCC-CCCC-----------CChhhHHHHHHHHHHHHHHhCCC-CcE--EEEEeccCCC
Q 009560 293 QNG----MEHSAS---------RDG-TTDW-----------PASDYISQTLDVIDFLASRYAKH-PAL--LGIELLNEPS 344 (532)
Q Consensus 293 qn~----~~~sg~---------~~g-~~~W-----------~~~~~~~~~~~~w~~la~ry~~~-p~v--~g~EL~NEP~ 344 (532)
.++ +.++.+ ..+ ...| .+++.++.+++-+..+++++-+. -.| +=++..+|-.
T Consensus 262 ~~~~~ga~~~~~spy~dwf~~~~~~~~~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~~~giDG~RlDva~~v~ 341 (598)
T PRK10785 262 NRGTGGACHHPDSPWRDWYSFSDDGRALDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKAPYNIDGWRLDVVHMLG 341 (598)
T ss_pred hccccccccCCCCCcceeeEECCCCCcCCcCCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcCCCCCcEEEEecHhHhc
Confidence 000 000000 001 1122 24556666655444455554332 122 2366777632
Q ss_pred CCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 345 AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 345 ~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
... ....-.++.+++.+++|+..|+.+++ +..|
T Consensus 342 ~~~-~~~~~~~f~~~~~~~vk~~~pd~~li-gE~~ 374 (598)
T PRK10785 342 EGG-GARNNLQHVAGITQAAKEENPEAYVL-GEHF 374 (598)
T ss_pred ccc-CccccHHHHHHHHHHHHhhCCCeEEE-Eecc
Confidence 111 11223467788889999999987654 4333
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.09 Score=57.25 Aligned_cols=60 Identities=18% Similarity=0.484 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||.+|+.-|=++| ||-..+...|..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 130 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~p~~Y---dWsgY~~L~~mvr~~GLKlq~VmSFHqCGG 191 (573)
T PLN00197 130 KASLQALKSAGVEGIMMDV-WWGLVERESPGVY---NWGGYNELLEMAKRHGLKVQAVMSFHQCGG 191 (573)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 7889999999999999999 7777787667677 589999999999999997 6778887433
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.094 Score=56.60 Aligned_cols=59 Identities=15% Similarity=0.341 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAP 290 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~p 290 (532)
+..++.||.+|++.|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|..-
T Consensus 120 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCG 180 (531)
T PLN02161 120 TVSLKALKLAGVHGIAVEV-WWGIVERFSPLEF---KWSLYEELFRLISEAGLKLHVALCFHSNM 180 (531)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccC
Confidence 7899999999999999999 7777787667677 589999999999999997 677888743
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=95.61 E-value=1 Score=46.65 Aligned_cols=244 Identities=14% Similarity=0.200 Sum_probs=118.7
Q ss_pred HHHHHHHHHcCCCEEEEccccc---cccCCCCCCC--C--CcChHHHHHHHHHHHHHcCCEEEEEcCCCCCC----C---
Q 009560 228 IEDFNFLYRHGINTVRIPVGWW---IAFDPDPPAP--F--IGGSLEALDNALSWAEAYNIKCIIDLHAAPGS----Q--- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww---~~~~~~~~~~--~--~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGs----q--- 293 (532)
++-++.+++.|+|+|=|.|-=- ...+...+.. . .......++++++.++++|||+|-=+..+.-. .
T Consensus 16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~la~~~pe 95 (316)
T PF13200_consen 16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVLAEAHPE 95 (316)
T ss_pred HHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHHhhhChh
Confidence 6789999999999999977310 0111111100 0 11124678999999999999999754432110 0
Q ss_pred --------CCCCCCCCCCCCCCCCCh---hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCC-------------CCCCC
Q 009560 294 --------NGMEHSASRDGTTDWPAS---DYISQTLDVIDFLASRYAKHPALLGIELLNEPS-------------AATVP 349 (532)
Q Consensus 294 --------n~~~~sg~~~g~~~W~~~---~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~-------------~~~~~ 349 (532)
..|.+. ....|.+| +.++..+++.+.+|+. +...|. ||=+==|. .....
T Consensus 96 ~av~~~~G~~w~d~----~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFdEIq-fDYIRFP~~~~~~~l~y~~~~~~~~r 168 (316)
T PF13200_consen 96 WAVKTKDGSVWRDN----EGEAWVNPYSKEVWDYNIDIAKEAAKL--GFDEIQ-FDYIRFPDEGRLSGLDYSENDTEESR 168 (316)
T ss_pred hEEECCCCCcccCC----CCCccCCCCCHHHHHHHHHHHHHHHHc--CCCEEE-eeeeecCCCCcccccccCCCCCcchH
Confidence 011110 12347765 5566667777777763 111111 11111122 11012
Q ss_pred cccHHHHHHHHHHHHHhhCCCcEEEE-eC-CCCC------CCchhhhhccCCCCcEEEEeeecccC-CC---ccccCChh
Q 009560 350 LDILVPYYKQGYQIVRKYSPTAYVIV-CQ-RIGN------ADPLELYQANIGLHNIVVDLHYYNLF-DT---FFVNMSTV 417 (532)
Q Consensus 350 ~~~l~~~~~~~~~aIR~~~~~~~Viv-~~-~~~~------~~~~~~~~~~~~~~nvv~s~H~Y~~f-~~---~~~~~~~~ 417 (532)
.+.+.+|++.+.+.+++.+...-+=| +- .+.. ++...+. ..-.+++.=.|+-+ .. .+.....+
T Consensus 169 ~~aI~~Fl~~a~~~l~~~~v~vSaDVfG~~~~~~~~~~iGQ~~~~~a-----~~vD~IsPMiYPSh~~~g~~g~~~P~~~ 243 (316)
T PF13200_consen 169 VDAITDFLAYAREELHPYGVPVSADVFGYVAWSPDDMGIGQDFEKIA-----EYVDYISPMIYPSHYGPGFFGIDKPDLE 243 (316)
T ss_pred HHHHHHHHHHHHHHHhHcCCCEEEEecccccccCCCCCcCCCHHHHh-----hhCCEEEecccccccCcccCCCCCcccC
Confidence 36788999999999988875422222 21 1210 1222222 22334444444431 11 11111111
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcE---EEeccCcccCCCCCCHHHH-HHHHHHHHHHHHhCC-CcEEEEcccC
Q 009560 418 DNILFIYKSREAQLQALNNANGPLV---FIGEWVNEWNVTSGTQKDY-QDFGSAQLEVYNAAS-FGWAYWTLKN 486 (532)
Q Consensus 418 ~~i~~i~~~~~~~~~~~~~~~g~pv---~vGEwG~~~~~~~a~~~~~-~~~~~~ql~~~~~~~-~Gw~yW~~k~ 486 (532)
. -..+..........+....++++ ++--|...|-.. ....| ...+++|+.+....+ -||++|.-.+
T Consensus 244 P-Y~~v~~~~~~~~~~~~~~~~~~~~RPWlQ~Ft~~~~~~--~~~~Yg~~ev~aQI~A~~d~g~~~~llWna~n 314 (316)
T PF13200_consen 244 P-YEIVYRSLKRAKERLRGLEGPAIIRPWLQDFTASWLGK--NYKEYGPEEVRAQIQALKDAGIEGWLLWNASN 314 (316)
T ss_pred h-HHHHHHHHHHHHHHhhcCCCCCeEeccccccccccccc--CccccCHHHHHHHHHHHHHcCCCeEEEECCCC
Confidence 1 12222222222222222211222 466666665322 22334 667899997776544 5999997554
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.39 Score=53.59 Aligned_cols=134 Identities=17% Similarity=0.238 Sum_probs=76.0
Q ss_pred HHHHHHHHcCCCEEEE-cccc------ccccCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC-
Q 009560 229 EDFNFLYRHGINTVRI-PVGW------WIAFDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNG- 295 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~w------w~~~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~- 295 (532)
+.++.|+++|+|+|=| ||.- |- .++......+ =+..+.|+++|+.|.++||+||||+ |..+.+...
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~G-Y~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~ 193 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGWG-YDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEGNYLP 193 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCCC-CCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcccccc
Confidence 4589999999999998 4411 11 1111100001 1468899999999999999999995 433321100
Q ss_pred -CCCCCCCCCCCCCC------Ch---hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHH
Q 009560 296 -MEHSASRDGTTDWP------AS---DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVR 365 (532)
Q Consensus 296 -~~~sg~~~g~~~W~------~~---~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR 365 (532)
+...-.......|. ++ ..++.+++..+...++|+= ..+- +++...-.. ..-..+.+++.+++|
T Consensus 194 ~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~i-DGfR-~D~~~~~~~-----~~~~~~l~~~~~~~~ 266 (542)
T TIGR02402 194 RYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHF-DGLR-LDAVHAIAD-----TSAKHILEELAREVH 266 (542)
T ss_pred ccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCC-cEEE-EeCHHHhcc-----ccHHHHHHHHHHHHH
Confidence 00000001112232 34 5666777777777777752 2222 444433211 112467888899999
Q ss_pred hhCCC
Q 009560 366 KYSPT 370 (532)
Q Consensus 366 ~~~~~ 370 (532)
+..|+
T Consensus 267 ~~~p~ 271 (542)
T TIGR02402 267 ELAAE 271 (542)
T ss_pred HHCCC
Confidence 99988
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.38 Score=55.58 Aligned_cols=146 Identities=13% Similarity=0.195 Sum_probs=83.6
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--C
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ--N 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq--n 294 (532)
++-++.|+++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+ |..+.+. .
T Consensus 269 ~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~ 348 (726)
T PRK05402 269 DQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHGLA 348 (726)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccchh
Confidence 44468999999999987 552100 011111100111 468899999999999999999996 4432110 0
Q ss_pred C------CCCCCCCC-CCCCC-------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEec-cCC---------------C
Q 009560 295 G------MEHSASRD-GTTDW-------PASDYISQTLDVIDFLASRYAKHPALLGIELL-NEP---------------S 344 (532)
Q Consensus 295 ~------~~~sg~~~-g~~~W-------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~-NEP---------------~ 344 (532)
. +.+..... ....| .+++.++..++..+...++|+=+ .+- ++.. ++. .
T Consensus 349 ~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iD-G~R-~D~v~~~~~~~~~~~~g~~~~~~~ 426 (726)
T PRK05402 349 RFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHID-GLR-VDAVASMLYLDYSRKEGEWIPNIY 426 (726)
T ss_pred ccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCc-EEE-ECCHHHhhhccccccccccccccc
Confidence 0 11111000 11223 35677778888888888777522 111 3321 221 1
Q ss_pred CCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 345 AATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 345 ~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
... ....-..+.+.+.+.||+..|+.++|-+
T Consensus 427 ~~~-~~~~~~~fl~~~~~~~~~~~p~~~liaE 457 (726)
T PRK05402 427 GGR-ENLEAIDFLRELNAVVHEEFPGALTIAE 457 (726)
T ss_pred cCc-CCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 111 1123467889999999999999877665
|
|
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.12 Score=55.72 Aligned_cols=60 Identities=20% Similarity=0.526 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
++.++.||++|+..|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 40 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 101 (517)
T PLN02801 40 EKQLKRLKEAGVDGVMVDV-WWGIVESKGPKQY---DWSAYRSLFELVQSFGLKIQAIMSFHQCGG 101 (517)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 7889999999999999999 7777777666677 589999999999999997 5788897433
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.48 Score=53.88 Aligned_cols=146 Identities=16% Similarity=0.176 Sum_probs=82.3
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--C
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ--N 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq--n 294 (532)
++-++.|+++|+|+|=| ||.-.. ..++......+ =+..+.|+++|+.|.++||+||||+ |..+... .
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~ 253 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDGLA 253 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccccc
Confidence 44469999999999986 552100 01111110111 1468999999999999999999995 3322110 0
Q ss_pred CCC------CCCC-CCCCCCC-------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEec-cC------------CC--C
Q 009560 295 GME------HSAS-RDGTTDW-------PASDYISQTLDVIDFLASRYAKHPALLGIELL-NE------------PS--A 345 (532)
Q Consensus 295 ~~~------~sg~-~~g~~~W-------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~-NE------------P~--~ 345 (532)
.++ +... ......| .+++.++..++..+...++|.=+ .+- ++.. +. |. .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iD-G~R-~D~~~~~~~~d~~~~~~~~~~~~~ 331 (633)
T PRK12313 254 YFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLD-GLR-VDAVSNMLYLDYDEEGEWTPNKYG 331 (633)
T ss_pred ccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCc-EEE-EcChhhhhhcccccccCcCCcccC
Confidence 011 0000 0011123 35677888888888888777522 111 2211 11 11 1
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
..... .-.++.+.+.+.||+..|+.++|-+
T Consensus 332 ~~~~~-~~~~fl~~~~~~v~~~~p~~~liaE 361 (633)
T PRK12313 332 GRENL-EAIYFLQKLNEVVYLEHPDVLMIAE 361 (633)
T ss_pred CCCCc-HHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 11111 3467899999999999999776655
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.12 Score=56.21 Aligned_cols=60 Identities=18% Similarity=0.441 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||.+|++-|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 110 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 171 (548)
T PLN02803 110 NASLMALRSAGVEGVMVDA-WWGLVEKDGPMKY---NWEGYAELVQMVQKHGLKLQVVMSFHQCGG 171 (548)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 7889999999999999999 7778787766677 589999999999999997 5778887433
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.047 Score=49.59 Aligned_cols=66 Identities=23% Similarity=0.397 Sum_probs=46.1
Q ss_pred ceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEE--EEcCCCcEEEEecCCceEEeccC
Q 009560 101 ETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEI--ERNNDSRVHIKLKSGTYLQATLG 170 (532)
Q Consensus 101 E~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~--v~~~~~~v~i~a~nG~~l~a~~~ 170 (532)
|.|+ +...+.||+..++|+.||.+|..+.=.+.-......+.+ +..+.+.|+||+.-|+||.|.+.
T Consensus 2 e~F~----d~~~VRLRS~~~kYL~ADeDg~~Vs~~~~~~s~na~W~Ve~v~~~~~~v~L~saYGrYL~as~~ 69 (142)
T PF04601_consen 2 EFFP----DGKHVRLRSHHGKYLHADEDGEGVSQDRRGASLNAAWTVERVPGSPNYVRLRSAYGRYLAASDE 69 (142)
T ss_pred CccC----CCCEEEEEecCCCEEEEcCCCCeEEECCCCCCCcceEEEEEecCCCCEEEEeeccCceEeccCC
Confidence 5565 455699999999999999777634434433334444544 44435789999999999988754
|
Some family members contain two copies of the region. |
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.14 Score=56.18 Aligned_cols=60 Identities=12% Similarity=0.385 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||.+|+.-|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 271 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlqvVmSFHqCGG 332 (681)
T PLN02705 271 RQELSHMKSLNVDGVVVDC-WWGIVEGWNPQKY---VWSGYRELFNIIREFKLKLQVVMAFHEYGG 332 (681)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeEeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEeeccCC
Confidence 7889999999999999999 7777787666677 589999999999999997 6788897533
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=95.25 E-value=6.4 Score=44.58 Aligned_cols=136 Identities=15% Similarity=0.258 Sum_probs=78.0
Q ss_pred HHHHHHHHcCCCEEEE-cccc--------------ccccCCCCC---------CCCCc-ChHHHHHHHHHHHHHcCCEEE
Q 009560 229 EDFNFLYRHGINTVRI-PVGW--------------WIAFDPDPP---------APFIG-GSLEALDNALSWAEAYNIKCI 283 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~w--------------w~~~~~~~~---------~~~~~-~~l~~Ld~~v~~a~k~Gi~VI 283 (532)
+-++.|+++|+|+|=| ||.- |- .++... .|..+ +..+.|+++|+.|.++||+||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wG-Y~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vi 246 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWG-YDPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVI 246 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCC-CCCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEE
Confidence 4689999999999988 5531 11 111100 01011 136889999999999999999
Q ss_pred EEc---CCCCCCCCCCCC-----------CCCCCCCCCC------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCC
Q 009560 284 IDL---HAAPGSQNGMEH-----------SASRDGTTDW------PASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343 (532)
Q Consensus 284 LDl---H~~pGsqn~~~~-----------sg~~~g~~~W------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP 343 (532)
||+ |...+..+.++. .|.......| .++..++..++..+...++|+= ..+- ++++..-
T Consensus 247 lDvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e~~i-DGfR-~D~~~~~ 324 (605)
T TIGR02104 247 MDVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKEYNI-DGFR-FDLMGIH 324 (605)
T ss_pred EEEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHHcCC-CEEE-EechhcC
Confidence 995 443211111110 0100000111 2456677777777777777742 2333 5656332
Q ss_pred CCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 344 ~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .++.+++.++||+..|+.+++-+
T Consensus 325 -----~----~~~~~~~~~~~~~~~p~~~ligE 348 (605)
T TIGR02104 325 -----D----IETMNEIRKALNKIDPNILLYGE 348 (605)
T ss_pred -----C----HHHHHHHHHHHHhhCCCeEEEEc
Confidence 2 33567788888999997765544
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.27 Score=52.55 Aligned_cols=150 Identities=13% Similarity=0.151 Sum_probs=99.9
Q ss_pred HHHHHHHHHcCCCEEEEcccc---cc-cc---CC--C----------------------CCCCCCcC----hHHHHHHHH
Q 009560 228 IEDFNFLYRHGINTVRIPVGW---WI-AF---DP--D----------------------PPAPFIGG----SLEALDNAL 272 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w---w~-~~---~~--~----------------------~~~~~~~~----~l~~Ld~~v 272 (532)
|..|+.||=.|||.+=-|.+= |. .+ .- + =++|+.+. .+-.-+++|
T Consensus 81 eR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~LqkrIi 160 (666)
T KOG2233|consen 81 EREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLLLQKRII 160 (666)
T ss_pred HhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999988777431 11 00 00 0 01333332 344447799
Q ss_pred HHHHHcCCEEEEEcCCC--CC--------C----CCCCCCCCCCCCCCCC---CChhhHHHHHHHHHHHHHHhCCCCcEE
Q 009560 273 SWAEAYNIKCIIDLHAA--PG--------S----QNGMEHSASRDGTTDW---PASDYISQTLDVIDFLASRYAKHPALL 335 (532)
Q Consensus 273 ~~a~k~Gi~VILDlH~~--pG--------s----qn~~~~sg~~~g~~~W---~~~~~~~~~~~~w~~la~ry~~~p~v~ 335 (532)
+...+.||-+||--.+- |- + -..|++..++...... .+|-.++.-..+++++.+.|++..++.
T Consensus 161 drm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~P~dplF~eIgs~Flr~~~kefG~~tniy 240 (666)
T KOG2233|consen 161 DRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVSPFDPLFQEIGSTFLRHQIKEFGGVTNIY 240 (666)
T ss_pred HHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEccCCcchHHHHHHHHHHHHHHHhCCccccc
Confidence 99999999999964421 11 1 0012221111110011 134567777899999999999989999
Q ss_pred EEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 336 GIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 336 g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
+-|.+||-..+...++.++...++++++++++|+++.-++.+
T Consensus 241 ~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQg 282 (666)
T KOG2233|consen 241 SADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQG 282 (666)
T ss_pred ccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeeec
Confidence 999999977666677888999999999999999998766653
|
|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.74 Score=53.41 Aligned_cols=149 Identities=13% Similarity=0.163 Sum_probs=84.4
Q ss_pred HHHHHHHHHcCCCEEEE-cccc------ccccCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGW------WIAFDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNG 295 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~w------w~~~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~ 295 (532)
++-+..|+++|+|+|=| ||.- |- .++......+ -+..+.|+++|+.|.++||+||||+ |..+...++
T Consensus 420 e~~LdYLk~LGvt~IeLmPv~e~~~~~swG-Y~~~~yfa~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d~~~~ 498 (897)
T PLN02960 420 QKVLPHVKKAGYNAIQLIGVQEHKDYSSVG-YKVTNFFAVSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVG 498 (897)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCC-CCcccCCCcccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCccccc
Confidence 45699999999999987 5521 10 1111000001 1357899999999999999999995 443321111
Q ss_pred ----------CCCCCCCCCCCCCC-------ChhhHHHHHHHHHHHHHHhCCC-------CcEEEEE--eccCCC-----
Q 009560 296 ----------MEHSASRDGTTDWP-------ASDYISQTLDVIDFLASRYAKH-------PALLGIE--LLNEPS----- 344 (532)
Q Consensus 296 ----------~~~sg~~~g~~~W~-------~~~~~~~~~~~w~~la~ry~~~-------p~v~g~E--L~NEP~----- 344 (532)
+.+.+.......|. +++.++..++...+..++|.=+ .+++-.+ ...++.
T Consensus 499 L~~FDG~~~~Yf~~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~ 578 (897)
T PLN02960 499 LSLFDGSNDCYFHSGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEY 578 (897)
T ss_pred hhhcCCCccceeecCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCccccc
Confidence 11111111122343 3566777777777777776522 1222111 011111
Q ss_pred CCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 345 AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 345 ~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
........-..+++.+-.+|++..|+.++|.++
T Consensus 579 ~n~~~d~~Ai~fL~~lN~~v~~~~P~vilIAEd 611 (897)
T PLN02960 579 CNQYVDRDALIYLILANEMLHQLHPNIITIAED 611 (897)
T ss_pred CCccCCchHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 000112345668888999999999998888763
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.16 Score=56.08 Aligned_cols=60 Identities=13% Similarity=0.495 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||.+|+..|=++| ||-..+...|..| .|..+.++++.+++.||+ |||.+|..-|
T Consensus 289 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~gP~~Y---dWsgY~~L~~mvr~~GLKlqvVMSFHqCGG 350 (702)
T PLN02905 289 LKQLRILKSINVDGVKVDC-WWGIVEAHAPQEY---NWNGYKRLFQMVRELKLKLQVVMSFHECGG 350 (702)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 7889999999999999999 7778787767677 589999999999999997 6778887533
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.17 Score=54.98 Aligned_cols=153 Identities=20% Similarity=0.189 Sum_probs=98.0
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
++-.++-.++.|+|++|+ |. ++-|. -|..-+.|.+.||-|-=|+.-+- +-
T Consensus 359 ~~~LL~Sv~e~~MN~lRV----WG------GGvYE------sd~FY~lad~lGilVWQD~MFAC---------Al----- 408 (867)
T KOG2230|consen 359 TEFLLDSVAEVGMNMLRV----WG------GGVYE------SDYFYQLADSLGILVWQDMMFAC---------AL----- 408 (867)
T ss_pred HHHHHHHHHHhCcceEEE----ec------Ccccc------chhHHHHhhhccceehhhhHHHh---------hc-----
Confidence 345566678999999998 42 22332 24556789999999988876431 10
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-------------CCCcccHHHHHHHHHHH-HHhhCCCcE
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-------------TVPLDILVPYYKQGYQI-VRKYSPTAY 372 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-------------~~~~~~l~~~~~~~~~a-IR~~~~~~~ 372 (532)
.-.+++..+-..+-.++=+.|.+.+|+|+.|.--||-... ....+...-+|++.+.. ..+.++.++
T Consensus 409 YPt~~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srP 488 (867)
T KOG2230|consen 409 YPTNDEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRP 488 (867)
T ss_pred ccCcHHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCC
Confidence 0123566677777778888999999999999999996531 11234455566664444 444567888
Q ss_pred EEEeCC-CCC-CCchhhhhccCCCCcEEEEeeecccCCCc
Q 009560 373 VIVCQR-IGN-ADPLELYQANIGLHNIVVDLHYYNLFDTF 410 (532)
Q Consensus 373 Viv~~~-~~~-~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~ 410 (532)
.|++.. .|. ..+..+... .+.+|--=|+|+|+.+.+.
T Consensus 489 fi~SSPsNG~ete~e~~VS~-NP~dn~~GDVHfYdy~~d~ 527 (867)
T KOG2230|consen 489 FIVSSPSNGKETEPENYVSS-NPQDNQNGDVHFYDYTKDG 527 (867)
T ss_pred ceecCCCCCcccCccccccC-CCccccCCceEeeehhhcc
Confidence 787643 221 122333332 4556777899999986543
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.18 Score=55.95 Aligned_cols=109 Identities=11% Similarity=0.118 Sum_probs=74.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++++|+.|+|+|-..|.|- .-+|.++ .|+=...-.|.+.|+.|++.|++|+|-+- |--|--|++.| -+.
T Consensus 52 ~~~i~k~k~~Gln~IqtYVfWn-~Hep~~g-~y~FsG~~DlvkFikl~~~~GLyv~LRiG--PyIcaEw~~GG----~P~ 123 (649)
T KOG0496|consen 52 PDLIKKAKAGGLNVIQTYVFWN-LHEPSPG-KYDFSGRYDLVKFIKLIHKAGLYVILRIG--PYICAEWNFGG----LPW 123 (649)
T ss_pred HHHHHHHHhcCCceeeeeeecc-cccCCCC-cccccchhHHHHHHHHHHHCCeEEEecCC--CeEEecccCCC----cch
Confidence 7899999999999999999885 5566555 44433444566679999999999999654 22222344433 223
Q ss_pred CC-----------ChhhHHHHHHHHHHHHHHh-----CCCCcEEEEEeccCCC
Q 009560 308 WP-----------ASDYISQTLDVIDFLASRY-----AKHPALLGIELLNEPS 344 (532)
Q Consensus 308 W~-----------~~~~~~~~~~~w~~la~ry-----~~~p~v~g~EL~NEP~ 344 (532)
|. ++....++.++++.|..+. ++-.-|+..++=||=.
T Consensus 124 wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 124 WLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYG 176 (649)
T ss_pred hhhhCCceEEecCChHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhh
Confidence 32 3566777778888777642 3334577799999963
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.057 Score=54.41 Aligned_cols=56 Identities=21% Similarity=0.403 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCC--------Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF--------IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~--------~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+|+|-|+=-+- .+.....| ++ +..+.|+++|+.|+++||+||||+
T Consensus 7 ~~kLdyl~~lGv~~I~l~Pi~~---~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 7 IDKLDYLKDLGVNAIWLSPIFE---SPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HHTHHHHHHHTESEEEESS-EE---SSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCceecccccc---cccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 4558899999999999953221 11111111 11 579999999999999999999996
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.041 Score=58.13 Aligned_cols=60 Identities=17% Similarity=0.437 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC--IIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~V--ILDlH~~pG 291 (532)
+..++.||++|+..|=++| ||-..+...|..| .|..++++++.+++.||++ ||.+|+..|
T Consensus 19 ~~~L~~LK~~GV~GVmvdv-WWGiVE~~~p~~y---dWs~Y~~l~~~vr~~GLk~~~vmsfH~cGg 80 (402)
T PF01373_consen 19 EAQLRALKSAGVDGVMVDV-WWGIVEGEGPQQY---DWSGYRELFEMVRDAGLKLQVVMSFHQCGG 80 (402)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-BSS
T ss_pred HHHHHHHHHcCCcEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeeecCCC
Confidence 7899999999999999999 7777777666676 5899999999999999985 667887644
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.26 Score=43.59 Aligned_cols=65 Identities=28% Similarity=0.284 Sum_probs=55.9
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYP 178 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~ 178 (532)
++|=+.+|+|+....+|. |.++.+.......|+++..+.+.|+|+. ..++||+.+..|.|.+...
T Consensus 3 ~~Ly~~~~~~L~i~~~g~-V~gt~~~~~~~s~~~i~~~~~g~V~i~~~~s~~YLcmn~~G~ly~~~~ 68 (122)
T PF00167_consen 3 VQLYCRTGYFLQINPNGT-VDGTGDDNSPYSVFEIHSVGFGVVRIRGVKSCRYLCMNKCGRLYGSKN 68 (122)
T ss_dssp EEEEETTSEEEEEETTSB-EEEESSTTSTTGEEEEEEEETTEEEEEETTTTEEEEEBTTSBEEEESS
T ss_pred EEEEECCCeEEEECCCCe-EeCCCCcCcceeEEEEEeccceEEEEEEecceEEEEECCCCeEccccc
Confidence 455665699999999885 9999999899999999998778999998 7799999999999888643
|
Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A .... |
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=94.51 E-value=1.5 Score=48.97 Aligned_cols=59 Identities=17% Similarity=0.320 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEEcccccccc-----CCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAF-----DPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~-----~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.|+++|+|+|=|+=-+-... ++......++ +..+.++++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 31 TSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HHhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4568999999999998832111000 0111011122 468999999999999999999995
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=94.03 E-value=1.5 Score=45.37 Aligned_cols=148 Identities=15% Similarity=0.179 Sum_probs=87.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-cCCCCCCC---------CCcChHHHHHHHHHHHHHcCCEEEEEc----CCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-FDPDPPAP---------FIGGSLEALDNALSWAEAYNIKCIIDL----HAAPGS- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-~~~~~~~~---------~~~~~l~~Ld~~v~~a~k~Gi~VILDl----H~~pGs- 292 (532)
++.++.|+++|||+|=+-|..... +=++.-.| .....++-|..+|+.|+|+||.|.-=+ -..+.+
T Consensus 22 ~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~~ 101 (311)
T PF02638_consen 22 DEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVSH 101 (311)
T ss_pred HHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCCCchhh
Confidence 678899999999999887743210 00111111 111258899999999999999987433 100000
Q ss_pred ---CCC-C---CCCCCC------CCCCCCCC---hhhHHHHHHHHHHHHHHhCCCCcEEEEE-ec--------cC-----
Q 009560 293 ---QNG-M---EHSASR------DGTTDWPA---SDYISQTLDVIDFLASRYAKHPALLGIE-LL--------NE----- 342 (532)
Q Consensus 293 ---qn~-~---~~sg~~------~g~~~W~~---~~~~~~~~~~w~~la~ry~~~p~v~g~E-L~--------NE----- 342 (532)
+.. + .+.+.. .+...|.+ |+.++..+++.+.|+++|. -..|. +| .+ ++
T Consensus 102 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lDdy~yp~~~~g~~~~~~~~ 179 (311)
T PF02638_consen 102 ILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LDDYFYPPPSFGYDFPDVAA 179 (311)
T ss_pred hhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ecccccccccCCCCCccHHH
Confidence 000 0 111110 02233554 5889999999999999984 23322 22 00 01
Q ss_pred --------CCCCCC-------CcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 343 --------PSAATV-------PLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 343 --------P~~~~~-------~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
|..... -.+.+..+.++++++|+++.|+..+-+++
T Consensus 180 y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp 229 (311)
T PF02638_consen 180 YEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISP 229 (311)
T ss_pred HHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 110001 13457788999999999999998777764
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.42 Score=54.41 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=47.8
Q ss_pred cccCCHHHHHHHHHcCCCEEEE-ccccccccCCC------------------CCCCCC-----cChHHHHHHHHHHHHHc
Q 009560 223 NTFITIEDFNFLYRHGINTVRI-PVGWWIAFDPD------------------PPAPFI-----GGSLEALDNALSWAEAY 278 (532)
Q Consensus 223 ~t~ite~d~~~la~~G~N~VRI-pv~ww~~~~~~------------------~~~~~~-----~~~l~~Ld~~v~~a~k~ 278 (532)
.....+..|+.||++|+++|.| ||..+...+.. |...|. .+.+..|+.+|+.+.|+
T Consensus 198 ~gl~~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHka 277 (697)
T COG1523 198 LGLAEPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKA 277 (697)
T ss_pred ehhccccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHc
Confidence 3334456699999999999996 88654322110 001121 23588999999999999
Q ss_pred CCEEEEEc---CCCCC
Q 009560 279 NIKCIIDL---HAAPG 291 (532)
Q Consensus 279 Gi~VILDl---H~~pG 291 (532)
||.||||+ |.+.|
T Consensus 278 GI~VILDVVfNHTae~ 293 (697)
T COG1523 278 GIEVILDVVFNHTAEG 293 (697)
T ss_pred CCEEEEEEeccCcccc
Confidence 99999995 66543
|
|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=93.80 E-value=1.2 Score=50.97 Aligned_cols=58 Identities=19% Similarity=0.466 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCEEEE-cccccc--------------ccCCCC---CC-CCCc-ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI--------------AFDPDP---PA-PFIG-GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~--------------~~~~~~---~~-~~~~-~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.-++.|+++|+|+|=| ||.-.. ..++.. ++ .|-. +..+.|+++|+.|.++||+||||+
T Consensus 188 ~~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDv 265 (688)
T TIGR02100 188 AMIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDV 265 (688)
T ss_pred chhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3589999999999988 542110 011110 00 1111 357899999999999999999995
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.79 Score=39.06 Aligned_cols=69 Identities=23% Similarity=0.386 Sum_probs=53.0
Q ss_pred eEEEEEec--CCeEEEEe-cCCeEEEEeCC----CceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccC
Q 009560 102 TFTLWRVS--ESEFQFRT-SQGQFLTCDGE----GCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLG 170 (532)
Q Consensus 102 ~f~~~~~~--~~~~~lr~-~~~~~v~~~~~----g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~ 170 (532)
++++..++ ++.|.|++ ..|+++.+.++ |..++.-...-.+.+.|.|+..+++..+|+. ..|+.|.+..+
T Consensus 4 ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 4 QWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSEEEEEETSTTEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCeEEEEECCCCcEEEECCC
Confidence 45666665 88899998 78999999754 3356555555588999999999878888887 66899988753
|
... |
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=93.63 E-value=1.9 Score=51.83 Aligned_cols=103 Identities=11% Similarity=0.183 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-----CCCC----CCCCCC-----CCCCCCChhhHHHHHHHHHHHHHH
Q 009560 265 LEALDNALSWAEAYNIKCIIDL---HAAPGSQ-----NGME----HSASRD-----GTTDWPASDYISQTLDVIDFLASR 327 (532)
Q Consensus 265 l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq-----n~~~----~sg~~~-----g~~~W~~~~~~~~~~~~w~~la~r 327 (532)
.+.|+++|+.|.++||+||||+ |..+.+. .++- ..|... ....-.++..++..++.++..+++
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e 633 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE 633 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 6889999999999999999994 4332210 0000 001000 000112355677777888888888
Q ss_pred hCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 328 YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 328 y~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
|+= ..+- |+++.. .+ ..+++.+..++++.+|+.++ ++.+|
T Consensus 634 y~V-DGFR-fDl~g~-----~d----~~~~~~~~~~l~~~dP~~~l-iGE~W 673 (1111)
T TIGR02102 634 FKV-DGFR-FDMMGD-----HD----AASIEIAYKEAKAINPNIIM-IGEGW 673 (1111)
T ss_pred cCC-cEEE-Eecccc-----CC----HHHHHHHHHHHHHhCcCEEE-EEecc
Confidence 863 2333 777742 12 23556777888999997654 45444
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.60 E-value=5.1 Score=39.45 Aligned_cols=177 Identities=15% Similarity=0.214 Sum_probs=93.5
Q ss_pred ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHH---HHHHhCCCCcEEEEEe
Q 009560 263 GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDF---LASRYAKHPALLGIEL 339 (532)
Q Consensus 263 ~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~---la~ry~~~p~v~g~EL 339 (532)
.+++.+.++|..|++.||++|= |- | +|-. ..=.+++.+++|++=++. +|+++ ...+++|+
T Consensus 93 ~aleiM~KaI~LA~dLGIRtIQ-LA---G----YDVY------YE~~d~eT~~rFi~g~~~a~~lA~~a---qV~lAvEi 155 (287)
T COG3623 93 QALEIMEKAIQLAQDLGIRTIQ-LA---G----YDVY------YEEADEETRQRFIEGLKWAVELAARA---QVMLAVEI 155 (287)
T ss_pred HHHHHHHHHHHHHHHhCceeEe-ec---c----ceee------eccCCHHHHHHHHHHHHHHHHHHHhh---ccEEEeee
Confidence 4789999999999999999873 21 1 2211 111246778888766654 45555 46788999
Q ss_pred ccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCc--hhhhhccCCCCcEEEEeeecccCCC------cc
Q 009560 340 LNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADP--LELYQANIGLHNIVVDLHYYNLFDT------FF 411 (532)
Q Consensus 340 ~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~--~~~~~~~~~~~nvv~s~H~Y~~f~~------~~ 411 (532)
|.-|..+ -+.+.....+.++.--. .+=+..|+.+. .+...-..-...-+..+|.-..|.- .|
T Consensus 156 MDtpfm~---------sIsk~~~~~~~I~sP~f-~vYPDiGNlsaw~ndv~~El~lG~~~I~aiHlKDTy~vte~~~GqF 225 (287)
T COG3623 156 MDTPFMN---------SISKWLKYDKYINSPWF-TVYPDIGNLSAWNNDVQSELQLGIDKIVAIHLKDTYAVTETSPGQF 225 (287)
T ss_pred cccHHHH---------HHHHHHHHHHHhCCCcE-EecCCcccHhhhhhhHHHHHHcCcCceEEEEecccccccccCCCcc
Confidence 9888643 22344445566665333 33333333110 1221111122345678898776521 12
Q ss_pred ccCChhhhHHHHHHHHHHHHHHHHhcC-CCcEEEeccCcccCCCCCCHHHHHHHHHHHHH
Q 009560 412 VNMSTVDNILFIYKSREAQLQALNNAN-GPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLE 470 (532)
Q Consensus 412 ~~~~~~~~i~~i~~~~~~~~~~~~~~~-g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~ 470 (532)
.+.+..+ =|..+.+.+..+.+.+ ..|.+|.=|+-....+.+.....++|+..+++
T Consensus 226 rdvpfGe----G~Vdf~~~f~~lk~~ny~gpfLIEMWse~~ee~~~~i~~A~~~~~~~~~ 281 (287)
T COG3623 226 RDVPFGE----GCVDFEECFKTLKQLNYRGPFLIEMWSETAEEPVAEIIQARDWIEQRMK 281 (287)
T ss_pred ccCCcCC----cchhHHHHHHHHHHhCCCCceehhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 2221111 1223334455555543 45678877775322222233456778777665
|
|
| >smart00791 Agglutinin Amaranthus caudatus agglutinin or amaranthin is a lectin from the ancient South American crop, amaranth grain | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.68 Score=41.50 Aligned_cols=79 Identities=15% Similarity=0.168 Sum_probs=58.6
Q ss_pred eEEEEecCCeEEEEeCCCc--eEEEeecCCC-CCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCCCCCCCCCCC
Q 009560 112 EFQFRTSQGQFLTCDGEGC--VVSATAKSPS-TPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYPGMPGWDDNA 187 (532)
Q Consensus 112 ~~~lr~~~~~~v~~~~~g~--~~~a~~~~~~-~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~~~~~W~~~p 187 (532)
-++||+.|++|+.....++ -|...++-++ +.-.|+++.+.++.||||. .+|||--.. ..+++|+......=++.-
T Consensus 7 ~V~FKg~n~kYLry~~~~~~~~lqf~~ddI~dp~v~~ev~~~~dg~V~ik~~~~nKfWr~s-~~WI~a~s~d~~e~~ssc 85 (139)
T smart00791 7 YVLFKGNNQKYLRYQSIQQYGLLQFSADKILDPLVQFEVFPTYNGLVHIKSNYTNKFWRLS-HYWITADANDPDENKSAC 85 (139)
T ss_pred EEEEEcCCCceEEEEeecccceeEecccccCCcceeEEEEEcCCCcEEEEecCCCceEccC-CCEEEecCCCCccCCCcc
Confidence 4899999999998876554 5777777666 5778999998889999999 889998655 777888865432212234
Q ss_pred ccee
Q 009560 188 ATFE 191 (532)
Q Consensus 188 s~f~ 191 (532)
++|+
T Consensus 86 TLF~ 89 (139)
T smart00791 86 TLFR 89 (139)
T ss_pred cEEe
Confidence 5665
|
Although its biological function is unknown, it has a high binding specificity for the methyl-glycoside of the T-antigen, found linked to serine or threonine residues of cell surface glycoproteins PUBMED:2271665. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains PUBMED:9334739. |
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.45 Score=49.25 Aligned_cols=170 Identities=14% Similarity=0.141 Sum_probs=89.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccc----c---------------CCC------------CCCCCC----cChHHHHHHHH
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA----F---------------DPD------------PPAPFI----GGSLEALDNAL 272 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~----~---------------~~~------------~~~~~~----~~~l~~Ld~~v 272 (532)
|+.|+.||=.|+|..=-+++-... . .|. =++|+. +...+.=++++
T Consensus 22 EreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~Lq~kIl 101 (333)
T PF05089_consen 22 EREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAELQKKIL 101 (333)
T ss_dssp HHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999988766643110 0 010 012332 23455567799
Q ss_pred HHHHHcCCEEEEEcCC--CC--------CC----CCCCCCCCCCCCCCCCC---ChhhHHHHHHHHHHHHHHhCCCCcEE
Q 009560 273 SWAEAYNIKCIIDLHA--AP--------GS----QNGMEHSASRDGTTDWP---ASDYISQTLDVIDFLASRYAKHPALL 335 (532)
Q Consensus 273 ~~a~k~Gi~VILDlH~--~p--------Gs----qn~~~~sg~~~g~~~W~---~~~~~~~~~~~w~~la~ry~~~p~v~ 335 (532)
+..++.||..||--.. .| +. +..|... ....|. ++-..+....+.+...+.|+ ..++.
T Consensus 102 ~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f----~~~~~L~P~dplF~~i~~~F~~~q~~~yG-~~~~Y 176 (333)
T PF05089_consen 102 DRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGF----CRPYFLDPTDPLFAEIAKLFYEEQIKLYG-TDHIY 176 (333)
T ss_dssp HHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTE----E--EEE-SS--HHHHHHHHHHHHHHHHH----SEE
T ss_pred HHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCC----CCCceeCCCCchHHHHHHHHHHHHHHhcC-CCcee
Confidence 9999999999995331 01 10 0001000 011122 34566677788888899998 78899
Q ss_pred EEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC------CCCCCCc-hhhhhccCCCCcEEEEee
Q 009560 336 GIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ------RIGNADP-LELYQANIGLHNIVVDLH 402 (532)
Q Consensus 336 g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~------~~~~~~~-~~~~~~~~~~~nvv~s~H 402 (532)
+.|++||=..+....+.+.+..++++++++++||++.=++.+ .++..++ +.++.-.+.++=+|+|..
T Consensus 177 ~~D~FnE~~p~~~~~~~l~~~s~~v~~am~~~dp~AvWvmQgWlF~~~~fW~~~~~~a~L~~Vp~~~mliLDL~ 250 (333)
T PF05089_consen 177 AADPFNEGGPPSGDPEYLANVSKAVYKAMQAADPDAVWVMQGWLFYYDPFWTPNPIKALLSGVPKGRMLILDLF 250 (333)
T ss_dssp E--TTTTS---TTS---HHHHHHHHHHHHHHH-TT-EEEEEE--------BTTBS-HHHHTT-SGGGEEEEETT
T ss_pred CCCccCCCCCCCCchHHHHHHHHHHHHHHHhhCCCcEEEEcccccccccccCcchHHHHHcCCCCCCeEEEEcc
Confidence 999999965554456679999999999999999997655543 1222232 455554344555667654
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=93.24 E-value=1.4 Score=39.62 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCCCEEEEccc---cccccCCC--CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC---------CCC-
Q 009560 228 IEDFNFLYRHGINTVRIPVG---WWIAFDPD--PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA---------PGS- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~---ww~~~~~~--~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~---------pGs- 292 (532)
++-++.+++.|+|+|-|-.. -+.+.+.. +..|+.. .+.|.++|+.|++.||+|++-+-.. |-.
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~--~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HPeW~ 80 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLK--RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHPEWF 80 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCC--cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCCcee
Confidence 56678899999999999442 12333222 1123332 5889999999999999999843211 110
Q ss_pred ---CCCCCCCCCCCCCCCCC----ChhhHHHHHHHHHHHHHHhCCCCcEE
Q 009560 293 ---QNGMEHSASRDGTTDWP----ASDYISQTLDVIDFLASRYAKHPALL 335 (532)
Q Consensus 293 ---qn~~~~sg~~~g~~~W~----~~~~~~~~~~~w~~la~ry~~~p~v~ 335 (532)
.+|-...+.......|. +..+++...+.++.+.++| +-..++
T Consensus 81 ~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y-~~DGiF 129 (132)
T PF14871_consen 81 VRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY-DVDGIF 129 (132)
T ss_pred eECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC-CCCEEE
Confidence 01110001111222243 4567788889999999999 334443
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=92.59 E-value=3.6 Score=42.33 Aligned_cols=141 Identities=17% Similarity=0.236 Sum_probs=85.8
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccccC--CC------------CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIAFD--PD------------PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA 289 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~~~--~~------------~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~ 289 (532)
++.++.|+..++|.+-+.+. |..-.. |. +.+.| .-+.+.+++++|+++||.||..+-.
T Consensus 19 k~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~y---T~~di~elv~yA~~rgI~viPEiD~- 94 (303)
T cd02742 19 KRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFY---TYAQLKDIIEYAAARGIEVIPEIDM- 94 (303)
T ss_pred HHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeE---CHHHHHHHHHHHHHcCCEEEEeccc-
Confidence 57788899999999998875 321111 10 01122 5789999999999999999998753
Q ss_pred CCCCCCC------------CCC--CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHH
Q 009560 290 PGSQNGM------------EHS--ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVP 355 (532)
Q Consensus 290 pGsqn~~------------~~s--g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~ 355 (532)
||....+ ... ....+.....+++..+-..++++++++-|.+.--.+|-| |........+.+..
T Consensus 95 PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf~~~~iHiGgD---E~~~~~~~~~l~~~ 171 (303)
T cd02742 95 PGHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAELFPDRYLHIGGD---EAHFKQDRKHLMSQ 171 (303)
T ss_pred hHHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHhCCCCeEEecce---ecCCCCCHHHHHHH
Confidence 5521110 000 000112233456788888899999999885432233322 22111123455788
Q ss_pred HHHHHHHHHHhhCCCcEEEEe
Q 009560 356 YYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 356 ~~~~~~~aIR~~~~~~~Viv~ 376 (532)
|.+++.+.|++.+. .+++=+
T Consensus 172 f~~~~~~~v~~~g~-~~~~W~ 191 (303)
T cd02742 172 FIQRVLDIVKKKGK-KVIVWQ 191 (303)
T ss_pred HHHHHHHHHHHcCC-eEEEec
Confidence 88999999998874 344333
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=92.42 E-value=2.6 Score=49.77 Aligned_cols=106 Identities=7% Similarity=0.071 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC----CCCCC-----------CCCCCCCCCCC-----ChhhHHHHHHH
Q 009560 264 SLEALDNALSWAEAYNIKCIIDL---HAAPGSQ----NGMEH-----------SASRDGTTDWP-----ASDYISQTLDV 320 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq----n~~~~-----------sg~~~g~~~W~-----~~~~~~~~~~~ 320 (532)
....++++|+.|.++||+||||+ |...+.. +.++. .|.......+. ++..++..++.
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G~~~ns~c~n~~Ase~~mvrklIlDs 543 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDD 543 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCCCcccCCccCCCccCCHHHHHHHHHH
Confidence 36679999999999999999994 5432111 11110 01000001111 13345666788
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhh-------CCCcEEEEeCCCC
Q 009560 321 IDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKY-------SPTAYVIVCQRIG 380 (532)
Q Consensus 321 w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~-------~~~~~Viv~~~~~ 380 (532)
.+..++.|+= ...- |+|+..-. .+.+ +++..+++++ +...+++++.+|.
T Consensus 544 l~yW~~ey~V-DGFR-FDlmg~i~-----~~tm----~~~~~~L~~i~~~~~~~dg~~i~lyGEgW~ 599 (970)
T PLN02877 544 LLNWAVNYKV-DGFR-FDLMGHLM-----KRTM----VRAKDALQSLTLERDGVDGSSIYLYGEGWD 599 (970)
T ss_pred HHHHHHHhCC-CEEE-EEcccccc-----HHHH----HHHHHHHHHHhhhhcccCCCceEEEEeCCC
Confidence 8888888853 3333 78876642 2223 3334444444 4345566777773
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.32 E-value=1.4 Score=49.64 Aligned_cols=143 Identities=20% Similarity=0.266 Sum_probs=78.2
Q ss_pred CHHHHHHHHHcCCCEEEE-cccccc-----ccCCC----CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRI-PVGWWI-----AFDPD----PPAPFIGGSLEALDNALSWAEAYNIKCIIDLH---AAPGSQ 293 (532)
Q Consensus 227 te~d~~~la~~G~N~VRI-pv~ww~-----~~~~~----~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsq 293 (532)
+++-+..||++|+++|=| ||.-.. ..++. |...| +.=+.|.++|+.|.++||.||||.- ..| ..
T Consensus 167 a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~g~yAp~sry--GtPedfk~fVD~aH~~GIgViLD~V~~HF~~-d~ 243 (628)
T COG0296 167 AIELLPYLKELGITHIELMPVAEHPGDRSWGYQGTGYYAPTSRY--GTPEDFKALVDAAHQAGIGVILDWVPNHFPP-DG 243 (628)
T ss_pred HHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcceeccccccC--CCHHHHHHHHHHHHHcCCEEEEEecCCcCCC-Cc
Confidence 478889999999999997 553110 11111 11111 4678899999999999999999953 222 11
Q ss_pred CC---CCCCC------CCC-CCCCCCC-------hhhHHHHHHHHHHHHHHhC---------------CCCcEEEEEecc
Q 009560 294 NG---MEHSA------SRD-GTTDWPA-------SDYISQTLDVIDFLASRYA---------------KHPALLGIELLN 341 (532)
Q Consensus 294 n~---~~~sg------~~~-g~~~W~~-------~~~~~~~~~~w~~la~ry~---------------~~p~v~g~EL~N 341 (532)
|+ ++..- .+. -...|.+ ++.+.-+++-..+-.++|. +...--+..+.|
T Consensus 244 ~~L~~fdg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~smly~d~~~~~~~~~~n 323 (628)
T COG0296 244 NYLARFDGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVASMLYLDYSRAEGEWVPN 323 (628)
T ss_pred chhhhcCCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhhhhhccchhhhhhccccc
Confidence 11 11110 010 1234543 2223333322223333332 211112234566
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEE
Q 009560 342 EPSAATVPLDILVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 342 EP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
|..+. ..-...++.+.+-+.|+...|..+.|
T Consensus 324 ~~ggr--~n~~a~efl~~~n~~i~~~~pg~~~i 354 (628)
T COG0296 324 EYGGR--ENLEAAEFLRNLNSLIHEEEPGAMTI 354 (628)
T ss_pred ccCCc--ccHHHHHHhhhhhhhhcccCCCceee
Confidence 66442 23456788899999999988876443
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=92.21 E-value=2.5 Score=51.60 Aligned_cols=137 Identities=17% Similarity=0.287 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccc--------------cCCCC---CC-CCCcChHHHHHHHHHHHHHcCCEEEEEc--
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIA--------------FDPDP---PA-PFIGGSLEALDNALSWAEAYNIKCIIDL-- 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~--------------~~~~~---~~-~~~~~~l~~Ld~~v~~a~k~Gi~VILDl-- 286 (532)
++.++.|+++|+|+|=| ||.-..- .++.. ++ .|-....+.++++|+.|.++||+||||+
T Consensus 190 ~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDvV~ 269 (1221)
T PRK14510 190 PEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDVVF 269 (1221)
T ss_pred chhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46788999999999987 5532110 01100 00 1111267899999999999999999994
Q ss_pred -CCCCCCCCC-------CCCC-------CCCCCCC---------CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC
Q 009560 287 -HAAPGSQNG-------MEHS-------ASRDGTT---------DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342 (532)
Q Consensus 287 -H~~pGsqn~-------~~~s-------g~~~g~~---------~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE 342 (532)
|...+...+ .+.+ +...... ...++..++..++..+..++ |+ -...- ||+..+
T Consensus 270 NHt~~~~~~~p~~~~~~~d~~~yy~~~~~~~~~y~~~~G~gn~~n~~~p~v~~~i~d~lr~Wv~-~g-VDGfR-fDla~~ 346 (1221)
T PRK14510 270 NHTGESNHYGPTLSAYGSDNSPYYRLEPGNPKEYENWWGCGNLPNLERPFILRLPMDVLRSWAK-RG-VDGFR-LDLADE 346 (1221)
T ss_pred ccccCCCCCCCcccccCCCCCCceEecCCCCCcccCCCCCCCccccCCHHHHHHHHHHHHHHHH-hC-CCEEE-Eechhh
Confidence 544332110 0000 0000001 11134555555666666666 53 33333 666655
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhhCCCcEE
Q 009560 343 PSAATVPLDILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 343 P~~~~~~~~~l~~~~~~~~~aIR~~~~~~~V 373 (532)
-... + ..+.+.....++++.++.++
T Consensus 347 l~r~--~----~~f~~~~~~~l~ai~~d~~l 371 (1221)
T PRK14510 347 LARE--P----DGFIDEFRQFLKAMDQDPVL 371 (1221)
T ss_pred hccC--c----cchHHHHHHHHHHhCCCcCc
Confidence 4211 1 23556677788888887654
|
|
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=91.68 E-value=0.24 Score=47.80 Aligned_cols=71 Identities=23% Similarity=0.353 Sum_probs=56.0
Q ss_pred ccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecC
Q 009560 63 MLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKS 138 (532)
Q Consensus 63 ~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~ 138 (532)
++| ..|.||| --||||+.+..| .|++-+++++.-|+|. ..+-++.++|-+++++|..++..+-.-+|.++.
T Consensus 91 i~d-srIaLKs-GyGKYlsinsdg--lvvg~qeAvG~~EQw~-~vFq~~r~a~~as~s~~~~~~e~~d~~va~kt~ 161 (246)
T KOG3962|consen 91 ISD-SRIALKS-GYGKYLSINSDG--LVVGRQEAVGSREQWE-PVFQEGRMALLASNSCFIRCNEAGDAEVASKTA 161 (246)
T ss_pred ccC-ceEEecc-cccceeeecCCc--cEEEehhhcCcHhhch-hhhhccceEEeeccceeEEechhhchhhhcccC
Confidence 344 8999998 799999999986 8999999999999998 444477788888999999886555334444443
|
|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=1.7 Score=49.61 Aligned_cols=113 Identities=15% Similarity=0.303 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCCEEEE-cccccc--------------ccCCC----CCCCCCc---ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI--------------AFDPD----PPAPFIG---GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~--------------~~~~~----~~~~~~~---~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.-++.|+++|+|+|=| ||.-.. ..++. +...|-. ..++.|+++|+.|.++||+||||+
T Consensus 183 ~~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDv 262 (658)
T PRK03705 183 VMIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILDV 262 (658)
T ss_pred cchHHHHHcCCCEEEecCcccCCCcccccccccccccCcccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEE
Confidence 3599999999999987 552110 00110 0001111 136789999999999999999995
Q ss_pred ---CCCCCCCCCC-------CC--------CCCCC------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC
Q 009560 287 ---HAAPGSQNGM-------EH--------SASRD------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342 (532)
Q Consensus 287 ---H~~pGsqn~~-------~~--------sg~~~------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE 342 (532)
|...+...+. +. .+... ....+.++..++..++..+..+++|+= ..+- |+++.+
T Consensus 263 V~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~~~~~~g~g~~ln~~~p~Vr~~iid~l~~W~~e~gV-DGFR-fD~a~~ 340 (658)
T PRK03705 263 VFNHSAELDLDGPTLSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDWAIDCLRYWVETCHV-DGFR-FDLATV 340 (658)
T ss_pred cccCccCcCCCCcchhcccCCCccceEECCCCCcCCCCCccCcccCCCHHHHHHHHHHHHHHHHHhCC-CEEE-EEcHhh
Confidence 4433211110 00 00000 011123466777788888888888753 2333 666665
Q ss_pred C
Q 009560 343 P 343 (532)
Q Consensus 343 P 343 (532)
-
T Consensus 341 l 341 (658)
T PRK03705 341 L 341 (658)
T ss_pred h
Confidence 4
|
|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=91.28 E-value=7.1 Score=44.50 Aligned_cols=145 Identities=14% Similarity=0.199 Sum_probs=81.7
Q ss_pred HHHHHHHHHcCCCEEEE-cccc------ccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGW------WIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNG 295 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~w------w~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~ 295 (532)
++-++.|+++|+|+|=| ||.- |- .++.......+ +..+.|+++|+.|.++||+||||+ |..+. .++
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~~wG-Y~~~~~~~~~~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~-~~~ 248 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDGSWG-YQVTGYYAPTSRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTD-ESG 248 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCCCCC-cCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecccccCcc-hhh
Confidence 44568899999999987 5421 11 11110000011 368999999999999999999995 43221 111
Q ss_pred ---CC------CCCCCCC-CCCCC-------ChhhHHHHHHHHHHHHHHhCCCCcEEEEEecc------------CCCCC
Q 009560 296 ---ME------HSASRDG-TTDWP-------ASDYISQTLDVIDFLASRYAKHPALLGIELLN------------EPSAA 346 (532)
Q Consensus 296 ---~~------~sg~~~g-~~~W~-------~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~N------------EP~~~ 346 (532)
++ +.....+ ...|. +++.++..++..+...++|.=+. +- ++..- .|...
T Consensus 249 l~~~dg~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG-~R-~Dav~~~ly~d~~~~~~~~~~~ 326 (639)
T PRK14706 249 LAHFDGGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDG-LR-VDAVASMLYLDFSRTEWVPNIH 326 (639)
T ss_pred hhccCCCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCe-EE-EeeehheeecccCccccccccc
Confidence 11 0000011 12343 46777777788888887764221 11 11110 11110
Q ss_pred -CCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 347 -TVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 347 -~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+.....-..+++.+-.+||+..|+.++|-+
T Consensus 327 gg~~n~~a~~fl~~ln~~v~~~~p~~~~iAE 357 (639)
T PRK14706 327 GGRENLEAIAFLKRLNEVTHHMAPGCMMIAE 357 (639)
T ss_pred CCcccHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 111233567889999999999998877765
|
|
| >cd00058 FGF Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin | Back alignment and domain information |
|---|
Probab=91.16 E-value=7 Score=34.73 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=67.0
Q ss_pred CeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcE
Q 009560 77 EKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRV 155 (532)
Q Consensus 77 ~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v 155 (532)
|.|+-....| .|..-++.-+..-.|++..++.+.|.+|+ ..++|+|.+..|- |-+.. .+..-+.|.-....++-.
T Consensus 8 ~~~L~I~~dG--~V~Gt~~~~~~~s~l~~~s~~~g~v~i~~v~s~~YLCmn~~G~-ly~s~-~~~~dC~F~E~~~~n~Y~ 83 (123)
T cd00058 8 GFHLQILPDG--TVDGTRDDSSSYTILERIAVAVGVVSIKGVASCRYLCMNKCGK-LYGSK-GFTEECLFREELLENNYN 83 (123)
T ss_pred CeEEEEcCCC--cEecccCCCCCCceEEEEECCCCEEEEEEcccceEEEECCCCC-EEECC-CCCCCCEEEEEEccCCcE
Confidence 7788777654 56666666667788888888899999999 7999999998884 77766 889999997554433444
Q ss_pred EEEe-c--CCceEEeccCce
Q 009560 156 HIKL-K--SGTYLQATLGNQ 172 (532)
Q Consensus 156 ~i~a-~--nG~~l~a~~~~~ 172 (532)
.+.. . .+.||..+..|.
T Consensus 84 ~y~S~~~~~~~ylal~~~G~ 103 (123)
T cd00058 84 TYASAKYRRRWYLALNKKGR 103 (123)
T ss_pred EEEEcccCCCcEEEECCCCC
Confidence 4433 2 478887766554
|
The family plays essential roles in patterning and differentiation during vertebrate embryogenesis, and has neurotrophic activities. FGFs have a high affinity for heparan sulfate proteoglycans and require heparan sulfate to activate one of four cell surface FGF receptors. Upon binding to FGF, the receptors dimerize and their intracellular tyrosine kinase domains become active. FGFs have internal pseudo-threefold symmetry (beta-trefoil topology). |
| >PF07468 Agglutinin: Agglutinin; InterPro: IPR008998 Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types | Back alignment and domain information |
|---|
Probab=91.08 E-value=1.5 Score=40.22 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=48.6
Q ss_pred EEEEecCCeEEEEeC--CCc--eEEEeecCCC-CCceEEEEE--cCCCcEEEEe-cCCceEEeccCc--eEEeCCC
Q 009560 113 FQFRTSQGQFLTCDG--EGC--VVSATAKSPS-TPETFEIER--NNDSRVHIKL-KSGTYLQATLGN--QLTSDYP 178 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~--~g~--~~~a~~~~~~-~~e~F~~v~--~~~~~v~i~a-~nG~~l~a~~~~--~v~ad~~ 178 (532)
+.|+..|++|+++.. ... -|...++-++ +.-.|+++. ..++.||||. .+|||--..+++ ++.|+..
T Consensus 8 V~fkg~N~kYLry~~e~~~~~~~LqF~~edi~dP~v~fev~~~~~~dG~V~Ir~~y~nKfWrr~s~n~~WI~ada~ 83 (153)
T PF07468_consen 8 VAFKGDNGKYLRYRTEDIQQYGYLQFSGEDIGDPYVKFEVEPSKTHDGLVHIRCCYNNKFWRRSSPNDYWIWADAD 83 (153)
T ss_dssp EEEETTTS-EEEEEESSCTTCCEEEEEESSTT-CCG-EEEEE-SSTTT-EEEEETTTTEEEEESCCC--BEEEEES
T ss_pred EEEEcCCCcEEEEEecccccceeEEecCCcCCCCceeEEEEEcccCCCeEEEEeccCCceeEeCCCCCcEEEecCC
Confidence 577779999999976 332 4777766665 689999999 5588999999 899999876666 7777743
|
Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity [].; PDB: 1JLY_B 1JLX_B. |
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=91.02 E-value=0.79 Score=49.55 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccc----cCCCCCCCCCc---ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA----FDPDPPAPFIG---GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~----~~~~~~~~~~~---~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.+..|+++|+++|=||=.+... .++......++ +..+.|+++|+.|+++||+||+|.
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 577899999999999997533211 01111011121 467899999999999999999995
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.63 Score=51.92 Aligned_cols=59 Identities=19% Similarity=0.311 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCC-----CCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPP-----APFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~-----~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|.=-+.......+. ...++ +..+.|+++|+.|+++||+||||+
T Consensus 30 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 30 IEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 466899999999999884322111000010 01112 478999999999999999999995
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=90.95 E-value=5.4 Score=41.46 Aligned_cols=144 Identities=12% Similarity=0.133 Sum_probs=86.6
Q ss_pred HHHHHHHHHcCCCEEEEcccc-ccccCCCCCC--------------------CCC-cC--hHHHHHHHHHHHHHcCCEEE
Q 009560 228 IEDFNFLYRHGINTVRIPVGW-WIAFDPDPPA--------------------PFI-GG--SLEALDNALSWAEAYNIKCI 283 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w-w~~~~~~~~~--------------------~~~-~~--~l~~Ld~~v~~a~k~Gi~VI 283 (532)
++-++.|+..++|.+-+.+.= |.+.-...+. ... .+ ..+.++++++.|+++||.||
T Consensus 20 k~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~vI 99 (326)
T cd06564 20 KDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELIAYAKDRGVNII 99 (326)
T ss_pred HHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHHHHHHHcCCeEe
Confidence 677888999999999886631 1111000000 000 11 57899999999999999999
Q ss_pred EEcCCCCCCCCCCC-----------CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCC-CCc-EEEE-EeccCCCCCCCC
Q 009560 284 IDLHAAPGSQNGME-----------HSASRDGTTDWPASDYISQTLDVIDFLASRYAK-HPA-LLGI-ELLNEPSAATVP 349 (532)
Q Consensus 284 LDlH~~pGsqn~~~-----------~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~-~p~-v~g~-EL~NEP~~~~~~ 349 (532)
..+- .||....+- ......+.....+++..+-..++++++++-|.. .+. .+|- |..+. ...
T Consensus 100 PEID-~PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~~HiGgDE~~~~----~~~ 174 (326)
T cd06564 100 PEID-SPGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDTVHIGADEYAGD----AGY 174 (326)
T ss_pred ccCC-CcHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCEEEecccccccc----Ccc
Confidence 8775 355321100 001111222344677888888999999998873 232 2222 22222 224
Q ss_pred cccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 350 LDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 350 ~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
.+.+..|.+++.+.|++.+. ++++-++
T Consensus 175 ~~~~~~f~~~~~~~v~~~gk-~~~~W~d 201 (326)
T cd06564 175 AEAFRAYVNDLAKYVKDKGK-TPRVWGD 201 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEeCC
Confidence 56788999999999999864 3444343
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.31 E-value=19 Score=38.07 Aligned_cols=234 Identities=18% Similarity=0.227 Sum_probs=117.0
Q ss_pred HcCCCEEEEccccccccCC-----CCCCCCC-------cChHHHHHHHHHHHHH---cCCEEEEEcCCCCCCCCCCCCCC
Q 009560 236 RHGINTVRIPVGWWIAFDP-----DPPAPFI-------GGSLEALDNALSWAEA---YNIKCIIDLHAAPGSQNGMEHSA 300 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~~~-----~~~~~~~-------~~~l~~Ld~~v~~a~k---~Gi~VILDlH~~pGsqn~~~~sg 300 (532)
-+|.|..|+|+.--.+... +.++.|. ++.++.---.|+.|.+ .+|+..-....+||.- ...|
T Consensus 135 Gl~y~~gRVPiAS~DFS~r~YsYdDv~~Df~l~nF~L~~ED~q~KIP~ik~A~~~~~~~lklfAsPWsaPgWl---Kttg 211 (518)
T KOG2566|consen 135 GLGYNIGRVPIASCDFSTREYSYDDVPDDFQLKNFSLPEEDLKLKIPFIKKAQKYNQGNLKLFASPWSAPGWL---KTTG 211 (518)
T ss_pred CccceeeeeeecccccccceeeccCCcccccccccCCchhhheeecHHHHHHHHhcCCCceEEecCCCCCcee---eecc
Confidence 3678899999954222111 1111111 1222222224444444 4577777777777632 1112
Q ss_pred CCCCCCCCC---ChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC----------CCcccHHHHHHHHHH-HHH
Q 009560 301 SRDGTTDWP---ASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT----------VPLDILVPYYKQGYQ-IVR 365 (532)
Q Consensus 301 ~~~g~~~W~---~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~----------~~~~~l~~~~~~~~~-aIR 365 (532)
...|...-. .+.+-+.++++.-.+.+.|..+. ..+|...-|||..+. .+.+.-+.|+++-+. ++.
T Consensus 212 ~m~G~G~l~g~~~d~yhqtya~YfvkFleaY~~~gi~FWglt~qNEPstG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa 291 (518)
T KOG2566|consen 212 RMNGKGALLGDPGDIYHQTYARYFVKFLEAYAKHGIQFWGLTTQNEPSTGSDKKWKWQTLGFTAETQRDFIKKDLGPALA 291 (518)
T ss_pred cccccccccCCCCchhHHHHHHHHHHHHHHHHhcCceEEeecccCCCCcCcccCCceeecccCHHHHHHHHHHhcchhhh
Confidence 111211111 23566777777777888887664 678888999998641 245566667666443 333
Q ss_pred hh--CCC-cEEEEeCCCCCCCchhhhhc----cCC-CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhc
Q 009560 366 KY--SPT-AYVIVCQRIGNADPLELYQA----NIG-LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNA 437 (532)
Q Consensus 366 ~~--~~~-~~Viv~~~~~~~~~~~~~~~----~~~-~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 437 (532)
+. ..+ +++|+.+.-++ ...|.+. +.. .----+.+|.|..|... ..+.+ . ..+
T Consensus 292 ~s~~~knvkllilDD~Rg~--LP~WadtvlnDpeAakYv~GIaVHwY~df~~p------a~~L~-----------e-Th~ 351 (518)
T KOG2566|consen 292 SSKTTKNVKLLILDDQRGL--LPHWADTVLNDPEAAKYVHGIAVHWYQDFLEP------AKHLD-----------E-THR 351 (518)
T ss_pred cCCcCCceEEEEecCCccC--CCccchhhccChhhhhhccceEEEeeccccCh------hhhhh-----------h-HHh
Confidence 32 233 34444543221 1112111 111 11123889999875321 11111 0 111
Q ss_pred CCCc--EEEeccCcccCC----CCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC---CCCCc
Q 009560 438 NGPL--VFIGEWVNEWNV----TSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND---RKHWD 492 (532)
Q Consensus 438 ~g~p--v~vGEwG~~~~~----~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e---~~~Ws 492 (532)
+.|- ++-.|=.+.+.. .-.+-+...+|..+.++-+.-.--||.=|.+--+ +..|-
T Consensus 352 ~hP~~fifgTEAc~Gy~~~d~v~~Gswdrae~yasdii~dlnn~vtGWtdwNl~Ld~~GGP~wv 415 (518)
T KOG2566|consen 352 KHPNTFIFGTEACAGYKSKDGVDLGSWDRAEQYASDIITDLNNHVTGWTDWNLILDAQGGPNWV 415 (518)
T ss_pred hCCCeEEEeehhccccccccCccccchhhHHHHHHHHHHhhhhhccceeeeeeEecCcCCchhH
Confidence 1222 334454433321 1122334567888888877777789999977654 45554
|
|
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=90.05 E-value=7.4 Score=40.00 Aligned_cols=144 Identities=13% Similarity=0.096 Sum_probs=86.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-cCCCC-----CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC----C
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-FDPDP-----PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGM----E 297 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-~~~~~-----~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~----~ 297 (532)
++-++.|+..|+|.+-+.+.= .+ .+..| .+.| .-+.+.++++.|+++||.||..+-. ||....+ .
T Consensus 20 k~~id~ma~~k~N~l~lhl~D-~f~~~~~p~~~~~~~~y---T~~ei~ei~~yA~~~gI~vIPeid~-pGH~~~~l~~~~ 94 (301)
T cd06565 20 KKLLRLLALLGANGLLLYYED-TFPYEGEPEVGRMRGAY---TKEEIREIDDYAAELGIEVIPLIQT-LGHLEFILKHPE 94 (301)
T ss_pred HHHHHHHHHcCCCEEEEEEec-ceecCCCcccccCCCCc---CHHHHHHHHHHHHHcCCEEEecCCC-HHHHHHHHhCcc
Confidence 677889999999999886631 11 11111 1122 6789999999999999999998654 5521110 0
Q ss_pred CCCCC-----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC-CCCC-------CCCcccHHHHHHHHHHHH
Q 009560 298 HSASR-----DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE-PSAA-------TVPLDILVPYYKQGYQIV 364 (532)
Q Consensus 298 ~sg~~-----~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE-P~~~-------~~~~~~l~~~~~~~~~aI 364 (532)
....+ .+...-.+++..+-..++++++++-|...--.+|-|=..+ ..+. ....+.+..+.+++.+.|
T Consensus 95 ~~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s~~~HIG~DE~~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~v 174 (301)
T cd06565 95 FRHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPSKYIHIGMDEAYDLGRGRSLRKHGNLGRGELYLEHLKKVLKII 174 (301)
T ss_pred cccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEECCCcccccCCCHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 1122233567788888899999988874222233221111 1110 012345788999999999
Q ss_pred HhhCCCcEEEEeC
Q 009560 365 RKYSPTAYVIVCQ 377 (532)
Q Consensus 365 R~~~~~~~Viv~~ 377 (532)
++.++ ++++-++
T Consensus 175 ~~~g~-~~~~W~D 186 (301)
T cd06565 175 KKRGP-KPMMWDD 186 (301)
T ss_pred HHcCC-EEEEEhH
Confidence 99987 4555444
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=90.02 E-value=0.92 Score=48.60 Aligned_cols=58 Identities=21% Similarity=0.284 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++.++.|+++|+++|=||=..-. ..+....+. ++ +..+.|+++|+.|+++||+||+|+
T Consensus 32 ~~kl~~l~~lG~t~iwl~P~~~~-~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 32 EGKVPDLAKSGFTSAWLPPPSQS-LAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHcCCCEEEeCCCCcC-CCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 57788999999999999654321 111111111 11 468899999999999999999996
|
|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=89.79 E-value=0.92 Score=50.71 Aligned_cols=60 Identities=17% Similarity=0.366 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-----cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-----FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-----~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+++|=|+=-+..- .++......++ +..+.|+++|+.|+++||+||||+-
T Consensus 36 ~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 36 TQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred HHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 467899999999999883222100 00100001112 4689999999999999999999963
|
|
| >smart00442 FGF Acidic and basic fibroblast growth factor family | Back alignment and domain information |
|---|
Probab=89.60 E-value=15 Score=32.82 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=68.1
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETF 145 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F 145 (532)
.+++|=+ .+|.||-....| .+-.-++.-+..-.|++.-++.+.|.+|+ ..++|+|.+..|- |-+... +..-+.|
T Consensus 3 R~~~Ly~-~~~~~L~I~~~G--~V~Gt~~~~~~~~ile~~s~~~g~V~ik~~~s~~YLCmn~~G~-ly~s~~-~~~dC~F 77 (126)
T smart00442 3 RLRQLYC-RNGQHLQILPDG--TVDGTRDESSSFTILEIIAVAVGVVAIKGVASCRYLCMNKCGK-LYGSKN-FTEDCVF 77 (126)
T ss_pred eEEEEEe-CCCeEEEEcCCc--eEecccCCCCcceEEEEEeccCCEEEEEEcccceEEEECCCCC-EEEccc-CCCCcEE
Confidence 4566665 456888887554 55566666666777887778889999999 7899999999884 766665 7899999
Q ss_pred EEEEcCCCcEEE-EecCC--ceEEeccCce
Q 009560 146 EIERNNDSRVHI-KLKSG--TYLQATLGNQ 172 (532)
Q Consensus 146 ~~v~~~~~~v~i-~a~nG--~~l~a~~~~~ 172 (532)
.=....++-..+ ...+. .||..+..|.
T Consensus 78 ~E~~~~n~y~~y~S~~~~~~~ylal~~~G~ 107 (126)
T smart00442 78 REEMEENGYNTYASAKYRKRWYVALNKKGR 107 (126)
T ss_pred EEEeccCCeEEEEEcccCCceEEEECCCCC
Confidence 644332233323 33333 6776665554
|
Mitogens that stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family play essential roles in patterning and differentiation during vertebrate embryogenesis, and have neurotrophic activities. |
| >PRK05904 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.16 E-value=3.4 Score=43.55 Aligned_cols=126 Identities=13% Similarity=0.078 Sum_probs=75.8
Q ss_pred ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLH-AAPGSQNGMEHSA 300 (532)
Q Consensus 224 t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH-~~pGsqn~~~~sg 300 (532)
..++++.++.|++.|+|.|=|+| ..+.+.. -..+ .....+.+.++++.++++|+. |-+|+- +.||
T Consensus 99 ~~lt~e~l~~lk~~G~nrisiGv--QS~~d~v-L~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dlI~GlPg--------- 166 (353)
T PRK05904 99 ELITQSQINLLKKNKVNRISLGV--QSMNNNI-LKQLNRTHTIQDSKEAINLLHKNGIYNISCDFLYCLPI--------- 166 (353)
T ss_pred CcCCHHHHHHHHHcCCCEEEEec--ccCCHHH-HHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeecCCC---------
Confidence 45689999999999999666655 2221110 0000 123567888999999999997 888865 3343
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC------CCCcccHHHHHHHHHHHHHhhCCCcEEE
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA------TVPLDILVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~------~~~~~~l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
...+.+.+.++.+.+ .+ -+.+..+.+.=||..+ ..+.+.-.+.++.+.+.+++.+-.++=+
T Consensus 167 -----------qt~e~~~~tl~~~~~-l~-p~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~yei 233 (353)
T PRK05904 167 -----------LKLKDLDEVFNFILK-HK-INHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFNKLNYKRYEV 233 (353)
T ss_pred -----------CCHHHHHHHHHHHHh-cC-CCEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHHHcCCcEEec
Confidence 223334444443333 22 1234445555566521 1234456677788888898888877644
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=88.80 E-value=1.1 Score=49.29 Aligned_cols=59 Identities=24% Similarity=0.193 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCEEEEcccccc-------ccCCCCCC---------CCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWI-------AFDPDPPA---------PFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~-------~~~~~~~~---------~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.|+++|+++|=|+=.+.. ..++.... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~ 101 (479)
T PRK09441 25 AERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADV 101 (479)
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45589999999999988442211 11111111 1122 368899999999999999999995
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=88.43 E-value=5.8 Score=41.64 Aligned_cols=132 Identities=14% Similarity=0.098 Sum_probs=75.5
Q ss_pred CHHHHHHHHHcCCCEEEEccccc---cccCCCCCCCCC----cChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWW---IAFDPDPPAPFI----GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww---~~~~~~~~~~~~----~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
.++-.+.+|++|+.-|=|---.- ...+. ...+|+ +..-+.+.++++.|+|+||++-+-+|... |.+.
T Consensus 93 ~dqW~~~ak~aGakY~VlTakHHDGF~LW~S-~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~d-----w~~~ 166 (346)
T PF01120_consen 93 ADQWAKLAKDAGAKYVVLTAKHHDGFCLWPS-KYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWD-----WHHP 166 (346)
T ss_dssp HHHHHHHHHHTT-SEEEEEEE-TT--BSS---TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSS-----CCCT
T ss_pred HHHHHHHHHHcCCCEEEeehhhcCccccCCC-CCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchH-----hcCc
Confidence 36778888999999986633110 01111 112232 13568899999999999999999887631 1111
Q ss_pred CCCCCC-CCC-C---C----hhh-HHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCC
Q 009560 300 ASRDGT-TDW-P---A----SDY-ISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSP 369 (532)
Q Consensus 300 g~~~g~-~~W-~---~----~~~-~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~ 369 (532)
...... ... . . ++. .+.+.+-++.|.+|| .+.++=||...... .+.+.. ...++.||+..|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~-----~~~~~~--~~~~~~i~~~qp 237 (346)
T PF01120_consen 167 DYPPDEEGDENGPADGPGNWQRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP-----DEDWDS--AELYNWIRKLQP 237 (346)
T ss_dssp TTTSSCHCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----CTHHHH--HHHHHHHHHHST
T ss_pred ccCCCccCCcccccccchhhHhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----ccccCH--HHHHHHHHHhCC
Confidence 111000 000 0 0 112 235566777888999 56666688776641 122322 889999999999
Q ss_pred CcEE
Q 009560 370 TAYV 373 (532)
Q Consensus 370 ~~~V 373 (532)
+.+|
T Consensus 238 ~~ii 241 (346)
T PF01120_consen 238 DVII 241 (346)
T ss_dssp TSEE
T ss_pred eEEE
Confidence 7654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=87.77 E-value=1.5 Score=50.14 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-------------------cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-------------------FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-------------------~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.|+++|+|+|=|+=.+... ..+......++ +..+.|+++|+.|+++||+||||+
T Consensus 233 ~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 312 (683)
T PRK09505 233 TEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDV 312 (683)
T ss_pred HHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 455899999999999874211110 00000011122 468999999999999999999995
|
|
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=87.62 E-value=21 Score=37.20 Aligned_cols=136 Identities=19% Similarity=0.250 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccccCCCC----CCCC------CcC--hHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIAFDPDP----PAPF------IGG--SLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~~~~~~----~~~~------~~~--~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
++.++.|+..++|.+-+.+. |..-...-| .+.+ ..+ ..+.+.++++.|+++||.||..+-. ||
T Consensus 21 k~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~YT~~di~elv~yA~~rgI~vIPEiD~-PG 99 (329)
T cd06568 21 KRYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYYTQEDYKDIVAYAAERHITVVPEIDM-PG 99 (329)
T ss_pred HHHHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecCC-cH
Confidence 56788899999999988773 211111100 0000 001 5788999999999999999998753 54
Q ss_pred CCCC-------CCCCCC----------CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHH
Q 009560 292 SQNG-------MEHSAS----------RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILV 354 (532)
Q Consensus 292 sqn~-------~~~sg~----------~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~ 354 (532)
.... ....+. ..+.....+++..+-..++++.+++-|.+.--.+| .-|... ...+.+.
T Consensus 100 H~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~f~~~~iHiG---gDE~~~--~~~~~~~ 174 (329)
T cd06568 100 HTNAALAAYPELNCDGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAALTPGPYIHIG---GDEAHS--TPHDDYA 174 (329)
T ss_pred HHHHHHHhChhhccCCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHhCCCCeEEEe---cccCCC--CchHHHH
Confidence 2110 000000 00112334567777788888888887764322233 233332 2346678
Q ss_pred HHHHHHHHHHHhhCC
Q 009560 355 PYYKQGYQIVRKYSP 369 (532)
Q Consensus 355 ~~~~~~~~aIR~~~~ 369 (532)
.|.+++.+.+++.+.
T Consensus 175 ~f~~~~~~~v~~~Gk 189 (329)
T cd06568 175 YFVNRVRAIVAKYGK 189 (329)
T ss_pred HHHHHHHHHHHHCCC
Confidence 899999999998875
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=87.35 E-value=5.3 Score=42.81 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=75.7
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
-++++.++.|+++|+|.|=|.| ..+ ++..-... .....+.+.++++.+++.|+. |-+|+-. .||
T Consensus 112 ~lt~e~l~~l~~~GvnrislGv--QS~-~d~~L~~l~R~~~~~~~~~ai~~l~~~G~~~v~~dlI~GlPg---------- 178 (400)
T PRK07379 112 TFDLEQLQGYRSLGVNRVSLGV--QAF-QDELLALCGRSHRVKDIFAAVDLIHQAGIENFSLDLISGLPH---------- 178 (400)
T ss_pred cCCHHHHHHHHHCCCCEEEEEc--ccC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 3689999999999999555544 322 21100000 123567788899999999998 7788753 343
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-----------CCCcccHHHHHHHHHHHHHhhCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-----------TVPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-----------~~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
...+.+.+-++.+.+ . +-..+-.+.+.-||..+ ..+.+...+.+..+.+.+++.+-.
T Consensus 179 ----------qt~e~~~~tl~~~~~-l-~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~ 246 (400)
T PRK07379 179 ----------QTLEDWQASLEAAIA-L-NPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGYE 246 (400)
T ss_pred ----------CCHHHHHHHHHHHHc-C-CCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 122233333333332 2 22455567788888642 113455667888888999998876
Q ss_pred cE
Q 009560 371 AY 372 (532)
Q Consensus 371 ~~ 372 (532)
++
T Consensus 247 ~y 248 (400)
T PRK07379 247 HY 248 (400)
T ss_pred ee
Confidence 65
|
|
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=87.04 E-value=17 Score=38.31 Aligned_cols=148 Identities=13% Similarity=0.151 Sum_probs=83.0
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccccCCCCC----CCCC-----------------cC--hHHHHHHHHHHHHHcCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIAFDPDPP----APFI-----------------GG--SLEALDNALSWAEAYNI 280 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~~~~~~~----~~~~-----------------~~--~l~~Ld~~v~~a~k~Gi 280 (532)
++-++.|+..++|.+-+.+. |..-.+.-|. +-+. .+ ..+.+.++++.|+++||
T Consensus 21 k~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI 100 (357)
T cd06563 21 KRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGI 100 (357)
T ss_pred HHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCC
Confidence 57788899999999998772 2111110000 0000 11 58899999999999999
Q ss_pred EEEEEcCCCCCCCCC----CCC---C----------CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCC
Q 009560 281 KCIIDLHAAPGSQNG----MEH---S----------ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343 (532)
Q Consensus 281 ~VILDlH~~pGsqn~----~~~---s----------g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP 343 (532)
.||..+- .||.... +.. . +.........+++..+-..++++++++-|...--.+|-|=.+.-
T Consensus 101 ~VIPEID-~PGH~~a~l~~~pel~~~~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~lF~~~~iHiGgDE~~~~ 179 (357)
T cd06563 101 TVIPEID-MPGHALAALAAYPELGCTGGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAELFPSPYIHIGGDEVPKG 179 (357)
T ss_pred EEEEecC-CchhHHHHHHhCccccCCCCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEEeccccCCc
Confidence 9999865 3552211 000 0 00011122335677778888889998888753323343322221
Q ss_pred CCCC-------------CCc-ccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 344 SAAT-------------VPL-DILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 344 ~~~~-------------~~~-~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
.... .+. +.+..|.+++.+.|++.+. ++++-++
T Consensus 180 ~w~~~~~~~~~~~~~g~~~~~~l~~~f~~~~~~~v~~~G~-~~i~W~d 226 (357)
T cd06563 180 QWEKSPACQARMKEEGLKDEHELQSYFIKRVEKILASKGK-KMIGWDE 226 (357)
T ss_pred ccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHcCC-EEEEeec
Confidence 1100 011 2335678889999998764 3444343
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >cd00058 FGF Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin | Back alignment and domain information |
|---|
Probab=86.91 E-value=3.8 Score=36.45 Aligned_cols=59 Identities=24% Similarity=0.137 Sum_probs=50.3
Q ss_pred cCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 118 SQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 118 ~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.++.|+....+|. |.++.+.......|++.-.+.+.|+|+. ..++|||.+..|.|.+.-
T Consensus 6 ~~~~~L~I~~dG~-V~Gt~~~~~~~s~l~~~s~~~g~v~i~~v~s~~YLCmn~~G~ly~s~ 65 (123)
T cd00058 6 RTGFHLQILPDGT-VDGTRDDSSSYTILERIAVAVGVVSIKGVASCRYLCMNKCGKLYGSK 65 (123)
T ss_pred cCCeEEEEcCCCc-EecccCCCCCCceEEEEECCCCEEEEEEcccceEEEECCCCCEEECC
Confidence 3488998888885 8998888778999999988788999988 799999999999887754
|
The family plays essential roles in patterning and differentiation during vertebrate embryogenesis, and has neurotrophic activities. FGFs have a high affinity for heparan sulfate proteoglycans and require heparan sulfate to activate one of four cell surface FGF receptors. Upon binding to FGF, the receptors dimerize and their intracellular tyrosine kinase domains become active. FGFs have internal pseudo-threefold symmetry (beta-trefoil topology). |
| >COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.72 E-value=6.1 Score=41.97 Aligned_cols=226 Identities=13% Similarity=0.113 Sum_probs=113.3
Q ss_pred HHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE-cCCCCCCCCCCCCCCCCCCCCCCC----
Q 009560 235 YRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID-LHAAPGSQNGMEHSASRDGTTDWP---- 309 (532)
Q Consensus 235 a~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-lH~~pGsqn~~~~sg~~~g~~~W~---- 309 (532)
++.|+|-||-..-|-...+ .++ -.+.+.|++++....+|+-.|.+ ||- +...... ..|.
T Consensus 15 ~Ei~v~yi~~~~v~h~~~q----~~~--~~~t~~d~i~d~~~~~~~~~ie~~l~~-----~~l~~~~-----~~wq~n~~ 78 (428)
T COG3664 15 DEIQVNYIRRHGVWHVNAQ----KLF--YPFTYIDEIIDTLLDLGLDLIELFLIW-----NNLNTKE-----HQWQLNVD 78 (428)
T ss_pred hhhceeeehhcceeeeeec----ccc--CChHHHHHHHHHHHHhccHHHHHhhcc-----cchhhhh-----hhcccccC
Confidence 4667777775443310111 111 13678999999999988544433 332 1111111 0232
Q ss_pred Ch-hhHHHHHHHHHHHHHHhCCC-CcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhh
Q 009560 310 AS-DYISQTLDVIDFLASRYAKH-PALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387 (532)
Q Consensus 310 ~~-~~~~~~~~~w~~la~ry~~~-p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~ 387 (532)
.+ ...++..++++.+..||+-. ...+.|++.|||+.. .+...+.+.|..+. |+..|. |=+++.|....-..+
T Consensus 79 ~~~~~~dl~~~fl~h~~~~vg~e~v~kw~f~~~~~pn~~-ad~~eyfk~y~~~a---~~~~p~--i~vg~~w~~e~l~~~ 152 (428)
T COG3664 79 DPKSVFDLIAAFLKHVIRRVGVEFVRKWPFYSPNEPNLL-ADKQEYFKLYDATA---RQRAPS--IQVGGSWNTERLHEF 152 (428)
T ss_pred CcHhHHHHHHHHHHHHHHHhChhheeecceeecCCCCcc-cchHHHHHHHHhhh---hccCcc--eeeccccCcHHHhhh
Confidence 12 46788889999999999743 467899999999875 33334444444433 455553 334443311001222
Q ss_pred hhccCCCCcEEEEeeecccCCCccccCChhhhH----HHHH---HHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHH
Q 009560 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNI----LFIY---KSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460 (532)
Q Consensus 388 ~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i----~~i~---~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~ 460 (532)
.+ ..++=..++.|.|..-...++.+..+... +.+. +.+.+.++.. .-|.|.++.||...+.........
T Consensus 153 ~k--~~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~~~r~~~d~i~~~--~~~~pl~~~~wntlt~~~~~~n~s 228 (428)
T COG3664 153 LK--KADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLEDLRGLKDLIQHH--SLGLPLLLTNWNTLTGPREPTNGS 228 (428)
T ss_pred hh--ccCcccceeecccccccccccCCCchhhhhhhhhhhhhHHHHHHHHHHhc--cCCCcceeecccccCCCccccCce
Confidence 22 23344456667776422222222111100 1111 1112222111 125689999999876533222222
Q ss_pred H--HHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 461 Y--QDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 461 ~--~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
| ..|+..++.-....-.+..||++..
T Consensus 229 y~raa~i~~~Lr~~g~~v~a~~yW~~sd 256 (428)
T COG3664 229 YVRAAYIMRLLREAGSPVDAFGYWTNSD 256 (428)
T ss_pred eehHHHHHHHHHhcCChhhhhhhhhccc
Confidence 2 2455554443333445777888775
|
|
| >smart00442 FGF Acidic and basic fibroblast growth factor family | Back alignment and domain information |
|---|
Probab=86.69 E-value=3.8 Score=36.59 Aligned_cols=65 Identities=26% Similarity=0.171 Sum_probs=52.5
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYP 178 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~ 178 (532)
.+|=+.+|.|+....+|. +..+.+...+...|++.--+.+.|+||. ..++|||.+..|.|.+...
T Consensus 5 ~~Ly~~~~~~L~I~~~G~-V~Gt~~~~~~~~ile~~s~~~g~V~ik~~~s~~YLCmn~~G~ly~s~~ 70 (126)
T smart00442 5 RQLYCRNGQHLQILPDGT-VDGTRDESSSFTILEIIAVAVGVVAIKGVASCRYLCMNKCGKLYGSKN 70 (126)
T ss_pred EEEEeCCCeEEEEcCCce-EecccCCCCcceEEEEEeccCCEEEEEEcccceEEEECCCCCEEEccc
Confidence 344455678998887774 8888888888889998887678999988 7899999999999887643
|
Mitogens that stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family play essential roles in patterning and differentiation during vertebrate embryogenesis, and have neurotrophic activities. |
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=86.15 E-value=2.9 Score=48.62 Aligned_cols=60 Identities=17% Similarity=0.148 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccc------cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA------FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~------~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.+..|+++|+++|=|+=-+-.. .+.......++ +..+.|+++++.|+++||+||+|+-
T Consensus 19 ~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDiV 86 (825)
T TIGR02401 19 AALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDIV 86 (825)
T ss_pred HHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 577899999999999773211100 01111111122 4689999999999999999999953
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=86.04 E-value=7.9 Score=40.89 Aligned_cols=123 Identities=12% Similarity=0.104 Sum_probs=74.3
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
.+|++.++.++++|+|.|-|.| ..+ ++..-... .....+...++++.++++|+. |-+|+-. .||
T Consensus 96 ~~t~e~l~~l~~~G~~rvsiGv--qS~-~d~~L~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dli~GlPg---------- 162 (374)
T PRK05799 96 TFTEEKLKILKSMGVNRLSIGL--QAW-QNSLLKYLGRIHTFEEFLENYKLARKLGFNNINVDLMFGLPN---------- 162 (374)
T ss_pred cCCHHHHHHHHHcCCCEEEEEC--ccC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC----------
Confidence 4689999999999999555554 322 21100011 112577888899999999996 6688653 232
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-----------CCCcccHHHHHHHHHHHHHhhCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-----------TVPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-----------~~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
++.+.+.+.++.+.+ .+ -+.+-.|.+.-||..+ ..+.+...+.++.+.+.+.+.+-.
T Consensus 163 ----------qt~e~~~~~l~~~~~-l~-~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 230 (374)
T PRK05799 163 ----------QTLEDWKETLEKVVE-LN-PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLKEKGYH 230 (374)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCc
Confidence 234445555555544 22 2234456666677532 012345567778888888888766
Q ss_pred cE
Q 009560 371 AY 372 (532)
Q Consensus 371 ~~ 372 (532)
++
T Consensus 231 ~y 232 (374)
T PRK05799 231 QY 232 (374)
T ss_pred EE
Confidence 54
|
|
| >PRK05628 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=84.80 E-value=11 Score=39.82 Aligned_cols=123 Identities=19% Similarity=0.092 Sum_probs=75.4
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
.++++.++.|+++|+|.|-|+| ..+ ++..-..+ .....+.+.++++.+++.|+. |.+|+-. .||
T Consensus 105 ~i~~e~l~~l~~~G~~rvslGv--QS~-~~~~L~~l~R~~s~~~~~~a~~~l~~~g~~~v~~dli~GlPg---------- 171 (375)
T PRK05628 105 STSPEFFAALRAAGFTRVSLGM--QSA-APHVLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLIYGTPG---------- 171 (375)
T ss_pred CCCHHHHHHHHHcCCCEEEEec--ccC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeccCCC----------
Confidence 4689999999999999777766 222 21110011 113577788899999999998 8899753 343
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-----------CCCcccHHHHHHHHHHHHHhhCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-----------TVPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-----------~~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
...+.+.+.++.+.+ ++ -..+..|.+.=||..+ ..+.+...+.++.+.+.+++.+-.
T Consensus 172 ----------qt~~~~~~tl~~~~~-l~-~~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G~~ 239 (375)
T PRK05628 172 ----------ESDDDWRASLDAALE-AG-VDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFD 239 (375)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHcCCC
Confidence 223344444444433 22 1234446666677542 112344667788888888888776
Q ss_pred cE
Q 009560 371 AY 372 (532)
Q Consensus 371 ~~ 372 (532)
++
T Consensus 240 ~y 241 (375)
T PRK05628 240 WY 241 (375)
T ss_pred ee
Confidence 54
|
|
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=84.57 E-value=11 Score=39.85 Aligned_cols=123 Identities=16% Similarity=0.078 Sum_probs=76.2
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
.++++.++.++++|+|.|-|.| ..+ ++..-..+ .....+.+.++++.+++.|+. |-+||-. .||
T Consensus 100 ~~~~~~l~~l~~~G~nrislGv--QS~-~~~~L~~l~R~~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPg---------- 166 (370)
T PRK06294 100 NLSESYIRALALTGINRISIGV--QTF-DDPLLKLLGRTHSSSKAIDAVQECSEHGFSNLSIDLIYGLPT---------- 166 (370)
T ss_pred CCCHHHHHHHHHCCCCEEEEcc--ccC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 4689999999999999666655 222 21100011 112567788899999999996 8888653 232
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-----------CCCcccHHHHHHHHHHHHHhhCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-----------TVPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-----------~~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
...+.+.+-++.+.+ ++ -+.+-.|.+.=||..+ ..+.+...+.++.+.+.+++.+-.
T Consensus 167 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~ 234 (370)
T PRK06294 167 ----------QSLSDFIVDLHQAIT-LP-ITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQGFT 234 (370)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCC
Confidence 123334444444443 22 2355567788788631 013345677888888889888876
Q ss_pred cE
Q 009560 371 AY 372 (532)
Q Consensus 371 ~~ 372 (532)
++
T Consensus 235 ~y 236 (370)
T PRK06294 235 RY 236 (370)
T ss_pred ee
Confidence 65
|
|
| >PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=84.29 E-value=10 Score=41.06 Aligned_cols=123 Identities=20% Similarity=0.245 Sum_probs=73.6
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCEEE-EEcC-CCCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIKCI-IDLH-AAPGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~VI-LDlH-~~pGsqn~~~~sg~ 301 (532)
.++++.++.|+++|+|.|-|.|. .+.+.. -..+ .....+.+.++++.++++|+.+| +|+- ..||
T Consensus 138 ~lt~e~l~~l~~~G~~rvslGvQ--S~~~~~-L~~l~R~~~~~~~~~ai~~l~~~g~~~i~~dlI~GlP~---------- 204 (430)
T PRK08208 138 TTTAEKLALLAARGVNRLSIGVQ--SFHDSE-LHALHRPQKRADVHQALEWIRAAGFPILNIDLIYGIPG---------- 204 (430)
T ss_pred cCCHHHHHHHHHcCCCEEEEecc--cCCHHH-HHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 46899999999999997777662 221110 0000 12257788899999999999864 7864 3332
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-----CCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-----VPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-----~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
...+.+.+.++.+.+ .+ -+.+-.+.+.=||..+- .+.+...+.++.+.+.+.+.+-.++
T Consensus 205 ----------qt~e~~~~~l~~~~~-l~-~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~~~Gy~~y 268 (430)
T PRK08208 205 ----------QTHASWMESLDQALV-YR-PEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLLEAGYTQT 268 (430)
T ss_pred ----------CCHHHHHHHHHHHHh-CC-CCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 123334444444432 22 23455566776775420 1235566777888888888776543
|
|
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=83.80 E-value=19 Score=37.75 Aligned_cols=147 Identities=12% Similarity=0.157 Sum_probs=82.7
Q ss_pred HHHHHHHHHcCCCEEEEccc---cccccCCCCC-----CCCCcC---hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG---WWIAFDPDPP-----APFIGG---SLEALDNALSWAEAYNIKCIIDLHAAPGSQNGM 296 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~---ww~~~~~~~~-----~~~~~~---~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~ 296 (532)
++-++.|+..++|.+-+.+. -|.+.-+.-| +-|..+ ..+.+.++|+.|+++||.||..+- .||....+
T Consensus 21 k~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~~~~YT~~di~eiv~yA~~rgI~vIPEID-~PGH~~a~ 99 (348)
T cd06562 21 KRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSPSEVYTPEDVKEIVEYARLRGIRVIPEID-TPGHTGSW 99 (348)
T ss_pred HHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCCCceECHHHHHHHHHHHHHcCCEEEEecc-CchhhHHH
Confidence 57788899999999988763 1122111111 011111 688999999999999999999874 36532111
Q ss_pred C---------------C-CCC-CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC------------
Q 009560 297 E---------------H-SAS-RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT------------ 347 (532)
Q Consensus 297 ~---------------~-sg~-~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~------------ 347 (532)
- . +.. ..+...-.+++..+-..++++.+++-|...--.+|-|=.+......
T Consensus 100 ~~~~p~l~~~~~~~~~~~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~lF~~~~iHiGgDE~~~~~w~~~p~~~~~m~~~g 179 (348)
T cd06562 100 GQGYPELLTGCYAVWRKYCPEPPCGQLNPTNPKTYDFLKTLFKEVSELFPDKYFHLGGDEVNFNCWNSNPEIQKFMKKNN 179 (348)
T ss_pred HHhChhhhCCCCccccccccCCCCccccCCChhHHHHHHHHHHHHHHhcCCcceEeecCCCCCCcccCCHHHHHHHHHcC
Confidence 0 0 000 0011222356777777888888888886432233333222221110
Q ss_pred -CC-cccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 348 -VP-LDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 348 -~~-~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
.+ .+....|.+++.+.|++.+.+ +++-+
T Consensus 180 ~~~~~~l~~~f~~~~~~~l~~~Gk~-~i~W~ 209 (348)
T cd06562 180 GTDYSDLESYFIQRALDIVRSLGKT-PIVWE 209 (348)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCe-EEEee
Confidence 01 122345778889999988753 34434
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >PRK05660 HemN family oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=83.78 E-value=9.9 Score=40.37 Aligned_cols=124 Identities=19% Similarity=0.217 Sum_probs=74.0
Q ss_pred ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCEE-EEEcCC-CCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIKC-IIDLHA-APGSQNGMEHSA 300 (532)
Q Consensus 224 t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~V-ILDlH~-~pGsqn~~~~sg 300 (532)
..++++.++.|+++|+|.|=|.| ..+ ++..-... .....+...++++.+++.|+.. -+|+-. .||
T Consensus 103 ~~l~~e~l~~Lk~~Gv~risiGv--qS~-~~~~L~~l~r~~~~~~~~~ai~~~~~~G~~~v~~dli~Glpg--------- 170 (378)
T PRK05660 103 GTVEADRFVGYQRAGVNRISIGV--QSF-SEEKLKRLGRIHGPDEAKRAAKLAQGLGLRSFNLDLMHGLPD--------- 170 (378)
T ss_pred CcCCHHHHHHHHHcCCCEEEecc--CcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC---------
Confidence 34689999999999999555544 222 21100000 1236778888999999999975 488753 232
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC------C-CCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA------T-VPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~------~-~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.+.+.+.++.+.+ .+ -+.+..|.+.=||..+ . .+.+...+.++.+.+.+++.+-.++
T Consensus 171 -----------qt~~~~~~~l~~~~~-l~-p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 236 (378)
T PRK05660 171 -----------QSLEEALDDLRQAIA-LN-PPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQY 236 (378)
T ss_pred -----------CCHHHHHHHHHHHHh-cC-CCeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHHcCCcEe
Confidence 233444455554444 22 2344456666666421 0 1234456788888888888887655
|
|
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.73 E-value=4.3 Score=47.54 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccc------cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA------FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~------~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.+..|+++|+++|=++=-+-.. .+.......++ +..+.|+++++.|+++||+||+|+-
T Consensus 23 ~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDiV 90 (879)
T PRK14511 23 AELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDIV 90 (879)
T ss_pred HHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 577899999999999873321110 01111111122 4689999999999999999999964
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=83.68 E-value=3.2 Score=48.20 Aligned_cols=58 Identities=21% Similarity=0.185 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++.++.|+++|+++|=||=..-.. .+....++ ++ +..+.|+.+|+.|+++||+||+|+
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~-s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESV-SPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCC-CCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 677999999999999986543111 11111111 11 468899999999999999999995
|
|
| >TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase | Back alignment and domain information |
|---|
Probab=83.30 E-value=14 Score=38.84 Aligned_cols=123 Identities=19% Similarity=0.119 Sum_probs=72.8
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
.++++.++.|+++|+|.|-|.| ..+ ++..-..+ .....+.+.++++.+++.|+. |-+|+-. .||
T Consensus 97 ~lt~e~l~~l~~~Gv~risiGv--qS~-~~~~l~~lgR~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg---------- 163 (360)
T TIGR00539 97 LITAEWCKGLKGAGINRLSLGV--QSF-RDDKLLFLGRQHSAKNIAPAIETALKSGIENISLDLMYGLPL---------- 163 (360)
T ss_pred CCCHHHHHHHHHcCCCEEEEec--ccC-ChHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEeccCCCCC----------
Confidence 4689999999999999666655 222 22110011 123678888999999999995 6788764 232
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-------CCCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-------TVPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.+.+.+.++.+.+ ++ -+.+..+.+.=||..+ ..+.+...+.+..+.+.+++.+-.++
T Consensus 164 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 229 (360)
T TIGR00539 164 ----------QTLNSLKEELKLAKE-LP-INHLSAYALSVEPNTNFEKNAKKLPDDDSCAHFDEVVREILEGFGFKQY 229 (360)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCEEEeecceEcCCChhhhhhhcCcCHHHHHHHHHHHHHHHHHcCCcee
Confidence 233444444554443 22 1244445566566531 01234466677777777777665443
|
Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo. |
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.65 E-value=2.3 Score=48.13 Aligned_cols=59 Identities=19% Similarity=0.362 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHcCCCEEEE-ccccc-------c-----ccCCC----CCCCCCcChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 226 ITIEDFNFLYRHGINTVRI-PVGWW-------I-----AFDPD----PPAPFIGGSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 226 ite~d~~~la~~G~N~VRI-pv~ww-------~-----~~~~~----~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+||+++..||++|+|+|-| |+.-. - ++-|. +++. +.....++.+|+.|.+.||.|+||+
T Consensus 256 FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFapssrYgt~~s--~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 256 FTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAPSSRYGTPES--PCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeecccccccCCCc--ccchHHHHHHHHHHhhCCcEEehhh
Confidence 4688899999999999997 43211 0 01111 1111 2347789999999999999999995
|
|
| >PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.38 E-value=17 Score=38.39 Aligned_cols=123 Identities=19% Similarity=0.186 Sum_probs=74.1
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLH-AAPGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH-~~pGsqn~~~~sg~ 301 (532)
.++++.++.++++|+|.|=|+|. .+ ++..-..+ .....+.+.++++.++++|+. |-+|+- ..||
T Consensus 97 ~l~~e~l~~l~~~G~~rvsiGvq--S~-~~~~l~~l~r~~~~~~~~~~i~~l~~~g~~~v~~dli~GlPg---------- 163 (377)
T PRK08599 97 DLTKEKLQVLKDSGVNRISLGVQ--TF-NDELLKKIGRTHNEEDVYEAIANAKKAGFDNISIDLIYALPG---------- 163 (377)
T ss_pred CCCHHHHHHHHHcCCCEEEEecc--cC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEeeecCCCC----------
Confidence 46899999999999997766662 22 11100011 123578888999999999997 567764 3343
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC--------C---CCcccHHHHHHHHHHHHHhhCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA--------T---VPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~--------~---~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
+..+.+.+.++.+.+ ++ -+.+..+.+.-||..+ . .+.+...+.++.+.+.+++.+-.
T Consensus 164 ----------qt~~~~~~~l~~~~~-l~-~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 231 (377)
T PRK08599 164 ----------QTIEDFKESLAKALA-LD-IPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEMEAHGFH 231 (377)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 123334444444433 32 2345556677777532 0 12344566778888888888765
Q ss_pred cE
Q 009560 371 AY 372 (532)
Q Consensus 371 ~~ 372 (532)
++
T Consensus 232 ~~ 233 (377)
T PRK08599 232 QY 233 (377)
T ss_pred Ee
Confidence 44
|
|
| >PRK08446 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.08 E-value=17 Score=38.23 Aligned_cols=123 Identities=15% Similarity=-0.001 Sum_probs=72.9
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH~-~pGsqn~~~~sg~ 301 (532)
-+|++.++.++++|+|.|-|.| ..+ ++..-... .....+.+.++++.+++.|+. |-+|+-- .||
T Consensus 95 ~~~~e~l~~l~~~GvnRiSiGv--QS~-~~~~L~~lgR~~~~~~~~~ai~~lr~~g~~~v~iDli~GlPg---------- 161 (350)
T PRK08446 95 SATKAWLKGMKNLGVNRISFGV--QSF-NEDKLKFLGRIHSQKQIIKAIENAKKAGFENISIDLIYDTPL---------- 161 (350)
T ss_pred CCCHHHHHHHHHcCCCEEEEec--ccC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC----------
Confidence 4689999999999999666655 222 21110011 123578888999999999996 6688753 232
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC----CcccHHHHHHHHHHHHHhhCCCcE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV----PLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~----~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.+.+.+.++.+.+ .+ -+.+..+.|.=||..+-. ....-.+.+..+.+.+++.+-.++
T Consensus 162 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~l~~~Gy~~y 224 (350)
T PRK08446 162 ----------DNKKLLKEELKLAKE-LP-INHLSAYSLTIEENTPFFEKNHKKKDDENLAKFFIEQLEELGFKQY 224 (350)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEeccceecCCChhHHhhhcCCCHHHHHHHHHHHHHHCCCcEE
Confidence 223344444444443 22 234555667767754210 001224577788888888876654
|
|
| >PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.03 E-value=11 Score=41.21 Aligned_cols=122 Identities=14% Similarity=0.058 Sum_probs=72.4
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCCE-EEEEcC-CCCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNIK-CIIDLH-AAPGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi~-VILDlH-~~pGsqn~~~~sg~ 301 (532)
.++++.++.|+++|+|.|=|.| ..+ ++..-..+ .....+.+.++++.+++.|+. |-+|+- ..||
T Consensus 149 ~lt~e~l~~L~~~G~~rvsiGv--QS~-~~~vl~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlPg---------- 215 (453)
T PRK13347 149 TVTAEMLQALAALGFNRASFGV--QDF-DPQVQKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLPH---------- 215 (453)
T ss_pred cCCHHHHHHHHHcCCCEEEECC--CCC-CHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCCC----------
Confidence 4689999999999999666555 222 21100011 113677888999999999996 778864 3343
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
.+.+.+.+.++.+.+ ++ -..+..|.+...|... -.+.+...+.++.+.+.+.+.+-.+
T Consensus 216 ----------qt~e~~~~tl~~~~~-l~-p~~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ 283 (453)
T PRK13347 216 ----------QTVESFRETLDKVIA-LS-PDRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLLAAGYVP 283 (453)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHHHCCCEE
Confidence 234445555555544 22 1233345555555421 0123455677788888888887644
|
|
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.93 E-value=2.8 Score=43.34 Aligned_cols=136 Identities=14% Similarity=0.156 Sum_probs=75.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC--------C
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH--------S 299 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~--------s 299 (532)
.+-++.+++.||.-|=-.+. . +++..+..+.+++++++.|.+.||+||+|.-..-=.+-++.. .
T Consensus 19 ~~Yi~~~~~~Gf~~IFtsl~-----~---~~~~~~~~~~~~~ell~~Anklg~~vivDvnPsil~~l~~S~~~l~~f~e~ 90 (360)
T COG3589 19 IAYIDRMHKYGFKRIFTSLL-----I---PEEDAELYFHRFKELLKEANKLGLRVIVDVNPSILKELNISLDNLSRFQEL 90 (360)
T ss_pred HHHHHHHHHcCccceeeecc-----c---CCchHHHHHHHHHHHHHHHHhcCcEEEEEcCHHHHhhcCCChHHHHHHHHh
Confidence 46677888999997754432 1 223344689999999999999999999997621000100000 0
Q ss_pred ---CCCCCCCCCCChh-------------hHHHHHHHHHHHHHHhCCCCcEEEEEeccC-CCCCCCCcccHHHHHHHHHH
Q 009560 300 ---ASRDGTTDWPASD-------------YISQTLDVIDFLASRYAKHPALLGIELLNE-PSAATVPLDILVPYYKQGYQ 362 (532)
Q Consensus 300 ---g~~~g~~~W~~~~-------------~~~~~~~~w~~la~ry~~~p~v~g~EL~NE-P~~~~~~~~~l~~~~~~~~~ 362 (532)
|-|.. ..+...+ |.....+++..|..+-.+...+.| --|= |+.. ..-=.+++.+.-+
T Consensus 91 G~~glRlD-~gfS~eei~~ms~~~lkieLN~S~it~~l~~l~~~~an~~nl~~--cHNyYPr~y---TGLS~e~f~~kn~ 164 (360)
T COG3589 91 GVDGLRLD-YGFSGEEIAEMSKNPLKIELNASTITELLDSLLAYKANLENLEG--CHNYYPRPY---TGLSREHFKRKNE 164 (360)
T ss_pred hhhheeec-ccCCHHHHHHHhcCCeEEEEchhhhHHHHHHHHHhccchhhhhh--cccccCCcc---cCccHHHHHHHHH
Confidence 00100 1111111 111222345555554444455555 2222 4321 1223567788888
Q ss_pred HHHhhCCCcEEEEeC
Q 009560 363 IVRKYSPTAYVIVCQ 377 (532)
Q Consensus 363 aIR~~~~~~~Viv~~ 377 (532)
.++..+.....++++
T Consensus 165 ~fk~~~i~t~AFis~ 179 (360)
T COG3589 165 IFKEYNIKTAAFISS 179 (360)
T ss_pred HHHhcCCceEEEEec
Confidence 899999887776653
|
|
| >PRK09249 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=80.37 E-value=13 Score=40.42 Aligned_cols=122 Identities=13% Similarity=0.046 Sum_probs=72.9
Q ss_pred cCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHHcCC-EEEEEcCC-CCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEAYNI-KCIIDLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 225 ~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k~Gi-~VILDlH~-~pGsqn~~~~sg~ 301 (532)
-+|++.++.|+++|+|.|-|.|. .+ ++..-..+ .....+.+.++++.++++|+ .|-+|+-. .||
T Consensus 148 ~lt~e~l~~l~~aG~~risiGvq--S~-~~~~L~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg---------- 214 (453)
T PRK09249 148 ELDLEMLDALRELGFNRLSLGVQ--DF-DPEVQKAVNRIQPFEFTFALVEAARELGFTSINIDLIYGLPK---------- 214 (453)
T ss_pred cCCHHHHHHHHHcCCCEEEECCC--CC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEccCCC----------
Confidence 46899999999999998877762 22 11100001 12367788899999999999 78888753 232
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
.+.+.+.+.++.+.+ .+ -..+..+.+..+|... -.+.+...+.+..+.+.+++.+-.+
T Consensus 215 ----------qt~e~~~~~l~~~~~-l~-~~~i~~y~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 282 (453)
T PRK09249 215 ----------QTPESFARTLEKVLE-LR-PDRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLAILQQTIETLTEAGYQY 282 (453)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEccCccchhhhhHhcCCCcccCCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 223344444444443 21 1234445555555420 1134556677778888888776544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 532 | ||||
| 1eqp_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans Length | 8e-28 | ||
| 3n9k_A | 399 | F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 9e-28 | ||
| 2pc8_A | 400 | E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida | 1e-27 | ||
| 2pbo_A | 400 | E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida A | 1e-27 | ||
| 2pb1_A | 400 | Exo-b-(1,3)-glucanase From Candida Albicans In Comp | 1e-27 | ||
| 1cz1_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 | 2e-27 | ||
| 3o6a_A | 399 | F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 5e-27 | ||
| 2pf0_A | 400 | F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida | 7e-27 | ||
| 1h4p_A | 408 | Crystal Structure Of Exo-1,3-Beta Glucanse From Sac | 6e-21 | ||
| 1cec_A | 343 | A Common Protein Fold And Similar Active Site In Tw | 3e-10 | ||
| 1cen_A | 343 | Cellulase (Celc) Mutant With Glu 140 Replaced By Gl | 4e-10 | ||
| 3mmu_A | 317 | Crystal Structure Of Endoglucanase Cel5a From The H | 2e-06 | ||
| 3azr_A | 317 | Diverse Substrates Recognition Mechanism Revealed B | 2e-06 | ||
| 3amg_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 1e-05 | ||
| 3aof_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 1e-05 | ||
| 1vjz_A | 341 | Crystal Structure Of Endoglucanase (Tm1752) From Th | 8e-04 |
| >pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans Length = 394 | Back alignment and structure |
|
| >pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A Length = 399 | Back alignment and structure |
|
| >pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A Length = 400 | Back alignment and structure |
|
| >pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Length = 400 | Back alignment and structure |
|
| >pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution Length = 394 | Back alignment and structure |
|
| >pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A Length = 399 | Back alignment and structure |
|
| >pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae Length = 408 | Back alignment and structure |
|
| >pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 343 | Back alignment and structure |
|
| >pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln Complexed With Cellohexaose Length = 343 | Back alignment and structure |
|
| >pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The Hyperthermophilic Thermotoga Maritima Length = 317 | Back alignment and structure |
|
| >pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By Thermotoga Maritima Cel5a Structures In Complex With Cellobiose Length = 317 | Back alignment and structure |
|
| >pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Cellobiose Substrate, Mutant Form Length = 317 | Back alignment and structure |
|
| >pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Mannotriose Substrate Length = 317 | Back alignment and structure |
|
| >pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From Thermotoga Maritima At 2.05 A Resolution Length = 341 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 532 | |||
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 5e-60 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 3e-07 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 4e-58 | |
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 6e-08 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 1e-54 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 2e-51 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 3e-45 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 2e-37 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 2e-27 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 4e-27 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 3e-26 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 6e-26 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 3e-25 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 3e-25 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 3e-25 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 5e-25 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 5e-24 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 1e-23 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 2e-23 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 2e-22 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 1e-21 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 2e-21 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 1e-20 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 2e-20 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 5e-20 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 1e-19 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 2e-19 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 3e-19 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 2e-18 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 2e-17 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 2e-15 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 3e-15 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 9e-14 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 8e-10 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 2e-04 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 1e-09 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 2e-08 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 5e-08 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 2e-07 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 1e-06 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 1e-07 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-05 |
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 202 bits (515), Expect = 5e-60
Identities = 81/365 (22%), Positives = 141/365 (38%), Gaps = 45/365 (12%)
Query: 180 MPGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGI 239
P + T + +Y G + AK L+ H +TF +DF + G
Sbjct: 29 TPSLFEAFRTNDDNDEGIP-VDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGF 87
Query: 240 NTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299
N VRIP+G+W D G LD A+ WA ++K +DLH A GSQNG ++S
Sbjct: 88 NLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNS 147
Query: 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPA---LLGIELLNEPSAATVPLD-ILVP 355
R + + ++ T++V++++ +Y+ ++GIEL+NEP + +D +
Sbjct: 148 GLR-DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKND 206
Query: 356 YYKQGYQIVRKYSPTAYVIVCQRIGNADP--LELYQANIGLHNIVVDLHYYNLFDTFFVN 413
Y Y+ +R + VI+ + N G + +D H+Y +F + +
Sbjct: 207 YLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLE 266
Query: 414 MSTVDNILFIYKSREAQLQA-------------------LNNANGPLVFIGEWVNEWNVT 454
S ++I + L LN+ + G WVN +
Sbjct: 267 RSIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTS 326
Query: 455 S----------------GTQKDYQDFGSAQLEVYNAASFGWAYWTLKN-DRKHWDFEWNI 497
S +++ + + AQL+ + GW W K WD + +
Sbjct: 327 SYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRG-GWIIWCYKTESSLEWDAQRLM 385
Query: 498 RNNYL 502
N
Sbjct: 386 FNGLF 390
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 3e-07
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 32 NSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLD 65
+RGVN+GGWL++E +I PSLF+ D D
Sbjct: 10 GEPIRGVNIGGWLLLEPYITPSLFEAFRTNDDND 43
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 197 bits (502), Expect = 4e-58
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 39/339 (11%)
Query: 200 HGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAP 259
+Y G E A +L++H +T+IT +DF + G+N VRIP+G+W AF P
Sbjct: 48 VDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDP 106
Query: 260 FIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLD 319
++ G ++ L+ AL WA NI+ IDLH APGSQNG ++S + ++ D TL+
Sbjct: 107 YVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNS-GLRDSYNFQNGDNTQVTLN 165
Query: 320 VIDFLASRYAKHP---ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376
V++ + +Y + ++GIELLNEP + +D L ++ GY +R+ VI+
Sbjct: 166 VLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIH 225
Query: 377 QRI-GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYK-----SREAQ 430
G N+VVD H+Y +F ++ + D+I +E+
Sbjct: 226 DAAQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESH 285
Query: 431 LQALNNANGPLVFIGEWVNEWNVTS--------------------------GTQKDYQDF 464
+ + L +W+N N + + D + +
Sbjct: 286 WNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRY 345
Query: 465 GSAQLEVYNAASFGWAYWTLKN-DRKHWDFEWNIRNNYL 502
AQL+ + + GW +W+ K + W F+ N
Sbjct: 346 IEAQLDAFEY-TGGWVFWSWKTENAPEWSFQTLTYNGLF 383
|
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 6e-08
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 25 SVEGLHGNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDG 66
+V + N+ +RGVNLGGW V+E ++ PSLF+ NG+ G
Sbjct: 4 NVAWDYDNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSG 45
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 186 bits (474), Expect = 1e-54
Identities = 63/326 (19%), Positives = 110/326 (33%), Gaps = 50/326 (15%)
Query: 212 ERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNA 271
+ + K H +TFIT +D + G + VR+P + I D + L +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 272 LSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKH 331
L W + YN+ ++D+H APG + +++ + + + +D+ FLA RY
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTSTL-----FEDPNQQKRFVDIWRFLAKRYINE 129
Query: 332 PALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN 391
+ ELLN+ + + +R+ T ++ + N+ A+
Sbjct: 130 REHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLAD 187
Query: 392 IGLHNIVVDLHYYNLFD-----TFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGE 446
I IV + H+YN F + + N Y + ++ N F+ E
Sbjct: 188 IDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMME 247
Query: 447 WVNEWNVTSGTQKDYQD----------------FGS--------------AQLEVYNAAS 476
N +KD + FG + +
Sbjct: 248 LNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISLLEEYD 307
Query: 477 FGWAYWTLKN--------DRKHWDFE 494
G A W K DRK E
Sbjct: 308 IGGAVWNYKKMDFEIYNEDRKPVSQE 333
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 2e-51
Identities = 60/312 (19%), Positives = 93/312 (29%), Gaps = 25/312 (8%)
Query: 216 EVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWA 275
E EDF ++ + N VRIP+ + D P E +D + W
Sbjct: 27 EAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWG 86
Query: 276 EAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPA-L 334
E Y I I LH APG E + T W + F+A RY +
Sbjct: 87 EKYGIHICISLHRAPGYSVNKEVE---EKTNLWKDETAQEAFIHHWSFIARRYKGISSTH 143
Query: 335 LGIELLNEPSAAT---VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN 391
L L+NEP + ++ K+ +RK P +I+ P++
Sbjct: 144 LSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPVDDLTIE 203
Query: 392 IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVF-------- 443
N V Y F VD+ F N +
Sbjct: 204 ----NTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIK 259
Query: 444 -----IGEWVNEWNVTSGTQK-DYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNI 497
I + E + T + LE++ + G+A W + D E
Sbjct: 260 LRQKGIEVFCGEMGAYNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILDSERKD 319
Query: 498 RNNYLQLGNSPN 509
G+ +
Sbjct: 320 VEYEEWYGHKLD 331
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 3e-45
Identities = 50/287 (17%), Positives = 94/287 (32%), Gaps = 32/287 (11%)
Query: 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYN 279
I E F+ + G + VRIP+ W PP + + +D ++ A
Sbjct: 28 GDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRG 87
Query: 280 IKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIEL 339
+ +I++H N E + + L + +A RY +P L E+
Sbjct: 88 LAVVINIHHYEELMNDPEE--------------HKERFLALWKQIADRYKDYPETLFFEI 133
Query: 340 LNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ-RIGNADPLELYQANIGLHNIV 398
LN P P + ++ +++R +I+ G LE N +
Sbjct: 134 LNAPHGNLTP-EKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSI 192
Query: 399 VDLHYYNLFDTFFVNMSTVDNILFIYKSR----------EAQLQALNN---ANGPLVFIG 445
V +HYYN F+ V+ + + + N ++IG
Sbjct: 193 VTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIG 252
Query: 446 EWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492
E+ ++ + F + + AYW + +D
Sbjct: 253 EFGAYRKADLESRIKWTSF---VVREMEKRRWSLAYWEFCSGFGVYD 296
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 2e-37
Identities = 50/287 (17%), Positives = 95/287 (33%), Gaps = 31/287 (10%)
Query: 219 KRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAY 278
+ +I E F + G ++VRIP+ W P L+ + + + A
Sbjct: 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKN 94
Query: 279 NIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIE 338
++ II+ H Y +++ +A + +P L E
Sbjct: 95 DLVVIINCHHFEELY--------------QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFE 140
Query: 339 LLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIV 398
+ NEP+ P Y + +RK +P+ VI+ + + NI+
Sbjct: 141 IFNEPAQNLTP-TKWNELYPKVLGEIRKTNPSRIVIIDVPNWSNYSYVRELKLVDDKNII 199
Query: 399 VDLHYYNLFDTFFVNMSTVDNILFI---YKSREAQLQALNN----------ANGPLVFIG 445
V HYY F+ V L I ++ ++ +++ + N N +F+G
Sbjct: 200 VSFHYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKYVSEWAKKNNVPIFLG 259
Query: 446 EWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492
E+ + + + F AYW +D
Sbjct: 260 EFGAYSKA---DMESRVKWTKTVRRIAEEFGFSLAYWEFCAGFGLYD 303
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-27
Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 41/268 (15%)
Query: 221 HRNTFITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYN 279
++ + +L GI R + D P+ + A+ A+
Sbjct: 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPS-----VKNKVKEAVEAAKELG 118
Query: 280 IKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIEL 339
I IID H + + ++S Y P ++ E+
Sbjct: 119 IYVIIDWHILNDGNPN----------------QNKEKAKEFFKEMSSLYGNTPNVI-YEI 161
Query: 340 LNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVV 399
NEP+ + PY ++ ++RK P +IV + D + + N++
Sbjct: 162 ANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMY 221
Query: 400 DLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459
LH+Y F+ + + P +F+ EW + SG
Sbjct: 222 ALHFYAGTHGQFLR---------------DKANYALSKGAP-IFVTEW--GTSDASGNGG 263
Query: 460 DYQDFGSAQLEVYNAASFGWAYWTLKND 487
+ D L+ ++ + W W L +
Sbjct: 264 VFLDQSREWLKYLDSKTISWVNWNLSDK 291
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-27
Identities = 57/311 (18%), Positives = 98/311 (31%), Gaps = 41/311 (13%)
Query: 206 ANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG--- 262
N +G E V+ + + + G NT+R+P I P
Sbjct: 26 INWFGFETCNYVVHGLWSRDYR-SMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 263 -------GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYIS 315
SL+ +D +++A ++ I+D H S + +S +
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQ---------SALWYTSSVSEA 135
Query: 316 QTLDVIDFLASRYAKHPALLGIELLNEP-----SAATVPLDILVPYYKQGYQIVRKYSPT 370
+ + LA RY +P ++G +L NEP P ++ V +P
Sbjct: 136 TWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPN 195
Query: 371 AYVIV----------CQRIGNADPLELYQANIGL-HNIVVDLHYYNLFDTFFVNMSTVDN 419
+ V GN Y + + + +V H Y S
Sbjct: 196 LLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTF 255
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEV---YNAAS 476
+ L N N V++GE+ + S T + + L Y A S
Sbjct: 256 PNNMPGIWNKNWGYLFNQNIAPVWLGEFG--TTLQSTTDQTWLKTLVQYLRPTAQYGADS 313
Query: 477 FGWAYWTLKND 487
F W +W+ D
Sbjct: 314 FQWTFWSWNPD 324
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 47/319 (14%), Positives = 93/319 (29%), Gaps = 43/319 (13%)
Query: 221 HRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNI 280
N +T E + G ++RIPV + P L + + +A +
Sbjct: 65 WGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGL 124
Query: 281 KCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELL 340
II++H + + V +A++++ + L E +
Sbjct: 125 YVIINIH----GDGYNSVQGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESM 180
Query: 341 NEP------SAATVPLDILVPYYKQGYQIVRK---YSPTAYVIV-------------CQR 378
NE + + L Y + VR+ + +++V
Sbjct: 181 NEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGNYGF 240
Query: 379 IGNADPLELYQANIGLHNIVVDLHYYNLFD---------TFFVNMSTVDNILFIYKSREA 429
D I++ HYY+ +D T + ST + +
Sbjct: 241 TLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDY 300
Query: 430 QLQALNNA------NGPLVFIGEW--VNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAY 481
+ G V IGE+ +++ + S + A Y
Sbjct: 301 LESQFKSMYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVY 360
Query: 482 WTLKNDRKHWDFEWNIRNN 500
W ++ +H +N NN
Sbjct: 361 WDNGHNGQHGFALFNRSNN 379
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 6e-26
Identities = 37/281 (13%), Positives = 75/281 (26%), Gaps = 36/281 (12%)
Query: 223 NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC 282
N T + F L + N RIP W F P L+ + + +
Sbjct: 60 NPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFV 119
Query: 283 IIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342
I++LH + + +A + + L E LNE
Sbjct: 120 ILNLHHETW-----------NHAFSETLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNE 168
Query: 343 P----------SAATVPLDILVPYYKQGYQIVRKY---SPTAYVIVCQRIGNADPLELYQ 389
P D + + VR +P ++++ +
Sbjct: 169 PRKNDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNN 228
Query: 390 ANIGLH--NIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNA------NGPL 441
++ +H Y ++ F +N F + +N G
Sbjct: 229 FIFPEDDDKVIASVHAYAPYN-FALNNGEGAVDKFDAAGKRDLEWNINLMKKRFVDQGIP 287
Query: 442 VFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYW 482
+ +GE+ + + +F ++ +W
Sbjct: 288 MILGEYGAMNRDNEEDRATWAEFYMEKVTAMG---VPQIWW 325
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 3e-25
Identities = 46/265 (17%), Positives = 88/265 (33%), Gaps = 42/265 (15%)
Query: 225 FITIEDFNFLYRH-GINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
F+ E +L GIN R + E + A+ A +I I
Sbjct: 43 FVNYESMKWLRDDWGINVFRAAMYT-----SSGGYIDDPSVKEKVKEAVEAAIDLDIYVI 97
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
ID H + Y + D D ++ Y +P ++ E+ NEP
Sbjct: 98 IDWHILSDNDPN----------------IYKEEAKDFFDEMSELYGDYPNVI-YEIANEP 140
Query: 344 SAATVPL-DILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLH 402
+ + V + + PY ++ I+R P +IV + D + N++ H
Sbjct: 141 NGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAFH 200
Query: 403 YYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQ 462
+Y ++ Q+ + +F+ EW + +G +
Sbjct: 201 FYAGTHG---------------QNLRDQVDYALDQGAA-IFVSEWG--TSAATGDGGVFL 242
Query: 463 DFGSAQLEVYNAASFGWAYWTLKND 487
D ++ + + WA W+L +
Sbjct: 243 DEAQVWIDFMDERNLSWANWSLTHK 267
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 3e-25
Identities = 47/279 (16%), Positives = 98/279 (35%), Gaps = 32/279 (11%)
Query: 223 NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC 282
N T N + G NT+R+PV W P ++ ++ ++A ++
Sbjct: 40 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYV 99
Query: 283 IIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342
II+LH + +Q V +A+ + K+ L E +NE
Sbjct: 100 IINLHHENEWLKPF----------YANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNE 149
Query: 343 P----------SAATVPLDILVPYYKQGYQIVRK---YSPTAYVIVCQRIGNADPLELYQ 389
P + +++ Y +R + T Y++V +A +
Sbjct: 150 PRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTIND 209
Query: 390 ANIGLH--NIVVDLHYYNLFD-TFFVNMSTVDNILFIYKSREAQLQALNN---ANGPLVF 443
I + ++V LH Y+ + +N ++ + S +++ A+ N NG V
Sbjct: 210 LVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRAVV 269
Query: 444 IGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYW 482
IGE + + + + ++ + + +W
Sbjct: 270 IGEMGSINKNNTAARVTHAEYYAKSAKARG---LTPIWW 305
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 40/268 (14%)
Query: 223 NTFITIEDFNFL-YRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK 281
+ +T + L Y + +R+ + P G + + + A A +
Sbjct: 40 DHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPR----GFTDRMHQLIDMATARGLY 95
Query: 282 CIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN 341
I+D H + + +A R+A +L E+ N
Sbjct: 96 VIVDWHILTPGD----------------PHYNLDRAKTFFAEIAQRHASKTNVL-YEIAN 138
Query: 342 EPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV-CQRIGNADPLELYQANIGLHNIVVD 400
EP+ + + Y ++ ++R+ P + +IV + + E N V
Sbjct: 139 EPNGVSW--ASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPVNA 196
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEW-VNEWNVTSGTQK 459
+ F F S DN L + + VF+ E+ +
Sbjct: 197 SNIMYAFH--FYAASHRDNYLNALREA---------SELFPVFVTEFGTETYTGDGANDF 245
Query: 460 DYQDFGSAQLEVYNAASFGWAYWTLKND 487
D +++ GW W +D
Sbjct: 246 QMAD---RYIDLMAERKIGWTKWNYSDD 270
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 5e-25
Identities = 48/300 (16%), Positives = 89/300 (29%), Gaps = 56/300 (18%)
Query: 194 IVANN----LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRH-GINTVRIPVGW 248
I+A G + + F T E +R +G
Sbjct: 12 ILAGGENTSFAG----PSLFWSNTGW-----GAEKFYTAETVAKAKTEFNATLIRAAIGH 62
Query: 249 WIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDW 308
G++ LD ++ A A ++ IID H
Sbjct: 63 G-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFH-------------------SH 102
Query: 309 PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYS 368
A + + + +A++Y ++ ++ E+ NEP + + + PY + +R
Sbjct: 103 EAHTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQISWV-NDIKPYAETVIDKIRAID 160
Query: 369 PTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSRE 428
P ++V + D Q I NI LH+Y +S
Sbjct: 161 PDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHFYAGTHG---------------QSYR 205
Query: 429 AQLQALNNANGPLVFIGEW-VNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487
+ Q + +F EW + G + D A + + + A W L +
Sbjct: 206 NKAQTALDNGIA-LFATEWGTVNADGNGGVNINETD---AWMAFFKTNNISHANWALNDK 261
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 1e-23
Identities = 39/267 (14%), Positives = 77/267 (28%), Gaps = 31/267 (11%)
Query: 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
+ + L G+N R+P L L ++ +
Sbjct: 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAV 89
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
+D H + + SD+ +AS++A +P ++ + NE
Sbjct: 90 VDPH----------NYGRYYNSIISSPSDFE----TFWKTVASQFASNPLVI-FDTDNEY 134
Query: 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGL-------HN 396
+++ + +R T+ I + N +
Sbjct: 135 HDMDQ--TLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDK 192
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSG 456
I+ ++H Y D+ S I + R ANG IGE+ +
Sbjct: 193 IIYEMHQY--LDSDGSGTSATCVSSTIGQERITSATQWLRANGKKGIIGEFAGGADNVCE 250
Query: 457 T-QKDYQDFGSAQLEVYNAASFGWAYW 482
T D+ + +V+ G +W
Sbjct: 251 TAITGMLDYMAQNTDVW----TGAIWW 273
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 2e-23
Identities = 42/270 (15%), Positives = 80/270 (29%), Gaps = 47/270 (17%)
Query: 221 HRNTFITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYN 279
F T + L + + VR +G + G+ ++ + A A +
Sbjct: 34 GGEKFYTADTVASLKKDWKSSIVRAAMGVQ---ESGGYLQDPAGNKAKVERVVDAAIAND 90
Query: 280 IKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIEL 339
+ II H A + S+ + +A +Y P ++ E+
Sbjct: 91 MYAIIGWH-------------------SHSAENNRSEAIRFFQEMARKYGNKPNVI-YEI 130
Query: 340 LNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVV 399
NEP + + + PY + +R P +IV + + E + I NI
Sbjct: 131 YNEPLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAY 189
Query: 400 DLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459
LH+Y + + + N L +V EW +
Sbjct: 190 TLHFYAGTHGESL---------------RNKARQALNNGIAL-----FVTEWGTVNADGN 229
Query: 460 DYQDFGSAQ--LEVYNAASFGWAYWTLKND 487
+ + + A W L +
Sbjct: 230 GGVNQTETDAWVTFMRDNNISNANWALNDK 259
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 96.8 bits (241), Expect = 2e-22
Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 51/267 (19%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288
+ F + HG NTVR+ + + + + P+ + N +S + + C++++H
Sbjct: 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPS--------DVANVISLCKQNRLICMLEVHD 87
Query: 289 APGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP-SAAT 347
G S W L S + I + NEP +
Sbjct: 88 TTGYGEQSGASTLDQAVDYWIE-------------LKSVLQGEEDYVLINIGNEPYGNDS 134
Query: 348 VPLDILVPYYKQGYQIVRKYSPTAYVIV-----CQRIGNA--DPLELYQANIGLHNIVVD 400
+ Q +R ++V Q N + + A+ N V
Sbjct: 135 ATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFS 194
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460
+H Y ++ ST+ + L+ NA P + IGE+ D
Sbjct: 195 IHMYGVYS----QASTITS----------YLEHFVNAGLP-LIIGEF-------GHDHSD 232
Query: 461 YQDFGSAQLEVYNAASFGWAYWTLKND 487
+ G+ W+ +
Sbjct: 233 GNPDEDTIMAEAERLKLGYIGWSWSGN 259
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 94.1 bits (234), Expect = 1e-21
Identities = 35/267 (13%), Positives = 76/267 (28%), Gaps = 54/267 (20%)
Query: 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL 286
+ G NT+RI + ++ D ++ + + AE + ++++
Sbjct: 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDD--------IDTIREVIELAEQNKMVAVVEV 84
Query: 287 HAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA 346
H A G + +++ +D + + I + NE
Sbjct: 85 HDATGRDS----------------RSDLNRAVDYWIEMKDALIGKEDTVIINIANEWY-G 127
Query: 347 TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI------GNADPLELYQANIGLHNIVVD 400
+ Y +R T ++V D + L N +
Sbjct: 128 SWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKNTMFS 187
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460
+H Y + +TV + + + + + + IGE+ G +
Sbjct: 188 IHMYEYAGG---DANTVRS----------NIDRVIDQDLA-LVIGEF--------GH-RH 224
Query: 461 YQDFGSAQLEVYNAASFGWAYWTLKND 487
L GW W+ K +
Sbjct: 225 TDVDEDTILSYSEETGTGWLAWSWKGN 251
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 94.7 bits (235), Expect = 2e-21
Identities = 43/299 (14%), Positives = 83/299 (27%), Gaps = 35/299 (11%)
Query: 197 NNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDP 256
G + K + + +F+ G+ R+PVGW + +
Sbjct: 17 CTTDGTC--VTSKVYPPLKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVNNNL 74
Query: 257 PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQ 316
S+ D + + CI+D+H + A +G +Q
Sbjct: 75 GGNLDSTSISKYDQLVQGCLSLGAYCIVDIH----------NYARWNGGIIGQGGPTNAQ 124
Query: 317 TLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV- 375
+ LAS+YA + ++NEP + ++ +R T+ I
Sbjct: 125 FTSLWSQLASKYASQSRVW-FGIMNEPHDVNINT--WAATVQEVVTAIRNAGATSQFISL 181
Query: 376 -----------CQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIY 424
A ++ + N++ D+H Y D+ I
Sbjct: 182 PGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKY--LDSDNSGTHAECTTNNID 239
Query: 425 KSREAQLQALNNANGPLVFIGEW-VNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYW 482
+ L N + E + + +VY G+ W
Sbjct: 240 GAFSPLATWLRQNNRQ-AILTETGGGNVQSCIQDMCQQIQYLNQNSDVY----LGYVGW 293
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 92.3 bits (229), Expect = 1e-20
Identities = 36/268 (13%), Positives = 77/268 (28%), Gaps = 54/268 (20%)
Query: 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL 286
+ G NT+RI + ++ D ++ + + AE + ++++
Sbjct: 56 ASTAIPAIAEQGANTIRIVLSDGGQWEKDD--------IDTVREVIELAEQNKMVAVVEV 107
Query: 287 HAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA 346
H A G + + + +D + + I + NE
Sbjct: 108 HDATGRDS----------------RSDLDRAVDYWIEMKDALIGKEDTVIINIANEWY-G 150
Query: 347 TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANI------GLHNIVVD 400
+ Y +R T ++V P ++ L N +
Sbjct: 151 SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKNTIFS 210
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460
+H Y + +TV + + + + + + IGE+ G +
Sbjct: 211 IHMYEYAGG---DANTVRS----------NIDRVIDQDLA-LVIGEF--------GHRHT 248
Query: 461 YQDF-GSAQLEVYNAASFGWAYWTLKND 487
D L GW W+ K +
Sbjct: 249 DGDVDEDTILSYSEETGTGWLAWSWKGN 276
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 92.1 bits (228), Expect = 2e-20
Identities = 46/316 (14%), Positives = 94/316 (29%), Gaps = 50/316 (15%)
Query: 200 HGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAP 259
+ N +E + T + + + + G NTVRIPV W
Sbjct: 42 FNGTNITNELDYETS------WSGIKTTKQMIDAIKQKGFNTVRIPVSWH-PHVSGSDYK 94
Query: 260 FIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLD 319
+ + +++ + I++ H G S+ +
Sbjct: 95 ISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYM-------ASSKKYITS 147
Query: 320 VIDFLASRYAKHPALLGIELLNEP---------------SAATVPLDILVPYYKQGYQIV 364
V +A+R+A + L E +NEP S ++ + + V
Sbjct: 148 VWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTV 207
Query: 365 RK---YSPTAYVIVCQRIGNADPLELYQANI------GLHNIVVDLHYYNLFDTFFVNMS 415
R + + Y++ + + D + + I+V +H Y ++ + M+
Sbjct: 208 RATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMA 267
Query: 416 TVDNILFIYKSREAQ---------LQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGS 466
+ + Q + + G V IGE T+ +Y +
Sbjct: 268 DGGTNAWNINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYV 327
Query: 467 AQLEVYNAASFGWAYW 482
AQ + W
Sbjct: 328 AQAKARG---ILCILW 340
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 90.8 bits (225), Expect = 5e-20
Identities = 46/276 (16%), Positives = 84/276 (30%), Gaps = 37/276 (13%)
Query: 225 FITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
+ F L G N +R+ + + + + + A +++ I
Sbjct: 53 IVNENAFVALSNDWGSNMIRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVI 107
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP--ALLGIELLN 341
+D H P +D S D + +A Y HP + EL N
Sbjct: 108 VDWHVHAPG---------------DPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELAN 152
Query: 342 EP----------SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN 391
EP + + + Y + +++R+ ++V + P
Sbjct: 153 EPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLRE-KGDNMILVGNPNWSQRPDLSADNP 211
Query: 392 IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEW 451
I NI+ +H+Y + A ++ + VF EW
Sbjct: 212 IDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVA-VFATEWG--T 268
Query: 452 NVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487
+ +G Y D L N + WA W+L N
Sbjct: 269 SQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNK 304
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 90.8 bits (224), Expect = 1e-19
Identities = 49/349 (14%), Positives = 94/349 (26%), Gaps = 66/349 (18%)
Query: 221 HRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNI 280
F + G N VR + W + +P P + L+ +++ + W
Sbjct: 62 GMPQFTEADLAREYADMGTNFVRFLI-SWRSVEPAPGV-YDQQYLDRVEDRVGWYAERGY 119
Query: 281 KCIIDLH-------AAPGSQNGMEHSASRDGTTDW------------------------- 308
K ++D+H P +G A +G W
Sbjct: 120 KVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVM 179
Query: 309 -----------PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLD-----I 352
+ + +A R+A + A++ +L+NEP ++
Sbjct: 180 RAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYDLMNEPFGGSLQGPAFEAGP 239
Query: 353 LVPYYKQGYQIVRKYSPTAYVIVC-QRIGNADPLELYQANI-----GLHNIVVDLHYYNL 406
L Y++ +R+ +V V Q IG L I G I H Y L
Sbjct: 240 LAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPL 299
Query: 407 FDTFFVNMS----TVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQ 462
T+ ++ A + P+ + + + +
Sbjct: 300 PLDIGDGHEGLARTLTDVTIDAWRANTAHTARVLGDVPI-----ILGSFGLDTTLPGARD 354
Query: 463 DFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQ 511
G +YW+ + + N P +
Sbjct: 355 YI-ERVYGTAREMGAGVSYWSSDPGPWGPYLPDGTQTLLVDTLNKPYPR 402
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 90.3 bits (223), Expect = 2e-19
Identities = 50/326 (15%), Positives = 96/326 (29%), Gaps = 59/326 (18%)
Query: 206 ANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPA------- 258
N +G E V+ + + G N +R+P P
Sbjct: 66 VNWFGFETPNHVVHGLWKRNWE-DMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKN 124
Query: 259 PFIGG--SLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQ 316
P + G SL+ ++ + A I ++D H G H T D+ D+I
Sbjct: 125 PDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRI-----GCTHIEPLWYTEDFSEEDFI-- 177
Query: 317 TLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVP-----------------YYKQ 359
+ +A R+ K+ ++G +L NEP + T P ++
Sbjct: 178 --NTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAER 235
Query: 360 GYQIVRKYSPTAYVIV-------------------CQRIGNADPLELYQANIGLHNIVVD 400
+ + K +P + V GN ++ Y N+ + +V
Sbjct: 236 IGKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYS 295
Query: 401 LHYYNLFD-TFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459
H + + + G V IGE+ ++ G
Sbjct: 296 PHVFGPDVYNQPYFGPAKGFPDNLPDIWYHHFGYVKLELGYSVVIGEFGGKYG--HGGDP 353
Query: 460 DYQDFGSAQLEVYNAAS-FGWAYWTL 484
+ + ++ + YW+
Sbjct: 354 RDVIWQNKLVDWMIENKFCDFFYWSW 379
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 88.3 bits (218), Expect = 3e-19
Identities = 47/288 (16%), Positives = 84/288 (29%), Gaps = 27/288 (9%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDP-------------PAPFIGGSLEALDNALSWA 275
F+ + G+ VR+ + P P L+ LD + A
Sbjct: 40 STFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSA 99
Query: 276 EAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD---WPASDYISQTLDVIDFLASRYAKHP 332
E +N+K II G+ + G + + +Q + + SRYA
Sbjct: 100 EQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANST 159
Query: 333 ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC-QRIGNADPLELYQAN 391
A+ EL NEP D++V + Q V+ V + + +G + Y
Sbjct: 160 AIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYT 219
Query: 392 IGLHNIVVDLHYYNLFD--TFFVNMSTVD-NILFIYKSREAQLQALNNANGPLVFIGEWV 448
G D TF + + N + + A A P
Sbjct: 220 YGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGNGWIQTHAAACLAAGKPC-----VF 274
Query: 449 NEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWN 496
E+ + + + L G +W + + +
Sbjct: 275 EEYGAQQNPCTNEAPWQTTSLTTRGMG--GDMFWQWGDTFANGAQSNS 320
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 86.7 bits (214), Expect = 2e-18
Identities = 42/278 (15%), Positives = 81/278 (29%), Gaps = 54/278 (19%)
Query: 223 NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC 282
+ G NTVRI + + D ++ + N +S AE N+
Sbjct: 37 YKDQATTAIEGIANTGANTVRIVLSDGGQWTKD--------DIQTVRNLISLAEDNNLVA 88
Query: 283 IIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342
++++H A G + +++ +D + S + I + NE
Sbjct: 89 VLEVHDATGYDSI----------------ASLNRAVDYWIEMRSALIGKEDTVIINIANE 132
Query: 343 PSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI------GNADPLELYQANIGLHN 396
+ YKQ +R +++ D N
Sbjct: 133 WF-GSWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRN 191
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSG 456
+ +H Y N S V + + N + + IGE+ G
Sbjct: 192 TMFSIHMYEYAGG---NASQVRT----------NIDRVLNQDLA-LVIGEF--------G 229
Query: 457 TQKDYQDFGSAQ-LEVYNAASFGWAYWTLKNDRKHWDF 493
+ D + + GW W+ K + W++
Sbjct: 230 HRHTNGDVDESTIMSYSEQRGVGWLAWSWKGNGPEWEY 267
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 82.5 bits (203), Expect = 2e-17
Identities = 40/299 (13%), Positives = 77/299 (25%), Gaps = 66/299 (22%)
Query: 229 EDFNFLYRHGINTVRIPV----GWWIAFDPDPPAPFIGGS-LEALDNALSWAEAYNIKCI 283
+ + HG N+VR+ + FD + I + + + L A+ +NI
Sbjct: 49 STLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIF 108
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
L Q+ H D S + +A+ AL G +++NEP
Sbjct: 109 FTLWNGAVKQST--HYRLNGLMVDTRKLQ--SYIDHALKPMANALKNEKALGGWDIMNEP 164
Query: 344 ---------------------------SAATVPLDILVPYYKQGYQIVRKYSPTAYVIV- 375
+ + + +++ P A V V
Sbjct: 165 EGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVG 224
Query: 376 ---------CQRIGNADPLELYQANIGLHNIVVDL---HYYNLFDTFFVNMSTVDNILFI 423
N G + + H Y+ + F
Sbjct: 225 SWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNES--------P 276
Query: 424 YKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYW 482
+K + P+V E+N G + + ++ W+
Sbjct: 277 FKHSFSNF----RLKKPMVI-----GEFNQEHGAGMSSESMFEWAYTKGYSGAWTWSRT 326
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 73.2 bits (179), Expect = 2e-15
Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 14/140 (10%)
Query: 41 GGWLVIEGWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGG----GTDVSVTRDV 96
G ++ W S F + GT + I+ Y+ A G G +
Sbjct: 6 SGLDIVGIWWTVSNFG------EISGT-IAIEMDK-GAYIHALDNGLFTLGAPHREVDEG 57
Query: 97 ASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVH 156
S E FT ++S+S ++ G++L + +G VV + + E +E D ++
Sbjct: 58 PSPPEQFTAVKLSDSRIALKSGYGKYLGINSDGLVV-GRSDAIGPREQWEPVF-QDGKMA 115
Query: 157 IKLKSGTYLQATLGNQLTSD 176
+ + +++ + +
Sbjct: 116 LLASNSCFIRCNEAGDIEAK 135
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Length = 491 | Back alignment and structure |
|---|
Score = 72.8 bits (177), Expect = 9e-14
Identities = 39/310 (12%), Positives = 83/310 (26%), Gaps = 33/310 (10%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288
+ + G N V + + P P + G ++ +D + + +I +
Sbjct: 43 DQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGLYLVITIGN 102
Query: 289 APGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP----- 343
+ N D F A RYAK + E+ NEP
Sbjct: 103 GANNGN-----------------HNAQWARDFWKFYAPRYAKETH-VLYEIHNEPVAWGP 144
Query: 344 --SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDL 401
S++T V Y+I+R Y+P V++ G + D+
Sbjct: 145 PYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGG-------KGGAAEALKDI 197
Query: 402 HYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS-GTQKD 460
+N N + + + Q + ++ E+ + G+
Sbjct: 198 RAFNKAVFGNENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFMTEYAGGAWGSGMG 257
Query: 461 YQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLG 520
D S+ + + + ++ + +
Sbjct: 258 GLDVELTYELERLGVSWLTFQYIPPTGVSDDVTKPEYFSALVENSGLSWTPDYGNWPAAR 317
Query: 521 IIFAWLYLHH 530
++ L
Sbjct: 318 GVYGNGGLAR 327
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A Length = 132 | Back alignment and structure |
|---|
Score = 55.8 bits (134), Expect = 8e-10
Identities = 25/134 (18%), Positives = 47/134 (35%), Gaps = 9/134 (6%)
Query: 66 GTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFR-TSQGQFLT 124
+V ++S +++ G V TRD + F + E R T GQFL
Sbjct: 5 HHEVLLRSTETGQFLRINPDG--TVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLR 62
Query: 125 CDGEGCVVSATAKSPSTPETFEIERNNDSRVHIK-LKSGTYLQATLGNQLTSDYPGMPGW 183
+ +G V T F+I + V ++ ++G +L+ +
Sbjct: 63 INPDGTVD-GTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGTVDGTRDRSDPG 121
Query: 184 DDNAATFEMAIVAN 197
F+++ N
Sbjct: 122 ----IQFQISPEGN 131
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A Length = 132 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 2e-04
Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFR-TSQGQFL 123
+V ++S +++ G V TRD + F + E R T GQFL
Sbjct: 46 GNGEVLLRSTETGQFLRINPDGT--VDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFL 103
Query: 124 TCDGEGCVVSATAKSPSTPETFEIERNND 152
+ +G V T F+I +
Sbjct: 104 RINPDG-TVDGTRDRSDPGIQFQISPEGN 131
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 59.7 bits (143), Expect = 1e-09
Identities = 37/332 (11%), Positives = 89/332 (26%), Gaps = 59/332 (17%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGS--------LEALDNALSWAEAYNI 280
++ + L G+N +R+ + P + L+ LD L ++
Sbjct: 66 KELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDM 125
Query: 281 KCIIDLH-------------------AAPGSQNGMEHSASRDGTTDWPAS--------DY 313
++ + E A + + S
Sbjct: 126 TVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKT 185
Query: 314 ISQTLD-VIDFLASRYAKHPALLGIELLNEPS-----AATVPLDILVPYYKQGYQIVRKY 367
+ + + V Y ++ +L NEP I + + ++
Sbjct: 186 LEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTL 245
Query: 368 SPTAYVIV--CQRIGNADPLELYQANIGLHNI-VVDLHYY----NLFDTFFVNMSTVDNI 420
V +G+ + ++++ +I + H + + FD +
Sbjct: 246 DAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAW 305
Query: 421 LFIYKSREAQLQALNNANGPLVF--IGEWVNEWNVTSGTQKDYQD--FGSAQLEVYNAAS 476
A + N PLV G + + + +Y+D F + +
Sbjct: 306 EKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLE 365
Query: 477 F-----GWAYWTLKND--RKHWDFEWNIRNNY 501
G+ W ++ W +++
Sbjct: 366 QGEPSAGYNIWAWNGYGRTTRANYWWQEGDDF 397
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 55.3 bits (132), Expect = 2e-08
Identities = 40/311 (12%), Positives = 87/311 (27%), Gaps = 44/311 (14%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAP--FIGGSLEALDNALSWAEAYNIKCIIDL 286
F ++ +N R P AP + + LD +S A+ Y I I+ L
Sbjct: 46 NTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSL 105
Query: 287 HAAPGSQNGMEHSASRDGTTDWPAS----------------DYISQTLD-VIDFLASRYA 329
+ G + + + + L V Y
Sbjct: 106 VNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYK 165
Query: 330 KHPALLGIELLNEP-SAATVPLDILVPYYKQGYQIVRKYSPTAYVIV-CQRIGNADPLEL 387
P +L EL+NEP + + + + ++ + + + D +
Sbjct: 166 DDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQY 225
Query: 388 Y----------QANIGLHNI-VVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNN 436
+N + I +H Y + + ++ + + + +
Sbjct: 226 NPNSYIFGTNFISNNQVQGIDFTTIHMYP--NQWLPGLTQEAQDKWASQWIQVHIDDSKM 283
Query: 437 ANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKH-WDFEW 495
PL+ I E+ G + A+ + Y +G + K+ W
Sbjct: 284 LKKPLL-IAEF--------GKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFW 334
Query: 496 NIRNNYLQLGN 506
+ + +
Sbjct: 335 QVLGQGMSSFD 345
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 54.3 bits (130), Expect = 5e-08
Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 78 KYVCAESGGGTDVSVTRDVASSWETFTLWRVSESE----FQFRTSQGQFLTCDGEGCVVS 133
KY+ AE+ G V+ + + +TL + + R+ G++L D +G V+
Sbjct: 22 KYLTAEAFGFK-VNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDG-NVT 79
Query: 134 ATAKSPSTPETFEIERNNDSRVHIK-LKSGTYLQAT 168
+ P F I ++D R ++ Y T
Sbjct: 80 CEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGT 115
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 52.4 bits (125), Expect = 2e-07
Identities = 46/288 (15%), Positives = 85/288 (29%), Gaps = 59/288 (20%)
Query: 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDG 127
QV I SVT ++Y + +++V RDV ++ + + +T+ +FL DG
Sbjct: 141 QVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHDG 200
Query: 128 EGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGN-QLTSDYPGMPGWDDN 186
P + +E +V + G YL + + L + G D+
Sbjct: 201 R------LVARPEPATGYTLE-FRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDE- 252
Query: 187 AATFEMAIVANNL-----HGDYQLANGYGHERAKE--------------------VLKRH 221
F + + + A + + H
Sbjct: 253 --LFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCAFRTH 310
Query: 222 RNTFITIED----------------FNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSL 265
+ T+ F+ +R T+R G ++ + G L
Sbjct: 311 TGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN-------GQL 363
Query: 266 EALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDY 313
A +E + +K I ++G GT D S Y
Sbjct: 364 AASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSY 411
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 1e-06
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 14/122 (11%)
Query: 78 KYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAK 137
K+V ++ G ++ + + A E F + ++ FR G F+ C + A
Sbjct: 353 KFVTSKKNG--QLAASVETAGDSELFLMKLINRPIIVFRGEHG-FIGCRKVTGTLDANR- 408
Query: 138 SPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAATFEMAIVAN 197
S+ + F++E ND +IK +G Y + +TS D F
Sbjct: 409 --SSYDVFQLE-FNDGAYNIKDSTGKYWTVGSDSAVTS-------SGDTPVDFFFEFCDY 458
Query: 198 NL 199
N
Sbjct: 459 NK 460
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 53.4 bits (127), Expect = 1e-07
Identities = 48/300 (16%), Positives = 86/300 (28%), Gaps = 48/300 (16%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGS----------------LEALDNAL 272
GI +RI ++ E LD +
Sbjct: 47 SVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTI 106
Query: 273 SWAEAYNIKCIIDL---HAAPGSQNGMEHSASRDGTTDWPAS--------DYISQTLD-V 320
+ A+ IK II L G N D+ Y+S ++ V
Sbjct: 107 AKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHV 166
Query: 321 IDFLASRYAKHPALLGIELLNEPSAAT-VPLDILVPYYKQGYQIVRKYSPTAYVIV---- 375
+ Y + P ++ EL NE T + LV + K+ ++ P V V
Sbjct: 167 NVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVGDEG 226
Query: 376 ------CQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFV-----NMSTVDNILFIY 424
+ + Y G+ + F TF + +S + +
Sbjct: 227 FFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGVSPENYAQWGA 286
Query: 425 KSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTL 484
K E ++ P+V + E+ ++ + + VY+ G +W L
Sbjct: 287 KWIEDHIKIAKEIGKPVV-LEEY--GIPKSAPVNRTAI-YRLWNDLVYDLGGDGAMFWML 342
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Length = 399 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 4e-07
Identities = 34/205 (16%), Positives = 64/205 (31%), Gaps = 21/205 (10%)
Query: 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGG--SLEALDNALSWAEAYNIKCII 284
+ F L G+N VR+ + W + GG LE A A +K +
Sbjct: 50 KQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLA 107
Query: 285 DLH-----AAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIEL 339
D H A P Q + A+ + + T + + + +++
Sbjct: 108 DFHYSDFWADPAKQKAPKAWANLNFEDK--KTALYQYTKQSLKAMK-AAGIDIGM--VQV 162
Query: 340 LNEPSAA---TVPLDILVPYYKQGYQIVRKYSPTAYVIV-CQRIGNADPLELYQANIGLH 395
NE + + + G Q VR+ V + + + H
Sbjct: 163 GNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRH 222
Query: 396 NI---VVDLHYYNLFDTFFVNMSTV 417
++ V YY + N+++V
Sbjct: 223 HVDYDVFASSYYPFWHGTLKNLTSV 247
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 7e-05
Identities = 65/479 (13%), Positives = 137/479 (28%), Gaps = 155/479 (32%)
Query: 132 VSATAKSPSTP-ETFEIERN---NDSRVHIKL---KSGTYLQATLGNQLTSDYP------ 178
+ + PS + +R+ ND++V K + YL+ L L P
Sbjct: 98 IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK--LRQALLELRPAKNVLI 155
Query: 179 -GMPG----WDDNAATFEMAI-VANNLHGDYQLANG-----YGHERAKEVLKRHRNTFIT 227
G+ G W +A+ V + ++ + + E + +
Sbjct: 156 DGVLGSGKTW--------VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207
Query: 228 IEDFNFLYR-HGINTVRIPVGWWIA----FDPDPPAPFIGGSLEALDNALSW----AEAY 278
D N+ R + +++ + A P L L N A+
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE---NCLLVLLNV--QNAKAWNAF 262
Query: 279 NIKC----------IID-LHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASR 327
N+ C + D L AA + ++H T + + LD R
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHH--SMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 328 YAK--HP---ALLGIELLNEPS---------------AATVPLDILVPY-YKQGYQ---I 363
+P +++ + + + L++L P Y++ + +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 364 VRKYSP-TAYVI----------VCQRIGNA---------DPLELYQANIGLHNIVVD--- 400
+ ++ + N P E I + +I ++
Sbjct: 381 FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST---ISIPSIYLELKV 437
Query: 401 -------LH-----YYNLFDTFFVN---MSTVDNILFIYKSREAQLQALNNANGPLVFIG 445
LH +YN+ TF + +D + + L+ + + +F
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPERMTLF-- 493
Query: 446 EWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQL 504
+ + DF + +++D W+ +I N QL
Sbjct: 494 ------------RMVFLDFR-------------FLEQKIRHDSTAWNASGSILNTLQQL 527
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 532 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 100.0 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 100.0 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 99.98 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.98 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 99.98 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 99.97 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.97 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 99.97 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 99.97 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.97 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.96 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.94 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.94 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.92 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.92 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.91 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.88 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.87 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.86 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.85 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.85 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.84 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.77 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.75 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.74 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.73 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.73 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.72 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.72 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.7 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.7 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.69 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.67 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.66 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.66 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.65 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.64 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.61 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.6 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.6 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.55 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.55 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.54 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.54 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.51 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.49 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 99.49 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 99.49 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 99.48 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 99.48 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.47 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 99.44 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 99.44 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.43 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 99.42 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 99.42 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 99.41 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.41 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 99.4 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 99.39 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 99.39 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 99.38 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 99.37 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 99.37 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.37 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.37 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.36 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.36 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 99.34 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.32 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 99.3 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.28 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.26 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.25 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.23 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.16 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.13 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.13 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.11 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.07 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.07 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.05 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 99.02 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.02 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 98.99 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 98.98 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.96 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 98.96 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.93 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.92 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.91 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.91 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 98.86 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 98.82 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.8 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 98.79 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.71 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.65 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.64 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.57 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.57 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 98.57 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.52 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.52 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.48 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.36 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 98.27 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 98.22 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.18 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.17 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.15 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.11 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.09 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 97.98 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.94 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 97.93 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 97.93 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.81 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.76 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 97.17 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 97.05 | |
| 1hcd_A | 118 | Hisactophilin; actin binding; NMR {Dictyostelium d | 97.02 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 96.91 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 96.87 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 96.85 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 96.85 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 96.84 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 96.75 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 96.61 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 96.4 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 96.4 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 96.37 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.33 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 96.27 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 96.17 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 96.1 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 96.05 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 96.05 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 96.04 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 95.98 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 95.76 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 95.75 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 95.66 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 95.61 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 95.5 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 95.49 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 95.49 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 95.45 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 95.19 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 95.1 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 95.04 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 94.99 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 94.97 | |
| 3p6j_A | 142 | De novo designed beta-trefoil architecture with S | 94.85 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 94.74 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 94.52 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 94.46 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 94.34 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 94.31 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 94.19 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 94.14 | |
| 3snv_A | 143 | Symfoil-4T/permutation #1 synthetic protein; beta- | 94.13 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 94.07 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 93.53 | |
| 3snv_A | 143 | Symfoil-4T/permutation #1 synthetic protein; beta- | 93.52 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 93.49 | |
| 3p6i_A | 142 | De novo designed beta-trefoil architecture with S | 93.4 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 92.88 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 92.61 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 92.57 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 92.47 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 92.47 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 92.34 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 92.23 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 92.09 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 91.98 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 91.96 | |
| 1hcd_A | 118 | Hisactophilin; actin binding; NMR {Dictyostelium d | 91.91 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 91.88 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 91.63 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 91.6 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 91.56 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 91.56 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 91.55 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 91.53 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 91.4 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 91.21 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 91.21 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 91.16 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 91.03 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 90.97 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 90.75 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 90.69 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 90.54 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 90.43 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 90.2 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 90.11 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 89.91 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 89.85 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 89.65 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 89.62 | |
| 3p6j_A | 142 | De novo designed beta-trefoil architecture with S | 89.43 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 88.95 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 88.69 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 88.67 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 88.45 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 88.31 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 88.14 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 88.03 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 87.91 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 87.42 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 87.41 | |
| 3q7x_A | 132 | De novo designed beta-trefoil architecture with S | 86.96 | |
| 3phz_A | 286 | Ricin B-related lectin; beta trefoil, saccharide b | 86.89 | |
| 1bfg_A | 146 | Basic fibroblast growth factor; 1.60A {Homo sapien | 86.87 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 86.32 | |
| 1rg8_A | 146 | Heparin-binding growth factor 1; beta-trefoil, hor | 85.96 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 85.76 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 85.56 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 85.37 | |
| 1yht_A | 367 | DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact | 84.43 | |
| 1nun_A | 145 | Fibroblast growth factor-10; beta-trefoil fold, im | 84.06 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 83.96 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 83.55 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 83.01 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 82.97 | |
| 3p6i_A | 142 | De novo designed beta-trefoil architecture with S | 82.94 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 82.47 | |
| 1q1u_A | 144 | FGF-12, fibrobast growth factor homologous factor | 82.25 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 81.91 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 81.56 | |
| 1ihk_A | 174 | GLIA-activating factor; B-trefoil fold, hormone/gr | 81.4 | |
| 1qql_A | 140 | Fibroblast growth factor 7/1 chimera; beta-trefoil | 80.63 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 80.51 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-62 Score=514.12 Aligned_cols=301 Identities=28% Similarity=0.503 Sum_probs=259.8
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHc
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAY 278 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~ 278 (532)
..+||+||+.+|.++|..++++||++||||+||+.||++|+|+|||||+||.+ ++.+++||..+.+++||++|++|+++
T Consensus 47 ~~dE~~l~~~lG~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipi~~~~~-~~~~~~py~~~~~~~ld~vV~~a~~~ 125 (399)
T 3n9k_A 47 PVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAF-QLLDNDPYVQGQVQYLEKALGWARKN 125 (399)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred cccHHHHHHHhCHHHHHHHHHHhhcccCcHHHHHHHHHcCCCEEEEcccHHHc-cCCCCCccchhHHHHHHHHHHHHHHC
Confidence 45899999999999999999999999999999999999999999999999975 45556688777999999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCC---CcEEEEEeccCCCCCCCCcccHHH
Q 009560 279 NIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKH---PALLGIELLNEPSAATVPLDILVP 355 (532)
Q Consensus 279 Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~---p~v~g~EL~NEP~~~~~~~~~l~~ 355 (532)
||+||||+|++||+||+++++|.. +...|.++.++++++++|++||+||+++ |.|++|||+|||..+..+.+.|++
T Consensus 126 Gl~VILDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~ 204 (399)
T 3n9k_A 126 NIRVWIDLHGAPGSQNGFDNSGLR-DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQ 204 (399)
T ss_dssp TCEEEEEEEECTTCSSCCGGGSST-TCCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHH
T ss_pred CCEEEEEecCCCcccccccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHhhcccCCCceEEEEeccCCCCCCCCHHHHHH
Confidence 999999999999999999998865 4568998889999999999999999998 999999999999976556789999
Q ss_pred HHHHHHHHHHhhCCCcEEEEeCCCCCC-CchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH
Q 009560 356 YYKQGYQIVRKYSPTAYVIVCQRIGNA-DPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 356 ~~~~~~~aIR~~~~~~~Viv~~~~~~~-~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~ 434 (532)
|+++++++||+++|+++|++++++... .+..++..+.+++|+||++|+|.+|+.....++.+++++.+|+.. .. +
T Consensus 205 ~~~~a~~~IR~~~p~~~Iii~dg~~~~~~W~~~l~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~~c~~~-~~---~ 280 (399)
T 3n9k_A 205 FFLDGYNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWG-WD---A 280 (399)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTSCHHHHHHHHHHHH-HH---H
T ss_pred HHHHHHHHHHhcCCCCeEEEeCCCCChHHHHhhcccccCCCCEEEEeccccCCCcccccCCHHHHHHHHHHHH-HH---H
Confidence 999999999999999999999887542 334455443467999999999999987777788999999998743 22 2
Q ss_pred HhcCCCcEEEeccCcccCCCC------------------------------------CCHHHHHHHHHHHHHHHHhCCCc
Q 009560 435 NNANGPLVFIGEWVNEWNVTS------------------------------------GTQKDYQDFGSAQLEVYNAASFG 478 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~~------------------------------------a~~~~~~~~~~~ql~~~~~~~~G 478 (532)
.+ .+.|+|||||++..+.+. ..++.+++|+++|+++|++ +.|
T Consensus 281 ~~-~~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~~~~~~~~~~~~~k~~~~~f~~aQ~~~~e~-~~G 358 (399)
T 3n9k_A 281 KK-ESHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFEY-TGG 358 (399)
T ss_dssp HT-CSSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHHHHHHHT-TTE
T ss_pred hc-CCCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCcCcCccccccHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 33 347899999998764210 1245689999999999996 569
Q ss_pred EEEEcccCC-CCCCchHhhHhCCcccCCCC
Q 009560 479 WAYWTLKND-RKHWDFEWNIRNNYLQLGNS 507 (532)
Q Consensus 479 w~yW~~k~e-~~~Ws~~~~~~~g~~~~~~~ 507 (532)
|+||+||.| ...|||+.++++|+||..+.
T Consensus 359 w~fWtwK~e~~~~W~~~~~~~~g~~p~~~~ 388 (399)
T 3n9k_A 359 WVFWSWKTENAPEWSFQTLTYNGLFPQPVT 388 (399)
T ss_dssp EEESCSCCSSCGGGCHHHHHHTTCSCSSTT
T ss_pred EEEeeeecCCCCCCCHHHHHhCCCcCCChh
Confidence 999999999 68899999999999996553
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-58 Score=490.78 Aligned_cols=301 Identities=24% Similarity=0.468 Sum_probs=251.3
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcC-hHHHHHHHHHHHHH
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGG-SLEALDNALSWAEA 277 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~-~l~~Ld~~v~~a~k 277 (532)
..+||+||+.+|.++|..++++||.+++|++||+.||++|+|+|||||+||.+ ++.+++||..+ .+++||++|++|++
T Consensus 47 ~~dE~~l~~~lG~~~a~~~~~~hw~~~~te~d~~~i~~~G~N~VRipi~~~~~-~~~~~~py~~~~~l~~ld~vv~~a~~ 125 (408)
T 1h4p_A 47 PVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAF-QILDDDPYVSGLQESYLDQAIGWARN 125 (408)
T ss_dssp CSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCCCCCSSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEccCCHHHc-ccCCCCCCccccHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999865 44455678776 99999999999999
Q ss_pred cCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCC---CcEEEEEeccCCCCCCCCcccHH
Q 009560 278 YNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKH---PALLGIELLNEPSAATVPLDILV 354 (532)
Q Consensus 278 ~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~---p~v~g~EL~NEP~~~~~~~~~l~ 354 (532)
+||+||||+|++||+||+++++|.. +...|.++.++++++++|++||+||+++ |.|++|||+|||.....+.+.+.
T Consensus 126 ~Gi~VilDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~ia~ry~~~~y~~~Vi~~el~NEP~~~~~~~~~~~ 204 (408)
T 1h4p_A 126 NSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMK 204 (408)
T ss_dssp TTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHH
T ss_pred CCCEEEEECCCCCCccCCccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHcccCCCCeEEEEEeccCCCCCCCCHHHHH
Confidence 9999999999999999999998854 6678999999999999999999999998 99999999999997545678898
Q ss_pred -HHHHHHHHHHHhh-CCCcEEEEeCCCCC-CCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHH
Q 009560 355 -PYYKQGYQIVRKY-SPTAYVIVCQRIGN-ADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQL 431 (532)
Q Consensus 355 -~~~~~~~~aIR~~-~~~~~Viv~~~~~~-~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~ 431 (532)
+|+++++++||++ +++++||+++++.. ..+..++......+|+||++|+|.+|+......+.+++++.+++.. ..
T Consensus 205 ~~~~~~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~~~~~~~nvv~s~H~Y~~~~~~~~~~~~~~~i~~~~~~~-~~- 282 (408)
T 1h4p_A 205 NDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWG-TG- 282 (408)
T ss_dssp HHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHH-HH-
T ss_pred HHHHHHHHHHHHhhcCCCCceEeeecccCchhhhhhccccCCCCCEEEEeeeccCCCCccccCCHHHHHHHHHHHH-HH-
Confidence 9999999999999 89888888876632 2233444433457899999999999875434455667777776432 22
Q ss_pred HHHHhcCCCcEEEeccCcccCCC----------------------------------------CCCHHHHHHHHHHHHHH
Q 009560 432 QALNNANGPLVFIGEWVNEWNVT----------------------------------------SGTQKDYQDFGSAQLEV 471 (532)
Q Consensus 432 ~~~~~~~g~pv~vGEwG~~~~~~----------------------------------------~a~~~~~~~~~~~ql~~ 471 (532)
+ ...+.|+||||||+..+.+ ...++.+++|+++|+++
T Consensus 283 --~-~~~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~c~~~~~~~~~~~~~k~~~~~~~~aq~~~ 359 (408)
T 1h4p_A 283 --V-LNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDA 359 (408)
T ss_dssp --H-TTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred --H-hhcCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCcccCCCChhhccHHHHHHHHHHHHHHHHH
Confidence 2 2346799999999875421 01245689999999999
Q ss_pred HHhCCCcEEEEcccCC-CCCCchHhhHhCCcccCCCC
Q 009560 472 YNAASFGWAYWTLKND-RKHWDFEWNIRNNYLQLGNS 507 (532)
Q Consensus 472 ~~~~~~Gw~yW~~k~e-~~~Ws~~~~~~~g~~~~~~~ 507 (532)
|++.. ||+||+||.+ ...|||+.++++|+||..+.
T Consensus 360 ~~~~~-Gw~fWt~K~e~~~~W~~~~~~~~g~~p~~~~ 395 (408)
T 1h4p_A 360 FEMRG-GWIIWCYKTESSLEWDAQRLMFNGLFPQPLT 395 (408)
T ss_dssp HTTTT-EEEESCSCCSSCSTTCHHHHHHTTSSCSSTT
T ss_pred HhhcC-CeEEEeEecCCCCCCCHHHHHHCCCCCCCCc
Confidence 98555 9999999999 68999999999999997554
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=323.48 Aligned_cols=271 Identities=17% Similarity=0.150 Sum_probs=203.2
Q ss_pred CCCccceeecccChhhHHHHHHhhc-cccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHH
Q 009560 198 NLHGDYQLANGYGHERAKEVLKRHR-NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAE 276 (532)
Q Consensus 198 ~~~~e~~l~~~~G~~~a~~~~~~hw-~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~ 276 (532)
.|.-.|.|.|.+... --+..| ++++|++||+.||++|||+|||||.|+.+.++.++.+++++.+++||++|++|+
T Consensus 18 ~m~~G~nlgn~~d~~----~~e~~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~ 93 (345)
T 3ndz_A 18 EMKVGWNLGNTMDAI----GGETNWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAF 93 (345)
T ss_dssp HHCSEEEETTSTTST----TSTTTTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHH
T ss_pred HhCCCEeeCcCcCCC----CCCCCCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHH
Confidence 455667777766532 123456 467899999999999999999999998777665566788889999999999999
Q ss_pred HcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC--------
Q 009560 277 AYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV-------- 348 (532)
Q Consensus 277 k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~-------- 348 (532)
++||+||||+|+.+|..+ ...|..+..+++++++|++||+||++++.+++|||+|||+....
T Consensus 94 ~~Gi~vildlH~~~~w~~----------~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~ 163 (345)
T 3ndz_A 94 DNDMYVIINLHHENEWLK----------PFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGS 163 (345)
T ss_dssp TTTCEEEECCCSCTTTCC----------CSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCC
T ss_pred HCCCEEEEecCCcccccc----------ccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCC
Confidence 999999999999875321 12344568899999999999999999988889999999986421
Q ss_pred --CcccHHHHHHHHHHHHHhh---CCCcEEEEeCCCCCCCchhhhhcc--CCCCcEEEEeeecccCCCcccc-----CCh
Q 009560 349 --PLDILVPYYKQGYQIVRKY---SPTAYVIVCQRIGNADPLELYQAN--IGLHNIVVDLHYYNLFDTFFVN-----MST 416 (532)
Q Consensus 349 --~~~~l~~~~~~~~~aIR~~---~~~~~Viv~~~~~~~~~~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~-----~~~ 416 (532)
..+.+++++++++++||++ +|+++|+|++..++.+...+..+. ..++|+||++|+|.||..+... ...
T Consensus 164 ~~~~~~l~~~~~~~i~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~P~~~~n~v~s~H~Y~p~~f~~~~~g~~~w~~ 243 (345)
T 3ndz_A 164 YENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGS 243 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCGGGGTSCEEEECGGGCCSHHHHHHCCCGGGCTTEEEEEECCCSHHHHTCTTSCSCCCS
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCcEEEECCCccCcccchhhcccCCCCCCcEEEEEEecCchhcccCCCCCcCCCC
Confidence 1246789999999999999 677899998754344443343332 2478999999999996432111 111
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 417 VDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 417 ~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
......+...+. .+..+.+++|.||+|||||+... .+.+...+|++.+++.+++.++||++|++..
T Consensus 244 ~~~~~~~~~~~~-~~~~~~~~~g~pv~iGEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g~ 309 (345)
T 3ndz_A 244 DYDKSSLDSEFD-AVYNKFVKNGRAVVIGEMGSINK---NNTAARVTHAEYYAKSAKARGLTPIWWDNGY 309 (345)
T ss_dssp HHHHHHHHHHHH-HHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred cccHHHHHHHHH-HHHHHHHHcCCcEEEEeecCCCC---CCHHHHHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 222333433332 23344556789999999999743 3456678899999999999999999999864
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-38 Score=323.46 Aligned_cols=255 Identities=21% Similarity=0.319 Sum_probs=195.1
Q ss_pred hhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 220 ~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
.||+++++++||+.||++|+|+|||||.|+.+.+...+..++++.+++||++|++|+++||+||||+|+.||++.. ..
T Consensus 23 ~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~--~~ 100 (343)
T 1ceo_A 23 EHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQ--DF 100 (343)
T ss_dssp HHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------
T ss_pred hhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccC--CC
Confidence 5899999999999999999999999999986654433356778899999999999999999999999999987632 11
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC-
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR- 378 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~- 378 (532)
+ +...|.+++.++++.++|++|++||+++|.+++|||+|||... ..+.|.+++++++++||+++|+++|++++.
T Consensus 101 ~---~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~ 175 (343)
T 1ceo_A 101 K---TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNN 175 (343)
T ss_dssp -----CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHH
T ss_pred C---cccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCCC
Confidence 1 1256778889999999999999999999999999999999874 357899999999999999999999999863
Q ss_pred CCCCCchhhhhc-cCCCCcEEEEeeecccCCCc-----ccc-------------C---------------------Chhh
Q 009560 379 IGNADPLELYQA-NIGLHNIVVDLHYYNLFDTF-----FVN-------------M---------------------STVD 418 (532)
Q Consensus 379 ~~~~~~~~~~~~-~~~~~nvv~s~H~Y~~f~~~-----~~~-------------~---------------------~~~~ 418 (532)
|++ ...+..+ +..++|+||++|+|.|+..+ +.. . ...+
T Consensus 176 ~~~--~~~~~~~~~~~~~~~v~~~H~Y~~~~ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~~ 253 (343)
T 1ceo_A 176 YNS--PDELKNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLKL 253 (343)
T ss_dssp HHC--GGGGGGSCCCCCSSEEEEEEECCSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCEE
T ss_pred cCC--HHHHhhcCcCCCCCEEEEeeccCccccCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhcccccc
Confidence 321 1222222 24578999999999975211 000 0 0112
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 419 NILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 419 ~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
..+.+...+. .+..+.+..+.||+|||||+... .+.+...+|++++++.+++.++||+||+|+.+
T Consensus 254 ~~~~~~~~~~-~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 318 (343)
T 1ceo_A 254 NKELLRKDLK-PAIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKKM 318 (343)
T ss_dssp SHHHHHHHHH-HHHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred CHHHHHHHHH-HHHHHHHHhCCCEEecccccccC---CChHHHHHHHHHHHHHHHHcCCCeEEeecCCC
Confidence 2233433333 23334455688999999998753 35567889999999999999999999999973
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=322.20 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=194.9
Q ss_pred ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 224 t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
++++++||+.||++|+|+||||+.|+.+.++..+..++++.+++||++|++|+++||+||||+|+.||++. +++...
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~---~~~~~~ 111 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSV---NKEVEE 111 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEES---CTTSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCccc---ccCCCc
Confidence 78899999999999999999999998765543345677889999999999999999999999999998641 122222
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCC-CcEEEEEeccCCCCCCC---CcccHHHHHHHHHHHHHhhCCCcEEEEeCC-
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKH-PALLGIELLNEPSAATV---PLDILVPYYKQGYQIVRKYSPTAYVIVCQR- 378 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~-p~v~g~EL~NEP~~~~~---~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~- 378 (532)
+...|.+++.++++.++|++|++||+++ |.+++|||+|||..... +.+.+.+++++++++||+++|+++|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~ 191 (341)
T 1vjz_A 112 KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLG 191 (341)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCc
Confidence 3457888999999999999999999999 99999999999987532 347899999999999999999999999753
Q ss_pred CCCCCchhhhhccCCCCcEEEEeeecccCCCccccC-------------------ChhhhHHHHHHHHHHHHHHHHhcCC
Q 009560 379 IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNM-------------------STVDNILFIYKSREAQLQALNNANG 439 (532)
Q Consensus 379 ~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~-------------------~~~~~i~~i~~~~~~~~~~~~~~~g 439 (532)
|+. ..+.. ..++|+||++|+|.||+...... ...+..+.+...+.... .+.+ ++
T Consensus 192 ~~~---~~~~~--l~~~n~v~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~-~g 264 (341)
T 1vjz_A 192 YGN---IPVDD--LTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWI-KLRQ-KG 264 (341)
T ss_dssp HHT---BCCTT--CCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHH-GGGG-GT
T ss_pred CCc---ccccc--cCCCCeEEEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHH-HHHH-hC
Confidence 321 11111 24789999999999864211000 01223345554444332 3444 67
Q ss_pred CcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 440 PLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 440 ~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.|++|||||+... .+.+...+|++++++++++.++||+||+|+.
T Consensus 265 ~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 308 (341)
T 1vjz_A 265 IEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRG 308 (341)
T ss_dssp CEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBS
T ss_pred CCeEEeccccccC---CChHHHHHHHHHHHHHHHHcCCceEEEecCC
Confidence 8999999998643 3466788999999999999999999999997
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=313.45 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=194.0
Q ss_pred HhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 219 KRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 219 ~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
++||+++++++||+.||++|+|+|||||.|+...++.++.+++++.++++|++|++|.++||+||||+|+.++
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~------- 107 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEE------- 107 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHH-------
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCcc-------
Confidence 5799999999999999999999999999998776555555777889999999999999999999999998642
Q ss_pred CCCCCCCCCCCCh-hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 299 SASRDGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 299 sg~~~g~~~W~~~-~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
.|.++ ..++++.++|++|++||+++|.+++||++|||... .+.+.+.+++++++++||+++|+++|++++
T Consensus 108 --------~~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~~-~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 108 --------LYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQN-LTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp --------HHHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTT-SCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred --------cccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 12233 57899999999999999999999999999999874 356789999999999999999999999986
Q ss_pred CCCCCCchhhhhcc-CCCCcEEEEeeecccCCCcccc-----C---------ChhhhHHHHHHHHHHHHHHHHhcCCCcE
Q 009560 378 RIGNADPLELYQAN-IGLHNIVVDLHYYNLFDTFFVN-----M---------STVDNILFIYKSREAQLQALNNANGPLV 442 (532)
Q Consensus 378 ~~~~~~~~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~-----~---------~~~~~i~~i~~~~~~~~~~~~~~~g~pv 442 (532)
...+. ...+..+. ..++|+++++|+|.|+..+..+ . ...+..+.+...+.. +..+.++++.||
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~w~g~~~~~~~~~~~~~~-~~~~~~~~g~Pv 256 (320)
T 3nco_A 179 PNWSN-YSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKY-VSEWAKKNNVPI 256 (320)
T ss_dssp SGGGB-GGGGGGCCCCSCTTEEEEEEECCSHHHHTTTCTTSSSCCCSCCCCCCCHHHHHHHHHHHHH-HHHHHHHHTCCE
T ss_pred CCcCc-hhHHhcCCCCCCCCeEEEEEecCCeeeEeccccccCCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHcCCCE
Confidence 43222 22232222 3478999999999986422110 0 011233444444432 444555668899
Q ss_pred EEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 443 FIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 443 ~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
+|||||+... .+.+...+|++.+++++++.++||+||+++.+
T Consensus 257 ~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~~~ 298 (320)
T 3nco_A 257 FLGEFGAYSK---ADMESRVKWTKTVRRIAEEFGFSLAYWEFCAG 298 (320)
T ss_dssp EEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSGG
T ss_pred EEeeeeeecC---CCHHHHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 9999998643 34666788999999999999999999999763
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=298.05 Aligned_cols=248 Identities=19% Similarity=0.306 Sum_probs=188.4
Q ss_pred HhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 219 KRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 219 ~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
+.||.++++++||+.||++|+|+||||+.|+.+.+...+..+++..++++|++|++|+++||+||||+|+.++.++
T Consensus 27 ~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~---- 102 (317)
T 3aof_A 27 EGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN---- 102 (317)
T ss_dssp TTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHH----
T ss_pred CCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccC----
Confidence 4689999999999999999999999999987665433333456778999999999999999999999998764221
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 299 SASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 299 sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
.++..++++.++|++|++||+++|.+++|||+|||... .+.+.|.+++++++++||+++|+++|++++.
T Consensus 103 ----------~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~-~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~ 171 (317)
T 3aof_A 103 ----------DPEEHKERFLALWKQIADRYKDYPETLFFEILNAPHGN-LTPEKWNELLEEALKVIRSIDKKHTIIIGTA 171 (317)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCTT-SCHHHHHHHHHHHHHHHHHHCSSSCEEECCS
T ss_pred ----------CcHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhhCCCCEEEECCC
Confidence 13578899999999999999999998999999999864 4678899999999999999999999999763
Q ss_pred -CCCCCchhhhhc--cCCCCcEEEEeeecccCCCc-----cccC---------ChhhhHHHHHHHHHHHHHHHHhcCCCc
Q 009560 379 -IGNADPLELYQA--NIGLHNIVVDLHYYNLFDTF-----FVNM---------STVDNILFIYKSREAQLQALNNANGPL 441 (532)
Q Consensus 379 -~~~~~~~~~~~~--~~~~~nvv~s~H~Y~~f~~~-----~~~~---------~~~~~i~~i~~~~~~~~~~~~~~~g~p 441 (532)
++.. ..+..+ +..++|+++++|+|.++..+ +... ........+...+. .+..+.++.+.|
T Consensus 172 ~~~~~--~~~~~~~~p~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~g~P 248 (317)
T 3aof_A 172 EWGGI--SALEKLSVPKWEKNSIVTIHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFN-FIEEWSKKNKRP 248 (317)
T ss_dssp GGGSS--TTGGGCCCCTTCCSEEEEEECCCSHHHHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHH-HHHHHHHHHTCC
T ss_pred CcCcH--hHHhhCcCCCCCCCEEEEEeccCCcccccCCCCCcCcccccCCcCcCcHHHHHHHHHHHH-HHHHHHHHcCCC
Confidence 3321 222222 23357999999999986321 1000 00111223333332 223334455789
Q ss_pred EEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 442 VFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 442 v~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
|+|||||+... .+.+...+|++++++.+++.++||+||++++.
T Consensus 249 v~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 291 (317)
T 3aof_A 249 IYIGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSG 291 (317)
T ss_dssp EEEEECCCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSST
T ss_pred EEEeeccccCC---CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 99999998643 34566778999999999999999999999864
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=304.52 Aligned_cols=258 Identities=13% Similarity=0.114 Sum_probs=186.2
Q ss_pred HHHHHHhhcc-ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 009560 214 AKEVLKRHRN-TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGS 292 (532)
Q Consensus 214 a~~~~~~hw~-t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGs 292 (532)
.....+.||. ++++++||+.||++|+|+|||||.|....++.++..++++.+++||++|++|+++||+||||+|+.+..
T Consensus 50 ~~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~~~~~ 129 (376)
T 3ayr_A 50 DQTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHHETWN 129 (376)
T ss_dssp CTTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSCSSC
T ss_pred CCCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcccc
Confidence 3445678996 689999999999999999999999976554444456677899999999999999999999999997521
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC----------CcccHHHHHHHHHH
Q 009560 293 QNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV----------PLDILVPYYKQGYQ 362 (532)
Q Consensus 293 qn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~----------~~~~l~~~~~~~~~ 362 (532)
.. .+ + ..+..++++.++|++||+||++++.+++|||+|||..... ..+.+.+|++++++
T Consensus 130 ~~----~~---~----~~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~~~ 198 (376)
T 3ayr_A 130 HA----FS---E----TLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLK 198 (376)
T ss_dssp CS----CT---T----THHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHHHHHHHH
T ss_pred cc----cc---c----chHHHHHHHHHHHHHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHHHHHHHH
Confidence 10 01 1 1256788999999999999999999899999999987421 11347789999999
Q ss_pred HHHhhCC---CcEEEEeCCCCCCCchhhhhc--cCCCCcEEEEeeecccCCCccc---c---CChhhhHHHHHHHHHHHH
Q 009560 363 IVRKYSP---TAYVIVCQRIGNADPLELYQA--NIGLHNIVVDLHYYNLFDTFFV---N---MSTVDNILFIYKSREAQL 431 (532)
Q Consensus 363 aIR~~~~---~~~Viv~~~~~~~~~~~~~~~--~~~~~nvv~s~H~Y~~f~~~~~---~---~~~~~~i~~i~~~~~~~~ 431 (532)
+||++++ +++|++++..++.+...+..+ |..++|+||++|+|.|+..... + ...+.....+...+. .+
T Consensus 199 aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 277 (376)
T 3ayr_A 199 TVRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPYNFALNNGEGAVDKFDAAGKRDLEWNIN-LM 277 (376)
T ss_dssp HHHTSSTTGGGCCEEECCGGGBCSHHHHHTCCCCTTCTTEEEEEECCCSHHHHTCCSTTCCSSCCHHHHHHHHHHHH-HH
T ss_pred HHHHcCCCCCCcEEEECCCccCccccccccccCCCCCCCEEEEEeecCchhccccCCCCcccccChhhhhHHHHHHH-HH
Confidence 9999955 468888853322232233322 3346899999999999642211 0 111111222222221 12
Q ss_pred HHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 432 QALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 432 ~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.......+.||+|||||+... .+.+...+|++.+++.+++.++||+||++..
T Consensus 278 ~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~w~~~~~~~~~~~~ig~~~W~~g~ 329 (376)
T 3ayr_A 278 KKRFVDQGIPMILGEYGAMNR---DNEEDRATWAEFYMEKVTAMGVPQIWWDNGV 329 (376)
T ss_dssp HHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCCEEEEECSC
T ss_pred HHHHHHcCCcEEEEccccCCC---CCcHHHHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 222344578999999998754 2456678899999999999999999999754
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=294.36 Aligned_cols=237 Identities=14% Similarity=0.081 Sum_probs=176.9
Q ss_pred ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 224 t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
++++++||+.||++|+|+|||||.|..+.++.++.+++++.+++||++|++|+++||+||||+|+.++. . |..
T Consensus 30 ~~~~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~----~--g~~- 102 (305)
T 1h1n_A 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRY----Y--NSI- 102 (305)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEE----T--TEE-
T ss_pred CCCCHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccc----c--CCc-
Confidence 678999999999999999999999754433244567888899999999999999999999999997531 1 110
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCC-CcEEEEeC-CCCC
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSP-TAYVIVCQ-RIGN 381 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~-~~~Viv~~-~~~~ 381 (532)
...+++++++|++||+||+++|.| +|||+|||... +.+.|.+++++++++||++++ +++|++++ .|..
T Consensus 103 -------~~~~~~~~~~~~~ia~~~~~~~~V-~~~l~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~ 172 (305)
T 1h1n_A 103 -------ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTG 172 (305)
T ss_dssp -------CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGB
T ss_pred -------CCcHHHHHHHHHHHHHHhCCCCeE-EEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCccEEEEccccccC
Confidence 123889999999999999999998 89999999874 567899999999999999998 99999875 3432
Q ss_pred C-Cc----hhhhhccCCCCcEEEEeeecccCCCccccC-ChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC
Q 009560 382 A-DP----LELYQANIGLHNIVVDLHYYNLFDTFFVNM-STVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS 455 (532)
Q Consensus 382 ~-~~----~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~-~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~ 455 (532)
. .+ ..+..+.++.+|+||++|+|.+++..-... .... +.+...+. .+..+.+.++.|++|||||+..
T Consensus 173 ~~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~--~~~~~~~~-~~~~~~~~~g~Pv~igEfG~~~---- 245 (305)
T 1h1n_A 173 AWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSS--TIGQERIT-SATQWLRANGKKGIIGEFAGGA---- 245 (305)
T ss_dssp STTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCT--THHHHHHH-HHHHHHHHTTCCEEEEEEECCS----
T ss_pred cccccccCcccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCc--chHHHHHH-HHHHHHHHcCCcEEEEeccCCC----
Confidence 1 11 112223234579999999999865321100 0000 01111122 2223344568899999999864
Q ss_pred CCHHHHHHHHHHHHHHHHhCC---CcEEEEcccC
Q 009560 456 GTQKDYQDFGSAQLEVYNAAS---FGWAYWTLKN 486 (532)
Q Consensus 456 a~~~~~~~~~~~ql~~~~~~~---~Gw~yW~~k~ 486 (532)
+ +...+|++++++.+++.+ +||++|+++.
T Consensus 246 -~-~~~~~~~~~~~~~~~~~~~~~ig~~~W~~g~ 277 (305)
T 1h1n_A 246 -D-NVCETAITGMLDYMAQNTDVWTGAIWWAAGP 277 (305)
T ss_dssp -S-HHHHHHHHHHHHHHHTCTTTEEEEEEEEECT
T ss_pred -C-hHHHHHHHHHHHHHHHcCCeeEEEEEECCCC
Confidence 1 456789999999999999 9999999875
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=297.69 Aligned_cols=242 Identities=20% Similarity=0.240 Sum_probs=175.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCc----------ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG----------GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~----------~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
++||+.||++|+|+||||+.|+.+.+...+..++. ..+++||++|++|+++||+||||+|+ |++++.
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~-~~~~~~-- 123 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR-PDCSGQ-- 123 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE-SBTTBC--
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC-CCCCCC--
Confidence 89999999999999999999876543222223332 38999999999999999999999998 776532
Q ss_pred CCCCCCCCCCCC-ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-----CCcccHHHHHHHHHHHHHhhCCCc
Q 009560 298 HSASRDGTTDWP-ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-----VPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 298 ~sg~~~g~~~W~-~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-----~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
...|. ++..++++.++|++|++||+++|.|++|||+|||.... .....|.+++++++++||+++|++
T Consensus 124 -------~~~w~~~~~~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~ 196 (358)
T 1ece_A 124 -------SALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196 (358)
T ss_dssp -------CSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTS
T ss_pred -------CCCCcCCCccHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCe
Confidence 23453 45679999999999999999999999999999998742 235689999999999999999999
Q ss_pred EEEEeCCC--------CCCCchhhhhcc---CCCCcEEEEeeecccCCCc---cccCChhhhHHHHHHHHHHHHHHHHhc
Q 009560 372 YVIVCQRI--------GNADPLELYQAN---IGLHNIVVDLHYYNLFDTF---FVNMSTVDNILFIYKSREAQLQALNNA 437 (532)
Q Consensus 372 ~Viv~~~~--------~~~~~~~~~~~~---~~~~nvv~s~H~Y~~f~~~---~~~~~~~~~i~~i~~~~~~~~~~~~~~ 437 (532)
+|++++.. ++.+.......+ ...+|+||++|+|.++... .........++ ..+...+..+.++
T Consensus 197 ~v~v~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~---~~~~~~~~~~~~~ 273 (358)
T 1ece_A 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMP---GIWNKNWGYLFNQ 273 (358)
T ss_dssp EEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHH---HHHHHHTHHHHHT
T ss_pred EEEECCCccCCCCCCccCCcCCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHH---HHHHHHHHHHHhc
Confidence 99997532 112222221111 1267899999999987521 11111222222 2222333444556
Q ss_pred CCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEcccCC
Q 009560 438 NGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA------ASFGWAYWTLKND 487 (532)
Q Consensus 438 ~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~------~~~Gw~yW~~k~e 487 (532)
++.||+|||||+... +. ....|+++.++.+++ .++||+||+++.+
T Consensus 274 ~g~Pv~igEfG~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 324 (358)
T 1ece_A 274 NIAPVWLGEFGTTLQ----ST-TDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPD 324 (358)
T ss_dssp TSSCEEEEECCCCCC----SH-HHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSC
T ss_pred CCCCEEEeccCCCCC----CC-ccHHHHHHHHHHHHHhhhcccCCceeeEEcccCC
Confidence 788999999998753 11 234566666666666 8999999999975
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-34 Score=307.60 Aligned_cols=245 Identities=17% Similarity=0.180 Sum_probs=182.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCC-------CC--CCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPP-------AP--FIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~-------~~--~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
++||+.||++|||+||||+.|+.+.+...+ .| +....++.||++|++|+++||+||||+|+.+++++
T Consensus 87 ~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~---- 162 (458)
T 3qho_A 87 EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI---- 162 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSC----
T ss_pred HHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccC----
Confidence 789999999999999999999765432211 12 23468999999999999999999999999876421
Q ss_pred CCCCCCCCCCCCh-hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-----------------CCcccHHHHHHHH
Q 009560 299 SASRDGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-----------------VPLDILVPYYKQG 360 (532)
Q Consensus 299 sg~~~g~~~W~~~-~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-----------------~~~~~l~~~~~~~ 360 (532)
...|.++ ..+++++++|++||+|||++|.|++|||+|||+... .+...|+++++++
T Consensus 163 ------~~~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~a 236 (458)
T 3qho_A 163 ------EPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERI 236 (458)
T ss_dssp ------CSSSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHH
T ss_pred ------CCccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHH
Confidence 2356654 378999999999999999999999999999999631 1346899999999
Q ss_pred HHHHHhhCCCcEEEEeCC-CCC----------------CCchhhhhccC--CCCcEEEEeeecccCCC---ccccC-Chh
Q 009560 361 YQIVRKYSPTAYVIVCQR-IGN----------------ADPLELYQANI--GLHNIVVDLHYYNLFDT---FFVNM-STV 417 (532)
Q Consensus 361 ~~aIR~~~~~~~Viv~~~-~~~----------------~~~~~~~~~~~--~~~nvv~s~H~Y~~f~~---~~~~~-~~~ 417 (532)
+++||+++|+++|++++. |.+ .+.......|. +.+|+||++|+|.+... +|... +..
T Consensus 237 i~aIRa~dp~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~ 316 (458)
T 3qho_A 237 GKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFP 316 (458)
T ss_dssp HHHHHHHCTTCEEEECCBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTT
T ss_pred HHHHHHhCCCCEEEEcCCcccCccccccccccccCcCCCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchH
Confidence 999999999999999863 321 12233333332 35899999999998532 12111 111
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCC-cEEEEcccCC
Q 009560 418 DNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASF-GWAYWTLKND 487 (532)
Q Consensus 418 ~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~-Gw~yW~~k~e 487 (532)
. .+...+.+.+..+.++++.|++|||||..... +.+.. ..+|+++.++.+++.++ +|+||+++++
T Consensus 317 ~---~~~~~w~~~~g~l~~~~~~Pl~igEfG~~~~~-g~~~~-~~~w~~~~~~yl~~~~i~~w~~W~~np~ 382 (458)
T 3qho_A 317 D---NLPDIWYHHFGYVKLELGYSVVIGEFGGKYGH-GGDPR-DVIWQNKLVDWMIENKFCDFFYWSWNPD 382 (458)
T ss_dssp T---THHHHHHHHTTHHHHTTCCCBCBCBCCCCTTS-SSCTH-HHHHHHHHHHHHHHTTCCCEEESCSSSC
T ss_pred H---HHHHHHHhhhhhHhhcCCCcEEEEecCCCcCC-CCCcc-hHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 1 23344455556666677889999999997642 12222 35788999999999997 8999999875
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.52 Aligned_cols=238 Identities=18% Similarity=0.219 Sum_probs=176.0
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
|++.++.||++|+|+|||||.|+.+.+...+.++++..+++||++|++|+++||+||||+|+.++. ++.. .+
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~-~g~~-----~~-- 116 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARW-NGGI-----IG-- 116 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEE-TTEE-----TT--
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCccc-CCcc-----cC--
Confidence 478888999999999999999976654344567888899999999999999999999999998752 1110 01
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCC-cEEEEeCC-CCCC-C
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPT-AYVIVCQR-IGNA-D 383 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~-~~Viv~~~-~~~~-~ 383 (532)
.++...++++++|++||+||+++|.|+ |||+|||+.. +.+.|.+++++++++||+++|+ ++|++++. |++. .
T Consensus 117 --~~~~~~~~~~~~w~~iA~ryk~~~~Vi-~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~ 191 (340)
T 3qr3_A 117 --QGGPTNAQFTSLWSQLASKYASQSRVW-FGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGA 191 (340)
T ss_dssp --TTSSCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTT
T ss_pred --CCHHHHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCCccccccc
Confidence 124578999999999999999999986 9999999874 5788999999999999999999 79999763 4321 0
Q ss_pred ------chhhhhccCC---CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC
Q 009560 384 ------PLELYQANIG---LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT 454 (532)
Q Consensus 384 ------~~~~~~~~~~---~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~ 454 (532)
...+..+.++ ++|+||++|+|.|++.. +...++....+.+.+ +.+..+.++++.|+||||||+..
T Consensus 192 w~~~~~~~~l~~l~dP~~~~~nlvys~H~Y~~~~~s--gt~~~~~~~~i~~~~-~~~~~~~~~~g~pv~iGEfG~~~--- 265 (340)
T 3qr3_A 192 FISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSDNS--GTHAECTTNNIDGAF-SPLATWLRQNNRQAILTETGGGN--- 265 (340)
T ss_dssp TTTTSHHHHHTTCCCTTSCCTTEEEEEECCCSTTSS--SCSSSCCCCSTTTTH-HHHHHHHHHTTCCEEEEEECCCS---
T ss_pred ccccccchhhcccCCCCCCCCCEEEEEEeCCCCCCC--CCCcccchhhHHHHH-HHHHHHHHHcCCcEEEeCccCCC---
Confidence 1112222223 48999999999997643 111111111111111 22334455678999999999842
Q ss_pred CCCHHHHHHHHHHHHHHHHhCC---CcEEEEcccC
Q 009560 455 SGTQKDYQDFGSAQLEVYNAAS---FGWAYWTLKN 486 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~~~---~Gw~yW~~k~ 486 (532)
.+...++++++++.+++.+ +||++|+...
T Consensus 266 ---~~~~~~~~~~~l~~~~~~~~~~~gw~~W~~G~ 297 (340)
T 3qr3_A 266 ---VQSCIQDMCQQIQYLNQNSDVYLGYVGWGAGS 297 (340)
T ss_dssp ---SHHHHHHHHHHHHHHHTTTTTEEEEEEEEEET
T ss_pred ---ChHHHHHHHHHHHHHHHcCCcceEEEEecCCC
Confidence 1456889999999999988 6777776554
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=299.32 Aligned_cols=255 Identities=16% Similarity=0.142 Sum_probs=183.1
Q ss_pred Hhhcc-ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 219 KRHRN-TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 219 ~~hw~-t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
+.+|. .+++++||+.||++|+|+|||||.|+.+.. .++..++++.+++||++|++|+++||+||||+|+.+|..+..
T Consensus 54 e~~W~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~-~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~- 131 (380)
T 1edg_A 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVS-GSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGY- 131 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEE-TTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSB-
T ss_pred cCcCCCCcccHHHHHHHHHcCCCEEEecccHHhhcC-CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCC-
Confidence 45664 468999999999999999999999876543 334456778899999999999999999999999988643321
Q ss_pred CCCCCCCCCCCCChhhHHHH-HHHHHHHHHHhCCCCcEEEEEeccCCCCCCC--Cc-------------ccHHHHHHHHH
Q 009560 298 HSASRDGTTDWPASDYISQT-LDVIDFLASRYAKHPALLGIELLNEPSAATV--PL-------------DILVPYYKQGY 361 (532)
Q Consensus 298 ~sg~~~g~~~W~~~~~~~~~-~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~--~~-------------~~l~~~~~~~~ 361 (532)
.+.+..+..++++ .++|++|++|||++|.+++|||+|||..... .. +.+.+|+++++
T Consensus 132 -------~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~~ 204 (380)
T 1edg_A 132 -------FPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFV 204 (380)
T ss_dssp -------CSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred -------CCccccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHHH
Confidence 1122235788999 9999999999999999999999999987421 11 45689999999
Q ss_pred HHHHhhC---CCcEEEEeCCCCCCCchhhhhc--cCC----CCcEEEEeeecccCCCcccc--------CC--hhhhHHH
Q 009560 362 QIVRKYS---PTAYVIVCQRIGNADPLELYQA--NIG----LHNIVVDLHYYNLFDTFFVN--------MS--TVDNILF 422 (532)
Q Consensus 362 ~aIR~~~---~~~~Viv~~~~~~~~~~~~~~~--~~~----~~nvv~s~H~Y~~f~~~~~~--------~~--~~~~i~~ 422 (532)
++||+++ |+++|++++..++.+...+..+ +.. .+|+||++|+|.|+...... .. .......
T Consensus 205 ~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~d~~~~~~n~v~s~H~Y~~~~f~~~~~~~~g~~~w~~~~~~~~~~ 284 (380)
T 1edg_A 205 NTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSE 284 (380)
T ss_dssp HHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHH
T ss_pred HHHHhcCCCCCCceEEECCCcCCccccccccccCCCCCccccCcEEEEEeecCCcccccccccCCCCCccCCCchhhHHH
Confidence 9999995 8889988753222221222222 222 23999999999986322110 00 0111223
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 423 IYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 423 i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+...+. .+..+....+.||+|||||+... .+.+...+|++++++.+++.++||+||++..
T Consensus 285 i~~~~~-~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gig~~~W~~g~ 344 (380)
T 1edg_A 285 VTWFMD-NIYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNNN 344 (380)
T ss_dssp HHHHHH-HHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHHHHH-HHHHHHHHcCCCEEEEeccCCCC---CChHHHHHHHHHHHHHHHHCCCceEEECCCC
Confidence 332222 22223345578999999998754 2345677899999999999999999999753
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=286.50 Aligned_cols=227 Identities=21% Similarity=0.333 Sum_probs=171.3
Q ss_pred hccccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
++.++++++||+.|+ ++|+|+||||+.|. .++...++..+++||++|++|.++||+||||+|..+|++.
T Consensus 39 ~~~~~~~~~~~~~l~~~~G~N~VRip~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~----- 108 (303)
T 7a3h_A 39 WYGQFVNYESMKWLRDDWGINVFRAAMYTS-----SGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP----- 108 (303)
T ss_dssp HHGGGCSHHHHHHHHHHTCCCEEEEEEESS-----TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST-----
T ss_pred cccccCCHHHHHHHHHhcCCCEEEEEEEeC-----CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCCc-----
Confidence 456789999999998 79999999999762 1222235668999999999999999999999999876421
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc-ccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL-DILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~-~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
....+++.++|++|++||+++|.|+ |||+|||....... +.+.+++++++++||+++|+++|++++.
T Consensus 109 -----------~~~~~~~~~~w~~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~ 176 (303)
T 7a3h_A 109 -----------NIYKEEAKDFFDEMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTG 176 (303)
T ss_dssp -----------TTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCH
T ss_pred -----------hHHHHHHHHHHHHHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 1356788999999999999999998 99999999743333 3788999999999999999999999864
Q ss_pred CCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCH
Q 009560 379 IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQ 458 (532)
Q Consensus 379 ~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~ 458 (532)
.++.+...+...+..++|++|++|+|.+.. .+ .+. +.+. +....+.|++|||||........
T Consensus 177 ~w~~~~~~~~~~p~~~~n~v~s~H~Y~~~~-------~~----~~~----~~~~-~~~~~g~P~~igEfG~~~~~~~g-- 238 (303)
T 7a3h_A 177 TWSQDVHHAADNQLADPNVMYAFHFYAGTH-------GQ----NLR----DQVD-YALDQGAAIFVSEWGTSAATGDG-- 238 (303)
T ss_dssp HHHTBHHHHHTSCCSCTTEEEEEEEETTSC-------CH----HHH----HHHH-HHHHTTCCEEEEEEESSCTTSCS--
T ss_pred CcccchhhHhhCCCCCCCEEEEEEecCCCc-------hH----HHH----HHHH-HHHHcCCCEEEECCCCCCCCCCC--
Confidence 323344444444445799999999997521 11 121 1122 23345789999999987542111
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 459 KDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 459 ~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
.....++++.++.+++.++||++|+|+..
T Consensus 239 ~~~~~~~~~~l~~~~~~~i~w~~W~~~~~ 267 (303)
T 7a3h_A 239 GVFLDEAQVWIDFMDERNLSWANWSLTHK 267 (303)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEEESCC
T ss_pred cccHHHHHHHHHHHHhcCCceEEEEecCC
Confidence 11235567778888899999999999984
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=293.74 Aligned_cols=257 Identities=16% Similarity=0.166 Sum_probs=183.6
Q ss_pred Hhhcc-ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 219 KRHRN-TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 219 ~~hw~-t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
+.||. ++++++||+.||++|+|+|||||.|+...++.++..++++.+++||++|++|+++||+||||+|+.. .++
T Consensus 62 ~~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~-~~~--- 137 (395)
T 2jep_A 62 ETAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDG-YNS--- 137 (395)
T ss_dssp TTTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGG-CTT---
T ss_pred ccccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcc-ccC---
Confidence 46785 6899999999999999999999999766666555567778999999999999999999999999872 111
Q ss_pred CCCCCCCCCCCC--C----hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC---C---cccHHHHHHHHHHHHH
Q 009560 298 HSASRDGTTDWP--A----SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV---P---LDILVPYYKQGYQIVR 365 (532)
Q Consensus 298 ~sg~~~g~~~W~--~----~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~---~---~~~l~~~~~~~~~aIR 365 (532)
+ ...|. + +..++++.++|++|++||+++|.+++|||+|||..... . .+.+.+++++++++||
T Consensus 138 -~-----~g~w~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR 211 (395)
T 2jep_A 138 -V-----QGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVR 211 (395)
T ss_dssp -S-----TTCCCCTTCSCHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -C-----CCccccCCcccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 0 11233 2 34688999999999999999999999999999986421 1 2478999999999999
Q ss_pred hhC---CCcEEEEeCCCCCCCch--h-hhhcc----------CCCCcEEEEeeecccCCCcc---------cc--CChh-
Q 009560 366 KYS---PTAYVIVCQRIGNADPL--E-LYQAN----------IGLHNIVVDLHYYNLFDTFF---------VN--MSTV- 417 (532)
Q Consensus 366 ~~~---~~~~Viv~~~~~~~~~~--~-~~~~~----------~~~~nvv~s~H~Y~~f~~~~---------~~--~~~~- 417 (532)
+++ |+++|++++...+.+.. . -+..| ...+|+||++|+|.++.... .. ..+.
T Consensus 212 ~~~~~np~~~I~v~g~~~~~~~~~~~~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~~ 291 (395)
T 2jep_A 212 QTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAK 291 (395)
T ss_dssp TSSGGGGTSCEEEECGGGCHHHHHSSSSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGGG
T ss_pred HhCCCCCCcEEEECCCccCcccccccccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCccc
Confidence 995 57899997522111110 0 01111 13489999999999853211 00 0010
Q ss_pred ---hhH-HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC--CCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 418 ---DNI-LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS--GTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 418 ---~~i-~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~--a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+.. +.+...+.. +..+....+.||+|||||+...... .+.+...+|++.+++.+++.++||+||+++.
T Consensus 292 ~~~~~~~~~i~~~~~~-~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~W~~~~ 365 (395)
T 2jep_A 292 KSTWGQEDYLESQFKS-MYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGH 365 (395)
T ss_dssp BCSSCSHHHHHHHHHH-HHHHTGGGTCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHHTTCEEEEEECSC
T ss_pred ccccCcHHHHHHHHHH-HHHHHHHcCCCEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 111 233333332 2223344578999999998754321 1234567899999999999999999999986
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-32 Score=298.36 Aligned_cols=253 Identities=18% Similarity=0.311 Sum_probs=185.3
Q ss_pred ccCCHHHH-HHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC-------CCCCC--
Q 009560 224 TFITIEDF-NFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA-------APGSQ-- 293 (532)
Q Consensus 224 t~ite~d~-~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~-------~pGsq-- 293 (532)
.+++++|| +.||++|||+||||+.|+.+ +|.+ +.|+.+.+++|+++|++|+++||+||||+|+ .||+|
T Consensus 64 ~~~~~~di~~~l~~~G~N~VRl~v~w~~~-~p~~-g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ 141 (481)
T 2osx_A 64 PQFTEADLAREYADMGTNFVRFLISWRSV-EPAP-GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSG 141 (481)
T ss_dssp CSCCHHHHHHHHHHHCCCEEEEEECHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSB
T ss_pred ccccHHHHHHHHHHCCCCEEEEeCcHHHc-CCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccc
Confidence 56789999 99999999999999997644 5554 4788899999999999999999999999998 78887
Q ss_pred CCCCCCCCCCCCCCC------------------------------------CChhhHHHHHHHHHHHHHHhCCCCcEEEE
Q 009560 294 NGMEHSASRDGTTDW------------------------------------PASDYISQTLDVIDFLASRYAKHPALLGI 337 (532)
Q Consensus 294 n~~~~sg~~~g~~~W------------------------------------~~~~~~~~~~~~w~~la~ry~~~p~v~g~ 337 (532)
|+++..| .+.+.| .++..++++.++|++|++||+++|.|++|
T Consensus 142 ng~~~gg--~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~ 219 (481)
T 2osx_A 142 NGAGAIG--NGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAY 219 (481)
T ss_dssp TTBCSSS--BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cccccCC--CCCccceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4555222 122223 23567899999999999999999999999
Q ss_pred EeccCCCCCCC-----CcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCc---hhhhhcc---CCCCcEEEEeeeccc
Q 009560 338 ELLNEPSAATV-----PLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADP---LELYQAN---IGLHNIVVDLHYYNL 406 (532)
Q Consensus 338 EL~NEP~~~~~-----~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~---~~~~~~~---~~~~nvv~s~H~Y~~ 406 (532)
||+|||..... +.+.+.+++++++++||+++|+++|++++...+.+. ..+..+. ...+|+|+++|+|.+
T Consensus 220 el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~dp~~~I~v~~~~~~~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~~ 299 (481)
T 2osx_A 220 DLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPL 299 (481)
T ss_dssp ECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTTCSSSEEEECCCSTTGGGTCCCCCCCCCCCSSSSCCEEECCBCCCH
T ss_pred EeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCcccccccCCCCCCcccCCCcccCCCEEEEEEecCc
Confidence 99999987531 246789999999999999999999999864211111 1121211 124689999999987
Q ss_pred C---CCccccCChhhhHHHHHHHHHHHHHHHHhcC-CCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 009560 407 F---DTFFVNMSTVDNILFIYKSREAQLQALNNAN-GPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYW 482 (532)
Q Consensus 407 f---~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~-g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW 482 (532)
+ ..++...........+.. +.+.+..+.++. +.||+|||||...+. +...+|++++++.+++.++||+||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~Pv~igEfG~~~~~-----~~~~~~~~~~~~~~~~~~ig~~~W 373 (481)
T 2osx_A 300 PLDIGDGHEGLARTLTDVTIDA-WRANTAHTARVLGDVPIILGSFGLDTTL-----PGARDYIERVYGTAREMGAGVSYW 373 (481)
T ss_dssp HHHHTTSSSHHHHHHHHHHHHH-HHHHHHHHHHHTTSCCBEECBCCCCTTS-----TTHHHHHHHHHHHHHHHTCEEEES
T ss_pred ccccCCccCccchhhHHHHHHH-HHHHHHHHHHHhcCCCEEEeccCCCCCc-----hHHHHHHHHHHHHHHHcCCCeEEE
Confidence 4 112221111111122322 223344555555 899999999964321 235678889999999899999999
Q ss_pred cccC
Q 009560 483 TLKN 486 (532)
Q Consensus 483 ~~k~ 486 (532)
+++.
T Consensus 374 ~~~~ 377 (481)
T 2osx_A 374 SSDP 377 (481)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9986
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-32 Score=280.08 Aligned_cols=227 Identities=19% Similarity=0.294 Sum_probs=171.1
Q ss_pred hccccCCHHHHHHH-HHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFL-YRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~ite~d~~~l-a~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
++..+++++||+.| +++|+|+||||+.+. .++...++..++.||++|++|.++||+||||+|..+|+++
T Consensus 64 ~~~~~~~~~~~~~l~~~~G~N~VRi~~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~----- 133 (327)
T 3pzt_A 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTA-----DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP----- 133 (327)
T ss_dssp HHGGGCSHHHHHHHHHHTCCSEEEEEEESS-----TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST-----
T ss_pred hcCCCCCHHHHHHHHHhcCCCEEEEEeEEC-----CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc-----
Confidence 45668899999999 589999999999541 1222335678999999999999999999999999876321
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
....+++.++|+.|++|||++|+|+ |||+|||.....-.+.+.+++++++++||+++|+++|++++..
T Consensus 134 -----------~~~~~~~~~~w~~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~ 201 (327)
T 3pzt_A 134 -----------NQNKEKAKEFFKEMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGT 201 (327)
T ss_dssp -----------TTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHH
T ss_pred -----------hHHHHHHHHHHHHHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 2357789999999999999999999 9999999864222358999999999999999999999998643
Q ss_pred CCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHH
Q 009560 380 GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459 (532)
Q Consensus 380 ~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~ 459 (532)
++.+...+...+..++|++|++|+|.... .+ .+.+ .+ .+...++.|+||||||........ .
T Consensus 202 w~~~~~~~~~~~~~~~n~v~s~H~Y~~~~--------~~---~~~~----~~-~~~~~~g~Pv~igEfG~~~~~g~g--~ 263 (327)
T 3pzt_A 202 WSQDVNDAADDQLKDANVMYALHFYAGTH--------GQ---FLRD----KA-NYALSKGAPIFVTEWGTSDASGNG--G 263 (327)
T ss_dssp HHTCHHHHHTSCCCCTTEEEEEEEETTTC--------CH---HHHH----HH-HHHHHTTCCEEEEEEESSCTTSCS--C
T ss_pred ccccchhhhhCCCCCCCeEEEEEecCCCc--------hH---HHHH----HH-HHHHHcCCcEEEEccCCCCCCCCC--c
Confidence 23344444444456789999999997521 11 1111 11 223446789999999987542111 1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 460 DYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 460 ~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
.+..++++.++.+++.++||++|+|++.
T Consensus 264 ~~~~~~~~~l~~~~~~~i~w~~W~~~d~ 291 (327)
T 3pzt_A 264 VFLDQSREWLKYLDSKTISWVNWNLSDK 291 (327)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESCC
T ss_pred ccHHHHHHHHHHHHHcCCeeEEEEecCC
Confidence 2345677788888899999999999974
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-32 Score=285.48 Aligned_cols=235 Identities=21% Similarity=0.293 Sum_probs=165.3
Q ss_pred cccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCC
Q 009560 223 NTFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSA 300 (532)
Q Consensus 223 ~t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg 300 (532)
..+++++||+.|+ ++|+|+||||+.|- .++.++++..+++||++|++|.++||+||||+|+. ||+++.
T Consensus 51 ~~~~~~~d~~~l~~~~G~N~VRip~~~~-----~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~~~----- 120 (364)
T 1g01_A 51 GEIVNENAFVALSNDWGSNMIRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA----- 120 (364)
T ss_dssp GGGCSHHHHHHHHTTSCCSEEEEEEESS-----SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS-----
T ss_pred CCccCHHHHHHHHHHCCCCEEEEEeeeC-----CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCh-----
Confidence 3468899999996 99999999999861 23345678899999999999999999999999984 564431
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhC---CCCcEEEEEeccCCCCCC-----C-----CcccHHHHHHHHHHHHHhh
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYA---KHPALLGIELLNEPSAAT-----V-----PLDILVPYYKQGYQIVRKY 367 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~---~~p~v~g~EL~NEP~~~~-----~-----~~~~l~~~~~~~~~aIR~~ 367 (532)
...+++.++|++|++||+ ++|.|+ |||+|||.... . ..+.+.+++++++++||++
T Consensus 121 -----------~~~~~~~~~w~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~ 188 (364)
T 1g01_A 121 -----------DVYSGAYDFFEEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREK 188 (364)
T ss_dssp -----------GGGTTHHHHHHHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHHHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 122458899999999999 678997 99999998631 1 1235688999999999999
Q ss_pred CCCcEEEEeCCCCCCCchhhhhccCCCCcEEEEeeecccCCCc----cccCChhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 009560 368 SPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTF----FVNMSTVDNILFIYKSREAQLQALNNANGPLVF 443 (532)
Q Consensus 368 ~~~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~ 443 (532)
+ +++|++++..++.+.......+..++|+||++|+|.+++.. +.....++..+.+. +.+.. ....+.|||
T Consensus 189 ~-~~~I~v~~~~w~~~~~~~~~~p~~~~niv~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~g~Pv~ 262 (364)
T 1g01_A 189 G-DNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVM----ANVRY-ALDNGVAVF 262 (364)
T ss_dssp C-CCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHH----HHHHH-HHHTTCCEE
T ss_pred C-CcEEEECCCCcccccchhhcCCCCCCCEEEEEEecCCccCCCCCCCCCCchHHHHHHHH----HHHHH-HHHCCCeEE
Confidence 9 99999975321233222222234568999999999986432 11101111111121 11222 234578999
Q ss_pred EeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 444 IGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 444 vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
|||||+........ ....+++++++.+++.++||++|+|+..
T Consensus 263 igEfG~~~~~~~~~--~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 304 (364)
T 1g01_A 263 ATEWGTSQANGDGG--PYFDEADVWLNFLNKHNISWANWSLTNK 304 (364)
T ss_dssp EEEEESSBTTTBSC--CCHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred EEccccccCCCCCC--cCHHHHHHHHHHHHHCCCceEEEeCCCC
Confidence 99999865321111 1134556677888999999999999975
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=269.97 Aligned_cols=217 Identities=20% Similarity=0.278 Sum_probs=160.5
Q ss_pred ccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCC----cChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFI----GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 224 t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~----~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
.+++++||+.|| ++|+|+||||+.|. +..+ .|. ++.+++||++|++|.++||+||||+|..++
T Consensus 37 ~~~~~~di~~~~~~~G~N~vRi~~~~~----~~~~-~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~~------- 104 (293)
T 1tvn_A 37 KFYTAETVAKAKTEFNATLIRAAIGHG----TSTG-GSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA------- 104 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECC----TTST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-------
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecccc----CCCC-CccccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc-------
Confidence 467899999999 59999999999873 2222 333 468999999999999999999999998653
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC-
Q 009560 299 SASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ- 377 (532)
Q Consensus 299 sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~- 377 (532)
....+++.++|++|++||+++|+|+ |||+|||..... .+.+.+++++++++||+++|+++|++++
T Consensus 105 ------------~~~~~~~~~~~~~~a~r~~~~p~V~-~el~NEP~~~~~-~~~~~~~~~~~~~~IR~~d~~~~i~v~~~ 170 (293)
T 1tvn_A 105 ------------HTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQISW-VNDIKPYAETVIDKIRAIDPDNLIVVGTP 170 (293)
T ss_dssp ------------GGCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCCT-TTTHHHHHHHHHHHHHTTCCSCEEEECCH
T ss_pred ------------cccHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCCCch-HHHHHHHHHHHHHHHHhhCCCCEEEECCC
Confidence 1347889999999999999999998 999999986421 2579999999999999999999999975
Q ss_pred CCCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC--C
Q 009560 378 RIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT--S 455 (532)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~--~ 455 (532)
.|. .+.......+..++|++|++|+|.+.. ++ .+.. .+. .....+.|++|||||+..... +
T Consensus 171 ~~~-~~~~~~~~~p~~~~n~v~s~H~Y~~~~--------~~---~~~~----~~~-~~~~~~~Pv~igEfG~~~~~~~g~ 233 (293)
T 1tvn_A 171 TWS-QDVDVASQNPIDRANIAYTLHFYAGTH--------GQ---SYRN----KAQ-TALDNGIALFATEWGTVNADGNGG 233 (293)
T ss_dssp HHH-TCHHHHHHSCCCSSSEEEEEEEETTTC--------CH---HHHH----HHH-HHHHTTCCEEEEEEESSCTTSCSC
T ss_pred Ccc-cccchhccCCCCCCCEEEEEEeCCCCc--------hH---HHHH----HHH-HHHHCCCcEEEEcccCcCCCCCCC
Confidence 232 232222122334589999999998721 11 1111 111 223457899999999865321 1
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 456 GTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 456 a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
.+.+.. +++++.+++.++||++|+|+..
T Consensus 234 ~~~~~~----~~~~~~~~~~~~g~~~W~~~~~ 261 (293)
T 1tvn_A 234 VNINET----DAWMAFFKTNNISHANWALNDK 261 (293)
T ss_dssp CCHHHH----HHHHHHHHHHTCCEEEEEESCS
T ss_pred CCHHHH----HHHHHHHHHCCCeeEEEecCCC
Confidence 233333 3444567778899999999974
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-31 Score=270.27 Aligned_cols=222 Identities=17% Similarity=0.239 Sum_probs=164.0
Q ss_pred HHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDW 308 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W 308 (532)
+||+.||++|+|+||||+.+.. .+....+++||++|++|.++||+||||+|..+|.++.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~--------~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~------------- 94 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGV--------RWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ------------- 94 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSS--------SSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS-------------
T ss_pred HHHHHHHHcCCCEEEEEccCCc--------ccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCC-------------
Confidence 8999999999999999997421 1222358999999999999999999999998876542
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC-cccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCch--
Q 009560 309 PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP-LDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPL-- 385 (532)
Q Consensus 309 ~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~-~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~-- 385 (532)
.++...+++.++|++|++|||++|.+++|||+|||.....+ .+.|.+++++++++||+++|+++|++++..++.+..
T Consensus 95 ~~~~~~~~~~~~w~~ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~ 174 (302)
T 1bqc_A 95 SGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNT 174 (302)
T ss_dssp TTCCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCH
T ss_pred CchhhHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhh
Confidence 12356889999999999999999999999999999864211 135899999999999999999999998643333332
Q ss_pred ------hhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHH
Q 009560 386 ------ELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459 (532)
Q Consensus 386 ------~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~ 459 (532)
.+.. ....+|++|++|+|.+++. .+ .+.. .+..+.+ .+.|++|||||+........
T Consensus 175 ~~~~~~~~~~-~~~~~~~v~s~H~Y~~~~~------~~----~~~~----~~~~~~~-~~~Pv~igEfG~~~~~~~~~-- 236 (302)
T 1bqc_A 175 MRNNADQVYA-SDPTGNTVFSIHMYGVYSQ------AS----TITS----YLEHFVN-AGLPLIIGEFGHDHSDGNPD-- 236 (302)
T ss_dssp HHHHHHHHHH-TCTTCCEEEEEEESGGGCS------HH----HHHH----HHHHHHH-HTCCEEEEEECCTTSTTCCC--
T ss_pred hhccchhccc-cCCCCCEEEEEEEccCCCC------HH----HHHH----HHHHHHH-CCCCEEEEeecCCCCCCchH--
Confidence 2222 2356799999999998542 11 1211 1222222 46899999999875432211
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchH
Q 009560 460 DYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFE 494 (532)
Q Consensus 460 ~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~ 494 (532)
+++.++.+++.++||++|+|+.....+++-
T Consensus 237 -----~~~~~~~~~~~~i~~~~W~~~~~~~~~~~~ 266 (302)
T 1bqc_A 237 -----EDTIMAEAERLKLGYIGWSWSGNGGGVEYL 266 (302)
T ss_dssp -----HHHHHHHHHHHTCEEEESCSSCCCTTTGGG
T ss_pred -----HHHHHHHHHHcCCEEEEeeccCCCCCcccc
Confidence 455667777889999999999875555543
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-31 Score=267.29 Aligned_cols=213 Identities=15% Similarity=0.208 Sum_probs=160.7
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
+++||+.||++|+|+||||+.. +.+|.++.+++||++|++|.++||+||||+|..+|.++
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~------------ 92 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS------------ 92 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC------------
T ss_pred hHHHHHHHHHcCCCEEEEEecC--------CCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc------------
Confidence 6899999999999999999962 12456678999999999999999999999999876432
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCch-
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPL- 385 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~- 385 (532)
....+++.++|++|++||++++..++|||+|||... .+...|.+++++++++||+++|+++|++++..++....
T Consensus 93 ----~~~~~~~~~~w~~ia~~y~~~~~~v~~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~ 167 (294)
T 2whl_A 93 ----RSDLNRAVDYWIEMKDALIGKEDTVIINIANEWYGS-WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQS 167 (294)
T ss_dssp ----HHHHHHHHHHHHHTHHHHTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHH
T ss_pred ----chhHHHHHHHHHHHHHHHcCCCCeEEEEecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCchh
Confidence 267889999999999999998444469999999863 34557889999999999999999999998632222221
Q ss_pred ------hhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHH
Q 009560 386 ------ELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459 (532)
Q Consensus 386 ------~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~ 459 (532)
.++. .++.+|++|++|+|.++.. .++ .+.. .+..+ ...+.|++|||||+... ..
T Consensus 168 ~~~~~~~~~~-~d~~~n~v~s~H~Y~~~~~------~~~---~~~~----~~~~~-~~~~~Pv~igEfG~~~~--~~--- 227 (294)
T 2whl_A 168 IHDYGQDVFN-ADPLKNTMFSIHMYEYAGG------DAN---TVRS----NIDRV-IDQDLALVIGEFGHRHT--DV--- 227 (294)
T ss_dssp HHHHHHHHHH-TCTTCCEEEEEEESTTTTS------SHH---HHHH----HHHHH-HTTTCCEEEEEECCCCC--CC---
T ss_pred hhhhhhcccc-CCCcCCEEEEEEeccCCCC------cHH---HHHH----HHHHH-HHCCCCEEEEccCCCCC--Cc---
Confidence 1221 1345799999999976432 111 1211 22222 34578999999998754 11
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEcccCCC
Q 009560 460 DYQDFGSAQLEVYNAASFGWAYWTLKNDR 488 (532)
Q Consensus 460 ~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~ 488 (532)
+++++++.+++.++||++|+|+...
T Consensus 228 ----~~~~~~~~~~~~~i~w~~W~~~~~~ 252 (294)
T 2whl_A 228 ----DEDTILSYSEETGTGWLAWSWKGNS 252 (294)
T ss_dssp ----CHHHHHHHHHHHTCEEEESCSSCCC
T ss_pred ----cHHHHHHHHHHcCCeEEEEEecCCC
Confidence 2466777788889999999999863
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-31 Score=265.43 Aligned_cols=218 Identities=20% Similarity=0.262 Sum_probs=160.7
Q ss_pred ccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCc-ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIG-GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSAS 301 (532)
Q Consensus 224 t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~-~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~ 301 (532)
.+++++||+.|| ++|+|+||||+.|. +. .+...++ ..+++||++|++|.++||+||||+|..++
T Consensus 37 ~~~~~~d~~~l~~~~G~N~vR~~~~~~---~~-~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~---------- 102 (291)
T 1egz_A 37 KFYTADTVASLKKDWKSSIVRAAMGVQ---ES-GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA---------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECS---ST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG----------
T ss_pred ccCCHHHHHHHHHHcCCCEEEEecccc---cc-CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc----------
Confidence 467899999999 89999999999873 11 1111232 47999999999999999999999998542
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC-CC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR-IG 380 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~-~~ 380 (532)
+...+++.++|++|++||+++|+|+ |||+|||.... ..+.+.+++++++++||+.+|+++|++++. |+
T Consensus 103 ---------~~~~~~~~~~~~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~ 171 (291)
T 1egz_A 103 ---------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWS 171 (291)
T ss_dssp ---------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHH
T ss_pred ---------chhHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCcc
Confidence 3568899999999999999999998 99999998642 125799999999999999999999999753 32
Q ss_pred CCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC--CCCH
Q 009560 381 NADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT--SGTQ 458 (532)
Q Consensus 381 ~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~--~a~~ 458 (532)
.+.......+..++|++|++|+|.+.+ ++ .+.. .+. .....+.|++|||||+..... ..+.
T Consensus 172 -~~~~~~~~~p~~~~~~~~s~H~Y~~~~--------~~---~~~~----~~~-~~~~~~~Pv~igEfG~~~~~~~g~~~~ 234 (291)
T 1egz_A 172 -QNVDEASRDPINAKNIAYTLHFYAGTH--------GE---SLRN----KAR-QALNNGIALFVTEWGTVNADGNGGVNQ 234 (291)
T ss_dssp -TCHHHHHTSCCCSSSEEEEEEEETTTC--------CH---HHHH----HHH-HHHHTTCCEEEEEEESSCTTSCSCCCH
T ss_pred -cccchhhcCCCCCCCEEEEEEecCCCC--------hH---HHHH----HHH-HHHHCCCcEEEecccCcCCCCCCCcCH
Confidence 232222222334579999999998621 11 1111 122 223457899999999865321 1233
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 459 KDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 459 ~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
+ +.+++++.+++.++||++|+|+..
T Consensus 235 ~----~~~~~~~~~~~~~~g~~~W~~~~~ 259 (291)
T 1egz_A 235 T----ETDAWVTFMRDNNISNANWALNDK 259 (291)
T ss_dssp H----HHHHHHHHHHHTTCCEEEEEECCS
T ss_pred H----HHHHHHHHHHHCCCeEEEEecCCC
Confidence 3 334455677888999999999974
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=271.30 Aligned_cols=220 Identities=15% Similarity=0.205 Sum_probs=164.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||||+.. +.+|.+..++.||++|++|.++||+||||+|..+|++
T Consensus 57 ~~~i~~lk~~G~N~VRip~~~--------~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~-------------- 114 (345)
T 3jug_A 57 STAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRD-------------- 114 (345)
T ss_dssp HHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCC--------------
T ss_pred HHHHHHHHHcCCCEEEEEecC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCC--------------
Confidence 579999999999999999851 2366777899999999999999999999999986532
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCC-CcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKH-PALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLE 386 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~-p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~ 386 (532)
.....+++.++|++|++|||++ +.| .|||+|||.. ..+...|.+++++++++||+++|+++|++++..++.+...
T Consensus 115 --~~~~~~~~~~~w~~iA~ryk~~~~~V-i~el~NEP~~-~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~~~~ 190 (345)
T 3jug_A 115 --SRSDLDRAVDYWIEMKDALIGKEDTV-IINIANEWYG-SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQS 190 (345)
T ss_dssp --CHHHHHHHHHHHHHTHHHHTTCTTTE-EEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHH
T ss_pred --cHHHHHHHHHHHHHHHHHHcCCCCeE-EEEecCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccccchh
Confidence 1356899999999999999999 555 5999999987 2345678999999999999999999999986433334322
Q ss_pred -------hhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHH
Q 009560 387 -------LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459 (532)
Q Consensus 387 -------~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~ 459 (532)
++. .++++|+||++|+|.... .+.+ .+. +.+.. ...++.|+||||||+.......
T Consensus 191 ~~~~~~~~~~-~dp~~nlvys~H~Y~~~g-----~~~~----~~~----~~~~~-~~~~g~Pv~igEfG~~~~~~~~--- 252 (345)
T 3jug_A 191 IHDYGQDVFN-ADPLKNTIFSIHMYEYAG-----GDAN----TVR----SNIDR-VIDQDLALVIGEFGHRHTDGDV--- 252 (345)
T ss_dssp HHHHHHHHHH-TCTTCCEEEEEEESTTTT-----SSHH----HHH----HHHHH-HHTTTCCEEEEEECCCCCC--C---
T ss_pred hccchhhhcc-cCCccceEEEEEecCCCC-----CCHH----HHH----HHHHH-HHHcCCcEEEECcCCCCCCCCH---
Confidence 122 245789999999995321 1121 111 22222 3356789999999987542111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchHh
Q 009560 460 DYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEW 495 (532)
Q Consensus 460 ~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~~ 495 (532)
+++++++.+++.+++|++|+|+..+..|++-.
T Consensus 253 ----~~~~~l~~~~~~~i~w~~W~~~~~~~~~~~l~ 284 (345)
T 3jug_A 253 ----DEDTILSYSEETGTGWLAWSWKGNSAEWDYLD 284 (345)
T ss_dssp ----CHHHHHHHHHHHTCEEEESCSSCCCGGGGGGC
T ss_pred ----HHHHHHHHHHHcCCEEEEEEEECCCCCccccc
Confidence 24677788888999999999998654444433
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=279.29 Aligned_cols=219 Identities=16% Similarity=0.194 Sum_probs=163.7
Q ss_pred ccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 009560 222 RNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSAS 301 (532)
Q Consensus 222 w~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~ 301 (532)
|....+++||+.||++|+|+||||+.. +.+|.++.+++||++|++|.++||+||||+|..+|.++
T Consensus 36 W~~~~~~~di~~ik~~G~N~VRipv~~--------g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~------- 100 (464)
T 1wky_A 36 WYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS------- 100 (464)
T ss_dssp GCGGGHHHHHHHHHTTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC-------
T ss_pred cCCcchHHHHHHHHHCCCCEEEEEcCC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC-------
Confidence 444457899999999999999999962 23556678999999999999999999999999875332
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN 381 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~ 381 (532)
+...+++.++|++||+||++++..++|||+|||... .+.+.|.+++++++++||+++|+++|++++..++
T Consensus 101 ---------~~~~~~~~~~w~~iA~ryk~~~~~Vi~eL~NEP~~~-~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~ 170 (464)
T 1wky_A 101 ---------IASLNRAVDYWIEMRSALIGKEDTVIINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWG 170 (464)
T ss_dssp ---------HHHHHHHHHHHHHTGGGTTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTT
T ss_pred ---------hHHHHHHHHHHHHHHHHHcCCCCeEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcC
Confidence 367889999999999999999544479999999863 4556789999999999999999999999864222
Q ss_pred CCch-------hhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC
Q 009560 382 ADPL-------ELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT 454 (532)
Q Consensus 382 ~~~~-------~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~ 454 (532)
.... .++. .++.+|+||++|+|.++.. . . +.+.. .+..+ ...+.|++|||||+.....
T Consensus 171 ~~~~~~~~~~~~l~~-~dp~~niv~s~H~Y~~~g~-----~-~---~~i~~----~~~~~-~~~g~Pv~igEfG~~~~~~ 235 (464)
T 1wky_A 171 QFPQSIHDYGREVFN-ADPQRNTMFSIHMYEYAGG-----N-A---SQVRT----NIDRV-LNQDLALVIGEFGHRHTNG 235 (464)
T ss_dssp TBTHHHHHHHHHHHH-TCTTCCEEEEEEESTTTSS-----S-H---HHHHH----HHHHH-HTTTCCEEEEEECSEETTE
T ss_pred cccccccccchhccc-cCCCCCEEEEEEEECCCCC-----C-H---HHHHH----HHHHH-HHcCCCEEEECccCCCCCC
Confidence 2221 2221 1346799999999986431 1 1 12222 22222 2457899999999875321
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 455 SGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
... .+++++.+++.++||++|+|+..
T Consensus 236 ~~~-------~~~~~~~~~~~~igw~~W~~~~~ 261 (464)
T 1wky_A 236 DVD-------ESTIMSYSEQRGVGWLAWSWKGN 261 (464)
T ss_dssp ECC-------HHHHHHHHHHTTCEEEESCSSCC
T ss_pred cHH-------HHHHHHHHHHcCCeEEEEEEcCC
Confidence 111 25666778889999999999975
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=265.12 Aligned_cols=218 Identities=17% Similarity=0.289 Sum_probs=159.1
Q ss_pred ccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcC-hHHHHHHHHHHHHHcCCEEEEEcCCCC-CCCCCCCCCC
Q 009560 224 TFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGG-SLEALDNALSWAEAYNIKCIIDLHAAP-GSQNGMEHSA 300 (532)
Q Consensus 224 t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~-~l~~Ld~~v~~a~k~Gi~VILDlH~~p-Gsqn~~~~sg 300 (532)
.+++++||+.|+ ++|+|+||||+.|. + .+.+.++. .+++||++|++|.++||+||||+|..+ |++
T Consensus 41 ~~~~~~d~~~l~~~~G~N~vRi~~~~~---~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g~~------- 108 (306)
T 2cks_A 41 HCLTDSSLDALAYDWKADIIRLSMYIQ---E--DGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGDP------- 108 (306)
T ss_dssp GGCSHHHHHHHHHTSCCSEEEEEEESS---T--TSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCCG-------
T ss_pred cCCCHHHHHHHHHHcCCCEEEEEeeec---C--CCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCc-------
Confidence 357899999986 58999999999863 1 12233443 789999999999999999999999874 211
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC-C
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR-I 379 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~-~ 379 (532)
..+.+++.++|++|++||+++|+|+ |||+|||... +...+.+++++++++||+++|+++|++++. |
T Consensus 109 ----------~~~~~~~~~~~~~ia~~y~~~~~V~-~el~NEP~~~--~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~ 175 (306)
T 2cks_A 109 ----------HYNLDRAKTFFAEIAQRHASKTNVL-YEIANEPNGV--SWASIKSYAEEVIPVIRQRDPDSVIIVGTRGW 175 (306)
T ss_dssp ----------GGGHHHHHHHHHHHHHHHTTCSSEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHHCTTCCEEECCHHH
T ss_pred ----------ccCHHHHHHHHHHHHHHhCCCCcEE-EEcCCCCCCC--CHHHHHHHHHHHHHHHHHhCCCCEEEECCCCc
Confidence 1357889999999999999999998 9999999863 456789999999999999999999999852 2
Q ss_pred CCC------CchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC
Q 009560 380 GNA------DPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV 453 (532)
Q Consensus 380 ~~~------~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~ 453 (532)
... +.......|..++|+||++|+|.+++. +. +.+ .+.... .+.|++|||||+....
T Consensus 176 ~~~~~~~~~~~~~~~~~p~~~~~~v~s~H~Y~~~~~-------~~----~~~----~~~~~~--~~~Pv~igEfG~~~~~ 238 (306)
T 2cks_A 176 SSLGVSEGSGPAEIAANPVNASNIMYAFHFYAASHR-------DN----YLN----ALREAS--ELFPVFVTEFGTETYT 238 (306)
T ss_dssp HSTTGGGTCCTHHHHHSCCSCSSEEEEEEEETTTCC-------HH----HHH----HHHHHH--HHSCEEEEEEESSCTT
T ss_pred cccccccccchhhhhcCCCCcCCeEEEEeeCCCCcc-------HH----HHH----HHHHHh--cCCcEEEEcccCCcCC
Confidence 211 222223333346799999999988431 11 111 122122 2578999999986531
Q ss_pred --CCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 454 --TSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 454 --~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
...+.+ +.++.++.+++.++||++|+|+..
T Consensus 239 g~~~~~~~----~~~~~~~~~~~~~ig~~~W~~~~~ 270 (306)
T 2cks_A 239 GDGANDFQ----MADRYIDLMAERKIGWTKWNYSDD 270 (306)
T ss_dssp SCSCCCHH----HHHHHHHHHHHHTCCEEEECCSCC
T ss_pred CCCCcCHH----HHHHHHHHHHHcCCCeEEEecCCC
Confidence 112333 344455677788899999999974
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=277.44 Aligned_cols=232 Identities=20% Similarity=0.253 Sum_probs=171.7
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
.++||+.||++|+|+||||+.|+.+.. . ..+..++.||++|++|.++||+||||+|..+|.++ .
T Consensus 87 ~~~di~~ik~~G~N~VRi~~~~~~~~~-~----~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~-----------~ 150 (359)
T 4hty_A 87 SKKHFEVIRSWGANVVRVPVHPRAWKE-R----GVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKS-----------E 150 (359)
T ss_dssp SHHHHHHHHHTTCSEEEEEECHHHHHH-H----HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTT-----------T
T ss_pred CHHHHHHHHhcCCCEEEEeccHHHhhc-c----CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCc-----------c
Confidence 489999999999999999998865422 1 13458999999999999999999999999876432 1
Q ss_pred CCCChh---hHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-----CCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 307 DWPASD---YISQTLDVIDFLASRYAKHPALLGIELLNEPSAA-----TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 307 ~W~~~~---~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~-----~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
.|.++. .++++.++|++|++|||++|+|++|||+|||... ..+.+.+.+++++++++||+.+|+++|++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~ 230 (359)
T 4hty_A 151 MFQNNSYHTTKGETFDFWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGF 230 (359)
T ss_dssp EESSGGGCCCHHHHHHHHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECH
T ss_pred cccCCcchhHHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCc
Confidence 344443 5899999999999999999999999999999863 23457899999999999999999999999864
Q ss_pred CCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC-CC-
Q 009560 379 IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT-SG- 456 (532)
Q Consensus 379 ~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~-~a- 456 (532)
.++.+...+...+..++|++|++|+|.++... +. ...+.+.+..+. .+.||||||||...... +.
T Consensus 231 ~w~~~~~~~~~~p~~~~n~~ys~H~Y~~~~~~----~~-------~~~~~~~~~~~~--~~~Pv~vtEfG~~~~~g~g~~ 297 (359)
T 4hty_A 231 NWAYDLKEAAANPIDRQNIAYVSHPYPQKVGA----PY-------QANWERDFGFMA--DKYPVFATEIGYQRATDKGAH 297 (359)
T ss_dssp HHHTCCHHHHHSCCSSSSEEEECCCCTTSSCS----SH-------HHHHHHHTGGGG--GTSCEEEEEECCBCTTSTTCC
T ss_pred ccccccchhhcCCCCCCCEEEEEEeCCCCCCc----ch-------HHHHHHHHHHHh--cCCCEEEecccCCCCCCCCcc
Confidence 32334444444444578999999999874311 11 112222222232 36899999999865321 11
Q ss_pred -CHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 457 -TQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 457 -~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
+.....+|+++.++.+++.++||++|+|.++
T Consensus 298 ~~~~~~~~y~~~~~~~~~~~~i~~~~Ws~~~~ 329 (359)
T 4hty_A 298 IPVIDDGSYGPRITDYFNSKGISWVAWVFDPD 329 (359)
T ss_dssp TTSBCCSTHHHHHHHHHHHHTCEEEEEEESSS
T ss_pred cccccHHHHHHHHHHHHHHcCCeEEEEEeCCC
Confidence 0011234666666777788999999999985
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=270.43 Aligned_cols=224 Identities=18% Similarity=0.222 Sum_probs=156.7
Q ss_pred hccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCc-ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG-GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~-~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
||.+|++++||+.||++|||+||||+.||...-+.++ ..++ ..+++||++|++|.++||+||||+|.. .++
T Consensus 35 ~w~~~~~~~d~~~i~~~G~N~VRipv~~~~~~~~~~~-~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~--~~~----- 106 (491)
T 2y8k_A 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPG-SKAPGYAVNEIDKIVERTRELGLYLVITIGNG--ANN----- 106 (491)
T ss_dssp SSSCCCCHHHHGGGGGGTCCEEEEEEEECCTTTTSTT-CCCTTTTHHHHHHHHHHHHHHTCEEEEEEECT--TCT-----
T ss_pred CcCCCCCHHHHHHHHHcCCCEEEECceeecccccCCC-ccChhHHHHHHHHHHHHHHHCCCEEEEECCCC--CCC-----
Confidence 5777899999999999999999999998752111111 2333 369999999999999999999999972 111
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC-Cc------ccHHHHHHHHHHHHHhhCCCcE
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV-PL------DILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~-~~------~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
+ ..+.++++++|++||+|||++|.|+ |||+|||..... .. +.|.+++++++++||+++|+++
T Consensus 107 --------~--~~~~~~~~~~w~~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~ 175 (491)
T 2y8k_A 107 --------G--NHNAQWARDFWKFYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETP 175 (491)
T ss_dssp --------T--CCCHHHHHHHHHHHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSC
T ss_pred --------c--cccHHHHHHHHHHHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcE
Confidence 0 1247899999999999999999998 999999975211 11 2399999999999999999999
Q ss_pred EEEeCCC-----CC-CC-chhhh--------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhc
Q 009560 373 VIVCQRI-----GN-AD-PLELY--------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNA 437 (532)
Q Consensus 373 Viv~~~~-----~~-~~-~~~~~--------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~ 437 (532)
|++++.. .+ .. ...+. ..+....|+||++|+|.+.. + .++ .+.... .
T Consensus 176 I~v~g~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~n~v~s~H~Y~~~~---------~----~~~----~l~~~~-~ 237 (491)
T 2y8k_A 176 VLLFSYAVFGGKGGAAEALKDIRAFNKAVFGNENAVWTNEAVAFHGYAGWQ---------E----TTI----AVEELL-K 237 (491)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHHHHHHHHSSTTCCCSSEEEEEESTTCHH---------H----HHH----HHHHHH-H
T ss_pred EEEecccccCCCcccchhhcccccccccccccCCCCCCceeEEEeeCCCCc---------c----cHH----HHHHHH-H
Confidence 9997421 00 00 01111 01124678999999998631 1 111 122222 3
Q ss_pred CCCcEEEeccCccc-CCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 438 NGPLVFIGEWVNEW-NVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 438 ~g~pv~vGEwG~~~-~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
++.||||||||... ...... +..+.++.+++.++||++|+|++.
T Consensus 238 ~g~Pv~igEfG~~~~~~~~~~------~~~~~~~~~~~~~i~w~~W~~~~~ 282 (491)
T 2y8k_A 238 AGYPCFMTEYAGGAWGSGMGG------LDVELTYELERLGVSWLTFQYIPP 282 (491)
T ss_dssp TTCCEEEEECCCC--CCSCSS------CCHHHHHHHHHHTCEEEEEEECTT
T ss_pred cCCCEEEEeecccccCCCCcc------hhHHHHHHHHhcCcceEEEeccCC
Confidence 57899999999753 211111 112334677788999999999864
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=240.32 Aligned_cols=250 Identities=19% Similarity=0.185 Sum_probs=169.4
Q ss_pred HHHHHHHHHcCCCEEEEcccc---------ccccCCCCCCCCC--------cChHHHHHHHHHHHHHcCCEEEEEcCCC-
Q 009560 228 IEDFNFLYRHGINTVRIPVGW---------WIAFDPDPPAPFI--------GGSLEALDNALSWAEAYNIKCIIDLHAA- 289 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w---------w~~~~~~~~~~~~--------~~~l~~Ld~~v~~a~k~Gi~VILDlH~~- 289 (532)
+++|+.||++|+|+||+++.+ |...++.++ .|+ ++.++.||++|++|+++||+|||+||..
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G-~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w 124 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPG-VFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNW 124 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTT-BCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSS
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCCC-cccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 789999999999999998764 344566543 566 7789999999999999999999999963
Q ss_pred --CCCCCCC-CCCCCCCCCCCCCChhhHHHHHHHHHHHHHH--------hCCCCcEEEEEeccCCCCCC-CCcccHHHHH
Q 009560 290 --PGSQNGM-EHSASRDGTTDWPASDYISQTLDVIDFLASR--------YAKHPALLGIELLNEPSAAT-VPLDILVPYY 357 (532)
Q Consensus 290 --pGsqn~~-~~sg~~~g~~~W~~~~~~~~~~~~w~~la~r--------y~~~p~v~g~EL~NEP~~~~-~~~~~l~~~~ 357 (532)
.|+...+ ...+.......|.++..++.+.++|+.|++| |+++|.|++|||.|||.... .+.+.+.+|+
T Consensus 125 ~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~ 204 (383)
T 3pzg_A 125 DDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWV 204 (383)
T ss_dssp STTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHH
T ss_pred cccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHH
Confidence 2211100 0011111223456788999999999999999 99999999999999998743 2346789999
Q ss_pred HHHHHHHHhhCCCcEEEEeC-CCCC-CCc-------hhh----------hhccCCCCcEEEEeeecccCCCccccCChhh
Q 009560 358 KQGYQIVRKYSPTAYVIVCQ-RIGN-ADP-------LEL----------YQANIGLHNIVVDLHYYNLFDTFFVNMSTVD 418 (532)
Q Consensus 358 ~~~~~aIR~~~~~~~Viv~~-~~~~-~~~-------~~~----------~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~ 418 (532)
++++++||+.||+++|+++. ++.. .++ ..+ .....-..=.++++|.|+.. +. .+.+.
T Consensus 205 ~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~---w~-~~~~~ 280 (383)
T 3pzg_A 205 KEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSH---WG-VSPEN 280 (383)
T ss_dssp HHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGGGTBTTTSCCHHHHHTCTTCCSEEEEECHHH---HT-CCGGG
T ss_pred HHHHHHHHhhCCCceEEEcccccccccccccccCCCCccccccccCCChHhhcCCCCCCEEEEEecccc---cC-cChHH
Confidence 99999999999999999874 3321 110 011 11101112247999999841 11 23333
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHH-HHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 419 NILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD-YQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 419 ~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~-~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
..++..+.+.+.++... +.++|++++|||..... ...++. +..++.. +++..+.|++||++...
T Consensus 281 ~~~~~~~wi~~h~~~a~-~~gKPvv~eEfG~~~~~-~~~r~~~~~~~~~~---~~~~~~~g~~~Wq~~~~ 345 (383)
T 3pzg_A 281 YAQWGAKWIEDHIKIAK-EIGKPVVLEEYGIPKSA-PVNRTAIYRLWNDL---VYDLGGDGAMFWMLAGI 345 (383)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTCCEEEEEECCCTTS-SSCHHHHHHHHHHH---HHHTTCCEEEESCBCCB
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCEEEEecCCCCCC-hhHHHHHHHHHHHH---HHHhCCcceEEEEecCc
Confidence 33444444444444333 45889999999986432 223332 3344433 44567899999999874
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.1e-26 Score=235.50 Aligned_cols=256 Identities=12% Similarity=0.143 Sum_probs=167.7
Q ss_pred CHHHHHHHHHcCCCEEEEcccc---ccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCC---CCCCCCC---
Q 009560 227 TIEDFNFLYRHGINTVRIPVGW---WIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAP---GSQNGME--- 297 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~w---w~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~p---Gsqn~~~--- 297 (532)
.++||+.||++|+|+||+++.- |...++.+ +.|+++.++.||++|++|+++||+|||++|+.. |+.+.+.
T Consensus 44 ~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~-g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~ 122 (373)
T 1rh9_A 44 VTNTFQQASKYKMNVARTWAFSHGGSRPLQSAP-GVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWA 122 (373)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCSSSSSCSEEET-TEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECeecCCCCccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHH
Confidence 4899999999999999998631 33334443 367888999999999999999999999999631 2110000
Q ss_pred -CCCCC--CCCCCCCChhhHHHHHHHHHHHHHH--------hCCCCcEEEEEeccCCCCCCC-CcccHHHHHHHHHHHHH
Q 009560 298 -HSASR--DGTTDWPASDYISQTLDVIDFLASR--------YAKHPALLGIELLNEPSAATV-PLDILVPYYKQGYQIVR 365 (532)
Q Consensus 298 -~sg~~--~g~~~W~~~~~~~~~~~~w~~la~r--------y~~~p~v~g~EL~NEP~~~~~-~~~~l~~~~~~~~~aIR 365 (532)
..|.. .....|.++..++.+.++|+.|++| |+++|.|++|||+|||..... +.+.+.+|+++++++||
T Consensus 123 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir 202 (373)
T 1rh9_A 123 VQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLK 202 (373)
T ss_dssp HHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHH
Confidence 00100 1123566789999999999999999 999999999999999987422 34678999999999999
Q ss_pred hhCCCcEEEEeC-CCCCC-----Cchhh------hhccCCCCc-EEEEeeecccCCCccccCChhhhHHHHHHHHHHHHH
Q 009560 366 KYSPTAYVIVCQ-RIGNA-----DPLEL------YQANIGLHN-IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQ 432 (532)
Q Consensus 366 ~~~~~~~Viv~~-~~~~~-----~~~~~------~~~~~~~~n-vv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~ 432 (532)
+.+|+++|+++. ++.+. ++..+ ... ...++ .++++|+|... +....+...............+.
T Consensus 203 ~~dp~~~v~~g~~g~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~~s~H~Y~~~--~~~~~~~~~~~~~~~~~l~~~~~ 279 (373)
T 1rh9_A 203 SIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISN-NQVQGIDFTTIHMYPNQ--WLPGLTQEAQDKWASQWIQVHID 279 (373)
T ss_dssp HHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHH-HTSTTCCCEEEECCHHH--HSTTSCHHHHHHHHHHHHHHHHH
T ss_pred hhCCCceEEeCcccccCCCCCcCCccccccccchhhh-ccCCCcCeEEEeeCCcc--cCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999998863 22211 11111 111 12233 48999999741 11111222222222222222222
Q ss_pred HHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHH----HHHh--CCCcEEEEcccCC
Q 009560 433 ALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLE----VYNA--ASFGWAYWTLKND 487 (532)
Q Consensus 433 ~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~----~~~~--~~~Gw~yW~~k~e 487 (532)
. .+..++|++|+|||......+.+.+....|++..++ .+++ ...|++||+|+.+
T Consensus 280 ~-~~~~~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 339 (373)
T 1rh9_A 280 D-SKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQ 339 (373)
T ss_dssp H-HHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCT
T ss_pred H-HHhcCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeEeeeecCCC
Confidence 2 233478999999998754334455555555554333 3332 3489999999985
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.4e-25 Score=233.78 Aligned_cols=252 Identities=11% Similarity=0.138 Sum_probs=165.2
Q ss_pred HHHHHHHHHcCCCEEEEc-------ccc--ccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIP-------VGW--WIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-------v~w--w~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
++||+.||++|+|+||++ +.| |...++.+ +.|+++.++.||++|++|.++||+|||++|.. +..
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~-g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~------~~~ 137 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF-GNYDETLLQGLDYLLVELAKRDMTVVLYFNNF------WQW 137 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST-TCBCHHHHHHHHHHHHHHHHTTCEEEEECCBS------SST
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEcccc------ccc
Confidence 799999999999999998 322 33344444 36788899999999999999999999999953 221
Q ss_pred CCCC---------C-----------------CCCCCCChhhHHHHHHHHHHHHHH--------hCCCCcEEEEEeccCCC
Q 009560 299 SASR---------D-----------------GTTDWPASDYISQTLDVIDFLASR--------YAKHPALLGIELLNEPS 344 (532)
Q Consensus 299 sg~~---------~-----------------g~~~W~~~~~~~~~~~~w~~la~r--------y~~~p~v~g~EL~NEP~ 344 (532)
+|.. . ....|.++..++.+.++|+.|++| |+++|.|++|||.|||.
T Consensus 138 ~Gg~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~ 217 (440)
T 1uuq_A 138 SGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPR 217 (440)
T ss_dssp TCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCC
T ss_pred cCCchhhHHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcc
Confidence 1100 0 012456778899999999999999 99999999999999998
Q ss_pred CCCC-----CcccHHHHHHHHHHHHHhhCCCcEEEEeC-CCCCCC--chhhhhccCCCCcEEEEeeecccCCCccccCCh
Q 009560 345 AATV-----PLDILVPYYKQGYQIVRKYSPTAYVIVCQ-RIGNAD--PLELYQANIGLHNIVVDLHYYNLFDTFFVNMST 416 (532)
Q Consensus 345 ~~~~-----~~~~l~~~~~~~~~aIR~~~~~~~Viv~~-~~~~~~--~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~ 416 (532)
.... +.+.+.+|+++++++||+.||+++|+++. ++.+.+ ...+........-.++++|+|.+..........
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~ 297 (440)
T 1uuq_A 218 PGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKP 297 (440)
T ss_dssp SCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSH
T ss_pred cccCcccccchHHHHHHHHHHHHHHHhhCCCCeEEECCccccCCCCcchhhHHhccCCCCCEEEEEeCCCccccCCCccc
Confidence 7421 34678899999999999999999999863 332111 112222111222348999999862111111111
Q ss_pred hhhH----HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC----CCCCHHHHHHHHHHHHHHHH----h--CCCcEEEE
Q 009560 417 VDNI----LFIYKSREAQLQALNNANGPLVFIGEWVNEWNV----TSGTQKDYQDFGSAQLEVYN----A--ASFGWAYW 482 (532)
Q Consensus 417 ~~~i----~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~----~~a~~~~~~~~~~~ql~~~~----~--~~~Gw~yW 482 (532)
.... ..+.....+.+ .+.+..++|++|+|||..... ++.+.+...+|++...+.+. + ...|++||
T Consensus 298 ~~~~~~~~~~~~~~~~~~~-~~a~~~~kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W 376 (440)
T 1uuq_A 298 AETWPSAWEKAQNYMRAHI-DVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIW 376 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEES
T ss_pred cccHHHHHHHHHHHHHHHH-HHHHHhCCCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEe
Confidence 1111 11222111222 223344789999999986431 12334455666665544332 2 34799999
Q ss_pred cccCC
Q 009560 483 TLKND 487 (532)
Q Consensus 483 ~~k~e 487 (532)
+|...
T Consensus 377 ~~~d~ 381 (440)
T 1uuq_A 377 AWNGY 381 (440)
T ss_dssp CEEET
T ss_pred eecCC
Confidence 99853
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-24 Score=221.08 Aligned_cols=242 Identities=19% Similarity=0.176 Sum_probs=157.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCC---------CC--CCCCC--cChHHHHHHHHHHHHHcCCEEEEEcCCC---CC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDP---------DP--PAPFI--GGSLEALDNALSWAEAYNIKCIIDLHAA---PG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~---------~~--~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDlH~~---pG 291 (532)
++||+.||++|+|+||+++.++....| .+ ...++ ++.++.||+++++|.++||+||||+|.. +|
T Consensus 39 ~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g 118 (344)
T 1qnr_A 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccC
Confidence 799999999999999998755321111 11 11233 6689999999999999999999999953 11
Q ss_pred CCCCCC-CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCC
Q 009560 292 SQNGME-HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 292 sqn~~~-~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
+++.+. ..+. .....|.++..++.+.++|+.+++||+++|.|++|||.|||.....+.+.+.+|+++++++||+++|+
T Consensus 119 ~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp~ 197 (344)
T 1qnr_A 119 GINAYVNAFGG-NATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSN 197 (344)
T ss_dssp HHHHHHHHHCS-CTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHhCC-ChhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCCC
Confidence 110000 0000 11234667888999999999999999999999999999999875445678999999999999999999
Q ss_pred cEEEEeC-CCCCC----C-c------hhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcC
Q 009560 371 AYVIVCQ-RIGNA----D-P------LELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNAN 438 (532)
Q Consensus 371 ~~Viv~~-~~~~~----~-~------~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 438 (532)
++|+++. +++.. . + .++........-.++++|.|+... .. ........+... + ...+..
T Consensus 198 ~~v~~g~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~---~~-~~~~~~~~~~~~----~-~~~~~~ 268 (344)
T 1qnr_A 198 HLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSW---GT-NYTWGNGWIQTH----A-AACLAA 268 (344)
T ss_dssp SEEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHH---TC-CSTHHHHHHHHH----H-HHHHHT
T ss_pred CEEEECCccccCCCCCccCCccccccCcHHHHhCCCCCCeEEeeeCCCcc---Cc-cchHHHHHHHHH----H-HHHHHc
Confidence 9998863 33111 0 0 011111112233589999997521 11 111111222221 1 123345
Q ss_pred CCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCC-CcEEEEcccC
Q 009560 439 GPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAAS-FGWAYWTLKN 486 (532)
Q Consensus 439 g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~-~Gw~yW~~k~ 486 (532)
++|++|+|||..... ......|++..+ ...+ .|++||+|..
T Consensus 269 ~kPv~l~E~G~~~~~----~~~~~~~~~~~~---~~~~~~g~~~W~~~d 310 (344)
T 1qnr_A 269 GKPCVFEEYGAQQNP----CTNEAPWQTTSL---TTRGMGGDMFWQWGD 310 (344)
T ss_dssp TSCEEEEEECCSSCH----HHHHHHHHHHHH---TSTTEEEEEESCEEC
T ss_pred CCCEEEeecCCCCCC----CchHHHHHHHHH---hcCCCCceEEEeccC
Confidence 789999999986431 123345555432 2234 4999999976
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-24 Score=218.33 Aligned_cols=233 Identities=16% Similarity=0.118 Sum_probs=149.9
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCC---CCCCC--CCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC-C
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDP---DPPAP--FIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS-A 300 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~---~~~~~--~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s-g 300 (532)
.++||+.||++|+|+||+|+.++....| .++.. .++..++.+|+++++|+++||+|||++|.. +... +
T Consensus 47 ~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~------~~~~~g 120 (353)
T 2c0h_A 47 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNG------AVKQST 120 (353)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEEC------SCCCTT
T ss_pred HHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCc------cccCCC
Confidence 3899999999999999999988744333 11111 133689999999999999999999999741 1111 1
Q ss_pred CCCCCCCCCChh-hHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC---------------------------CCccc
Q 009560 301 SRDGTTDWPASD-YISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT---------------------------VPLDI 352 (532)
Q Consensus 301 ~~~g~~~W~~~~-~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~---------------------------~~~~~ 352 (532)
.......+.+++ .++.+.++|+.+++||+++|+|++|||+|||.... ...+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 200 (353)
T 2c0h_A 121 HYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQE 200 (353)
T ss_dssp HHHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHH
T ss_pred cccccceEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHH
Confidence 000000022232 33444578899999999999999999999998631 11256
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEeCC--CCCCCc----hhh-----hhc-cCCCCcE-EEEeeecccCCCccccCChhhh
Q 009560 353 LVPYYKQGYQIVRKYSPTAYVIVCQR--IGNADP----LEL-----YQA-NIGLHNI-VVDLHYYNLFDTFFVNMSTVDN 419 (532)
Q Consensus 353 l~~~~~~~~~aIR~~~~~~~Viv~~~--~~~~~~----~~~-----~~~-~~~~~nv-v~s~H~Y~~f~~~~~~~~~~~~ 419 (532)
+.+++++++++||+++|+++|+++.. +...+. ..+ ... ....+++ ++++|+|.+... +......
T Consensus 201 ~~~~~~~~~~~Ir~~dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~D~~s~H~Y~~~~~-~~~~~~~-- 277 (353)
T 2c0h_A 201 IGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNH-FGNESPF-- 277 (353)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTB-CCTTCTT--
T ss_pred HHHHHHHHHHHHHhhCCCCeEEECCccccCCCcccCcCCCCcchhhhhhccccCCCCCEEEEeeCCCccc-ccccCcc--
Confidence 88999999999999999999998741 211110 001 000 0124566 999999986322 1110000
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCC-CcEEEEcccC
Q 009560 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAAS-FGWAYWTLKN 486 (532)
Q Consensus 420 i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~-~Gw~yW~~k~ 486 (532)
.. .+..+ ..+.|++|+|||..... +. ++.+.++.+.+.+ .||++|+|..
T Consensus 278 ---~~-----~~~~~--~~~~P~~i~E~G~~~~~-~~-------~~~~~~~~~~~~g~~g~~~W~~~d 327 (353)
T 2c0h_A 278 ---KH-----SFSNF--RLKKPMVIGEFNQEHGA-GM-------SSESMFEWAYTKGYSGAWTWSRTD 327 (353)
T ss_dssp ---SS-----CGGGG--CCSSCEEEEECCGGGST-TC-------CHHHHHHHHHHTTCSEEEESCSSS
T ss_pred ---cc-----hHHHh--cCCCCEEEEecCCCCCC-Cc-------cHHHHHHHHHHCCCcEEEEEEEcC
Confidence 00 00001 24689999999987532 11 2334445555677 9999999998
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-23 Score=224.01 Aligned_cols=157 Identities=24% Similarity=0.386 Sum_probs=133.6
Q ss_pred ccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecC-CeEEEEecCCeEEEEeCCCc
Q 009560 52 PSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSE-SEFQFRTSQGQFLTCDGEGC 130 (532)
Q Consensus 52 ~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~-~~~~lr~~~~~~v~~~~~g~ 130 (532)
-.+|.-.. .++||+|+|. ||||||+++|| .|+|||+++++||+|+|+.+++ ++|+||+.+|+||++++.|.
T Consensus 251 ~E~F~L~~-----~~~qVaL~s~-ngkyVsa~~gg--~l~An~~~~~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~~g~ 322 (493)
T 3llp_A 251 DELFALEQ-----SCAQVVLQAA-NERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGG 322 (493)
T ss_dssp GGCEEEEE-----CCCEEEEECT-TSCEEECC-CC--CCEEEESCCSGGGCEEEEECTTTCCEEEECTTSCEEEECTTSB
T ss_pred ceEEEEEe-----CCCEEEEEec-CCcEEEecCCc--eEEeeCCCCCCcEEEEEEEeCCCCEEEEEeCCCCEEEEeCCCc
Confidence 45666332 5699999986 99999999986 6999999999999999999874 77999999999999999886
Q ss_pred eEEEeecCCCCCceEEEEEcCCCcEEEEecCCceEEeccCceEEeCCCCCCCCCCCCcceeeecccCC---CCccceeec
Q 009560 131 VVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAATFEMAIVANN---LHGDYQLAN 207 (532)
Q Consensus 131 ~~~a~~~~~~~~e~F~~v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~~W~~~ps~f~~~~~~~~---~~~e~~l~~ 207 (532)
|+|+++++++||+|+++++ +++|+||++||+||+++.++.|+|++... +++..|.|..+.++ +.+|| +
T Consensus 323 -v~a~~~~~g~~E~F~i~~~-~g~vaLkA~NGkyVsa~~~G~L~An~~~~----g~~E~F~l~l~nrp~l~Lrg~~---G 393 (493)
T 3llp_A 323 -VQSTASSKNASCYFDIEWR-DRRITLRASNGKFVTSKKNGQLAASVETA----GDSELFLMKLINRPIIVFRGEH---G 393 (493)
T ss_dssp -EEEEESSCCGGGCBEEEEE-TTEEEEECTTSCEEEECTTSBEEEEESSC----CGGGCBEEEECSCSEECCEETT---E
T ss_pred -EEeccCCCCCcceEEEEeC-CCeEEEEeCCCCEEEEcCCCEEEEecCCC----CCCeEEEEEECCCceEEEeccc---C
Confidence 9999999999999999999 68999999999999999999999999764 34678888876643 77787 5
Q ss_pred ccChhhHHHHHHhhcccc
Q 009560 208 GYGHERAKEVLKRHRNTF 225 (532)
Q Consensus 208 ~~G~~~a~~~~~~hw~t~ 225 (532)
.+|..++...|+.||+++
T Consensus 394 ~vg~~~~~~~l~~nr~~~ 411 (493)
T 3llp_A 394 FIGCRKVTGTLDANRSSY 411 (493)
T ss_dssp EEEEC--CCBEEEEESSC
T ss_pred cEEeccCcchhhcccccc
Confidence 678788888899999875
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=203.65 Aligned_cols=234 Identities=19% Similarity=0.149 Sum_probs=151.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC-------CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD-------PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~-------~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg 300 (532)
++||+.||++|+|+||+|++......+. .+..+.+..++.+|+++++|.++||+||||+|...+.+.+....
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~~- 123 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNRL- 123 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGHH-
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCcc-
Confidence 7999999999999999998754322211 11234557899999999999999999999999764332211100
Q ss_pred CCCCCCCCC-ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC---------------------------CCccc
Q 009560 301 SRDGTTDWP-ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT---------------------------VPLDI 352 (532)
Q Consensus 301 ~~~g~~~W~-~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~---------------------------~~~~~ 352 (532)
...+. ++..++.+.++|+++++||+++|+|++|+|.|||.... ...+.
T Consensus 124 ----~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (351)
T 3vup_A 124 ----DGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQD 199 (351)
T ss_dssp ----HHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHH
T ss_pred ----ccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhh
Confidence 00011 23455667789999999999999999999999996421 12356
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEeCC-C-CCCCc--------hh---hhhccCCCCcEEEEeeecccCCCccccCChhhh
Q 009560 353 LVPYYKQGYQIVRKYSPTAYVIVCQR-I-GNADP--------LE---LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDN 419 (532)
Q Consensus 353 l~~~~~~~~~aIR~~~~~~~Viv~~~-~-~~~~~--------~~---~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~ 419 (532)
+.+|++.+.++||+.+|+++|.++.. + ...+. .. +..........++++|.|+.... +......
T Consensus 200 ~~~~~~~~~~~ik~~dp~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~-~~~~~~~-- 276 (351)
T 3vup_A 200 ILRFLNWQADAIKTTDPGALVTMGVWNPKSNTDHFNMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGK-WDEVAPF-- 276 (351)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEESSGGGSCSSTTCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTB-CCTTCGG--
T ss_pred HHHHHHHHHHHhhccCCCCeeEecCcccccccCccccccccccccccccccccccccceeeeeccCcccc-cchhhhH--
Confidence 88999999999999999999988631 1 10110 00 11111234456899999975322 1111110
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 420 ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 420 i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.. .......++|++|||||+.... +...+. +++ .+++....|.++|+|..
T Consensus 277 ---~~-------~~~~~~~~kPvii~Efg~~~~~-~~~~~~---~~~---~~~~~~~~G~~~W~~~d 326 (351)
T 3vup_A 277 ---TH-------QASDYGLHKPIVVGEFWEQDGG-GMTITQ---MFN---YVYNHGYAGAWSWHLVQ 326 (351)
T ss_dssp ---GS-------CGGGGCCSSCEEEEECCGGGST-TCCHHH---HHH---HHHHTTCSEEEEECHHH
T ss_pred ---HH-------HHHhcCCCCcEEEEeCCCCCCC-CcCHHH---HHH---HHHhcCCeEEEEEeeec
Confidence 00 0012344689999999987543 223332 222 23444567999999986
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=194.45 Aligned_cols=267 Identities=15% Similarity=0.154 Sum_probs=177.8
Q ss_pred HHHHHhhccccCCH-----HHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC-
Q 009560 215 KEVLKRHRNTFITI-----EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA- 288 (532)
Q Consensus 215 ~~~~~~hw~t~ite-----~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~- 288 (532)
-..+++||.+|+++ ++++.||++|+|+|||++ | .+|.++ ...++++++++++|+++||+|+||+|.
T Consensus 12 ~~~~e~~g~~~~~~~G~~~d~~~ilk~~G~N~VRi~~--w--~~P~~g----~~~~~~~~~~~~~A~~~GlkV~ld~Hys 83 (332)
T 1hjs_A 12 VVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRV--W--VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYS 83 (332)
T ss_dssp HHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--C--SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCEEECCCCCcccHHHHHHHCCCCEEEEee--e--eCCCCC----cCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 45689999999997 899999999999999998 3 344422 126899999999999999999999997
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCC--hhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCC-------CCCcccHH
Q 009560 289 ----APGSQNGMEHSASRDGTTDWPA--SDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAA-------TVPLDILV 354 (532)
Q Consensus 289 ----~pGsqn~~~~sg~~~g~~~W~~--~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~-------~~~~~~l~ 354 (532)
.||+|+ .+..|.+ +...+...++-+.++++++... .+..+.+.||+... ....+.+.
T Consensus 84 d~WadPg~Q~---------~p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~ 154 (332)
T 1hjs_A 84 DTWADPAHQT---------MPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIA 154 (332)
T ss_dssp SSCCBTTBCB---------CCTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHH
T ss_pred CCcCCccccC---------CccccccchHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHH
Confidence 477665 2446766 3444555555555555554321 12236788887642 12457899
Q ss_pred HHHHHHHHHHHhhC--CCcEEEEeCCCCCCC--chhhhhcc------CCCCcEEEEeeecccCCCccccCChhhhHHHHH
Q 009560 355 PYYKQGYQIVRKYS--PTAYVIVCQRIGNAD--PLELYQAN------IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIY 424 (532)
Q Consensus 355 ~~~~~~~~aIR~~~--~~~~Viv~~~~~~~~--~~~~~~~~------~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~ 424 (532)
+++++++++||+++ |+..|+++...+... ...|++.. ...+-.|+.+|+|+.|+.. .+ ...+.
T Consensus 155 ~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~---~~----~~~l~ 227 (332)
T 1hjs_A 155 RLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---AT----LSALK 227 (332)
T ss_dssp HHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCC---CC----HHHHH
Confidence 99999999999999 988888875432111 12232211 1227889999999875421 11 12222
Q ss_pred HHHHHHHHHHHhcCCCcEEEeccCcccCCC-------------CCCHHHHHHHHHHHHHHHHhC--CCcEEEEcc--cCC
Q 009560 425 KSREAQLQALNNANGPLVFIGEWVNEWNVT-------------SGTQKDYQDFGSAQLEVYNAA--SFGWAYWTL--KND 487 (532)
Q Consensus 425 ~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~-------------~a~~~~~~~~~~~ql~~~~~~--~~Gw~yW~~--k~e 487 (532)
+.+..+.++.++||+|.|+|..+... ..+.+....|+++.++...+. +.|-+||.. .+.
T Consensus 228 ----~~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~~~~~G~fyWep~w~~~ 303 (332)
T 1hjs_A 228 ----SSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPAWIHN 303 (332)
T ss_dssp ----HHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECTTCGGG
T ss_pred ----HHHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEccccccC
Confidence 33455565668999999999876421 235667788999999888765 679999973 221
Q ss_pred ---CCCCchHhhHhCCccc--CCCCCCcceee
Q 009560 488 ---RKHWDFEWNIRNNYLQ--LGNSPNMQIFN 514 (532)
Q Consensus 488 ---~~~Ws~~~~~~~g~~~--~~~~p~~~~~~ 514 (532)
+..|+- .|++. ..|.|.+++|.
T Consensus 304 ~g~g~~~~~-----~glfd~~g~p~~a~~~~~ 330 (332)
T 1hjs_A 304 ANLGSSCAD-----NTMFSQSGQALSSLSVFQ 330 (332)
T ss_dssp TTTTSSSSB-----CCSBCTTSBBCGGGGGGG
T ss_pred CCCCCcCCC-----CceECCCCCCcHHHHHHh
Confidence 234433 24454 34556565553
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=179.13 Aligned_cols=125 Identities=16% Similarity=0.271 Sum_probs=109.5
Q ss_pred ecccCccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEE----cCCCCCCcceEEEEEecCCeEEEEecCCeE
Q 009560 47 EGWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSV----TRDVASSWETFTLWRVSESEFQFRTSQGQF 122 (532)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~a----nr~~~~~wE~f~~~~~~~~~~~lr~~~~~~ 122 (532)
|+||+|++|+.|++ +++|+++ .|+|++|+.+|.-.+.+ ||+.+++||+|+|++.+++.|+||+.+|+|
T Consensus 12 ~gW~~~~~~~~i~g-----~~~i~~~---~~~y~~A~~~G~~t~~~~~~~~~~~~~~~E~f~l~~~~~~~v~LRs~~GkY 83 (155)
T 2yug_A 12 GIWWTVSNFGEISG-----TIAIEMD---KGAYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGKY 83 (155)
T ss_dssp TTEEECSSGGGCCE-----EEEEECS---SSCBEEECTTSCEEECCCCSSSSCCCCTTTCEEEEECSSSCEEEEETTSCB
T ss_pred CcEEecCchhcCCC-----CEEEEeC---CCCEEEEEcCCcEEEccccccccCCCCCcceEEEEECCCCEEEEEeCCCCE
Confidence 88999999999986 4566554 38999999987322222 388999999999999998899999999999
Q ss_pred EEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEecCCceEEeccCceEEeCCCCCC
Q 009560 123 LTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMP 181 (532)
Q Consensus 123 v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~ 181 (532)
|+++..|. |+|++++++++|+|+++.. +++++||+.||+||+++.++.|.|+....+
T Consensus 84 Ls~~~~G~-v~a~a~~~g~~E~F~l~~~-~G~~aLra~nG~yl~~~~~g~l~a~a~~~~ 140 (155)
T 2yug_A 84 LGINSDGL-VVGRSDAIGPREQWEPVFQ-DGKMALLASNSCFIRCNEAGDIEAKNKTAG 140 (155)
T ss_dssp EEECSSSB-EEECCSSCCTTTBEEEECS-TTCCEEEETTSCBEEECSSSCEEECCSCCC
T ss_pred EEecCCCc-EEeccCCCCCCCEEEEEEE-CCEEEEEeCCCCEEEEcCCCcEEEecCCCC
Confidence 99999885 9999999999999999999 889999999999999999899999987654
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-19 Score=189.36 Aligned_cols=242 Identities=17% Similarity=0.223 Sum_probs=168.8
Q ss_pred HHhhccccCC-----HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcC--hHHHHHHHHHHHHHcCCEEEEEcCC--
Q 009560 218 LKRHRNTFIT-----IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGG--SLEALDNALSWAEAYNIKCIIDLHA-- 288 (532)
Q Consensus 218 ~~~hw~t~it-----e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~--~l~~Ld~~v~~a~k~Gi~VILDlH~-- 288 (532)
++++..+|.+ +++++.||++|+|+|||++ |.-....++.+|.++ .++++.+++++|+++||+|+||+|-
T Consensus 36 ~e~~G~~y~~~~G~~~d~~~ilk~~G~N~VRlrv--wv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD 113 (399)
T 1ur4_A 36 LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSD 113 (399)
T ss_dssp HHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--CSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred HHHcCCeeeCCCCccchHHHHHHHCCCCEEEEee--ecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 5555555554 6899999999999999998 422222234566443 5999999999999999999999995
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCC---hhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC---CCcccHHHHHH
Q 009560 289 ---APGSQNGMEHSASRDGTTDWPA---SDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT---VPLDILVPYYK 358 (532)
Q Consensus 289 ---~pGsqn~~~~sg~~~g~~~W~~---~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~---~~~~~l~~~~~ 358 (532)
.||+|+. +..|.+ ++..+++.++-+.+++++++.. .+-.+++.||+.... ...+.+.+++.
T Consensus 114 ~WadPg~Q~~---------P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ 184 (399)
T 1ur4_A 114 FWADPAKQKA---------PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFN 184 (399)
T ss_dssp SCCSSSCCCC---------CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHH
T ss_pred ccCCcccccC---------ccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHH
Confidence 3666652 334654 3455566677777777776654 344799999998632 23577888999
Q ss_pred HHHHHHHhhCCCcEEEEeCCCCCCC--chhhhhc--cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH
Q 009560 359 QGYQIVRKYSPTAYVIVCQRIGNAD--PLELYQA--NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 359 ~~~~aIR~~~~~~~Viv~~~~~~~~--~~~~~~~--~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~ 434 (532)
+++++||+++|+..|+++...+... ...+++. ..+.+-.|+.+|+|+.|+. + +..+ .+.+..+
T Consensus 185 ag~~aVR~v~p~~~V~ih~~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~-----~----l~~l----~~~l~~l 251 (399)
T 1ur4_A 185 AGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----T----LKNL----TSVLTSV 251 (399)
T ss_dssp HHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----C----HHHH----HHHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEeCCCcchHHHHHHHHHHHHcCCCcCeEeEecCccchh-----h----HHHH----HHHHHHH
Confidence 9999999999999988875433211 1223221 1345688999999986542 1 2222 2334455
Q ss_pred HhcCCCcEEEeccCcccCCC------------------CCCHHHHHHHHHHHHHHHHhC---CCcEEEEc
Q 009560 435 NNANGPLVFIGEWVNEWNVT------------------SGTQKDYQDFGSAQLEVYNAA---SFGWAYWT 483 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~------------------~a~~~~~~~~~~~ql~~~~~~---~~Gw~yW~ 483 (532)
.++.++||+|.|+|..+... ..+.+...+|+++++++..+. +.|-+||.
T Consensus 252 ~~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~l~~l~~~v~~~~~~g~GvfyWe 321 (399)
T 1ur4_A 252 ADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 321 (399)
T ss_dssp HHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred HHHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhccCceEEEEEEc
Confidence 55568999999999886421 135677889999999988765 57999997
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.4e-20 Score=188.02 Aligned_cols=248 Identities=13% Similarity=0.039 Sum_probs=152.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC-----------------------CCCCCCcChHHHHHHHHHHHHHcCCEEEE
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD-----------------------PPAPFIGGSLEALDNALSWAEAYNIKCII 284 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~-----------------------~~~~~~~~~l~~Ld~~v~~a~k~Gi~VIL 284 (532)
+++|+.||++|+|+||+...+.....+. .+..+.+..++.+|+++++|+++||+||+
T Consensus 40 ~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~ 119 (387)
T 4awe_A 40 EKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIV 119 (387)
T ss_dssp HHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEE
Confidence 7899999999999999965331111000 00112234688899999999999999999
Q ss_pred EcCCCCCCCCCCCC----CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC------------C
Q 009560 285 DLHAAPGSQNGMEH----SASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT------------V 348 (532)
Q Consensus 285 DlH~~pGsqn~~~~----sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~------------~ 348 (532)
++|.......+.+. .+.......+.++..++.+.+.++.+++|||++|+|++|||.|||.... .
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~ 199 (387)
T 4awe_A 120 ALTNNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGC 199 (387)
T ss_dssp ECCBSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSC
T ss_pred eecccccccCCCcccccccccccccccccCHHHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCcccccccccccc
Confidence 99975332211100 0001111223457888999999999999999999999999999998632 2
Q ss_pred CcccHHHHHHHHHHHHHhhCCCcEEEEeC-CCCCC-Cch-----------hhhhccCCCCcEEEEeeecccCCCccccCC
Q 009560 349 PLDILVPYYKQGYQIVRKYSPTAYVIVCQ-RIGNA-DPL-----------ELYQANIGLHNIVVDLHYYNLFDTFFVNMS 415 (532)
Q Consensus 349 ~~~~l~~~~~~~~~aIR~~~~~~~Viv~~-~~~~~-~~~-----------~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~ 415 (532)
..+.+..+++++.++||+.||+++|.++. ++... ... ..........-.++++|.|+.... ..
T Consensus 200 ~~~~~~~~~~~~~~~ik~~Dp~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~----~~ 275 (387)
T 4awe_A 200 TTETVTGWIEEMSAYVKSLDGNHLVTWGGEGGFNRGEDEEDGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWS----KS 275 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCC--CCTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHT----CC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcEEEcccccccCCCccccccccccccccchhcccCCccceeeecccccccc----hh
Confidence 34678899999999999999999998864 21110 000 000000122345899999975211 11
Q ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC---------CCCCCHH-HHHHHHHHHHHHHHhCCCcEEEEccc
Q 009560 416 TVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN---------VTSGTQK-DYQDFGSAQLEVYNAASFGWAYWTLK 485 (532)
Q Consensus 416 ~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~---------~~~a~~~-~~~~~~~~ql~~~~~~~~Gw~yW~~k 485 (532)
.. .... +...........++|++++|||.... ....... .+..|.. ........|++||+|.
T Consensus 276 ~~----~~~~-~~~~~~~~~~~~~kp~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~W~~~ 347 (387)
T 4awe_A 276 IE----WSNQ-WIHDHAASGRAANKPVVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQK---IAIQEKLAGDMYWQFG 347 (387)
T ss_dssp HH----HHHH-HHHHHHHHHHHHTCCEEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHH---HHHHHTCSEEEESCEE
T ss_pred hh----hhHH-HHHHHHHHHHhcCCCeeeccccccccCCCccchhhhhHHHHHHHHHHHHH---HHhCCCCeEEEEEEEc
Confidence 11 1111 11112223344578999999997532 1111111 1222322 2334578899999998
Q ss_pred CC
Q 009560 486 ND 487 (532)
Q Consensus 486 ~e 487 (532)
.+
T Consensus 348 ~~ 349 (387)
T 4awe_A 348 YG 349 (387)
T ss_dssp CS
T ss_pred CC
Confidence 75
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=8.7e-19 Score=187.27 Aligned_cols=309 Identities=14% Similarity=0.144 Sum_probs=191.5
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|++|
T Consensus 34 wG~Atsa~QiEGa~~~dGkg~siwD~~~~~-~~----~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~~R~si 102 (468)
T 2j78_A 34 WGVATASYQIEGSPLADGAGMSIWHTFSHT-PG----NVKNGDTGDVACDHYNRW------KEDIEIIEKLGVKAYRFSI 102 (468)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeeeCcHHHhcCCcCCCCCCCeeeEEeccc-CC----cccCCCCCcccccccccC------HHHHHHHHHcCCCEEEecc
Confidence 45567789999999 555 9999974432 11 122333446678888776 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|..++.+++..++++|++|+.|.++||.+||+||+. +.+........|.++...+.++++++.+++
T Consensus 103 ~W~Ri-~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~-------d~P~~l~~~ggw~~~~~~~~F~~ya~~~~~ 174 (468)
T 2j78_A 103 SWPRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW-------DLPFALQLKGGWANREIADWFAEYSRVLFE 174 (468)
T ss_dssp CHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTTHHHHHHHHHHHHHH
T ss_pred CHHHh-CCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccCC-------CCchhhhhcCCCCChHHHHHHHHHHHHHHH
Confidence 98544 5553457788999999999999999999999999874 211111111368889999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCCc--------ccHHHHHHHHHHHHHhhCCCcEEEEe--CCC---CC
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVPL--------DILVPYYKQGYQIVRKYSPTAYVIVC--QRI---GN 381 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~~--------~~l~~~~~~~~~aIR~~~~~~~Viv~--~~~---~~ 381 (532)
||++. |..|+++|||.. ++... ..+.....++++++|+.+|+..|-+. ..+ .+
T Consensus 175 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~ 252 (468)
T 2j78_A 175 NFGDR--VKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPAS 252 (468)
T ss_dssp HHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEEEEEESS
T ss_pred HhCCc--cceEEEccccchhhccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCCeeecCC
Confidence 99984 445899999974 11110 01222235677889999887544321 100 01
Q ss_pred CCch---------hh-------------------hh-----cc---------CCCCcEEEEeeecccCCCccc--c----
Q 009560 382 ADPL---------EL-------------------YQ-----AN---------IGLHNIVVDLHYYNLFDTFFV--N---- 413 (532)
Q Consensus 382 ~~~~---------~~-------------------~~-----~~---------~~~~nvv~s~H~Y~~f~~~~~--~---- 413 (532)
.++. .+ .. .+ ....-..+.+++|.+..-... .
T Consensus 253 ~~~~D~~aa~~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~~ 332 (468)
T 2j78_A 253 EKEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVGLNYYSGHLVKFDPDAPAKV 332 (468)
T ss_dssp SCHHHHHHHHHHHHHHSTHHHHHHHHHSSCCHHHHHHHGGGSCTTGGGGHHHHTCCCSEEEEEEEEEEEEEECTTC-CCE
T ss_pred CCHHHHHHHHHHHHHhhhceeehheeccccChHHHHHHHhhCCCCCHHHHHHhcCCCCEEEeccccCeEEecCCCCCccc
Confidence 1110 00 00 00 112346899999976311000 0
Q ss_pred ---------CChhhhH--HHHHHHHHHHHHHHHhc-CCCcEEEeccCcccCC-C---C-CCHHH----HHHHHHHHHHHH
Q 009560 414 ---------MSTVDNI--LFIYKSREAQLQALNNA-NGPLVFIGEWVNEWNV-T---S-GTQKD----YQDFGSAQLEVY 472 (532)
Q Consensus 414 ---------~~~~~~i--~~i~~~~~~~~~~~~~~-~g~pv~vGEwG~~~~~-~---~-a~~~~----~~~~~~~ql~~~ 472 (532)
....|.+ .-++ ..+..+.++ +.+||+|+|-|..... . + -..+. ++.+++++..+.
T Consensus 333 ~~~~~~~~~t~~gW~i~P~gl~----~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai 408 (468)
T 2j78_A 333 SFVERDLPKTAMGWEIVPEGIY----WILKKVKEEYNPPEVYITENGAAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAI 408 (468)
T ss_dssp EEECCSSCBCTTCCBCCTHHHH----HHHHHHHHHHCCSCEEEEEECCCCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCccCCCCCccCHHHHH----HHHHHHHHHcCCCCEEEEecCCCCCCccccCCccCCHHHHHHHHHHHHHHHHHH
Confidence 0001111 1222 122333333 3489999999986432 0 0 01122 344555555566
Q ss_pred Hh--CCCcEEEEcccCCCCCCchHhhHhCCcccC
Q 009560 473 NA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQL 504 (532)
Q Consensus 473 ~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~ 504 (532)
+. .-.|.+.|++-.. -.|......+-|++--
T Consensus 409 ~dGv~v~GY~~Wsl~Dn-~eW~~gy~~RfGli~V 441 (468)
T 2j78_A 409 QEGVPLKGYFVWSLLDN-FEWAEGYSKRFGIVYV 441 (468)
T ss_dssp HTTCCEEEEEEECSBCC-CCGGGGGGCCCCSEEE
T ss_pred HCCCCEEEEEEccCccc-ccccCCcccCCceEEe
Confidence 53 2269999999884 3477766677777753
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.75 E-value=7.8e-18 Score=178.42 Aligned_cols=308 Identities=15% Similarity=0.145 Sum_probs=191.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.|+++|+|++|+++
T Consensus 10 wG~atsa~Q~EGa~~~dGkg~siwD~~~~~-~~----~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~~R~si 78 (431)
T 1ug6_A 10 WGVATSAYQIEGATQEDGRGPSIWDAFAQR-PG----AIRDGSTGEPACDHYRRY------EEDIALMQSLGVRAYRFSV 78 (431)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHTTS-TT----SSTTSCCSSSTTCHHHHH------HHHHHHHHHHTCCEEEEEC
T ss_pred eeeeCchHhhcCCcCCCCCCCeEEEEeecC-CC----cccCCCCCcccccchhhh------HHHHHHHHHcCCCEEEccc
Confidence 34567889999999 555 9999975432 11 112223345788888777 8999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|.+.+++++..++.++++|+.|.++||.+||+||+. +.+........|.++...+.+.++++.+++
T Consensus 79 ~W~R-i~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~-------d~P~~l~~~ggw~~~~~~~~F~~ya~~~~~ 150 (431)
T 1ug6_A 79 AWPR-ILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHW-------DLPLALEERGGWRSRETAFAFAEYAEAVAR 150 (431)
T ss_dssp CHHH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHH
T ss_pred CHHH-cccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCcchhhcCCCCChHHHHHHHHHHHHHHH
Confidence 9854 45655357788999999999999999999999999974 221111112468889999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCC-c-------ccHHHHHHHHHHHHHhhCCCcEEEE--eCCCC-CCC
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVP-L-------DILVPYYKQGYQIVRKYSPTAYVIV--CQRIG-NAD 383 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~-~-------~~l~~~~~~~~~aIR~~~~~~~Viv--~~~~~-~~~ 383 (532)
||++. |..|.++|||.. ++.. . ..+.....++++++|+ +|+..|-+ ...+. ..|
T Consensus 151 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~-~~~~~iG~~~~~~~~~P~D 227 (431)
T 1ug6_A 151 ALADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRA-AGARRVGIVLNFAPAYGED 227 (431)
T ss_dssp HHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEECCEECSC
T ss_pred HhcCC--CceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCCCCChHH
Confidence 99986 446889999974 1111 0 0122223567788999 88755432 21110 011
Q ss_pred c------hhh----h-h------cc-------------------CCCCcEEEEeeecccCCCcc---------cc----C
Q 009560 384 P------LEL----Y-Q------AN-------------------IGLHNIVVDLHYYNLFDTFF---------VN----M 414 (532)
Q Consensus 384 ~------~~~----~-~------~~-------------------~~~~nvv~s~H~Y~~f~~~~---------~~----~ 414 (532)
. ..+ + + .| ....-..+.+++|.+..-.. .. .
T Consensus 228 ~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~p~~~~d~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~ 307 (431)
T 1ug6_A 228 PEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPA 307 (431)
T ss_dssp HHHHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCCCTTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCB
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCCHHHHHhcccCCCCHHHHHHhccCCCEEEEeccccceeccCCCCCccccCCCCCCc
Confidence 0 000 0 0 00 11234789999997631100 00 0
Q ss_pred -Chhhh--HHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC----C-CCHHH----HHHHHHHHHHHHHh--CCCcEE
Q 009560 415 -STVDN--ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT----S-GTQKD----YQDFGSAQLEVYNA--ASFGWA 480 (532)
Q Consensus 415 -~~~~~--i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~----~-a~~~~----~~~~~~~ql~~~~~--~~~Gw~ 480 (532)
...|. ..-++ ..+..+.++.+.||+|+|-|...... + -..+. .+++++++..+.+. .-.|.+
T Consensus 308 t~~gW~i~P~gl~----~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~ 383 (431)
T 1ug6_A 308 TAMGWEVYPEGLY----HLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYF 383 (431)
T ss_dssp CTTCCBCCHHHHH----HHHHHHHHHCSSCEEEEEECCCCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCccChHHHH----HHHHHHHHHhCCCEEEEeccCCcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 00111 11222 23334445555599999999864211 0 01122 34455555555654 336999
Q ss_pred EEcccCCCCCCchHhhHhCCcccC
Q 009560 481 YWTLKNDRKHWDFEWNIRNNYLQL 504 (532)
Q Consensus 481 yW~~k~e~~~Ws~~~~~~~g~~~~ 504 (532)
.|++-.. -.|......+-|++--
T Consensus 384 ~Wsl~Dn-~eW~~gy~~RfGl~~V 406 (431)
T 1ug6_A 384 VWSLMDN-FEWAFGYTRRFGLYYV 406 (431)
T ss_dssp EECSBCC-CCGGGGGGSCCCSEEE
T ss_pred EecCccc-cccccCCCCCccEEEe
Confidence 9999873 3477666677777753
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.4e-18 Score=178.81 Aligned_cols=297 Identities=13% Similarity=0.122 Sum_probs=183.2
Q ss_pred CceEEeCCCCCCCCCCCCcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccc
Q 009560 170 GNQLTSDYPGMPGWDDNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWW 249 (532)
Q Consensus 170 ~~~v~ad~~~~~~W~~~ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww 249 (532)
.|.-||.||.|+. .-||+++......+. ....+.|.+.++.+ ++|++.|+++|+|++|+++.|.
T Consensus 11 wG~atsa~Q~EGa--kg~s~wD~~~~~~~~--------~~~~~~a~d~Y~~~------~eDi~lm~~~G~~~~R~si~W~ 74 (423)
T 1vff_A 11 FGTATSSHQIEGN--NRWNDWWYYEQIGKL--------PYRSGKACNHWELY------RDDIQLMTSLGYNAYRFSIEWS 74 (423)
T ss_dssp EEEECCSTTTSSC--CTTBHHHHHHHTTSS--------CCSCCCTTCHHHHH------HHHHHHHHHHTCCEEEEECCHH
T ss_pred EEEeCchhhcCCC--CCCcceeeecccCCC--------cCCCcccccchhcc------HHHHHHHHHcCCCEEEeecCHH
Confidence 3456778998877 448999875433111 01335677777766 8999999999999999999985
Q ss_pred cccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhC
Q 009560 250 IAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYA 329 (532)
Q Consensus 250 ~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~ 329 (532)
. ..|.+ +.++++.++++|++|+.|+++||.+||+||+. +.+........|.++..++.+.++++.+++||+
T Consensus 75 r-i~P~~-g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~-------d~P~~l~~~ggw~~~~~~~~f~~ya~~~~~r~g 145 (423)
T 1vff_A 75 R-LFPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHF-------TSPLWFMKKGGFLREENLKHWEKYIEKVAELLE 145 (423)
T ss_dssp H-HCSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSGGGHHHHHHHHHHHHHHTT
T ss_pred H-hCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccCC-------cccHHHHhcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4 45655 57889999999999999999999999999974 211100011358889999999999999999999
Q ss_pred CCCcEEEEEeccCCCCC-------CC---CcccHHHHH----------HHHHHHHHhhCCCcEEEEeCCC---CCCCchh
Q 009560 330 KHPALLGIELLNEPSAA-------TV---PLDILVPYY----------KQGYQIVRKYSPTAYVIVCQRI---GNADPLE 386 (532)
Q Consensus 330 ~~p~v~g~EL~NEP~~~-------~~---~~~~l~~~~----------~~~~~aIR~~~~~~~Viv~~~~---~~~~~~~ 386 (532)
+ |..|+++|||... +. ........+ ..+++++|+ +...-+++...+ .+.++.+
T Consensus 146 d---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~ll~Aha~Av~~~r~-~~~iG~~~~~~~~~P~~~~~~d 221 (423)
T 1vff_A 146 K---VKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKAFKVAANLLKAHAIAYELLHG-KFKVGIVKNIPIILPASDKERD 221 (423)
T ss_dssp T---CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECCEEEESSSSHHH
T ss_pred C---CceEEEecCcchhhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCceEEEEeCCceecCCCCHHH
Confidence 8 6679999999731 00 111122222 345666777 433333333211 0112211
Q ss_pred ---------h-----hhc------c--------CCCCcEEEEeeecccCCCcc----c---------c---CC--hhhhH
Q 009560 387 ---------L-----YQA------N--------IGLHNIVVDLHYYNLFDTFF----V---------N---MS--TVDNI 420 (532)
Q Consensus 387 ---------~-----~~~------~--------~~~~nvv~s~H~Y~~f~~~~----~---------~---~~--~~~~i 420 (532)
+ ++. | ...+-..+.+|+|.+..... . + .. ..|.+
T Consensus 222 ~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i 301 (423)
T 1vff_A 222 RKAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSV 301 (423)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHCEEECSSCEEECCCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCC
T ss_pred HHHHHHHHHHHHHHHhhHhhccccchhcCccHhhcCCCCEEEEccccceeeeccCCCCCccccccCCCCCCCCCCCCCcc
Confidence 1 111 0 03345788999997631100 0 0 00 01111
Q ss_pred --HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHH----HHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 421 --LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDY----QDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 421 --~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~----~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
.-++ ..+..+ ++.+.||+|+|.|..... .+.. +.+++++..+.+. .-.|.+.|++-.. -.|.
T Consensus 302 ~P~gl~----~~L~~~-~rY~~Pi~ITENG~~~~d----D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn-~eW~ 371 (423)
T 1vff_A 302 YPKGIY----MALKKA-SRYGRPLYITENGIATLD----DEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMDN-YEWK 371 (423)
T ss_dssp CTHHHH----HHHHHH-GGGCSCEEEEECCCCCSC----HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC-CCGG
T ss_pred CHHHHH----HHHHHH-HHcCCCEEEEeCCCCCCc----cHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCcc-cccc
Confidence 1222 334445 555569999999986421 2333 3444444455543 2269999999873 3477
Q ss_pred hHhhHhCCcccCC
Q 009560 493 FEWNIRNNYLQLG 505 (532)
Q Consensus 493 ~~~~~~~g~~~~~ 505 (532)
.....+-|++-.+
T Consensus 372 ~gy~~RfGl~~VD 384 (423)
T 1vff_A 372 EGFGPRFGLVEVD 384 (423)
T ss_dssp GTTCCCCCSEEEC
T ss_pred cCCCCCCcEEEec
Confidence 6556677777533
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-16 Score=160.93 Aligned_cols=244 Identities=17% Similarity=0.195 Sum_probs=166.9
Q ss_pred HHHhhccccCC-----HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 217 VLKRHRNTFIT-----IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 217 ~~~~hw~t~it-----e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
.++++..+|.+ +++++.||++|+|+|||.+ | .+|.++ . ..+++++++++.|+++||+|+||+|..+
T Consensus 14 ~~e~~g~~~~~~~G~~~~~~~ilk~~G~n~vRlri--~--v~P~~g-~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd- 84 (334)
T 1fob_A 14 LLEDEGYSYKNLNGQTQALETILADAGINSIRQRV--W--VNPSDG-S---YDLDYNLELAKRVKAAGMSLYLDLHLSD- 84 (334)
T ss_dssp HHHHTTCCCBCTTSCBCCHHHHHHHHTCCEEEEEE--C--SCCTTC-T---TCHHHHHHHHHHHHHTTCEEEEEECCSS-
T ss_pred HHHHcCCEEECCCCCCchHHHHHHHcCCCEEEEEE--E--ECCCCC-c---cCHHHHHHHHHHHHHCCCEEEEEeccCC-
Confidence 45666666665 5799999999999999976 3 355432 1 2589999999999999999999999741
Q ss_pred CCCCCCCCCCCCCCCCCCCh---hhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCCC-------CcccHHHHHHHH
Q 009560 292 SQNGMEHSASRDGTTDWPAS---DYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAATV-------PLDILVPYYKQG 360 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~---~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~~-------~~~~l~~~~~~~ 360 (532)
.|..++....+..|.+. +..+++.++-+.+++++++.. .+-.+++.|||...-+ ..+.+.++..++
T Consensus 85 ---~wadP~~q~~p~~W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a 161 (334)
T 1fob_A 85 ---TWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSG 161 (334)
T ss_dssp ---SCCBTTBCBCCTTSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHH
T ss_pred ---CCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHH
Confidence 12222222234467653 467788888888889988753 2335789999976321 356889999999
Q ss_pred HHHHHhhC--CCcEEEEeCCCCCCCc---hhhhhc-c-CC-C---CcEEEEeeecccCCCccccCChhhhHHHHHHHHHH
Q 009560 361 YQIVRKYS--PTAYVIVCQRIGNADP---LELYQA-N-IG-L---HNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREA 429 (532)
Q Consensus 361 ~~aIR~~~--~~~~Viv~~~~~~~~~---~~~~~~-~-~~-~---~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~ 429 (532)
+++||+++ |..+|+++-..+ .+. ..++.. . .+ . +-.++.+|+|+.|... .+. ..+. +
T Consensus 162 ~~avr~~~~~p~~~v~~h~~~~-~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~---~~~----~~l~----~ 229 (334)
T 1fob_A 162 AWGVKDSNLATTPKIMIHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---ATL----ASLK----T 229 (334)
T ss_dssp HHHHHTSCCSSCCEEEEEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CCH----HHHH----H
T ss_pred HHHHHHhccCCCCeEEEEcCCc-CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCC---CCH----HHHH----H
Confidence 99999999 987887763221 121 112211 0 12 2 6789999999865421 112 2222 3
Q ss_pred HHHHHHhcCCCcEEEeccCcccCCC-------------CCCHHHHHHHHHHHHHHHHhC--CCcEEEEcc
Q 009560 430 QLQALNNANGPLVFIGEWVNEWNVT-------------SGTQKDYQDFGSAQLEVYNAA--SFGWAYWTL 484 (532)
Q Consensus 430 ~~~~~~~~~g~pv~vGEwG~~~~~~-------------~a~~~~~~~~~~~ql~~~~~~--~~Gw~yW~~ 484 (532)
.+..+.++.++||+|.|.|..+..+ ..+.+....|+++.++...+. +.|.+||+.
T Consensus 230 ~l~~~~~rygKpv~itEtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~ 299 (334)
T 1fob_A 230 SLANLQSTYDKPVVVVETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP 299 (334)
T ss_dssp HHHHHHHHHCCCEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred HHHHHHHHHCCCEEEEEcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECc
Confidence 3444555568999999999876422 134666788999988888764 679999986
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-17 Score=176.86 Aligned_cols=311 Identities=15% Similarity=0.162 Sum_probs=195.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||++++.... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 11 wG~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~----~~~~~~~~~~a~d~Yh~y------~eDi~lm~~~G~~~~R~si 79 (447)
T 1e4i_A 11 WGTATAAYQIEGAYQEDGRGLSIWDTFAHT-PG----KVFNGDNGNVACDSYHRY------EEDIRLMKELGIRTYRFSV 79 (447)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT----TSGGGCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeeeCcHHhhCCCcCCCCCcCceeeEcccC-CC----cccCCCCCccccchhhcc------HHHHHHHHHcCCCeEEecC
Confidence 34567889999999 555 9999975432 11 122333446788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|...+.+++..++.++++|+.|.++||.+||+||+. +.+........|.+++..+.+.++++.+++
T Consensus 80 ~W~R-i~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~l~~~ggw~~r~~~~~F~~ya~~~~~ 151 (447)
T 1e4i_A 80 SWPR-IFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW-------DLPQALQDAGGWGNRRTIQAFVQFAETMFR 151 (447)
T ss_dssp CHHH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTTTSSTHHHHHHHHHHHHHHH
T ss_pred cHHH-hccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cccHHHHhcCCCCCchhHHHHHHHHHHHHH
Confidence 9854 45553457788999999999999999999999999873 222111113468899999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCCc--------ccHHHHHHHHHHHHHhhCCCcEEEEe-C-CC---CC
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVPL--------DILVPYYKQGYQIVRKYSPTAYVIVC-Q-RI---GN 381 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~~--------~~l~~~~~~~~~aIR~~~~~~~Viv~-~-~~---~~ 381 (532)
||++. |..|.++|||.. ++... ..+.....++++++|+.+|+..|-+. + .+ .+
T Consensus 152 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~ 229 (447)
T 1e4i_A 152 EFHGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPYS 229 (447)
T ss_dssp HTBTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEECBCCCEEESS
T ss_pred HhCCc--ceeEEEecCccccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCceeecCC
Confidence 99986 666889999974 11110 11222235677888999888655432 1 11 00
Q ss_pred CCc---------hhh-----hhc------c-----------------------CCCCcEEEEeeecccCCCccc----c-
Q 009560 382 ADP---------LEL-----YQA------N-----------------------IGLHNIVVDLHYYNLFDTFFV----N- 413 (532)
Q Consensus 382 ~~~---------~~~-----~~~------~-----------------------~~~~nvv~s~H~Y~~f~~~~~----~- 413 (532)
.++ ..+ ++. | ...+-..+.+.+|.+..-... +
T Consensus 230 ~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~~~~p~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~ 309 (447)
T 1e4i_A 230 TSEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQDGDMDIIGEPIDMIGINYYSMSVNRFNPEAGFL 309 (447)
T ss_dssp SCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHHHTTCCCCCCTTHHHHHTCCCSEEEEECCCCEEEEECTTSTTT
T ss_pred CCHHHHHHHHHHHHHHhhhhhhhhcCCCCCHHHHHHHhhccccCCCCHHHHHHhcCCCCeeEeccccCeEeecCCCCCCC
Confidence 111 000 000 0 012347888888876311000 0
Q ss_pred ----C-------ChhhhH--HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC----CCHHH----HHHHHHHHHHHH
Q 009560 414 ----M-------STVDNI--LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS----GTQKD----YQDFGSAQLEVY 472 (532)
Q Consensus 414 ----~-------~~~~~i--~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~----a~~~~----~~~~~~~ql~~~ 472 (532)
. ...|.+ .-++ ..+..+.+.+.+||+|+|-|....... -..+. ++++++++..+.
T Consensus 310 ~~~~~~~~~~~t~~gW~i~P~Gl~----~~L~~~~rY~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~~Ai 385 (447)
T 1e4i_A 310 QSEEINMGLPVTDIGWPVESRGLY----EVLHYLQKYGNIDIYITENGACINDEVVNGKVQDDRRISYMQQHLVQVHRTI 385 (447)
T ss_dssp TEEECCCCCCBCTTSCBCCTHHHH----HHHHHGGGGCSCCEEEEEECCCCCCCCBTTBCCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCCCcCCcCChHHHH----HHHHHHHhcCCCCEEEEecCCCcccccccCCcccHHHHHHHHHHHHHHHHHH
Confidence 0 001111 1222 233344533358999999998643210 01122 344555555565
Q ss_pred Hh--CCCcEEEEcccCCCCCCchHhhHhCCcccCCC
Q 009560 473 NA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGN 506 (532)
Q Consensus 473 ~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~~ 506 (532)
+. .-.|.+.|++-.. -.|......+-|++--+.
T Consensus 386 ~dGv~v~GY~~Wsl~Dn-~eW~~gy~~RfGl~~VD~ 420 (447)
T 1e4i_A 386 HDGLHVKGYMAWSLLDN-FEWAEGYNMRFGMIHVDF 420 (447)
T ss_dssp HTTCCEEEEEEECSBCC-CCGGGGGGSCCCSEEECT
T ss_pred HCCCCEEEEEecCCccc-cccccCccCCCCeEEecC
Confidence 53 2369999999884 348777677788876433
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-17 Score=174.21 Aligned_cols=311 Identities=14% Similarity=0.139 Sum_probs=194.4
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.++.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 12 wG~Ataa~QiEGa~~~dGkg~siwD~~~~~-~~----~~~~~~~~~~a~d~Y~~~------~eDi~lm~~~G~~~~R~si 80 (453)
T 3ahx_A 12 FGTATAAYQIEGAYKEDEKGESIWDRFSHI-PG----NVAKMHNGDIACDHYHRY------KEDVQLLKSLGIKSYRFSI 80 (453)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeEeccHHhhCCCcCCCCCCCEeeEeeccc-CC----cccCCCCCcccccHHHHH------HHHHHHHHHhCCCeEeccc
Confidence 34567889999999 555 9999975432 11 122333346688888777 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|. .+.|...+.+++..++.+|++|+.|.++||.+||+||+. +.+........|.++...+.+.++++.+++
T Consensus 81 ~Ws-ri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~-------d~P~~l~~~ggw~~r~~~~~f~~ya~~~~~ 152 (453)
T 3ahx_A 81 AWP-RIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHW-------DLPQKLQDIGGWANPQVADYYVDYANLLFR 152 (453)
T ss_dssp CHH-HHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHH
T ss_pred CHH-HhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCC-------CccHhHhhCCCCCCchHHHHHHHHHHHHHH
Confidence 885 445653457788999999999999999999999999874 222111112468899999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------CC---CcccHHHHH----------HHHHHHHHhhCCCcEEEE--eCCC---CC
Q 009560 327 RYAKHPALLGIELLNEPSAA-------TV---PLDILVPYY----------KQGYQIVRKYSPTAYVIV--CQRI---GN 381 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~~---~~~~l~~~~----------~~~~~aIR~~~~~~~Viv--~~~~---~~ 381 (532)
||++. |..|.++|||... +. ........+ .++++++|+.+|+..|-+ ...+ .+
T Consensus 153 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~ 230 (453)
T 3ahx_A 153 EFGDR--VKTWITHNEPWVASYLGYALGVHAPGIKDMKMALLAAHNILLSHFKAVKAYRELEQDGQIGITLNLSTCYSNS 230 (453)
T ss_dssp HHTTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEECCCEEESS
T ss_pred HhCCc--cceEEEccCcchhhccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCceeecCC
Confidence 99987 5668899999741 00 111223333 467788999988755432 2111 01
Q ss_pred CCch---------hh---------------------h-h---cc---------CCCCcEEEEeeecccCCCccc------
Q 009560 382 ADPL---------EL---------------------Y-Q---AN---------IGLHNIVVDLHYYNLFDTFFV------ 412 (532)
Q Consensus 382 ~~~~---------~~---------------------~-~---~~---------~~~~nvv~s~H~Y~~f~~~~~------ 412 (532)
.++. .+ + . .+ ...+-..+.+.+|.+..-...
T Consensus 231 ~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~~ 310 (453)
T 3ahx_A 231 ADEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFLGINYYTRQVVKNNSEAFIG 310 (453)
T ss_dssp SSHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHHHTTCCCCCCTTTTTTTCCCCSEEEEECCCCEEEEECTTSGGG
T ss_pred CCHHHHHHHHHHHHHHhHHHhHHhhCCCCCHHHHHHHHhcCCCCCCCHHHHHHhhcCCCEEEeccccceEEecCCCCCCC
Confidence 1110 00 0 0 00 111247888999976311000
Q ss_pred --cC-------ChhhhH--HHHHHHHHHHHHHHHhc-CCCcEEEeccCcccCC-C---C-CCHHH----HHHHHHHHHHH
Q 009560 413 --NM-------STVDNI--LFIYKSREAQLQALNNA-NGPLVFIGEWVNEWNV-T---S-GTQKD----YQDFGSAQLEV 471 (532)
Q Consensus 413 --~~-------~~~~~i--~~i~~~~~~~~~~~~~~-~g~pv~vGEwG~~~~~-~---~-a~~~~----~~~~~~~ql~~ 471 (532)
.. ...|.+ .-++ ..+..+.++ +.+||+|+|-|..... . + -..+. ++.+++++..+
T Consensus 311 ~~~~~~~~~~t~~gW~i~P~gl~----~~L~~~~~rY~~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~A 386 (453)
T 3ahx_A 311 AESVAMDNPKTEMGWEIYPQGLY----DLLTRIHRDYGNIDLYITENGAAFNDMVNRDGKVEDENRLDYLYTHFAAALSA 386 (453)
T ss_dssp EEECCCSSCBCTTCCBCCHHHHH----HHHHHHHHHHTTCEEEEEEECCCCCCCCCTTSCBCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcCCCCCccChHHHH----HHHHHHHHHcCCCCEEEEecCCCCCCccccCCCcCcHHHHHHHHHHHHHHHHH
Confidence 00 001111 1222 223333333 3489999999986432 0 0 00122 34555556666
Q ss_pred HHh--CCCcEEEEcccCCCCCCchHhhHhCCcccCCC
Q 009560 472 YNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGN 506 (532)
Q Consensus 472 ~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~~ 506 (532)
.+. .-.|.+.|++-.. -.|......+-|++--+.
T Consensus 387 i~dGv~v~GY~~WSl~Dn-~eW~~gy~~RfGl~~VD~ 422 (453)
T 3ahx_A 387 IEAGVPLKGYYIWSFMDN-FEWAEGYEKRFGIVHVNY 422 (453)
T ss_dssp HHTTCCEEEEEEECSBCC-CCGGGGGGCCCCSEEECT
T ss_pred HHCCCCEEEEEeCCCccc-cccccCccCcCCeEEEeC
Confidence 653 2369999999884 348777777888876433
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.4e-17 Score=175.00 Aligned_cols=133 Identities=16% Similarity=0.182 Sum_probs=105.0
Q ss_pred CCceeeecccCccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCC
Q 009560 41 GGWLVIEGWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQG 120 (532)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~ 120 (532)
.|=||.++ =.+..|...+ .+ .+|+||| .+|||||+++++|.-++++++.++.||+|.|++ ++++|+||+.||
T Consensus 199 dg~L~~~p-~~~~~ftl~~----~~-g~vAlks-~~GkYL~~~g~~g~L~~~~~~~~g~~E~F~L~~-~~~qVaL~s~ng 270 (493)
T 3llp_A 199 DGRLVARP-EPATGYTLEF----RS-GKVAFRD-CEGRYLAPSGPSGTLKAGKATKVGKDELFALEQ-SCAQVVLQAANE 270 (493)
T ss_dssp TSCEESSC-CGGGCBEEEE----C---CEEEEC-TTSCBEEEETTTTEEEECC---CCGGGCEEEEE-CCCEEEEECTTS
T ss_pred CCccccCC-CcccEEEEEE----eC-CEEEEEe-CCCCEEeEECCCCeEEeccCCCCCCceEEEEEe-CCCEEEEEecCC
Confidence 33444443 2344566444 24 6899999 999999999865555458999999999999887 788999999999
Q ss_pred eEEEEeCCCceEEEeecCCCCCceEEEEEcC-CCcEEEEecCCceEEeccCceEEeCCCCCCC
Q 009560 121 QFLTCDGEGCVVSATAKSPSTPETFEIERNN-DSRVHIKLKSGTYLQATLGNQLTSDYPGMPG 182 (532)
Q Consensus 121 ~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~-~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~~ 182 (532)
+||++++++. |+|+++.|++||+|+++++. +++++||+.||+||++++.+.|.|+....+.
T Consensus 271 kyVsa~~gg~-l~An~~~~~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~~g~v~a~~~~~g~ 332 (493)
T 3llp_A 271 RNVSTRQGMD-LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNA 332 (493)
T ss_dssp CEEECC-CCC-CEEEESCCSGGGCEEEEECTTTCCEEEECTTSCEEEECTTSBEEEEESSCCG
T ss_pred cEEEecCCce-EEeeCCCCCCcEEEEEEEeCCCCEEEEEeCCCCEEEEeCCCcEEeccCCCCC
Confidence 9999998874 99999999999999999997 4899999999999999998888887665443
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.70 E-value=7.7e-17 Score=171.55 Aligned_cols=185 Identities=14% Similarity=0.140 Sum_probs=132.3
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 11 wG~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~----~~~~~~~~~~a~d~Y~~~------~eDi~lm~~~G~~~~R~si 79 (449)
T 1qox_A 11 WGVATAAYQIEGAYNEDGRGMSIWDTFAHT-PG----KVKNGDNGNVACDSYHRV------EEDVQLLKDLGVKVYRFSI 79 (449)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHS-TT----TSGGGCCTTTTTCTTSCH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeeeCcHHHhCCCcCCCCCCCEeeEEeccc-CC----cccCCCCCccccchhhhh------HHHHHHHHhcCCCeEEecC
Confidence 34567889999999 555 9999975432 11 012222335566555554 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|...+.+++..++.+|++|+.|.++||.+||+||+. +.+........|.++...+.+.++++.+++
T Consensus 80 ~W~r-i~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~-------d~P~~l~~~ggw~~r~~~~~f~~ya~~~~~ 151 (449)
T 1qox_A 80 SWPR-VLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHW-------DLPQALQDQGGWGSRITIDAFAEYAELMFK 151 (449)
T ss_dssp CHHH-HSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTHHHHHHHHHHHHHHH
T ss_pred cHHH-hCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCCC-------cccHHHHhcCCCCCchHHHHHHHHHHHHHH
Confidence 8854 45653457788999999999999999999999999874 222111112368889999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCC-c-------ccHHHHHHHHHHHHHhhCCCcEEEE
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVP-L-------DILVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~-~-------~~l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
||++. |..|.++|||.. ++.. . ..+.....++++++|+..|+..|-+
T Consensus 152 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 218 (449)
T 1qox_A 152 ELGGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGI 218 (449)
T ss_dssp HHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HhCCC--CceEEEccCCcceeccccccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 99987 556889999974 1111 0 1122223557788899988865544
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-17 Score=172.26 Aligned_cols=310 Identities=12% Similarity=0.117 Sum_probs=192.6
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 20 wG~Ataa~QiEGa~~edGkg~siwD~~~~~-~~----~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~~R~si 88 (454)
T 2o9p_A 20 WGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PG----KVIGGDCGDVACDHFHHF------KEDVQLMKQLGFLHYRFSV 88 (454)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHTTS-TT----SSGGGCCSSSTTCHHHHH------HHHHHHHHTTTCCEEEEEC
T ss_pred EeeeCchhhcCCCcCCCCCcCchheeeccC-CC----cccCCCCCccccchHHHH------HHHHHHHHhcCCceEEecc
Confidence 45567889999999 555 9999974432 11 122333446788888777 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|.+ +.+++.+++.+|++|+.|.++||.+||+||+. +.+........|.++...+.+.++++.+++
T Consensus 89 sWsR-i~P~~-g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~ggw~~r~~~~~F~~ya~~~~~ 159 (454)
T 2o9p_A 89 AWPR-IMPAA-GIINEEGLLFYEHLLDEIELAGLIPMLTLYHW-------DLPQWIEDEGGWTQRETIQHFKTYASVIMD 159 (454)
T ss_dssp CHHH-HCSST-TCCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHH
T ss_pred cHHh-hCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEecCC-------CccHHHHhcCCCCCcchHHHHHHHHHHHHH
Confidence 8854 45554 47788899999999999999999999999874 221111111368889999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCC-c-------ccHHHHHHHHHHHHHhhCCCcEEEE--eCCC---CC
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVP-L-------DILVPYYKQGYQIVRKYSPTAYVIV--CQRI---GN 381 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~-~-------~~l~~~~~~~~~aIR~~~~~~~Viv--~~~~---~~ 381 (532)
||++. |..|.++|||.. ++.. . ..+.....++++++|+.+|+..|-+ ...+ .+
T Consensus 160 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~~~~~~~~P~~ 237 (454)
T 2o9p_A 160 RFGER--INWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGITLNMEHVDAAS 237 (454)
T ss_dssp HSSSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEECCEEEESS
T ss_pred HhCCc--ceeEEEecCcceecccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEeecCceeecCC
Confidence 99987 556889999974 1111 0 0112223557788899988754433 2111 01
Q ss_pred CCc---------hhh-------------------------h---h-cc------CCCCcEEEEeeecccCCCcc-c--c-
Q 009560 382 ADP---------LEL-------------------------Y---Q-AN------IGLHNIVVDLHYYNLFDTFF-V--N- 413 (532)
Q Consensus 382 ~~~---------~~~-------------------------~---~-~~------~~~~nvv~s~H~Y~~f~~~~-~--~- 413 (532)
.++ ..+ + . +. ...+-..+.+.+|.+..-.. . .
T Consensus 238 ~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~~p~~~~~~~~d~~~i~~~~DfiGiNyY~~~~v~~~~~~~~ 317 (454)
T 2o9p_A 238 ERPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDFLGINYYTRSIIRSTNDASL 317 (454)
T ss_dssp SCHHHHHHHHHHHHHHTHHHHHHHHHSSCCHHHHHHHGGGGGGGTTCCTTHHHHHCCCTTEEEEECCCEEEEEECCSSSS
T ss_pred CCHHHHHHHHHHHHHHhhhhhHHhhCCCCChHHHHHHHhhcCcccCCCHHHHHHhcCCCCEEEEccccceEEeccCCCCC
Confidence 111 000 0 0 00 01224678888887631100 0 0
Q ss_pred ---------C---ChhhhH--HHHHHHHHHHHHHHHhcCC--CcEEEeccCcccCCC---C-CCHHHH----HHHHHHHH
Q 009560 414 ---------M---STVDNI--LFIYKSREAQLQALNNANG--PLVFIGEWVNEWNVT---S-GTQKDY----QDFGSAQL 469 (532)
Q Consensus 414 ---------~---~~~~~i--~~i~~~~~~~~~~~~~~~g--~pv~vGEwG~~~~~~---~-a~~~~~----~~~~~~ql 469 (532)
. ...|.+ .-++ ..+..+.++.+ +||+|+|-|...... + -..+.+ +.+++++.
T Consensus 318 ~~~~~~~~~~~~t~~gW~i~P~Gl~----~~L~~~~~rY~~~~Pi~ITENG~~~~d~~~~g~v~D~~Ri~yl~~hl~~~~ 393 (454)
T 2o9p_A 318 LQVEQVHMEEPVTDMGWEIHPESFY----KLLTRIEKDFSKGLPILITENGAAMRDELVNGQIEDTGRQRYIEEHLKACH 393 (454)
T ss_dssp SCEEECCCCSSBCTTSCBCCHHHHH----HHHHHHHHTTTTTSCEEEEEECCCCCCCEETTEECCHHHHHHHHHHHHHHH
T ss_pred CcccccCCCCccCCCCCccChHHHH----HHHHHHHHHhCCCCCEEEEeccCCccCCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 0 001111 1222 23444555555 899999999864211 0 011223 44455555
Q ss_pred HHHHh--CCCcEEEEcccCCCCCCchHhhHhCCcccCCC
Q 009560 470 EVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGN 506 (532)
Q Consensus 470 ~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~~ 506 (532)
.+.+. .-.|.+.|++-.. -.|......+-|++--+.
T Consensus 394 ~Ai~dGv~v~GY~~WSl~Dn-~eW~~gy~~RfGl~~VD~ 431 (454)
T 2o9p_A 394 RFIEEGGQLKGYFVWSFLDN-FEWAWGYSKRFGIVHINY 431 (454)
T ss_dssp HHTTTTCCEEEEEEECSBCC-CCGGGGGGSCCCSEEECT
T ss_pred HHHHCCCCEEEEEeCCcccc-cccccCccCcCceEEEeC
Confidence 55542 2259999999884 348776677778876433
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=170.01 Aligned_cols=183 Identities=16% Similarity=0.153 Sum_probs=132.9
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ .+.++-..+.|.+.++.+ ++|++.||++|+|++|++|
T Consensus 24 wG~Atsa~QiEGa~~~dGkg~siwD~~~~~~~-----~~~~~~~~~~a~D~Yh~y------~eDi~lm~~lG~~~yRfsI 92 (479)
T 1gnx_A 24 WGSATASYQIEGAAAEDGRTPSIWDTYARTPG-----RVRNGDTGDVATDHYHRW------REDVALMAELGLGAYRFSL 92 (479)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHTSTT-----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCSEEEEEC
T ss_pred EEEeccHHHhCCCcCCCCCcCeeeEEeccCCC-----cccCCCCCccccchhhcC------HHHHHHHHHcCCCEEEecc
Confidence 45567889999999 555 999997544311 122222346788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|.+.+..++..+++++++|+.|.++||.+||+|||. +.+........|.+++..+.++++++.+++
T Consensus 93 sWsRI-~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~GGw~~r~~v~~F~~ya~~~~~ 164 (479)
T 1gnx_A 93 AWPRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW-------DLPQELENAGGWPERATAERFAEYAAIAAD 164 (479)
T ss_dssp CHHHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTCTTSTHHHHHHHHHHHHHHH
T ss_pred cHHHh-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cccHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 98544 4544345678899999999999999999999999873 222111112469999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCCC-c-------ccHHHHHHHHHHHHHhhC-CCcEE
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATVP-L-------DILVPYYKQGYQIVRKYS-PTAYV 373 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~~-~-------~~l~~~~~~~~~aIR~~~-~~~~V 373 (532)
||++. |..|.++|||.. ++.. . ..+.....++++++|+.+ |+..|
T Consensus 165 ~~gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~lllAha~Av~~~r~~~~~~~~I 230 (479)
T 1gnx_A 165 ALGDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQC 230 (479)
T ss_dssp HHTTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred HhCCc--ceeEEEecCcchhhhhhhccCcCCCCccChHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeE
Confidence 99985 455889999974 1111 0 012223346778889988 77543
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.8e-17 Score=171.00 Aligned_cols=184 Identities=15% Similarity=0.118 Sum_probs=136.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ ||+++......+ .+.++-..+.|.+.++.+ ++|++.||++|+|++|++|
T Consensus 19 wG~Ataa~QiEGa~~~dGkg~SiwD~~~~~~~-----~i~~~~~~~~a~D~Yhry------~eDi~Lm~elG~~~yRfSI 87 (458)
T 3ta9_A 19 WGAATSSYQIEGAFNEDGKGESIWDRFSHTPG-----KIENGDTGDIACDHYHLY------REDIELMKEIGIRSYRFST 87 (458)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTSTT-----SSGGGCCTTTTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEEchhhhhCCCcCCCCCccchhhhhhccCC-----cccCCCCCccccchHHhH------HHHHHHHHHcCCCEEEecC
Confidence 45567889999999 555 999997553211 122333457788888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|++.+.+++..++.++++|+.|.++||.++|+|+|. +.+........|.+++..+.++++.+.+++
T Consensus 88 sWsRI-~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~-------dlP~~L~~~GGW~nr~~v~~F~~YA~~~f~ 159 (458)
T 3ta9_A 88 SWPRI-LPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHW-------DLPQALQDKGGWTNRDTAKYFAEYARLMFE 159 (458)
T ss_dssp CHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHH
T ss_pred cHHHh-CcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCC-------CCCHhHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 98544 5554456788899999999999999999999999983 333222233579999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------C-C--CcccHHHH----------HHHHHHHHHhhCCCcEEE
Q 009560 327 RYAKHPALLGIELLNEPSAA-------T-V--PLDILVPY----------YKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~-~--~~~~l~~~----------~~~~~~aIR~~~~~~~Vi 374 (532)
||++.... |-++|||... + . ........ ..++++++|+..|+..|-
T Consensus 160 ~fgdrVk~--W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~IG 225 (458)
T 3ta9_A 160 EFNGLVDL--WVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIG 225 (458)
T ss_dssp HTTTTCCE--EEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEE
T ss_pred HhcCcCCE--EEEecCcchhhcccccccccCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence 99997665 5599999741 0 0 11122222 334677888988875543
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-16 Score=165.44 Aligned_cols=183 Identities=17% Similarity=0.222 Sum_probs=135.1
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+++......+ .+.++...+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 11 wG~Ataa~QiEGa~~~dGkg~siwD~~~~~~~-----~~~~~~~~~~a~D~Yhry------~eDi~l~~~lG~~~~R~si 79 (444)
T 4hz8_A 11 WGAATSSYQIEGAWNEDGKGESIWDRFTRIPG-----KIKNGDSGDVACDHYHRY------EQDLDLMRQLGLKTYRFSI 79 (444)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHTTSTT-----SSGGGCCTTTTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEEchHHhhCCCcCCCCCcCchhhhhhcCCC-----cccCCCCCccccchhhhH------HHHHHHHHhcCCCEEEEec
Confidence 45567889999999 555 999997543211 122333457788888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|.+.++.++..++.+|++|+.|.++||.+||+|||. +.+........|.+++..+.++++.+.+++
T Consensus 80 ~W~Ri-~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~-------dlP~~L~~~GGW~nr~~v~~F~~Ya~~~~~ 151 (444)
T 4hz8_A 80 AWARI-QPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHW-------DLPQWVEDEGGWLSRESASRFAEYTHALVA 151 (444)
T ss_dssp CHHHH-SCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHH
T ss_pred cHHHc-CcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCHHHhhCcCCCChHHHHHHHHHHHHHHH
Confidence 98544 5554356688899999999999999999999999983 332211112469999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC------------CCC-Ccc-------cHHHHHHHHHHHHHhhCCC-cEE
Q 009560 327 RYAKHPALLGIELLNEPSA------------ATV-PLD-------ILVPYYKQGYQIVRKYSPT-AYV 373 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~------------~~~-~~~-------~l~~~~~~~~~aIR~~~~~-~~V 373 (532)
||++.... |.++|||.. ++. +.. .+.....++++++|+..|+ ..|
T Consensus 152 ~~gdrVk~--W~T~NEp~~~~~~gy~~g~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~i 217 (444)
T 4hz8_A 152 ALGDQIPL--WVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQM 217 (444)
T ss_dssp HHGGGCSE--EEEEECHHHHHHHHHTSCSSTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHHCCTTCEE
T ss_pred HhCccCCe--EEEccCcchhhhccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccCeE
Confidence 99997555 669999974 111 111 1222334577888999887 443
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.4e-16 Score=166.66 Aligned_cols=178 Identities=13% Similarity=0.188 Sum_probs=133.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... .. +-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 11 wG~Atsa~QiEGa~~edGkg~siwD~~~~~-~~--------~~~~~~a~D~Yh~y------~eDi~lm~~~G~~~~R~si 75 (468)
T 1pbg_A 11 FGGATAAYQAEGATHTDGKGPVAWDKYLED-NY--------WYTAEPASDFYHKY------PVDLELAEEYGVNGIRISI 75 (468)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHT-TC--------SCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred eeeeCchhccCCCcCCCCCccchhhhhhcC-Cc--------CCCccccccccccC------HHHHHHHHHhCCCEEEecc
Confidence 34567889999999 666 9999975542 11 12346788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|.+.+.+++..++.++++|+.+.++||.+||+|||. +.+........|.++...+.++++.+.+++
T Consensus 76 sWsR-i~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~ggw~~r~~~~~F~~ya~~~~~ 147 (468)
T 1pbg_A 76 AWSR-IFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDFLNRENIEHFIDYAAFCFE 147 (468)
T ss_dssp CHHH-HSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHH
T ss_pred CHhh-hccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------ccCHHHHhcCCCCChHHHHHHHHHHHHHHH
Confidence 9854 45554456788899999999999999999999999874 222111112368899999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------CC---Ccc-cHHHHH----------HHHHHHHHhhCCCcEE
Q 009560 327 RYAKHPALLGIELLNEPSAA-------TV---PLD-ILVPYY----------KQGYQIVRKYSPTAYV 373 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~~---~~~-~l~~~~----------~~~~~aIR~~~~~~~V 373 (532)
||++ |..|.++|||... +. ... ...+.+ .++++++|+.+|+..|
T Consensus 148 ~~gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 212 (468)
T 1pbg_A 148 EFPE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEI 212 (468)
T ss_dssp HCTT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred HhCC---CCEEEEecCchhhhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 9998 6668999999741 11 111 233444 3677889998887554
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.5e-15 Score=164.80 Aligned_cols=215 Identities=16% Similarity=0.181 Sum_probs=146.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||+.- . ++ . ++++++|.++||+|+.++|.. | . ....
T Consensus 347 ~~d~~~~k~~G~N~vR~~h-----~---p~---~-------~~~~~~cD~~Gi~V~~e~~~~-~----~-------~~~~ 396 (613)
T 3hn3_A 347 VKDFNLLRWLGANAFRTSH-----Y---PY---A-------EEVMQMCDRYGIVVIDECPGV-G----L-------ALPQ 396 (613)
T ss_dssp HHHHHHHHHHTCCEEECTT-----S---CC---C-------HHHHHHHHHHTCEEEEECSCB-C----C-------CSGG
T ss_pred HHHHHHHHHcCCCEEEccC-----C---CC---h-------HHHHHHHHHCCCEEEEecccc-c----c-------cccc
Confidence 6889999999999999831 1 11 1 267899999999999999752 1 0 0111
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~ 387 (532)
+.++...+.+.+.++.+.+|++++|+|++|++.|||... .+...++++++++.||+.||+++|+..... ++..
T Consensus 397 ~~~~~~~~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~~---~~~~~~~~~~l~~~~k~~DptRpv~~~~~~---~~~~- 469 (613)
T 3hn3_A 397 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPASH---LESAGYYLKMVIAHTKSLDPSRPVTFVSNS---NYAA- 469 (613)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCTT---SHHHHHHHHHHHHHHHHHCTTSCEEEEECS---CTTT-
T ss_pred ccChHHHHHHHHHHHHHHHHhCCCCeEEEEecccCcccc---cchHHHHHHHHHHHHHHhCCCCCEEEEccc---Cccc-
Confidence 224667788899999999999999999999999999742 345788999999999999999999884211 1110
Q ss_pred hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC-------CCCHHH
Q 009560 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT-------SGTQKD 460 (532)
Q Consensus 388 ~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~-------~a~~~~ 460 (532)
........|+++|.|..+..... ..+ .+.......+..+.+..++|++++|||+..... .-+.+.
T Consensus 470 --~~~~~~~Dv~~~n~Y~~wy~~~~--~~~----~~~~~l~~~~~~~~~~~~kPi~isE~G~~~~~g~~~~~~~~~seey 541 (613)
T 3hn3_A 470 --DKGAPYVDVICLNSYYSWYHDYG--HLE----LIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEY 541 (613)
T ss_dssp --CSSGGGCSSEEEECCBTTTBSTT--CGG----GHHHHHHHHHHHHHHHHCSCEEEEECCCCBCTTCCCSSCCTBSHHH
T ss_pred --cccccccceeEEeccccccCCCc--cHH----HHHHHHHHHHHHHHHhcCCCEEEEeeCCCCCCCcccCCCCCCCHHH
Confidence 00122345799999976422111 111 112222233444444447899999999863211 012344
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEcccCC
Q 009560 461 YQDFGSAQLEVYNA----ASFGWAYWTLKND 487 (532)
Q Consensus 461 ~~~~~~~ql~~~~~----~~~Gw~yW~~k~e 487 (532)
...|++.++.++.+ ..+|++.|++..-
T Consensus 542 Q~~~~~~~~~~~~~~~~~~~~G~~~W~~~Df 572 (613)
T 3hn3_A 542 QKSLLEQYHLGLDQKRRKYVVGELIWNFADF 572 (613)
T ss_dssp HHHHHHHHHHHHHTTTTTTEEEEEESCSBCB
T ss_pred HHHHHHHHHHHHHhhcccceEEEEEEEeeec
Confidence 45688888888865 4579999999873
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-15 Score=162.78 Aligned_cols=318 Identities=15% Similarity=0.109 Sum_probs=192.1
Q ss_pred CceEEeCCCCCCCC-CCC-CcceeeecccCC-CCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW-DDN-AATFEMAIVANN-LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W-~~~-ps~f~~~~~~~~-~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ ||+++....... +. =.+..+-.++.|.+.++.+ ++|++.|+++|+|++|+.+
T Consensus 10 wG~Atsa~Q~EGa~~~gkg~SiwD~~~~~~~~~~--~~~~~~~~~~~a~d~Y~~y------~eDi~l~~~lG~~~~R~si 81 (473)
T 3apg_A 10 FGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIA--SGLVSGDLPENGPAYWHLY------KQDHDIAEKLGMDCIRGGI 81 (473)
T ss_dssp EEEECCHHHHSCSSTTCCCCCHHHHHHHCHHHHH--TTSSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEecchhhhcCCcCCCCcCeeeEEcccCCCccc--cccccCCCCcccccchhHH------HHHHHHHHHcCCCEEEEec
Confidence 34467789999999 565 999997543210 00 0012223456788888777 9999999999999999999
Q ss_pred ccccccCCCCCC--CCC---------------------------cChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 247 GWWIAFDPDPPA--PFI---------------------------GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 247 ~ww~~~~~~~~~--~~~---------------------------~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
.|. .+.|.++. .++ +..++.++++|+.++++||++||+|++..--+ |-
T Consensus 82 ~Ws-RI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~~id~l~~~Gi~pivtL~H~~lP~--wl 158 (473)
T 3apg_A 82 EWA-RIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPL--WI 158 (473)
T ss_dssp CHH-HHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCCT--TT
T ss_pred chh-hccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCH--HH
Confidence 875 44565531 566 67899999999999999999999998742111 11
Q ss_pred C-CC------CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CCCc--ccHHHHH-
Q 009560 298 H-SA------SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TVPL--DILVPYY- 357 (532)
Q Consensus 298 ~-sg------~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~~~--~~l~~~~- 357 (532)
+ .+ .......|.++...+.+.++.+.+++||++. |..|.++|||... +..+ ......+
T Consensus 159 ~d~~~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~ 236 (473)
T 3apg_A 159 HDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDL--VDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEK 236 (473)
T ss_dssp BCHHHHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHH
T ss_pred HhCCCccccccCCccCCCCCccHHHHHHHHHHHHHHHhCCc--ceEEEEecCcchhhcccccccccCCCCCCcCHHHHHH
Confidence 1 01 0012236999999999999999999999986 5568899999631 1111 1122333
Q ss_pred ---------HHHHHHHHhhCCCcE-EEEeCCC---CC-CCchhhhh--------c-cC--CCCcEEEEeeecccCCCc--
Q 009560 358 ---------KQGYQIVRKYSPTAY-VIVCQRI---GN-ADPLELYQ--------A-NI--GLHNIVVDLHYYNLFDTF-- 410 (532)
Q Consensus 358 ---------~~~~~aIR~~~~~~~-Viv~~~~---~~-~~~~~~~~--------~-~~--~~~nvv~s~H~Y~~f~~~-- 410 (532)
.++++++|+..+..+ +++...+ .+ .++.+... + +. ...-..+.+++|....-.
T Consensus 237 a~h~lllAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~dp~~d~~~~DfiGiNyY~~~~v~~~ 316 (473)
T 3apg_A 237 AKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAK 316 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCSEEEEEEECCEEEESSGGGHHHHHHHHHHHHHHHHHHHHTTCCSCEEEECCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCeeecCCCCCHHHHHHHHHHhhhcCceeEecCCCCeeEEcCccceEEecC
Confidence 567778888744322 2222211 01 11111110 0 00 234567888888753100
Q ss_pred -----------cc---------cCC---hhhh--HHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHH
Q 009560 411 -----------FV---------NMS---TVDN--ILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFG 465 (532)
Q Consensus 411 -----------~~---------~~~---~~~~--i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~ 465 (532)
+. ... ..|. ..-++ ..+..+.++.+.||+|+|-|.....+.....-++.++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~----~~L~~~~~rY~~Pi~ITENG~~~~~D~~Ri~yl~~hl 392 (473)
T 3apg_A 317 DGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLE----NLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHL 392 (473)
T ss_dssp SSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCCHHHHH----HHHHHHHHHHCCCEEEEECCCCCTTCSSHHHHHHHHH
T ss_pred CccccCCCCcccccccccccCCCCCcCCCCCcccHHHHH----HHHHHHHHHhCCeEEEEecCCCCCCchHHHHHHHHHH
Confidence 00 000 0011 11222 2233343444559999999986432222233456677
Q ss_pred HHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCcccCC
Q 009560 466 SAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQLG 505 (532)
Q Consensus 466 ~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~ 505 (532)
+++..+.+. .-.|.+.|++-.+ -.|...-..+-|++--+
T Consensus 393 ~~~~~Ai~dGv~V~GY~~WSl~Dn-~EW~~Gy~~RfGL~~VD 433 (473)
T 3apg_A 393 KAVYNAMKEGADVRGYLHWSLTDN-YEWAQGFRMRFGLVYVD 433 (473)
T ss_dssp HHHHHHHTTTCCEEEEEESCSBCC-CCGGGGGGSCCCSEEEC
T ss_pred HHHHHHHHcCCCEEEEEEeccccc-CcccccccCcCCeEEec
Confidence 777777753 2259999999883 44776666777777543
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.5e-14 Score=157.70 Aligned_cols=278 Identities=17% Similarity=0.174 Sum_probs=164.1
Q ss_pred hhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcC-CCCC-C---CC
Q 009560 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLH-AAPG-S---QN 294 (532)
Q Consensus 220 ~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH-~~pG-s---qn 294 (532)
+||+....++|++.||++|+|+||+++..|...+|.++ .|+ ++.||++++.|+++||+||++++ ..+. . +.
T Consensus 9 e~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g-~~d---~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~ 84 (645)
T 1kwg_A 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPG-RLE---WGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRY 84 (645)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTT-BCC---CHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCC-ccC---hHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcC
Confidence 35666677999999999999999999744566777654 453 67899999999999999999994 3221 0 00
Q ss_pred ----CCCCCCCCC-----CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC----CC------------
Q 009560 295 ----GMEHSASRD-----GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT----VP------------ 349 (532)
Q Consensus 295 ----~~~~sg~~~-----g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~----~~------------ 349 (532)
..+..|... ....+.++..++...++++.|++||+++|.|++|++.|||.... .+
T Consensus 85 P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~~~~~~~y~~~~~~~f~~wL~ 164 (645)
T 1kwg_A 85 PEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLE 164 (645)
T ss_dssp GGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTTTTSCCCSHHHHHHHHHHHH
T ss_pred CceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCCCCCCCcCCHHHHHHHHHHHH
Confidence 000011111 12234567889999999999999999999999999999997531 00
Q ss_pred --------------------------------------------------cccHHHHHHHHHHHHHhhCCCcEEEEeC-C
Q 009560 350 --------------------------------------------------LDILVPYYKQGYQIVRKYSPTAYVIVCQ-R 378 (532)
Q Consensus 350 --------------------------------------------------~~~l~~~~~~~~~aIR~~~~~~~Viv~~-~ 378 (532)
.+.+.++++...++||+++|+++|+..- +
T Consensus 165 ~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~~~~~~~ir~~~p~~pvt~n~~~ 244 (645)
T 1kwg_A 165 ARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTHNFMG 244 (645)
T ss_dssp HHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEECEECT
T ss_pred HHhcCHHHHHHHhCccccccccCcHhhcCCCCccCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEeECc
Confidence 0236778888999999999999876432 1
Q ss_pred -CCCCCchhhhhccCCCCcEEEEeeecccCCCcc----ccC-------ChhhhHHHHHHHHHHHHHHHHhcCCCcEEEec
Q 009560 379 -IGNADPLELYQANIGLHNIVVDLHYYNLFDTFF----VNM-------STVDNILFIYKSREAQLQALNNANGPLVFIGE 446 (532)
Q Consensus 379 -~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~----~~~-------~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGE 446 (532)
+...+...+. ..-.++++|.|+.+.... ... .......+..+ ....+ .+.|++|.|
T Consensus 245 ~~~~~d~~~~a-----~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~d----l~r~~---~~kP~~i~E 312 (645)
T 1kwg_A 245 FFTDLDAFALA-----QDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHD----LYRGV---GRGRFWVME 312 (645)
T ss_dssp TCCSSCHHHHG-----GGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHH----HHHHH---TTTCEEEEE
T ss_pred CCCCcCHHHHH-----hcCcEEEECCCCccccccccccccccccccccCchhHHHHHHH----HHHhh---cCCCEEEec
Confidence 1111211111 123478888886521110 000 00001111111 11112 137899999
Q ss_pred cCcc---cCCCC-CC-HHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchHhhHhCCcccCCCCCCcceeechhhHH
Q 009560 447 WVNE---WNVTS-GT-QKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGNSPNMQIFNSLVLLG 520 (532)
Q Consensus 447 wG~~---~~~~~-a~-~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~~~~~p~~~~~~~~~~~~ 520 (532)
++.. |...+ .. ....+.+. ...+....-+..||.|... ....|. ...|.++....| .+.|.....++
T Consensus 313 ~~~~~~~w~~~~~~~~pg~~r~~~---~~~~a~Ga~~~~~f~w~~~--~~~~E~-~~~g~l~~~g~~-~~~~~e~~~~~ 384 (645)
T 1kwg_A 313 QQPGPVNWAPHNPSPAPGMVRLWT---WEALAHGAEVVSYFRWRQA--PFAQEQ-MHAGLHRPDSAP-DQGFFEAKRVA 384 (645)
T ss_dssp ECCSCCSSSSSCCCCCTTHHHHHH---HHHHHTTCSCEEEECSBCC--SSSTTT-TSCCSBCTTSCB-CHHHHHHHHHH
T ss_pred CCCCCCCCccCCCCCCccHHHHHH---HHHHhcCCCEEEEeeeccC--CCCccc-ccccccCCCCCc-CHHHHHHHHHH
Confidence 9753 32211 11 11222221 2233445678999999874 223332 335566655444 34444444333
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.60 E-value=9e-16 Score=164.67 Aligned_cols=160 Identities=15% Similarity=0.169 Sum_probs=117.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCC-C-Cc--cc-eeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCE
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANN-L-HG--DY-QLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINT 241 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~-~-~~--e~-~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~ 241 (532)
.|.-||.||.|+.| |++ ||++++...... . .+ .- .-...+..+.|.+.++.. ++|++.||++|+|+
T Consensus 14 wG~Ataa~Q~EGa~~edGkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~ 87 (479)
T 2xhy_A 14 WGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAVDFYGHY------KEDIKLFAEMGFKC 87 (479)
T ss_dssp ECCBCCHHHHCCCTTSTTCCCBTTTTBCCCBTTBCCCBCSSCCTTSCCHHHHTTCHHHHH------HHHHHHHHHHTCSE
T ss_pred EeEeChhhhcCCCcCCCCCcCcceeecccCCCCccccCCccccccccCCCcccccchhhh------HHHHHHHHHcCCCE
Confidence 34567889999999 566 999997543210 0 00 00 000112346677777776 99999999999999
Q ss_pred EEEccccccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHH
Q 009560 242 VRIPVGWWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLD 319 (532)
Q Consensus 242 VRIpv~ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~ 319 (532)
+|+++.|..+ .|.. .+..++..++++|++|+.|.++||.+||+||+. +.+..... ...|.++..++.+++
T Consensus 88 ~R~sisW~Ri-~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~-------d~P~~l~~~~ggw~~~~~~~~F~~ 159 (479)
T 2xhy_A 88 FRTSIAWTRI-FPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHF-------EMPLHLVQQYGSWTNRKVVDFFVR 159 (479)
T ss_dssp EEEECCHHHH-SSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHSCGGGSTHHHHHHHH
T ss_pred EEeeCCHHHh-CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCC-------CCCHHHHhhcCCCCCHHHHHHHHH
Confidence 9999998544 4543 346688899999999999999999999999984 22110111 235889999999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 320 VIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 320 ~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+|+.+++||++... .|.++|||..
T Consensus 160 ya~~~~~~~gd~V~--~w~t~NEp~~ 183 (479)
T 2xhy_A 160 FAEVVFERYKHKVK--YWMTFNEINN 183 (479)
T ss_dssp HHHHHHHHTTTTCC--EEEEETTTTG
T ss_pred HHHHHHHHhCCCCC--cEEEecCcch
Confidence 99999999999644 5889999975
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.55 E-value=2.5e-14 Score=154.21 Aligned_cols=312 Identities=12% Similarity=0.101 Sum_probs=185.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccC-CCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVAN-NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIP 245 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~-~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIp 245 (532)
.|.-||.||.|++| +++ ||+++...... .+.+ ...++--++.|.++++++ ++|++.||++|+|+.|++
T Consensus 10 wG~AtaAyQiEGa~~~~gkg~siWd~~~~~~~~~~~--~~~~gd~~~~a~d~Yh~y------~eDi~l~~elG~~~yRfS 81 (489)
T 1uwi_A 10 FGWSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAA--GLVSGDLPENGPGYWGNY------KTFHNNAQKMGLKIARLN 81 (489)
T ss_dssp EEEECCHHHHSCSSTTCCCCCBHHHHHHHCHHHHHH--TSSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEE
T ss_pred EEEEchHHhhcCCCCCCCCCCcceeeeeecCCcccC--CCCCCCccccccchhhhH------HHHHHHHHHcCCCEEEEe
Confidence 34567889999999 455 89888644320 0000 011222234455667776 999999999999999999
Q ss_pred cccccccCCCC--------------------------CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 246 VGWWIAFDPDP--------------------------PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 246 v~ww~~~~~~~--------------------------~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
|.|..+++... .++.++.++++++++|+.|.++||.++|+|||. +.+
T Consensus 82 IsWsRI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~-------DlP 154 (489)
T 1uwi_A 82 SEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHW-------PLP 154 (489)
T ss_dssp CCHHHHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCCS-------CCB
T ss_pred CcHHHCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCcceEEeecC-------Ccc
Confidence 99965543211 023466799999999999999999999999994 333
Q ss_pred CCC-----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------C--CCccc----
Q 009560 300 ASR-----------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------T--VPLDI---- 352 (532)
Q Consensus 300 g~~-----------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~--~~~~~---- 352 (532)
-.. .....|.+++..+.|+++.+.+++||++....+. .+|||... . .....
T Consensus 155 ~~L~d~y~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~W~--T~NEp~~~~~~gy~~~~~~~~pg~~~~~~~ 232 (489)
T 1uwi_A 155 LWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYTAWKFDDLVDEYS--TMNEPNVVGGLGYVGVKSGFPPGYLSFELS 232 (489)
T ss_dssp GGGBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSEEE--EEECHHHHHHHHHTCGGGCCTTCCCCHHHH
T ss_pred HHHHHhhhhcccccccCCCcCCHHHHHHHHHHHHHHHHHhCCccCeEE--EecCchheccccccccccCCCCCcccHHHH
Confidence 211 1235799999999999999999999999877754 99999530 0 01111
Q ss_pred ------HHHHHHHHHHHHHhhCCCcEEEE-eCC----CCCCCch----------h-hhhc------c----------CCC
Q 009560 353 ------LVPYYKQGYQIVRKYSPTAYVIV-CQR----IGNADPL----------E-LYQA------N----------IGL 394 (532)
Q Consensus 353 ------l~~~~~~~~~aIR~~~~~~~Viv-~~~----~~~~~~~----------~-~~~~------~----------~~~ 394 (532)
+.....++++++|+..+..+=++ ... ....+.. . +++. + ...
T Consensus 233 ~~a~h~~llAha~a~~~~r~~~~~~iGi~~~~~~~~P~~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~g 312 (489)
T 1uwi_A 233 RRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKG 312 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEESSTTCHHHHHHHHHHHTHHHHHHHHTCEEEETTEEEECTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHhcccccceeeeeccccccCCCccCHHHHHHHHhhhcccccCccccCccccccceeeecccCC
Confidence 22223456677888776543222 211 1111210 0 1110 0 011
Q ss_pred CcEEEEeeecccCCC-----------cc------c-----cC--C-hhhhH--HHHHHHHHHHHHHHHhcCCCcEEEecc
Q 009560 395 HNIVVDLHYYNLFDT-----------FF------V-----NM--S-TVDNI--LFIYKSREAQLQALNNANGPLVFIGEW 447 (532)
Q Consensus 395 ~nvv~s~H~Y~~f~~-----------~~------~-----~~--~-~~~~i--~~i~~~~~~~~~~~~~~~g~pv~vGEw 447 (532)
.-..+.+-+|....- .. . .. + ..|.+ .-++ ..+..+.++.++||+|+|-
T Consensus 313 ~~DFiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~----~~L~~~~~rY~~Pi~ITEN 388 (489)
T 1uwi_A 313 RLDWIGVNYYTRTVVKRTGKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLY----DVLTKYWNRYHLYMYVTEN 388 (489)
T ss_dssp CCSCEEEEEEEEEEEEEETTEEEECTTSTTSSCTTSBCTTSCBBCTTCCBCCTHHHH----HHHHHHHHHHCCCEEEEEC
T ss_pred ccCcceeccceeeeeecCCCcccCCCCcCcccccccccCCCccccCCCCeechHHHH----HHHHHHHHhhCCCEEEecC
Confidence 234566667753100 00 0 00 0 00111 1122 2233344444689999999
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCccc
Q 009560 448 VNEWNVTSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 448 G~~~~~~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
|.....+....+-++.+++++..+.+. .-.|.+.|++-. .-.|..--..+-|++-
T Consensus 389 G~~~~~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D-nfEW~~Gy~~RfGliy 445 (489)
T 1uwi_A 389 GIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLAD-NYEWASGFSMRFGLLK 445 (489)
T ss_dssp CCCCSSCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGGGGSCCCSEE
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchH-hhChhhhcccccceEE
Confidence 986443222233456777777777764 335999999987 3445544445556553
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6.2e-13 Score=147.28 Aligned_cols=227 Identities=18% Similarity=0.188 Sum_probs=148.7
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC---CCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQ---NGMEHSASRDG 304 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq---n~~~~sg~~~g 304 (532)
++|++.||++|+|+||+.- . |.. ++++++|.++||+|+.+++.....+ .+++. +.. .
T Consensus 314 ~~di~l~k~~g~N~vR~~h-----y------p~~-------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~-~~~-~ 373 (605)
T 3lpf_A 314 VHDHALMDWIGANSYRTSH-----Y------PYA-------EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEA-GNK-P 373 (605)
T ss_dssp HHHHHHHHHHTCCEEEECS-----S------CCC-------HHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCC-CCC-C
T ss_pred HHHHHHHHHCCCcEEEecC-----C------CCc-------HHHHHHHHhcCCEEEEecccccccccccccccc-ccC-c
Confidence 6899999999999999842 1 111 3788999999999999997531111 01111 100 0
Q ss_pred CCCC----CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 305 TTDW----PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 305 ~~~W----~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
...+ .+++.++.+.+.++.+.+|++++|+|++|.+.|||... .+...++++++++.+|+.||+++|.......
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~ 450 (605)
T 3lpf_A 374 KELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTR---PQGAREYFAPLAEATRKLDPTRPITCVNVMF 450 (605)
T ss_dssp SCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCCC---STTHHHHHHHHHHHHHHHCSSSCEEEEEETT
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCcccccc---cchHHHHHHHHHHHHHHHCCCCcEEEecccc
Confidence 0112 14677889999999999999999999999999999742 3456789999999999999999998764221
Q ss_pred CCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC-------
Q 009560 381 NADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV------- 453 (532)
Q Consensus 381 ~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~------- 453 (532)
.....+ . ..+--.|+++|.|..+-.. ....+ .+...+.+.+..+.+..++|++++|||+....
T Consensus 451 ~~~~~d---~-~~~~~Dvig~N~Y~gwY~~--~g~~~----~~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~~ 520 (605)
T 3lpf_A 451 CDAHTD---T-ISDLFDVLCLNRYYGWYVQ--SGDLE----TAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYT 520 (605)
T ss_dssp SCTTTC---S-SGGGSSSEEEECCBTTTBS--TTCHH----HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSSC
T ss_pred Cccccc---c-cccccceeeeccccccccC--CCchH----HHHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCCC
Confidence 110000 0 1122346888888653211 01111 22222223334445555789999999975321
Q ss_pred CCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCC
Q 009560 454 TSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKND 487 (532)
Q Consensus 454 ~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e 487 (532)
..-+.+....|++.+++++++ .-+|++.|.+..-
T Consensus 521 ~~~sEeyq~~~~~~~~~~~~~~~~~~G~~iW~~~Df 556 (605)
T 3lpf_A 521 DMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADF 556 (605)
T ss_dssp CTTSHHHHHHHHHHHHHHHTTCTTEEEEEEEEEECB
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEeeee
Confidence 112444556788999999987 4589999999874
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.54 E-value=3.4e-14 Score=151.95 Aligned_cols=318 Identities=13% Similarity=0.109 Sum_probs=187.1
Q ss_pred ceEEeCCCCCCCC-C--CCCcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccc
Q 009560 171 NQLTSDYPGMPGW-D--DNAATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVG 247 (532)
Q Consensus 171 ~~v~ad~~~~~~W-~--~~ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ 247 (532)
|.-||.||.++++ + +.+|.|+..... +-.-.-.+..+-..+.|.+.++.+ ++|++.|+++|+|++|+.+.
T Consensus 10 G~Atsa~Q~EGa~~g~~~~~s~wd~~~~~-~~~~~~~~~~~~~~~~a~d~Y~~y------~eDi~lm~~~G~~~~R~sis 82 (481)
T 1qvb_A 10 GYSSSPFQFEAGIPGSEDPNSDWWVWVHD-PENTAAGLVSGDFPENGPGYWNLN------QNDHDLAEKLGVNTIRVGVE 82 (481)
T ss_dssp EEECCHHHHSCCSTTCCCTTBHHHHHHHC-HHHHHHTSSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEECC
T ss_pred eeecccceeecCcCCCCCCCeEEEecccC-CccccccccCCCCCccccchHHHH------HHHHHHHHHcCCCccEeccc
Confidence 3456667777333 1 157777754321 100000011222446788888877 99999999999999999998
Q ss_pred cccccCCCCCC-----------------CCC------------cChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 248 WWIAFDPDPPA-----------------PFI------------GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 248 ww~~~~~~~~~-----------------~~~------------~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
|.. +.|.++. .++ +..++.++++|+.++++||.+||+|++..--+.-.+.
T Consensus 83 WsR-i~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~~id~l~~~Gi~p~vtL~H~~lP~~L~~~ 161 (481)
T 1qvb_A 83 WSR-IFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNP 161 (481)
T ss_dssp HHH-HCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCBTTTBCH
T ss_pred hhh-hCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhc
Confidence 854 4555431 567 7789999999999999999999999874211110000
Q ss_pred -----CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CCCc--ccHHHHH----
Q 009560 299 -----SASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TVPL--DILVPYY---- 357 (532)
Q Consensus 299 -----sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~~~--~~l~~~~---- 357 (532)
.|.+.....|.++...+.+.++.+.+++||++. |..|.++|||... +..+ ......+
T Consensus 162 ~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h 239 (481)
T 1qvb_A 162 IMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGEL--PVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARR 239 (481)
T ss_dssp HHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTS--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHH
T ss_pred CCcccccccccCCCcCCchHHHHHHHHHHHHHHHhCCC--ccEEEEecccchhhcccccccccCCCCCCCCHHHHHHHHH
Confidence 011112347989999999999999999999987 5558899999631 1111 1122222
Q ss_pred ------HHHHHHHHhhCCCcEEE-EeCCC---CCCCc------hh-----hhhc------c--------CCCCcEEEEee
Q 009560 358 ------KQGYQIVRKYSPTAYVI-VCQRI---GNADP------LE-----LYQA------N--------IGLHNIVVDLH 402 (532)
Q Consensus 358 ------~~~~~aIR~~~~~~~Vi-v~~~~---~~~~~------~~-----~~~~------~--------~~~~nvv~s~H 402 (532)
.++++++|+..|+.+=+ +...+ .+.++ .. +++. | ....-..+.++
T Consensus 240 ~~llAHa~A~~~~r~~~~~~IGi~~~~~~~~P~~~d~~aa~~~~~~~~~~fld~~~~G~yp~~~~~~~~~~~~~DfiGiN 319 (481)
T 1qvb_A 240 NMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRDLANRLDWLGVN 319 (481)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTTTSSCCSEEEEE
T ss_pred HHHHHHHHHHHHHHHhCcCcEEEEeeCCeeecCCCCHHHHHHHHHHHhhhhhHHHhCCCCCCCCCCCHHHcCCCceEEEe
Confidence 45778889988873222 22111 01121 00 0111 0 02345789999
Q ss_pred ecccCCCcc--------c---------c-C------C-hhhhH--HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC
Q 009560 403 YYNLFDTFF--------V---------N-M------S-TVDNI--LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS 455 (532)
Q Consensus 403 ~Y~~f~~~~--------~---------~-~------~-~~~~i--~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~ 455 (532)
+|....-.. . . . + ..|.+ .-++ ..+..+.++.+.||+|+|-|.....+.
T Consensus 320 yY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~----~~L~~~~~rY~~Pi~ITENG~~~~~D~ 395 (481)
T 1qvb_A 320 YYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGLY----LLLKELYNRYGVDLIVTENGVSDSRDA 395 (481)
T ss_dssp CCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHHH----HHHHHHHHHHCCEEEEEECCCCCTTCS
T ss_pred cccceEEeccCcccccCCccccccccccccCCCCCcCCCCCccchHHHH----HHHHHHHHHhCCCEEEEeCCCCccccH
Confidence 997631100 0 0 0 0 00111 1222 223334444467999999998643222
Q ss_pred CCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCccc
Q 009560 456 GTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 456 a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
...+-++++++++..+.+. .-.|.++|++-.. -.|...-..+-|++-
T Consensus 396 ~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn-~EW~~Gy~~RfGLv~ 444 (481)
T 1qvb_A 396 LRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDN-YEWAQGFRQKFGLVM 444 (481)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBCC-CCGGGTTSSCCCSEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEEecccccc-ccccCCCCCCceEEE
Confidence 2233456677777777764 2369999999873 337655556666664
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.54 E-value=3.1e-14 Score=153.45 Aligned_cols=312 Identities=12% Similarity=0.095 Sum_probs=185.3
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccC-CCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVAN-NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIP 245 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~-~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIp 245 (532)
.|.-||.||.|++| +++ ||.++...... .+.. ...++--++.|.+.++.+ ++|++.||++|+|+.|++
T Consensus 10 wG~AtaAyQiEGa~~~~g~~~s~wd~~~~~~~~~~~--~~~~gd~~~~a~d~yh~y------~eDi~l~~~mG~~~yRfS 81 (489)
T 4ha4_A 10 FGWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAA--GLVSGDFPENGPGYWGNY------RKFHDAAQAMGLTAARIG 81 (489)
T ss_dssp EEEEECHHHHSCSSTTCCCCCBHHHHHHHCHHHHHH--TSSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEE
T ss_pred EEEechHHhhcCCcCCCCCCCcceeecccccCcccC--CCcCCCCccccccHHHHH------HHHHHHHHHcCCCEEEee
Confidence 34567889999999 454 88888543220 0000 011222234566677776 899999999999999999
Q ss_pred cccccccCCCCC---------------------------CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 246 VGWWIAFDPDPP---------------------------APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 246 v~ww~~~~~~~~---------------------------~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
|.|..+++.... ++.++..+++++++|+.|.++||.++|+|||. +.
T Consensus 82 IsWsRI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~-------Dl 154 (489)
T 4ha4_A 82 VEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMFSDLRSRGITFILNLYHW-------PL 154 (489)
T ss_dssp CCHHHHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CC
T ss_pred ccHHhcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCeeeEeecCC-------Cc
Confidence 999655432110 12367799999999999999999999999994 33
Q ss_pred CCCC-----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CC--Cccc---
Q 009560 299 SASR-----------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TV--PLDI--- 352 (532)
Q Consensus 299 sg~~-----------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~--~~~~--- 352 (532)
+-.. .....|.+++..+.++++.+.+++||++....+. .+|||... .. ....
T Consensus 155 P~~L~d~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~W~--T~NEp~~~~~~gy~~~~~~~~p~~~~~~~ 232 (489)
T 4ha4_A 155 PLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVAWKLDDLVYMYS--TMNEPNVVWGLGYAAVKSGFPPGYLCLEC 232 (489)
T ss_dssp BTTTBCHHHHHTTCTTSCBGGGSHHHHHHHHHHHHHHHHHHGGGCSEEE--EEECHHHHHHHHHTCGGGCCTTCCCCHHH
T ss_pred hHHHhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCccceEE--EeccchhhhcccccccccCCCccccCHHH
Confidence 3211 1245799999999999999999999999877654 99999530 00 1111
Q ss_pred -------HHHHHHHHHHHHHhhCCCcEEEEe-CC----CCCCCch---------h--hhhc------c------CCCCcE
Q 009560 353 -------LVPYYKQGYQIVRKYSPTAYVIVC-QR----IGNADPL---------E--LYQA------N------IGLHNI 397 (532)
Q Consensus 353 -------l~~~~~~~~~aIR~~~~~~~Viv~-~~----~~~~~~~---------~--~~~~------~------~~~~nv 397 (532)
+.....++++++|+..+...-++. .. ....+.. . +++. + ....-.
T Consensus 233 ~~~~~h~~l~Aha~a~~~~~~~~~~~iGi~~~~~~~~P~~~~d~~aa~~~~~~~~~~f~d~~~~g~~p~~~~~~lk~~~D 312 (489)
T 4ha4_A 233 AGRAMKNLVQAHARAYDAVKAITKKPVGVIYANSDFTPLTDADREAAERAKFDNRWAFFDAVVRGQLGGSTRDDLKGRLD 312 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSGGGHHHHHHHHHHHTHHHHHHHHHCEETTEECTTTTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCceeEEeeccccccccchhHHHHHHHHHhhcccccChhhcCcCCcccchhcccccc
Confidence 222334567788888776543332 11 1111110 0 1110 0 112234
Q ss_pred EEEeeecccCC---------------Ccc--ccC--------ChhhhH--HHHHHHHHHHHHHHHhcCCCcEEEeccCcc
Q 009560 398 VVDLHYYNLFD---------------TFF--VNM--------STVDNI--LFIYKSREAQLQALNNANGPLVFIGEWVNE 450 (532)
Q Consensus 398 v~s~H~Y~~f~---------------~~~--~~~--------~~~~~i--~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~ 450 (532)
.+.+-+|...- ... ... ...|.+ .-++ ..+..+.++.+.||+|+|-|..
T Consensus 313 fiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~----~~L~~~~~rY~~Pi~ITENG~~ 388 (489)
T 4ha4_A 313 WIGVNYYTRQVVRARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEGLY----NVLKEYWDRYHLPLLVTENGIA 388 (489)
T ss_dssp CEEEEEEEEEEEEEETTEEEECTTSTTSSCTTCBCTTSCBBCTTSCBCCTHHHH----HHHHHHHHHHCCCEEEEECCCC
T ss_pred ccccccccceeeecCCCccccCccccccccccccccCCCccCCCCceeccHHHH----HHHHHHHhhcCCCEEEecCCCC
Confidence 56666664310 000 000 000111 1122 1233334444689999999986
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCccc
Q 009560 451 WNVTSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 451 ~~~~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
...+....+-++.+++++..+.+. .-.|.+.|++-. .-.|..--..+-|++-
T Consensus 389 ~~~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D-nfEW~~Gy~~RfGliy 442 (489)
T 4ha4_A 389 DEGDYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLAD-NYEWASGFSKRFGLLM 442 (489)
T ss_dssp CTTCSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBC-CCCGGGGGGSCCCSEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHCCCCEEEEeecCchh-hhchhhccccccceEE
Confidence 443222233346777777777763 346999999887 3345443344555554
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1e-13 Score=150.21 Aligned_cols=273 Identities=13% Similarity=0.100 Sum_probs=151.2
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHH-HcCCCEEEEcccccccc---CCCC---CCCCCcChHHHHHHH
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLY-RHGINTVRIPVGWWIAF---DPDP---PAPFIGGSLEALDNA 271 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la-~~G~N~VRIpv~ww~~~---~~~~---~~~~~~~~l~~Ld~~ 271 (532)
+..-|+-|=+.| .+...++.++ +++++.|+ ++|++.||+++.|.... ...+ ++. ..-.+..+|++
T Consensus 14 ~~~~w~~~~g~g--~~~~~~r~~~-----~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~-~~~n~~~~D~~ 85 (503)
T 1w91_A 14 FKKNWKFCVGTG--RLGLALQKEY-----LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMK-PFYNFTYIDRI 85 (503)
T ss_dssp CCSGGGSEEECS--CGGGGGBHHH-----HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEE-EEECCHHHHHH
T ss_pred Cccchhhccccc--cchhhhCHHH-----HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCc-eeeccHHHHHH
Confidence 334444333333 3334455554 79999997 89999999998775211 1111 110 01137899999
Q ss_pred HHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC----CCChhhHHHHHHHHHH----HHHHhCCCCcEE--EEEecc
Q 009560 272 LSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD----WPASDYISQTLDVIDF----LASRYAKHPALL--GIELLN 341 (532)
Q Consensus 272 v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~----W~~~~~~~~~~~~w~~----la~ry~~~p~v~--g~EL~N 341 (532)
+++|+++||+++|.+++.|..- .++.. .... |..++..+.+.++++. +.+||++. .|- -||++|
T Consensus 86 ~~~~~~~Gi~p~v~l~~~P~~~----~~~~~-~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~-~V~~W~wev~N 159 (503)
T 1w91_A 86 VDSYLALNIRPFIEFGFMPKAL----ASGDQ-TVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIE-EVRTWLFEVWN 159 (503)
T ss_dssp HHHHHHTTCEEEEEECSBCGGG----BSSCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHHTSEEEECS
T ss_pred HHHHHHCCCEEEEEEcCCcHHH----hCCCC-ceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCch-hhceeeEEEee
Confidence 9999999999999999876521 11110 0111 2335566666655554 44666643 133 589999
Q ss_pred CCCCCC----CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC--CCc-hhhhhcc--CCCCcEEEEeeecccCCCccc
Q 009560 342 EPSAAT----VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN--ADP-LELYQAN--IGLHNIVVDLHYYNLFDTFFV 412 (532)
Q Consensus 342 EP~~~~----~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~--~~~-~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~ 412 (532)
||.... .+.+.+.+++++++++||+++|+..|. +++... ..+ ..++... .+..-.++++|+|.......+
T Consensus 160 Ep~~~~~~~~~~~~~y~~~~~~~~~~ik~~~P~~~vg-gp~~~~~~~~w~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~ 238 (503)
T 1w91_A 160 EPNLVNFWKDANKQEYFKLYEVTARAVKSVDPHLQVG-GPAICGGSDEWITDFLHFCAERRVPVDFVSRHAYTSKAPHKK 238 (503)
T ss_dssp CTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTTCEEE-EEEECSSCTHHHHHHHHHHHHTTCCCCEEEEEEECBCSCSEE
T ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEE-eeeccCCchHHHHHHHHHHHhCCCCCCEEEEeecCCCccccc
Confidence 998631 145668889999999999999998763 322111 111 2333321 234567899999986322000
Q ss_pred c----CChhhhHHHHHHHHHHHHHHHHhc--CCCcEEEeccCcccCCCCC--CHHHHHHHHHHHHHHHHhCCCcEEEEcc
Q 009560 413 N----MSTVDNILFIYKSREAQLQALNNA--NGPLVFIGEWVNEWNVTSG--TQKDYQDFGSAQLEVYNAASFGWAYWTL 484 (532)
Q Consensus 413 ~----~~~~~~i~~i~~~~~~~~~~~~~~--~g~pv~vGEwG~~~~~~~a--~~~~~~~~~~~ql~~~~~~~~Gw~yW~~ 484 (532)
. .........+..........+.+. .+.||+|+|||..+..... +......|+..++......--+..||++
T Consensus 239 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~~~~~~v~~~~~w~~ 318 (503)
T 1w91_A 239 TFEYYYQELEPPEDMLEQFKTVRALIRQSPFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTF 318 (503)
T ss_dssp CSSCEECCBCCHHHHHHHHHHHHHHHHTSSSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCS
T ss_pred cccccccccCCHHHHHHHHHHHHHHHHhcCCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHHHHhhhhheEEEEEE
Confidence 0 000001122222221111112222 3689999999987532111 1111244554443322223346789988
Q ss_pred cC
Q 009560 485 KN 486 (532)
Q Consensus 485 k~ 486 (532)
.+
T Consensus 319 ~D 320 (503)
T 1w91_A 319 SD 320 (503)
T ss_dssp BS
T ss_pred ec
Confidence 75
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.3e-13 Score=149.22 Aligned_cols=253 Identities=12% Similarity=0.072 Sum_probs=141.3
Q ss_pred HHHHHHHH-HcCCCEEEEcccccccc---CCCC---CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLY-RHGINTVRIPVGWWIAF---DPDP---PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300 (532)
Q Consensus 228 e~d~~~la-~~G~N~VRIpv~ww~~~---~~~~---~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg 300 (532)
++|++.|+ ++|+++||+++.|.... ...+ .+. ..-.+..+|+++++|+++||+++|.+++.|..-. .+
T Consensus 36 ~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~-~~~~~~~~D~~~~~~~~~Gi~p~v~l~~~P~~~~----~~ 110 (500)
T 1uhv_A 36 IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVK-PFYNFTYIDRIFDSFLEIGIRPFVEIGFMPKKLA----SG 110 (500)
T ss_dssp HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEE-EEECCHHHHHHHHHHHHHTCEECEEECCCCTTTB----SS
T ss_pred HHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCc-eEEehhHHHHHHHHHHHCCCEEEEEEccChHHHh----CC
Confidence 79999998 99999999999875311 1111 110 0113789999999999999999999999875321 11
Q ss_pred CCC---CCCCCCChhhHHHHHHHHHH----HHHHhCCC-CcEEEEEeccCCCCCC----CCcccHHHHHHHHHHHHHhhC
Q 009560 301 SRD---GTTDWPASDYISQTLDVIDF----LASRYAKH-PALLGIELLNEPSAAT----VPLDILVPYYKQGYQIVRKYS 368 (532)
Q Consensus 301 ~~~---g~~~W~~~~~~~~~~~~w~~----la~ry~~~-p~v~g~EL~NEP~~~~----~~~~~l~~~~~~~~~aIR~~~ 368 (532)
... -...|..|+..+.+.++++. +.+||++. ...+-||++|||.... .+.+.+.+++.+++++||+++
T Consensus 111 ~~~~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ryg~~~V~~W~~~~~NEpn~~~~~~~~~~~~y~~~~~~~~~~ik~~~ 190 (500)
T 1uhv_A 111 TQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVN 190 (500)
T ss_dssp CCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHC
T ss_pred CCceeecCCCCCCCcCHHHHHHHHHHHHHHHHHhcCccceeeeeEEEeeCCCCcccCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 000 00113344555555555555 44566543 2222479999998631 245567888999999999999
Q ss_pred CCcEEEEeCCCC-CCCc-hhhhhcc--CCCCcEEEEeeecccCCCcccc----CChhhhHHHHHHHHHHHHHHHHhc--C
Q 009560 369 PTAYVIVCQRIG-NADP-LELYQAN--IGLHNIVVDLHYYNLFDTFFVN----MSTVDNILFIYKSREAQLQALNNA--N 438 (532)
Q Consensus 369 ~~~~Viv~~~~~-~~~~-~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~----~~~~~~i~~i~~~~~~~~~~~~~~--~ 438 (532)
|+..|......+ ...+ ..++... .+..-.++++|+|..... .+. .........+..........+.+. .
T Consensus 191 P~~~vggp~~~~~~~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~ 269 (500)
T 1uhv_A 191 ENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQG-EYTPHLIYQEIMPSEYMLNEFKTVREIIKNSHFP 269 (500)
T ss_dssp TTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCC-CCCSSCCCCCBCCHHHHHHHHHHHHHHHHTSSCT
T ss_pred CCCEEECcccCCCchHHHHHHHHHHHhCCCCCcEEEEeecCCCcc-cccccccccccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 997763221111 0111 2333321 234567999999986431 110 000001112222121111222332 3
Q ss_pred CCcEEEeccCcccCCCC--CCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 439 GPLVFIGEWVNEWNVTS--GTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 439 g~pv~vGEwG~~~~~~~--a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+.||+|+|||..+.... .+......|+...+......--+..||++..
T Consensus 270 ~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~~~~~~v~~~~~W~l~D 319 (500)
T 1uhv_A 270 NLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 319 (500)
T ss_dssp TCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred CCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHHHHHhhhhheeeeEEec
Confidence 68999999998753211 1112224455443322222344788998865
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-14 Score=155.61 Aligned_cols=156 Identities=15% Similarity=0.149 Sum_probs=122.4
Q ss_pred CceEEeCCCCCCCCCCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcccc
Q 009560 170 GNQLTSDYPGMPGWDDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248 (532)
Q Consensus 170 ~~~v~ad~~~~~~W~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~w 248 (532)
.|.-||.||.|++|+++ ||+++......+. .+.++...+.|.+.++.+ ++|++.||++|+|++|+++.|
T Consensus 9 wG~AtaA~QiEGa~dGkg~siwD~~~~~~~~----~~~~~~~~~~A~D~Yhry------~eDi~lm~~lG~~~~Rfsi~W 78 (479)
T 4b3l_A 9 WGGATSGPQSEGRFAKQHRNLFDYWYEEEPD----LFYDYVGPDTASDAYHQI------ESDLTLLASLGHNSYRTSIQW 78 (479)
T ss_dssp EEEECCHHHHSCSTTCCSCBHHHHHHHHCGG----GSGGGCCTTTTTCHHHHH------HHHHHHHHTTTCCEEEEECCH
T ss_pred EEEEChHHhhccCCCCCCccHHHHHhhcCCc----cccCCCCCccccchHHHH------HHHHHHHHHcCCCEEEeecCH
Confidence 34567889999999665 9999965543111 123455667899999888 999999999999999999998
Q ss_pred ccccCCC-CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHHHHH
Q 009560 249 WIAFDPD-PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 249 w~~~~~~-~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.. +.|+ ..+.+++.+++.+|++|+.+.++||.++|+|||. +.+..... ...|.+++..+.++++.+.+++
T Consensus 79 ~R-i~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~-------dlP~~L~~~yGGW~nr~~vd~F~~YA~~~f~ 150 (479)
T 4b3l_A 79 TR-LIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHF-------DLPIALYQAYGGWESKHVVDLFVAFSKVCFE 150 (479)
T ss_dssp HH-HBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSS-------CCBHHHHHHHCGGGCHHHHHHHHHHHHHHHH
T ss_pred HH-hccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCC-------CcCHHHHHhcCCcCCHHHHHHHHHHHHHHHH
Confidence 54 4555 3456788899999999999999999999999984 33211111 2569999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC
Q 009560 327 RYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~ 345 (532)
||++.... |-.+|||..
T Consensus 151 ~fgdrVk~--WiT~NEp~~ 167 (479)
T 4b3l_A 151 QFGDRVKD--WFVHNEPMV 167 (479)
T ss_dssp HHTTTCCE--EEEEECHHH
T ss_pred HhCccCCe--EEEccCcch
Confidence 99997665 559999973
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-14 Score=152.94 Aligned_cols=159 Identities=15% Similarity=0.204 Sum_probs=120.9
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecc------cChhhHHHHHHhhccccCCHHHHHHHHHcCCC
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANG------YGHERAKEVLKRHRNTFITIEDFNFLYRHGIN 240 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~------~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N 240 (532)
.|.-||.||.|++| |++ ||++|..... .....-.+.++ +..+.|.+.++++ ++|++.||++|+|
T Consensus 17 wG~AtaA~QiEGa~~~dGkg~siwD~~~~~-~~~~p~~i~~~~~~~~~~~~~~A~D~Yhry------~eDi~Lm~elG~~ 89 (481)
T 3qom_A 17 WGGAVAAHQLEGGYKEGGKGLSTADIMTLG-TNERPREITDGVVAGKYYPNHQAIDFYHRY------PEDIELFAEMGFK 89 (481)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBGGGGBCCC-CSSSCCCBCSSCCTTCCCTTTTTTCHHHHH------HHHHHHHHHHTCS
T ss_pred EEEechHHHhcCCcCCCCCCCChhhccccc-ccCCcccccCCccccccCCCCccccHHHHH------HHHHHHHHHcCCC
Confidence 44567889999999 566 9999965432 10001111121 2347888999888 9999999999999
Q ss_pred EEEEccccccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC-CCCCCCCChhhHHHHH
Q 009560 241 TVRIPVGWWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR-DGTTDWPASDYISQTL 318 (532)
Q Consensus 241 ~VRIpv~ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~-~g~~~W~~~~~~~~~~ 318 (532)
++|++|.|..+ .|.+ .++.++..++.++++|+.|.++||.++|+|+| |+.+-.. +....|.+++..+.++
T Consensus 90 ~yRfSIsWsRI-~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-------~DlP~~L~~~yGGW~nr~~v~~F~ 161 (481)
T 3qom_A 90 CFRTSIAWTRI-FPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAH-------FEMPYHLVKQYGGWRNRKLIQFYL 161 (481)
T ss_dssp EEEEECCHHHH-SSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-------SCCBHHHHHHHCGGGSTHHHHHHH
T ss_pred EEEecCcHHHc-CcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEcc-------CCCCHHHHhhcCCCCCHHHHHHHH
Confidence 99999998654 4443 24668889999999999999999999999998 3333211 1125699999999999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 319 DVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 319 ~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
++.+.+++||++.... |-++|||..
T Consensus 162 ~YA~~~f~~fgdrVk~--W~T~NEp~~ 186 (481)
T 3qom_A 162 NFAKVCFERYRDKVTY--WMTFNEINN 186 (481)
T ss_dssp HHHHHHHHHTTTTCCE--EEEETTGGG
T ss_pred HHHHHHHHHhCCcCCE--EEEccCccH
Confidence 9999999999987665 559999974
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.5e-14 Score=154.91 Aligned_cols=155 Identities=14% Similarity=0.165 Sum_probs=120.3
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+++......+ .+.++...+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 26 wG~AtaA~QiEGa~~edGkg~SiwD~~~~~~~-----~i~~~~~gd~A~D~Yhry------keDi~lm~elG~~~yRfsI 94 (481)
T 3f5l_A 26 FGTVTSAYQVEGMAASGGRGPSIWDAFAHTPG-----NVAGNQNGDVATDQYHRY------KEDVNLMKSLNFDAYRFSI 94 (481)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHTSTT-----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEEchhhhhccCcCCCCCcCchhhhhhcCCC-----cccCCCCCCcccchhhhH------HHHHHHHHHcCCCEEEecC
Confidence 45567889999999 555 999997554311 112333446788888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|.. +.|++.+.+++..++.++++|+.|.++||.+||+|||. +.+.... ....|.+++..+.++++.+.++
T Consensus 95 sWsR-I~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~nr~~v~~F~~Ya~~~~ 166 (481)
T 3f5l_A 95 SWSR-IFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHY-------DLPLALEKKYGGWLNAKMADLFTEYADFCF 166 (481)
T ss_dssp CHHH-HCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CCBHHHHHHHCGGGSTTHHHHHHHHHHHHH
T ss_pred cHHH-hCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 9854 45554345788899999999999999999999999983 3321111 1246999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
+||++.... |-++|||..
T Consensus 167 ~~fgd~Vk~--W~T~NEp~~ 184 (481)
T 3f5l_A 167 KTFGNRVKH--WFTFNQPRI 184 (481)
T ss_dssp HHHTTTCCE--EEEEECHHH
T ss_pred HHhCCCCCe--EEEccCchH
Confidence 999987655 569999963
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.3e-14 Score=153.75 Aligned_cols=154 Identities=14% Similarity=0.217 Sum_probs=120.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| |++ ||+++......+- .+.+....+.|.+.++.+ ++|++.||++|+|+.|++|
T Consensus 18 wG~AtaA~QiEGa~~~dGkg~SiwD~~~~~~~~----~i~~~~~gd~A~D~Yhry------~EDi~Lm~elG~~~yRfSI 87 (487)
T 3vii_A 18 LGAATASYQIEGAWDENGKGPNIWDTLTHEHPD----YVVDGATGDIADDSYHLY------KEDVKILKELGAQVYRFSI 87 (487)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHHHCGG----GSGGGCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEeccHHhcCCCcCCCCCcccHHHhHhhcCCc----cccCCCCCCcccChHHHH------HHHHHHHHHcCCCEEEeeC
Confidence 45567889999999 555 9999975443110 111233346788888888 9999999999999999999
Q ss_pred ccccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|-.++ |+. .++.++.++++++++|+.|.++||.++|+|+| |+.+-.......|.+++..+.|+++.+.++
T Consensus 88 sWsRI~-P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H-------~DlP~~L~~~GGW~nr~~v~~F~~YA~~~f 159 (487)
T 3vii_A 88 SWARVL-PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH-------WDLPQALQDLGGWPNLVLAKYSENYARVLF 159 (487)
T ss_dssp CHHHHS-TTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-------SCCBHHHHTTTSTTSTHHHHHHHHHHHHHH
T ss_pred CHHHcC-cCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEec-------CCCcHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence 986554 443 45668899999999999999999999999998 343322223467999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCC
Q 009560 326 SRYAKHPALLGIELLNEP 343 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP 343 (532)
+||++.... |-.+|||
T Consensus 160 ~~fgdrVk~--W~T~NEp 175 (487)
T 3vii_A 160 KNFGDRVKL--WLTFNEP 175 (487)
T ss_dssp HHHTTTCCE--EEEEECH
T ss_pred HHhcCCCCe--EEEecCc
Confidence 999997766 4499999
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.6e-14 Score=153.50 Aligned_cols=155 Identities=12% Similarity=0.159 Sum_probs=120.6
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+++......+ .+.++...+.|.+.++++ ++|++.||++|+|++|+++
T Consensus 23 wG~AtaA~QiEGa~~edGkg~SiwD~~~~~~~-----~i~~~~~gd~A~D~YhrY------~eDi~lm~elG~~~yRfsI 91 (488)
T 3gnp_A 23 FGTASAAYQYEGAVKEDGRGQTIWDTFAHTFG-----KITDFSNADVAVDQYHRF------EEDIQLMADMGMDAYRFSI 91 (488)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTSTT-----SSTTSCCCSSTTCHHHHH------HHHHHHHHHHTCCEEEEEC
T ss_pred EEEEchHHHhCCCcCCCCCcCchhhhhhcCCC-----cccCCCCCCcccchhhhH------HHHHHHHHHcCCCEEEecc
Confidence 45567889999999 555 999997554211 112233346788888888 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|.. +.|.+.+.+++.+++.++++|+.|.++||.++|+|||. +.+.... ....|.+++..+.++++.+.++
T Consensus 92 ~WsR-I~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~n~~~v~~F~~Ya~~~~ 163 (488)
T 3gnp_A 92 AWSR-IYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHW-------DLPQALEDKYKGWLDRQIVDDFAAYAETCF 163 (488)
T ss_dssp CHHH-HCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHHHH
T ss_pred cHHH-eeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCCC-------CCCHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 9854 45555356788999999999999999999999999983 3321111 1356999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
+||++.... |-++|||..
T Consensus 164 ~~fgd~Vk~--W~T~NEp~~ 181 (488)
T 3gnp_A 164 REFGDRVKH--WITLNEPHT 181 (488)
T ss_dssp HHHTTTCCE--EEEEECHHH
T ss_pred HHhCCCCCE--EEEccCcch
Confidence 999997655 569999963
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.4e-14 Score=153.13 Aligned_cols=156 Identities=13% Similarity=0.200 Sum_probs=117.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ + .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 9 wG~Ataa~QiEGa~~~dGkg~SiwD~~~~~~~---~-~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~~R~si 78 (469)
T 2e9l_A 9 WAAATAAYQVEGGWDADGKGPCVWDTFTHQGG---E-RVFKNQTGDVACGSYTLW------EEDLKCIKQLGLTHYRFSL 78 (469)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHHHCS---S-SSGGGCCSSSTTCTTTCH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeEecchhhhcCCcCCCCCcccceeecccCCC---c-cccCCCCCcccccHHHHH------HHHHHHHHHhCCCeEEccc
Confidence 34567889999999 555 999997543211 0 112222335566665555 9999999999999999999
Q ss_pred ccccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|. .+.|.+ .+.++...++.++++|+.+.++||.++|+|++. +.+........|.++...+.+.++.+.++
T Consensus 79 sWs-Ri~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~l~~~ggw~~r~~~~~f~~ya~~~~ 150 (469)
T 2e9l_A 79 SWS-RLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHF-------DLPQTLEDQGGWLSEAIIESFDKYAQFCF 150 (469)
T ss_dssp CHH-HHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHH
T ss_pred cHh-hcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCcchhhcCCCCCchHHHHHHHHHHHHH
Confidence 885 445655 357788899999999999999999999999763 22211111136889999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
+||++. |..|.++|||..
T Consensus 151 ~~~gd~--V~~W~t~NEp~~ 168 (469)
T 2e9l_A 151 STFGDR--VKQWITINEANV 168 (469)
T ss_dssp HHHTTT--CCEEEEESCHHH
T ss_pred HHhcCc--CCEEEEccCcch
Confidence 999987 556889999963
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.3e-12 Score=129.65 Aligned_cols=244 Identities=14% Similarity=0.095 Sum_probs=145.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCC-CCCcC---hHHHHHHHHHHHHHcCCEEEEEcCCC--CCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPA-PFIGG---SLEALDNALSWAEAYNIKCIIDLHAA--PGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~-~~~~~---~l~~Ld~~v~~a~k~Gi~VILDlH~~--pGsqn~~~~sg~ 301 (532)
++.++.|++.|+|+|||.+.|+.. ++..+. .+..+ ..+.+.++++.|+++||+|+|+.|-. +|...+.-....
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~-~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~ 134 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLME-HPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK 134 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEES-STTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSB
T ss_pred HHHHHHHHHcCCCEEEEEeeecCC-CCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccC
Confidence 589999999999999999966432 222211 12222 68999999999999999999999964 332110000000
Q ss_pred C--CCCCCCCCh-hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 302 R--DGTTDWPAS-DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 302 ~--~g~~~W~~~-~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
. .....|..- ....+++.....++++. .+..|.+-|||.... .-.+++.++++.||+.+|. +|.....
T Consensus 135 ~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~----~V~~~~IGNE~~~~~----~~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 135 EHGPDLESWEAWFGSYSDMMAHYAHVAKRT----GCEMFCVGCEMTTAE----PHEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp SCCTTSSBHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEESCTTTT----TCHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHccCC----CceEEEECCCCCCCC----chHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 0 001111100 11122233333444544 356789999998642 2355678889999999987 6655432
Q ss_pred CCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC----
Q 009560 379 IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT---- 454 (532)
Q Consensus 379 ~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~---- 454 (532)
+...+...+ -+.-.|++++.|.|+..+ + . ..+.+..+.+..++||+++|+|+.....
T Consensus 206 ~~~~~~~~l-----w~~~DvIgin~Y~~~~~w------~----~----~~~~l~~~~~~~~KPIiitE~G~~s~~g~~~~ 266 (343)
T 3civ_A 206 HGREEHVRF-----WDAVDLISSSAYYPIDRW------R----D----RVPVLREVAEAHEKPLFFMEVGCPSRSGSGAC 266 (343)
T ss_dssp TTCTTTCSC-----GGGSSEEEEECCCCGGGH------H----H----HHHHHHHHHHHHTCCEEEEEECCCSBTTGGGS
T ss_pred Ccccccccc-----cccCCEEEEeccCCchhH------H----H----HHHHHHHHHHHhCCCEEEEeeCCCCCCCCCCC
Confidence 211110111 135678999999885221 1 1 1233445555558899999999864211
Q ss_pred --------CCCHHHHHHHHHHHHHHHHhC--CCcEEEEcccCCCCCCchHhhHhCCcc
Q 009560 455 --------SGTQKDYQDFGSAQLEVYNAA--SFGWAYWTLKNDRKHWDFEWNIRNNYL 502 (532)
Q Consensus 455 --------~a~~~~~~~~~~~ql~~~~~~--~~Gw~yW~~k~e~~~Ws~~~~~~~g~~ 502 (532)
..+.+...+|++++++++.+. ..|-++|.|... .|.-..+...|.+
T Consensus 267 p~~~~~~~~~se~~Qa~~l~~~~~~~~~~~~~~G~~vW~w~~~--~~~r~~~~~~~~f 322 (343)
T 3civ_A 267 PWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPWK--LYPREAASEDGSY 322 (343)
T ss_dssp TTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECSS--CCCGGGGGGCCSS
T ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhcCCCccEEEEEEECCC--CccccCcccCCCc
Confidence 124455678999999998764 347889999762 2333334444443
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.4e-14 Score=149.54 Aligned_cols=155 Identities=12% Similarity=0.168 Sum_probs=118.5
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ + .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 11 wG~Ataa~QiEGa~~~dGkg~SiwD~~~~~~~--~--~~~~~~~~~~a~D~Y~~~------~eDi~lm~~~G~~~~R~si 80 (464)
T 1wcg_A 11 FGTSTASYQIEGGWNEDGKGENIWDRLVHTSP--E--VIKDGTNGDIACDSYHKY------KEDVAIIKDLNLKFYRFSI 80 (464)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG--G--GSTTSCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeEeChhHhhcCCcCCCCCcCchheeecccCC--C--cccCCCCCccccchHHhh------HHHHHHHHHhCCCeEEecc
Confidence 34567889999999 555 999997543201 0 111222346788888777 9999999999999999999
Q ss_pred ccccccCCCCC-CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPP-APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~-~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|. .+.|.+. +.++...++.++++|+.|.++||.+||+|++. +.+........|.++...+.++++.+.++
T Consensus 81 sWs-Ri~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H~-------d~P~~L~~~ggw~~r~~~~~f~~ya~~~~ 152 (464)
T 1wcg_A 81 SWA-RIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHW-------DLPQYLQDLGGWVNPIMSDYFKEYARVLF 152 (464)
T ss_dssp CHH-HHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTTHHHHHHHHHHHHH
T ss_pred cHH-HhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-------CCCcchhhcCCCCChhHHHHHHHHHHHHH
Confidence 885 4456553 57788899999999999999999999999874 22211111246889999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCC
Q 009560 326 SRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~ 344 (532)
+||++. |..|.++|||.
T Consensus 153 ~~~gd~--V~~W~t~NEp~ 169 (464)
T 1wcg_A 153 TYFGDR--VKWWITFNEPI 169 (464)
T ss_dssp HHHTTT--CCEEEEEECHH
T ss_pred HHhCCc--CcEEEEccccc
Confidence 999987 55688999996
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.2e-14 Score=151.91 Aligned_cols=155 Identities=16% Similarity=0.203 Sum_probs=117.8
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++..... +- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 15 wG~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~----~~~~~~~~~~a~D~Y~~y------~eDi~lm~~~G~~~~R~si 83 (465)
T 2e3z_A 15 WGYATAAYQIEGSPDKDGREPSIWDTFCKA-PG----KIADGSSGDVATDSYNRW------REDVQLLKSYGVKAYRFSL 83 (465)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHTTS-TT----SSTTSCCSSSTTCTTTTH------HHHHHHHHHTTCSEEEEEC
T ss_pred EeEeccHHHhCCCcCCCCCcCeeeeeeccC-CC----cccCCCCCccccchHHHh------HHHHHHHHHhCCCceeccc
Confidence 34567889999999 555 9999975432 11 011222335666666655 8999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCC-hhhHHHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPA-SDYISQTLDVID 322 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~-~~~~~~~~~~w~ 322 (532)
.|. .+.|.+. +.+++..++.+|++|+.+.++||.++|+|++. +.+..... ...|.+ ++..+.+.++.+
T Consensus 84 sWs-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~~~~~~~~f~~ya~ 155 (465)
T 2e3z_A 84 SWS-RIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHW-------DLPQALDDRYGGWLNKEEAIQDFTNYAK 155 (465)
T ss_dssp CHH-HHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-------CCBHHHHHHHCGGGSHHHHHHHHHHHHH
T ss_pred chH-HhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cCCHHHHhhcCCCCCCcchHHHHHHHHH
Confidence 875 4556653 57788999999999999999999999999763 22211111 246889 999999999999
Q ss_pred HHHHHhCCCCcEEEEEeccCCCC
Q 009560 323 FLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 323 ~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.+++||++. |..|.++|||..
T Consensus 156 ~~~~~~gd~--V~~W~t~NEp~~ 176 (465)
T 2e3z_A 156 LCFESFGDL--VQNWITFNEPWV 176 (465)
T ss_dssp HHHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHHhCCC--ceEEEEccCchH
Confidence 999999987 556889999974
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.3e-14 Score=154.00 Aligned_cols=155 Identities=14% Similarity=0.153 Sum_probs=122.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
+|.-||.||.|++| |++ ||++++.....+- .+.++...+.|.+.++++ ++|++.||++|+|+.|++|
T Consensus 28 wG~AtaA~QiEGa~~~dGkg~SiwD~~~~~~p~----~~~~~~~gdvA~D~Yhry------~EDi~Lm~elG~~~yRfSI 97 (540)
T 4a3y_A 28 MGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPD----MIRGGTNGDVAVDSYHLY------KEDVNILKNLGLDAYRFSI 97 (540)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG----GSGGGCCTTTTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeeechHhhhcCCcCCCCCcccHHHhhhccCCC----cccCCCCCCcccchhHhh------HHHHHHHHHcCCCEEEeec
Confidence 45567889999999 555 9999975532110 122444557788999888 9999999999999999999
Q ss_pred ccccccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~ 323 (532)
.|-.++ |+. .++.++.++++++++|+.|.++||.++|+||| |+.+-... ...+|.+++..+.|+++.+.
T Consensus 98 sWsRI~-P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H-------~dlP~~L~~~yGGW~nr~~v~~F~~Ya~~ 169 (540)
T 4a3y_A 98 SWSRVL-PGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFH-------WDVPQALEDEYGGFLSPRIVDDFCEYAEL 169 (540)
T ss_dssp CHHHHS-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-------SCCBHHHHHHHCGGGSTHHHHHHHHHHHH
T ss_pred cHhhcc-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccC-------CCCcHHHHhccCCcCChHHHHHHHHHHHH
Confidence 996554 432 24668899999999999999999999999999 44432211 13579999999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCC
Q 009560 324 LASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~ 344 (532)
+++||++....+. .+|||.
T Consensus 170 ~f~~fgdrVk~W~--T~NEP~ 188 (540)
T 4a3y_A 170 CFWEFGDRVKHWM--TLNEPW 188 (540)
T ss_dssp HHHHHTTTCCEEE--EEECHH
T ss_pred HHHHhccccCEee--EccccH
Confidence 9999999877754 999995
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.2e-12 Score=141.33 Aligned_cols=270 Identities=14% Similarity=0.174 Sum_probs=151.0
Q ss_pred CCCccceeecccChhhHHHHHHhhccccCCHHHHHHH-HHcCCCEEEEcccccccc---CCCCCC-CCCcChHHHHHHHH
Q 009560 198 NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFL-YRHGINTVRIPVGWWIAF---DPDPPA-PFIGGSLEALDNAL 272 (532)
Q Consensus 198 ~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~l-a~~G~N~VRIpv~ww~~~---~~~~~~-~~~~~~l~~Ld~~v 272 (532)
++..-|..|-+.| .+...++..| ++.++.+ +++||..||++=-+.... ...++. .| .|..+|+++
T Consensus 21 ~~~~~~~~~~g~~--~~~~~l~~d~-----~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y---~~~~~D~~~ 90 (500)
T 4ekj_A 21 PVDRFFDLSIGSD--YPGTLIREDS-----QAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVY---DWTKIDQLY 90 (500)
T ss_dssp ECCCGGGSEEECC--CHHHHTSHHH-----HHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEE---CCHHHHHHH
T ss_pred CCCcccccceecC--CchhhcChHH-----HHHHHHHHHhcCceEEEECCccccccceeecCCCCeec---chHHHHHHH
Confidence 4555555555554 3455555554 4555555 578999999853221100 001111 12 488999999
Q ss_pred HHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC---CChhhH----HHHHHHHHHHHHHhCCC-CcEEEEEeccCCC
Q 009560 273 SWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDW---PASDYI----SQTLDVIDFLASRYAKH-PALLGIELLNEPS 344 (532)
Q Consensus 273 ~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W---~~~~~~----~~~~~~w~~la~ry~~~-p~v~g~EL~NEP~ 344 (532)
+.|.++||++++.|...|.... ++.. ....| .++... +...++.+.+++||+.. ..++.||+.|||+
T Consensus 91 d~~~~~G~~p~~~l~~~P~~~~----~~~~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~ 165 (500)
T 4ekj_A 91 DALLAKGIKPFIELGFTPEAMK----TSDQ-TIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPN 165 (500)
T ss_dssp HHHHHTTCEEEEEECCBCGGGC----SSCC-EETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTT
T ss_pred HHHHHCCCEEEEEEeCCchhhc----CCCC-ccccccCCCCcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCC
Confidence 9999999999999988774211 1100 00111 122223 33445667777888643 3566799999998
Q ss_pred CCC----CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhcc--CCCCcEEEEeeecccCCCccc------
Q 009560 345 AAT----VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN--IGLHNIVVDLHYYNLFDTFFV------ 412 (532)
Q Consensus 345 ~~~----~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~------ 412 (532)
... .+.+.+.++++.++++||+++|+..|+.++..+......++... .+..-.++++|.|........
T Consensus 166 ~~~~~~~~~~~~y~~l~~~~~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~ 245 (500)
T 4ekj_A 166 LDGFWEKADQAAYFELYDVTARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQD 245 (500)
T ss_dssp STTTSGGGCHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTCCCSEEEEEEESEEEEEECTTSCEE
T ss_pred CccCCCCCCHHHHHHHHHHHHHHHHhhCCccccccCccCCccccHHHHHHHHhcCCccceEEeeccCCCCCCcccccccc
Confidence 642 35678999999999999999999887543211111123333321 344567899999964211000
Q ss_pred ---cCChhhhHHHHHHHHHHHHHHHHhc--CCCcEEEeccCcccCCCC--CCHHHHHHHHHHHHHHHHhCCCcEEEEccc
Q 009560 413 ---NMSTVDNILFIYKSREAQLQALNNA--NGPLVFIGEWVNEWNVTS--GTQKDYQDFGSAQLEVYNAASFGWAYWTLK 485 (532)
Q Consensus 413 ---~~~~~~~i~~i~~~~~~~~~~~~~~--~g~pv~vGEwG~~~~~~~--a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k 485 (532)
....+.....+..- .+. +.+. .+.||+++|||....... .+......|+...+........+-.||++.
T Consensus 246 ~~~~~~~~~~~~~~~~~-r~~---l~~~~~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~~~~~~~~w~~~ 321 (500)
T 4ekj_A 246 TKLSPSPDAVVGDVRRV-REQ---IEASAFPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKGLVQAMSYWTYS 321 (500)
T ss_dssp EEECCSTTTTHHHHHHH-HHH---HHTTTSTTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTTTCSEEEESCSB
T ss_pred cccccCHHHHHHHHHHH-HHH---HHHhCCCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhhhCceeeEEEEE
Confidence 01122222222211 111 2222 357999999997653211 111233455544443333355678888876
Q ss_pred C
Q 009560 486 N 486 (532)
Q Consensus 486 ~ 486 (532)
.
T Consensus 322 d 322 (500)
T 4ekj_A 322 D 322 (500)
T ss_dssp S
T ss_pred e
Confidence 5
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=99.40 E-value=5.4e-14 Score=151.72 Aligned_cols=156 Identities=10% Similarity=0.175 Sum_probs=118.9
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ + .+.++-..+.|.+.++.+ ++|++.||++|+|++|+.+
T Consensus 30 wG~AtsA~QiEGa~~edGkg~SiwD~~~~~~p---~-~i~~~~~~~~A~D~Y~~~------~eDi~lm~~~G~~~~R~si 99 (512)
T 1v08_A 30 FGAATSAYQIEGAWNEDGKGESNWDHFCHNHP---E-RILDGSNSDIGANSYHMY------KTDVRLLKEMGMDAYRFSI 99 (512)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG---G-GSTTSCCCSSTTCHHHHH------HHHHHHHHHTTCSEEEEEC
T ss_pred EEEecchHhhcCCcCCCCCcCcceeeecccCC---C-cccCCCCCccccchHHHH------HHHHHHHHHhCCCeEeccc
Confidence 44567789999999 555 999997543200 0 111222336688888777 9999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCCh---hhHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPAS---DYISQTLDV 320 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~---~~~~~~~~~ 320 (532)
.|. .+.|.+. +.+++..++.++++|+.+.++||.++|+|++. +.+.... ....|.++ ...+.+.++
T Consensus 100 sWs-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~r~~c~~~~~f~~y 171 (512)
T 1v08_A 100 SWP-RILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHW-------DVPQALEEKYGGFLDKSHKSIVEDYTYF 171 (512)
T ss_dssp CHH-HHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGCTTSSHHHHHHHHH
T ss_pred CHh-hhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-------CCCHHHHhhCCCCCCccccchHHHHHHH
Confidence 875 4456553 57788999999999999999999999999874 2211111 12468888 999999999
Q ss_pred HHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 321 IDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 321 w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.+.+++||+++ |..|.++|||..
T Consensus 172 a~~~~~~~gd~--V~~W~t~NEp~~ 194 (512)
T 1v08_A 172 AKVCFDNFGDK--VKNWLTFNDPQT 194 (512)
T ss_dssp HHHHHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHHHHhCCc--ceEEEEcccchh
Confidence 99999999987 667999999963
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7e-14 Score=150.58 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=120.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+++......+ -.+.++-..+.|.+.++.+ ++|++.||++|+|++|++|
T Consensus 28 wG~AtaAyQiEGa~~edGkg~SiWD~~~~~~p----~~i~~~~~gd~A~D~YhrY------kEDi~Lm~elG~~~yRfSI 97 (513)
T 4atd_A 28 MGTGSSAYQIEGGARDGGRGPSIWDTFTHRRP----DMIRGGTNGDVAVDSYHLY------KEDVNILKNLGLDAYRFSI 97 (513)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG----GGSGGGCCTTTTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEechhhhhcCCcCCCCCcCchhhhhhhcCC----CcccCCCCCCcccchHHHH------HHHHHHHHHcCCCEEEEeC
Confidence 44567889999999 555 999997543200 0112333446788888888 9999999999999999999
Q ss_pred ccccccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~ 323 (532)
.|..+ .|.+ .+++++.++++++++|+.|.++||.++|+|||. +.+-... ....|.+++..+.|+++.+.
T Consensus 98 sWsRI-~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~yGGW~nr~~v~~F~~YA~~ 169 (513)
T 4atd_A 98 SWSRV-LPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHW-------DVPQALEDEYGGFLSPRIVDDFCEYAEL 169 (513)
T ss_dssp CHHHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTTHHHHHHHHHHH
T ss_pred cHHHc-CCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCC-------CCcHHHHHHcCCcCCHHHHHHHHHHHHH
Confidence 98654 4544 246788899999999999999999999999983 4332111 13579999999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCC
Q 009560 324 LASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~ 344 (532)
+++||++.... |-.+|||.
T Consensus 170 ~f~~fgdrVk~--WiT~NEp~ 188 (513)
T 4atd_A 170 CFWEFGDRVKH--WMTLNEPW 188 (513)
T ss_dssp HHHHHTTTCCE--EEEEECHH
T ss_pred HHHHhcCcCce--EEEccCcc
Confidence 99999997665 55999996
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=7.8e-14 Score=150.25 Aligned_cols=154 Identities=12% Similarity=0.167 Sum_probs=121.0
Q ss_pred CceEEeCCCCCCCC--CCC-Ccceeeeccc--CCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEE
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVA--NNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRI 244 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~--~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRI 244 (532)
.|.-||.||.|+.| +++ ||+++..... ..+ .++-..+.|.+.++++ ++|++.||++|+|+.|+
T Consensus 40 wG~AtaA~QiEGa~~edGkg~SiWD~~~~~~p~~i------~~~~~gd~A~D~Yhry------kEDi~Lm~elG~~~yRf 107 (505)
T 3ptm_A 40 FGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKI------ADRSNGDVASDSYHLY------KEDVRLMKDMGMDAYRF 107 (505)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGGGS------TTSCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEE
T ss_pred EEEEChhHhhcCCcCCCCCcCchhhhhhhcCCCcc------cCCCCCCccccHHHHH------HHHHHHHHHcCCCEEEe
Confidence 45567889999999 555 9999975432 111 1223346788888888 99999999999999999
Q ss_pred ccccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHH
Q 009560 245 PVGWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVI 321 (532)
Q Consensus 245 pv~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w 321 (532)
+|.|..+ .|.+. ++.++..++.++++|+.|.++||.++|+||| |+.+-.... ...|.+++..+.++++.
T Consensus 108 SIsWsRI-~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~H-------wDlP~~L~~~yGGW~nr~~v~~F~~YA 179 (505)
T 3ptm_A 108 SISWTRI-LPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFH-------WDSPQALEDKYNGFLSPNIINDFKDYA 179 (505)
T ss_dssp ECCHHHH-STTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-------SCCBHHHHHHHCGGGSTHHHHHHHHHH
T ss_pred eccHHHc-CcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecC-------CCCcHHHHHhcCCcCCHHHHHHHHHHH
Confidence 9998554 45442 4668899999999999999999999999998 443322111 35799999999999999
Q ss_pred HHHHHHhCCCCcEEEEEeccCCCC
Q 009560 322 DFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 322 ~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+.+++||++.... |-.+|||..
T Consensus 180 ~~~f~~fgDrVk~--W~T~NEp~~ 201 (505)
T 3ptm_A 180 EICFKEFGDRVKN--WITFNEPWT 201 (505)
T ss_dssp HHHHHHHTTTCCE--EEEEECHHH
T ss_pred HHHHHHhCccCce--EEEecCcch
Confidence 9999999997665 559999963
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.1e-14 Score=150.86 Aligned_cols=156 Identities=12% Similarity=0.163 Sum_probs=119.6
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+.+
T Consensus 80 wG~ATaAyQiEGa~~edGkg~SiWD~f~~~~p~----~i~~~~~gdvA~D~Y~~y------~eDi~lm~~lG~~~~RfsI 149 (565)
T 2dga_A 80 FGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPE----RISDMTNGDVAANSYHLY------EEDVKALKDMGMKVYRFSI 149 (565)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG----GSTTSCCTTTTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeEeCchHhhcCCcCCCCCcCeeeeeecccCCC----cccCCCCCccccchHHHH------HHHHHHHHHhCCCeEEecc
Confidence 45567889999999 555 9999975432000 111222346788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~la 325 (532)
.|. .+.|.+.+.+++..++.++++|+.+.++||.+||+|++. +.+..... ...|.++...+.+.++.+.++
T Consensus 150 sWs-RI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~r~~~~~F~~ya~~~~ 221 (565)
T 2dga_A 150 SWS-RILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHW-------DTPQALEDKYGGFLNRQIVDDYKQFAEVCF 221 (565)
T ss_dssp CHH-HHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHHHH
T ss_pred cHH-HhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-------CCcHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 875 445655357788999999999999999999999999773 22211111 246889999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
+||++. |..|.++|||..
T Consensus 222 ~~~gd~--V~~W~t~NEp~~ 239 (565)
T 2dga_A 222 KNFGDR--VKNWFTFNEPHT 239 (565)
T ss_dssp HHHTTT--CCEEEEEECHHH
T ss_pred HHhCCC--CceEEEeccchh
Confidence 999987 566889999963
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=9.3e-14 Score=150.95 Aligned_cols=156 Identities=15% Similarity=0.180 Sum_probs=119.5
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ + .+.++-..+.|.+.++.+ ++|++.||++|+|++|+.+
T Consensus 82 wG~ATsAyQiEGa~~edGkg~SiWD~f~~~~p--~--~i~~~~~gdvA~D~Yh~y------~eDi~lm~~lG~~~~R~si 151 (565)
T 1v02_A 82 FGAATSAYQIEGAWNEDGKGPSTWDHFCHNFP--E--WIVDRSNGDVAADSYHMY------AEDVRLLKEMGMDAYRFSI 151 (565)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG--G--GSTTSCCSSSTTCHHHHH------HHHHHHHHHTTCSEEEEEC
T ss_pred EEEEchHHHhcCCcCCCCCcCeeeeeecccCC--C--cccCCCCCcccccHHHHH------HHHHHHHHHhCCCeEEccc
Confidence 45567789999999 555 999997543200 0 112222346788888877 9999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~ 323 (532)
.|. .+.|.+. +.+++..++.+|++|+.+.++||.++|+|++. +.+.... ....|.+++..+.+.++.+.
T Consensus 152 sWs-Ri~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~r~~~~~f~~ya~~ 223 (565)
T 1v02_A 152 SWP-RILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW-------DTPQALVDAYGGFLDERIIKDYTDFAKV 223 (565)
T ss_dssp CHH-HHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHH
T ss_pred CHH-HhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-------CCCHHHHhhcCCCCCchHHHHHHHHHHH
Confidence 875 4456553 57788999999999999999999999999873 2221111 12468899999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCCC
Q 009560 324 LASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+++||++. |..|.++|||..
T Consensus 224 ~~~~~gd~--V~~W~t~NEp~~ 243 (565)
T 1v02_A 224 CFEKFGKT--VKNWLTFNEPET 243 (565)
T ss_dssp HHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHhCCc--ceEEEEccCchh
Confidence 99999987 566889999963
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.37 E-value=9.7e-14 Score=149.08 Aligned_cols=156 Identities=11% Similarity=0.127 Sum_probs=119.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+- .+.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 25 wG~AtaA~QiEGa~~edGkg~SiwD~~~~~~p~----~~~~~~~~~~A~D~Y~~~------~eDi~lm~~~G~~~~R~si 94 (490)
T 1cbg_A 25 FGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPE----KIKDRTNGDVAIDEYHRY------KEDIGIMKDMNLDAYRFSI 94 (490)
T ss_dssp EEEECCHHHHCCCSSSTTCCCBHHHHHHHHCGG----GSTTCCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EEEecchhhhcCCcCCCCCcCeeeeeecccCCC----cccCCCCCccccChHHHH------HHHHHHHHHhCCCeEEecc
Confidence 44567889999999 555 9999975432000 111222346788888877 9999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~ 323 (532)
.|. .+.|.+. +.+++..++.++++|+.+.++||.++|+|++. +.+..... ...|.++...+.+.++.+.
T Consensus 95 sWs-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~~~~~~~f~~ya~~ 166 (490)
T 1cbg_A 95 SWP-RVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW-------DVPQALEDEYRGFLGRNIVDDFRDYAEL 166 (490)
T ss_dssp CHH-HHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTTHHHHHHHHHHH
T ss_pred cHH-HhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCHhHHhhcCCcCCchHHHHHHHHHHH
Confidence 875 4456553 57788999999999999999999999999874 22211111 1468888999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCCC
Q 009560 324 LASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+++||+++ |..|.++|||..
T Consensus 167 ~~~~~gd~--V~~W~t~NEp~~ 186 (490)
T 1cbg_A 167 CFKEFGDR--VKHWITLNEPWG 186 (490)
T ss_dssp HHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHhCCc--ceEEEEccCchh
Confidence 99999987 556889999963
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.37 E-value=7.3e-11 Score=132.32 Aligned_cols=204 Identities=12% Similarity=0.126 Sum_probs=138.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+.- . +. . +++++.|.++||+|+.++... |.
T Consensus 321 ~~dl~l~k~~G~N~iR~~h----~----p~---~-------~~~~dlcDe~Gi~V~~E~~~~-~~--------------- 366 (692)
T 3fn9_A 321 DFDLAAIMDVGATTVRFAH----Y----QQ---S-------DYLYSRCDTLGLIIWAEIPCV-NR--------------- 366 (692)
T ss_dssp HHHHHHHHHHTCCEEEETT----S----CC---C-------HHHHHHHHHHTCEEEEECCCB-SC---------------
T ss_pred HHHHHHHHHCCCCEEEecC----C----CC---c-------HHHHHHHHHCCCEEEEccccc-CC---------------
Confidence 6899999999999999942 1 11 1 578899999999999997531 10
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~ 387 (532)
+.++. .+...+.++.+.+|++++|+|++|.+.||+... .+...++++++.+.+|+.||+++|..+..+...+ ..
T Consensus 367 ~~~~~-~~~~~~~~~~~v~r~rNHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~-~~- 440 (692)
T 3fn9_A 367 VTGYE-TENAQSQLRELIRQSFNHPSIYVWGLHNEVYQP---HEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMD-HP- 440 (692)
T ss_dssp CCSSC-HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSS---HHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTT-CT-
T ss_pred CCCHH-HHHHHHHHHHHHHHhcCCCcceEEEeccccCcc---cccHHHHHHHHHHHHHHHCCCCCEEEeCCCcccc-cc-
Confidence 12244 777889999999999999999999999999752 2456789999999999999999998875442111 00
Q ss_pred hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHh-cCCCcEEEeccCcccCC------C------
Q 009560 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNN-ANGPLVFIGEWVNEWNV------T------ 454 (532)
Q Consensus 388 ~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~-~~g~pv~vGEwG~~~~~------~------ 454 (532)
....-.|+++|.|..|... +.+..... +..+.+ ..++|++++|||+.... .
T Consensus 441 ----~~~~~Dv~~~n~Y~gWY~~----~~~~~~~~--------~~~~~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~ 504 (692)
T 3fn9_A 441 ----VNLNADIQGMNRYFGWYEK----KIQDIKPW--------VEQLEKDYPYQKLMLTEYGADANLAHQTEYLGDALNW 504 (692)
T ss_dssp ----TCSSSSEEEEECCBTTTBS----CGGGHHHH--------HHHHHHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCS
T ss_pred ----ccccCCcccccccccccCC----chHHHHHH--------HHHHHHHhcCccEEEEEEcCCcccccccccccccccc
Confidence 1234568999998643211 12211111 112222 34789999999984210 0
Q ss_pred -C-CCHHHH-HHHHHHHHHHHHh--CCCcEEEEcccCC
Q 009560 455 -S-GTQKDY-QDFGSAQLEVYNA--ASFGWAYWTLKND 487 (532)
Q Consensus 455 -~-a~~~~~-~~~~~~ql~~~~~--~~~Gw~yW~~k~e 487 (532)
+ -..+.+ ..+.+...+++.+ .-+|-+.|++..-
T Consensus 505 ~~~~~see~Q~~~~~~~~~~~~~~p~~~G~fvW~~~D~ 542 (692)
T 3fn9_A 505 GKPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDF 542 (692)
T ss_dssp SSSCCBHHHHHHHHHHHHHHHHHCTTSCEEEESCSBCE
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEEEeeec
Confidence 0 022333 4556667777765 4679999998874
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-11 Score=133.86 Aligned_cols=218 Identities=13% Similarity=0.144 Sum_probs=130.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||+ | ..+|... . |+.++.|.++||+||+++|...++- ...
T Consensus 90 ~rDi~LmK~~GiN~VRv----y-~~~P~~~------~----d~~ldl~~~~GIyVIle~~~p~~~i--------~~~--- 143 (555)
T 2w61_A 90 LRDIPFLKMLGVNTLRV----Y-AIDPTKS------H----DICMEALSAEGMYVLLDLSEPDISI--------NRE--- 143 (555)
T ss_dssp HHHHHHHHHHTCSEEEE----C-CCCTTSC------C----HHHHHHHHHTTCEEEEESCBTTBSC--------CTT---
T ss_pred HHHHHHHHHcCCCEEEE----e-ccCCCCC------h----HHHHHHHHhcCCEEEEeCCCCCccc--------ccC---
Confidence 78999999999999999 3 2343321 1 6888899999999999998631111 001
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc----ccHHHHHHHHHHHHHhhCCCcEEEEeCC-CCCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL----DILVPYYKQGYQIVRKYSPTAYVIVCQR-IGNA 382 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~----~~l~~~~~~~~~aIR~~~~~~~Viv~~~-~~~~ 382 (532)
++...+.+.+..+.+++||+++|+|++|.+-||+.... .. ..+....+++.+.||+.++.. |.|+-. ....
T Consensus 144 --~P~~~~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~-~~~~~~~y~~aa~r~~~~~lk~~d~R~-IpVgy~~ad~~ 219 (555)
T 2w61_A 144 --NPSWDVHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDH-TNTFASPFVKAAIRDAKEYISHSNHRK-IPVGYSTNDDA 219 (555)
T ss_dssp --SCCCCHHHHHHHHHHHHHHTTCTTEEEEEEEESSSCST-TCGGGHHHHHHHHHHHHHHHHHSSSCC-CCEEEEECCCT
T ss_pred --CHHHHHHHHHHHHHHHHHcCCCCcEEEEEeCccccCCC-ccchhhHHHHHHHHHHHHHHHhcCCCc-ceeeccccccc
Confidence 23345566788899999999999999999999997632 22 235556667777888887543 334311 1111
Q ss_pred Cc-hhhhhccC--CCCcEEEEeeecccCCC-ccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCH
Q 009560 383 DP-LELYQANI--GLHNIVVDLHYYNLFDT-FFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQ 458 (532)
Q Consensus 383 ~~-~~~~~~~~--~~~nvv~s~H~Y~~f~~-~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~ 458 (532)
+. ..+.++.. ...-.++++|.|..+.. .|. ....+. + ...+ ...+.|+|++|||.....++...
T Consensus 220 ~~r~~la~yl~c~~~~~D~~~~N~Y~w~g~s~f~----~sg~~~----~---~~~~-~~~~~Pi~vsEyG~~~~~pg~~~ 287 (555)
T 2w61_A 220 MTRDNLARYFVCGDVKADFYGINMYEWCGYSTYG----TSGYRE----R---TKEF-EGYPIPVFFSEFGCNLVRPRPFT 287 (555)
T ss_dssp TTHHHHHHHTTBTTCCCSCEEEEECCCCSSCCHH----HHSHHH----H---HHHH-TTCSSCEEEEEECCCSSSSCCCT
T ss_pred hhhHHHHHHhccCCCCcCEEEEeCCccccccccc----chhHHH----H---HHHh-hCCCCCEEEEeCCCccCCCCchH
Confidence 11 11222211 24557899999974321 111 000111 1 1112 23478999999998765333333
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCC
Q 009560 459 KDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHW 491 (532)
Q Consensus 459 ~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~W 491 (532)
+ ++..+... +...-.|-+.|.|-.|...|
T Consensus 288 E-~~a~y~~~---m~~~~sGG~Ife~~dE~nny 316 (555)
T 2w61_A 288 E-VSALYGNK---MSSVWSGGLAYMYFEEENEY 316 (555)
T ss_dssp H-HHHHTSHH---HHTTCCEEEESCSBCCTTCC
T ss_pred H-HHHHHhhc---ccccccceEEEEEecccCCc
Confidence 3 32222221 12234577999999873333
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-13 Score=148.02 Aligned_cols=154 Identities=13% Similarity=0.115 Sum_probs=116.5
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+. +.++-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 15 wG~AtaA~QiEGa~~edGkg~SiwD~~~~~~~~-----~~~~~~~~~a~D~Y~~y------~eDi~lm~~lG~~~~R~si 83 (473)
T 3ahy_A 15 WGFATAAYQIEGAVDQDGRGPSIWDTFCAQPGK-----IADGSSGVTACDSYNRT------AEDIALLKSLGAKSYRFSI 83 (473)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHHSTTS-----STTSCCSSSTTCGGGCH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEecchhhhCCCcCCCCCcCeeeEEeeccCCc-----ccCCCCCccccchHHHH------HHHHHHHHHhCCCeEEccc
Confidence 44567889999999 555 9999975432110 11222335666666666 9999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCC-hhhHHHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPA-SDYISQTLDVID 322 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~-~~~~~~~~~~w~ 322 (532)
.|. .+.|.+. +.+++..++.+|++|+.+.++||.+||+|++. +.+..... ...|.+ +...+.++++.+
T Consensus 84 sWs-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~~~~~~~~f~~ya~ 155 (473)
T 3ahy_A 84 SWS-RIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHW-------DLPEGLHQRYGGLLNRTEFPLDFENYAR 155 (473)
T ss_dssp CHH-HHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGCTTHHHHHHHHHHH
T ss_pred cHH-hhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cCCHHHHhhcCCCcCchhhHHHHHHHHH
Confidence 875 4456553 57788999999999999999999999999873 22211111 246888 999999999999
Q ss_pred HHHHHhCCCCcEEEEEeccCCCC
Q 009560 323 FLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 323 ~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.+++|| +. |..|.++|||..
T Consensus 156 ~~~~~~-dr--V~~W~t~NEp~~ 175 (473)
T 3ahy_A 156 VMFRAL-PK--VRNWITFNEPLC 175 (473)
T ss_dssp HHHHHC-TT--CCEEEEEECHHH
T ss_pred HHHHHh-Cc--CCEEEecCchhh
Confidence 999999 75 556889999963
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.2e-10 Score=130.43 Aligned_cols=209 Identities=13% Similarity=0.131 Sum_probs=137.7
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||+.- . + . . ++++++|.++||+|+.++..... .++.. ...
T Consensus 307 ~~dl~~~k~~G~N~vR~~h----~--p--~---~-------~~~~~~cD~~Gl~V~~e~~~~~~--~~~~~------~~~ 360 (667)
T 3cmg_A 307 EEDVALMREMGVNAIRLAH----Y--P--Q---A-------TYMYDLMDKHGIVTWAEIPFVGP--GGYAD------KGF 360 (667)
T ss_dssp HHHHHHHHHTTCCEEEETT----S--C--C---C-------HHHHHHHHHHTCEEEEECCCBCC--TTSSS------CSC
T ss_pred HHHHHHHHHCCCCEEEecC----C--C--C---C-------HHHHHHHHHCCCEEEEcccccCc--Ccccc------ccc
Confidence 6799999999999999942 1 1 1 1 47889999999999999864210 01110 111
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~ 387 (532)
..++...+.+.+.++.+.+|++++|+|++|.+.|||... .+....+.+++.+.||+.||+++|..+..+. + .+
T Consensus 361 ~~~~~~~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~---~~~~~~~~~~l~~~vk~~DptRpvt~~~~~~--~--~~ 433 (667)
T 3cmg_A 361 VDQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEV---GDNPVEYVKELNALAKQEDPTRPTTSASNQD--G--NL 433 (667)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSS---SSCCHHHHHHHHHHHHHHCTTSCEEEEECCC--S--GG
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCCEEEEEecccCCCcc---chhHHHHHHHHHHHHHHHCCCCcEEEeCCCC--C--cc
Confidence 234677888999999999999999999999999999642 2345678999999999999999998765431 1 11
Q ss_pred hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH-HhcCCCcEEEeccCcccCC------C-C----
Q 009560 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL-NNANGPLVFIGEWVNEWNV------T-S---- 455 (532)
Q Consensus 388 ~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~-~~~~g~pv~vGEwG~~~~~------~-~---- 455 (532)
...-.++++|+|..+.. . ..+. +... +..+ +...+.|++++|||..... + +
T Consensus 434 -----~~~~Dv~~~n~Y~~wy~---~-~~~~----~~~~----~~~~~~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~ 496 (667)
T 3cmg_A 434 -----NFITENIAWNRYDGWYG---S-TPKT----LATF----LDRTHKKHPELRIGISEYGAGASIYHQQDSLKQPSAS 496 (667)
T ss_dssp -----GGSSSSEEEECCTTTSS---S-CTHH----HHHH----HHHHHHHCTTCCEEEEEECCCCBTTCCCSSCCCCCTT
T ss_pred -----ccccCEEEecccccccc---C-chhh----hHHH----HHHHHHHCCCCcEEEEEECCCCCcccccccccccccc
Confidence 11235699999975311 1 1111 1111 1111 2234789999999974210 0 0
Q ss_pred ---CCHHHHHHHHHHHHHHHHh--CCCcEEEEcccC
Q 009560 456 ---GTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKN 486 (532)
Q Consensus 456 ---a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~ 486 (532)
.+.+....+.+.+.+.+.+ ..+|-++|++..
T Consensus 497 ~~~~~e~~q~~~~~~~~~~~~~~~~~~G~fvW~~~D 532 (667)
T 3cmg_A 497 GWWHPENWQTYYHMENWKIIAERPFVWGTFVWNMFD 532 (667)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHTCTTCCCEEESCSBC
T ss_pred cccCcHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Confidence 1122333455666666664 557999999875
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-13 Score=148.45 Aligned_cols=156 Identities=12% Similarity=0.173 Sum_probs=119.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| |++ ||+++......+ + .+..+-..+.|.+.++.+ ++|++.||++|+|++|+++
T Consensus 49 wG~AtaA~QiEGa~~edGkg~SiWD~f~~~~p--~--~i~~~~~gd~A~D~Y~~y------~eDi~lm~~lG~~~~R~si 118 (532)
T 2jf7_A 49 FGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSP--A--KISDGSNGNQAINCYHMY------KEDIKIMKQTGLESYRFSI 118 (532)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG--G--GSTTSCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EEEecchHhhcCCcCCCCCcCeeeeEccccCC--C--cccCCCCcchhhhHHHHH------HHHHHHHHHcCCCeEeccc
Confidence 45567789999999 555 999997543200 0 111222346788888877 9999999999999999999
Q ss_pred ccccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCC-CCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDG-TTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g-~~~W~~~~~~~~~~~~w~~ 323 (532)
.|. .+.|.+. +.+++.+++.+|++|+.+.++||.++|+|+|. +.+..... ...|.++...+.+.++.+.
T Consensus 119 sWs-Ri~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~r~~~~~f~~ya~~ 190 (532)
T 2jf7_A 119 SWS-RVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHW-------DLPQALEDEYGGFLSHRIVDDFCEYAEF 190 (532)
T ss_dssp CHH-HHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHH
T ss_pred cHH-HhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC-------CCCHHHHhhcCCCCCchHHHHHHHHHHH
Confidence 885 4456552 57788999999999999999999999999873 22211111 2468899999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCCC
Q 009560 324 LASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+++||+++ |..|.++|||..
T Consensus 191 ~~~~~gd~--V~~W~t~NEp~~ 210 (532)
T 2jf7_A 191 CFWEFGDK--IKYWTTFNEPHT 210 (532)
T ss_dssp HHHHHGGG--CSEEEEEECHHH
T ss_pred HHHHhCCc--CceEEEccCchh
Confidence 99999986 555889999963
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.8e-12 Score=141.70 Aligned_cols=145 Identities=17% Similarity=0.207 Sum_probs=108.1
Q ss_pred hhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC--C-------
Q 009560 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA--P------- 290 (532)
Q Consensus 220 ~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~--p------- 290 (532)
+||.....++|++.||++|+|+||+++..|...+|.++ .|+ ++.||++|+.|+++||+|||.+++. |
T Consensus 18 e~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g-~~~---f~~ld~~i~~~~~~Gi~vil~~~~~~~P~Wl~~~~ 93 (675)
T 3tty_A 18 EQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEV-SYD---FTWLDDIIERLTKENIYLCLATSTGAHPAWMAKKY 93 (675)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSS-CBC---CHHHHHHHHHHHHTTCEEEEECCTTSCCHHHHHHC
T ss_pred hhCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCC-ccC---HHHHHHHHHHHHHCCCEEEEeCCCCCCChhhhhcC
Confidence 35655556999999999999999999844566777654 453 7899999999999999999998742 1
Q ss_pred -CC----CCCCC-CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC---CcccHHHHHHHHH
Q 009560 291 -GS----QNGME-HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV---PLDILVPYYKQGY 361 (532)
Q Consensus 291 -Gs----qn~~~-~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~---~~~~l~~~~~~~~ 361 (532)
.. .+|.. ..|.+ ....+.++..++.+.++++.|++||+++|.|++|++.|||..... ..+.+++|+++.|
T Consensus 94 Pe~l~~d~~G~~~~~g~r-~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g~~~y~~~~~~~Fr~wLk~kY 172 (675)
T 3tty_A 94 PDVLRVDYEGRKRKFGGR-HNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYGGYCYCDNCEKQFRVWLKERY 172 (675)
T ss_dssp GGGBCBCTTSCBCCSCSS-SCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCCCCCCSHHHHHHHHHHHHHHH
T ss_pred CceeeecCCCcCcccCCc-cCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccCCCcCCHHHHHHHHHHHHHHh
Confidence 10 01100 01111 122456789999999999999999999999999999999985422 2456888988888
Q ss_pred HHHHhhCC
Q 009560 362 QIVRKYSP 369 (532)
Q Consensus 362 ~aIR~~~~ 369 (532)
..|++.++
T Consensus 173 ~ti~~LN~ 180 (675)
T 3tty_A 173 GTLEALNK 180 (675)
T ss_dssp SSHHHHHH
T ss_pred cCHHHHHH
Confidence 77776543
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=6.3e-13 Score=143.02 Aligned_cols=155 Identities=9% Similarity=0.023 Sum_probs=117.2
Q ss_pred CceEEeCCCCCCCCCCC-CcceeeecccCCCCcccee-ecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccc
Q 009560 170 GNQLTSDYPGMPGWDDN-AATFEMAIVANNLHGDYQL-ANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVG 247 (532)
Q Consensus 170 ~~~v~ad~~~~~~W~~~-ps~f~~~~~~~~~~~e~~l-~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ 247 (532)
.|.-||.||.++. |++ ||+++......+- .+ .++-..+.|.+.++.+ ++|++.||++|+|++|+++.
T Consensus 31 wG~AtaA~QiEGa-dGkg~SiWD~~~~~~~~----~~~~~~~~~~~A~D~Y~~~------~eDi~lm~~lG~~~~R~sis 99 (501)
T 1e4m_M 31 FGVASSAYQIEGT-IGRGLNIWDGFTHRYPN----KSGPDHGNGDTTCDSFSYW------QKDIDVLDELNATGYRFSIA 99 (501)
T ss_dssp EEEECCHHHHSCS-TTSCCBHHHHHHHHSHH----HHCTTCCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEECC
T ss_pred EEEeChhhhcCCC-CCCCCchheeeccccCC----ccccCCCCCcccccHHHHH------HHHHHHHHHhCCCeEEcccc
Confidence 3446677888887 765 9999875431000 01 1222346788888877 99999999999999999998
Q ss_pred cccccCCCCC--CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC-CCCCCCChhhHHHHHHHHHHH
Q 009560 248 WWIAFDPDPP--APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD-GTTDWPASDYISQTLDVIDFL 324 (532)
Q Consensus 248 ww~~~~~~~~--~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~-g~~~W~~~~~~~~~~~~w~~l 324 (532)
|- .+.|.+. +.+++..++.++++|+.+.++||.+||+|+|. +.+.... ....|.++...+.+.++.+.+
T Consensus 100 Ws-Ri~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H~-------d~P~~L~~~yggw~~r~~~~~f~~ya~~~ 171 (501)
T 1e4m_M 100 WS-RIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHW-------DLPQTLQDEYEGFLDPQIIDDFKDYADLC 171 (501)
T ss_dssp HH-HHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHHH
T ss_pred HH-hhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cCCHHHHHhcCCCCCchHHHHHHHHHHHH
Confidence 75 4456552 57788899999999999999999999999874 2221111 124688999999999999999
Q ss_pred HHHhCCCCcEEEEEeccCCCC
Q 009560 325 ASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 325 a~ry~~~p~v~g~EL~NEP~~ 345 (532)
++||+++ |..|.++|||..
T Consensus 172 ~~~~gd~--V~~W~t~NEp~~ 190 (501)
T 1e4m_M 172 FEEFGDS--VKYWLTINQLYS 190 (501)
T ss_dssp HHHHTTT--CCEEEEESCTTH
T ss_pred HHHhCCC--CCEEEEecCchh
Confidence 9999987 556889999974
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.28 E-value=9.2e-11 Score=121.25 Aligned_cols=234 Identities=14% Similarity=0.221 Sum_probs=147.3
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE---cCCC-CCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID---LHAA-PGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD---lH~~-pGsqn~~~~sg~ 301 (532)
++++..|.+.+||.|++ .+.| ...+|.++ .| .+..+|+++++|+++||+|+.. .|.. |+ |-..
T Consensus 52 ~~~~~~~~~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~-- 120 (347)
T 1xyz_A 52 DPTYNSILQREFSMVVCENEMKF-DALQPRQN-VF---DFSKGDQLLAFAERNGMQMRGHTLIWHNQNPS----WLTN-- 120 (347)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHHT--
T ss_pred hHHHHHHHHhcCCEEEECCcccH-HHhcCCCC-cC---ChHHHHHHHHHHHHCCCEEEEEeeeccccCcH----HHhc--
Confidence 36788888899999999 7776 45566554 44 3688999999999999999743 2421 11 1111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---cccH-----HHHHHHHHHHHHhhCCCcEE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LDIL-----VPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---~~~l-----~~~~~~~~~aIR~~~~~~~V 373 (532)
..|.++..++++.++++.+++||+++ |.+|++.|||...... ...| .+|++.+++++|+++|++.+
T Consensus 121 ----~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L 194 (347)
T 1xyz_A 121 ----GNWNRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALL 194 (347)
T ss_dssp ----SCCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHhCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEE
Confidence 12445678999999999999999985 7789999999864211 1112 36889999999999999998
Q ss_pred EEeCCCCCC-Cc--hh---hhh-cc-CCC--CcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 009560 374 IVCQRIGNA-DP--LE---LYQ-AN-IGL--HNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVF 443 (532)
Q Consensus 374 iv~~~~~~~-~~--~~---~~~-~~-~~~--~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~ 443 (532)
++.+..... .. .. +.. +. .+. +-+-+..|....+ +.. .+..+ .+.+..++.. |.||+
T Consensus 195 ~~Ndyn~~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~-------~~~-~~~~~----~~~l~~~a~~-G~pi~ 261 (347)
T 1xyz_A 195 FYNDYNIEDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGM-------SPE-YLASI----DQNIKRYAEI-GVIVS 261 (347)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC-------CHH-HHHHH----HHHHHHHHHT-TCEEE
T ss_pred EeccCccccccchHHHHHHHHHHHHHCCCCcceEEEeeecCCCC-------Cch-hHHHH----HHHHHHHHhc-CCceE
Confidence 887532111 11 11 111 10 232 3334444765321 111 01122 2334445543 78999
Q ss_pred EeccCcccCCCCCC---HHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 444 IGEWVNEWNVTSGT---QKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 444 vGEwG~~~~~~~a~---~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
|+|++.....+... .+...++++..+.++-+ ...|-++|.+.. ...|-
T Consensus 262 iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~~~v~git~Wg~~D-~~sW~ 314 (347)
T 1xyz_A 262 FTEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTD-KYTWI 314 (347)
T ss_dssp EEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBT-TSCSH
T ss_pred EEeccccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCcc-CCccc
Confidence 99999875322211 12334566666666654 447999999887 45563
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=8.5e-11 Score=119.93 Aligned_cols=229 Identities=17% Similarity=0.196 Sum_probs=145.6
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE-c--CCC-CCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID-L--HAA-PGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-l--H~~-pGsqn~~~~sg~ 301 (532)
+.+++.+.+.+||.||+ .+.| ...+|.++ .| .+..+|+++++|+++||+|+.. + |.. |. |-
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g-~~---~~~~~D~~~~~a~~~gi~v~ghtl~W~~~~P~----W~---- 92 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKW-DATEPSQN-SF---SFGAGDRVASYAADTGKELYGHTLVWHSQLPD----WA---- 92 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEESSSCCH----HH----
T ss_pred CHHHHHHHHhcCCEEEECCcccH-HHhCCCCC-cC---ChHHHHHHHHHHHHCCCEEEEEeeecCCCCCH----HH----
Confidence 57888888899999999 6776 55666554 44 3688999999999999998653 2 321 10 10
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-CC--cccH-----HHHHHHHHHHHHhhCCCcEE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-VP--LDIL-----VPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-~~--~~~l-----~~~~~~~~~aIR~~~~~~~V 373 (532)
..+..+..++++.++++.+++||++. |.+|++.|||.... .. ...| .+|++.+++++|+++|++.|
T Consensus 93 ----~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~a~l 166 (315)
T 3cui_A 93 ----KNLNGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKL 166 (315)
T ss_dssp ----HTCCHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEE
T ss_pred ----hcCCHHHHHHHHHHHHHHHHHHcCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCCCEE
Confidence 01334678899999999999999984 88899999998642 11 0112 46889999999999999999
Q ss_pred EEeCCCC-CCCc-----hhhhh----ccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 009560 374 IVCQRIG-NADP-----LELYQ----ANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVF 443 (532)
Q Consensus 374 iv~~~~~-~~~~-----~~~~~----~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~ 443 (532)
++.+... .... ..+.. ...+.+-+-+..|..... .++. + .+.+..++ ..|.||+
T Consensus 167 ~~ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-------~~~~----~----~~~l~~~a-~~g~pv~ 230 (315)
T 3cui_A 167 CINDYNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQ-------VPGD----F----RQNLQRFA-DLGVDVR 230 (315)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTC-------CCTT----H----HHHHHHHH-TTTCEEE
T ss_pred EECCccccCcchHHHHHHHHHHHHHHCCCcccEEEeeeecCCCC-------CHHH----H----HHHHHHHH-hcCCceE
Confidence 8865311 1111 11111 112233344444654321 1121 1 12333444 3478999
Q ss_pred EeccCcccCCCCC--CHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 444 IGEWVNEWNVTSG--TQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 444 vGEwG~~~~~~~a--~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
|+|++.....+.. +.+...++++..+.++.+ ...|.++|.+.. ...|-
T Consensus 231 iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D-~~sW~ 282 (315)
T 3cui_A 231 ITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITD-KYSWV 282 (315)
T ss_dssp EEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TTCSH
T ss_pred EEecccccCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEEEeCCC-CCccC
Confidence 9999987432221 122344566666766654 347999999887 44564
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-10 Score=117.57 Aligned_cols=225 Identities=16% Similarity=0.190 Sum_probs=144.0
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc---CCC-CCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL---HAA-PGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~-pGsqn~~~~sg~ 301 (532)
+++++.+.+.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|+... |.. |+ |-
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~lvW~~~~P~----W~---- 92 (302)
T 1nq6_A 26 EAAYASTLDAQFGSVTPENEMKW-DAVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHSQLPG----WV---- 92 (302)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEESTTCCT----TT----
T ss_pred CHHHHHHHHhcCCeEEEcCceee-ccccCCCC-cC---CcHHHHHHHHHHHHCCCEEEEEecccCCCCCh----hh----
Confidence 57788888899999999 6776 45666654 44 46889999999999999997432 421 21 11
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC--C--cccH-----HHHHHHHHHHHHhhCCCcE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV--P--LDIL-----VPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~--~--~~~l-----~~~~~~~~~aIR~~~~~~~ 372 (532)
..|.++...+++.++++.+++||++ .|.+|++.|||..... . ...+ .+|++.+++++|+.+|+..
T Consensus 93 ----~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~ 166 (302)
T 1nq6_A 93 ----SPLAATDLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAK 166 (302)
T ss_dssp ----TTSCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSE
T ss_pred ----hcCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCE
Confidence 1234567889999999999999997 5778999999976421 0 0112 3578999999999999988
Q ss_pred EEEeCCCCCC-Cc--hh---hhhc----cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcE
Q 009560 373 VIVCQRIGNA-DP--LE---LYQA----NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLV 442 (532)
Q Consensus 373 Viv~~~~~~~-~~--~~---~~~~----~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv 442 (532)
|++.+..... .. .. +... ..+-+-+-+..|.+... ..++. +. +.+..++ ..|.||
T Consensus 167 L~~Ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~------~~~~~----~~----~~l~~~a-~~g~pi 231 (302)
T 1nq6_A 167 LCYNDYNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNS------PVPSD----FQ----ANLQRFA-DLGVDV 231 (302)
T ss_dssp EEEEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTT----HH----HHHHHHH-TTTCEE
T ss_pred EEecccccccCchHHHHHHHHHHHHHHCCCCcceEEEEEeecCCC------CCHHH----HH----HHHHHHH-hcCCcE
Confidence 8886431100 10 11 1111 11234444444776321 01221 11 1223333 447899
Q ss_pred EEeccCcccCCCCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 443 FIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 443 ~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
+|+|++... +.+....+++..+.++.+ ...|.++|.+.. ...|-
T Consensus 232 ~iTE~di~~-----~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D-~~sW~ 277 (302)
T 1nq6_A 232 QITELDIEG-----SGSAQAANYTKVVNACLAVTRCTGITVWGVTD-KYSWR 277 (302)
T ss_dssp EEEEEEECC-----CHHHHHHHHHHHHHHHHTSTTEEEEEESCSCG-GGCTT
T ss_pred EEeeCCCCC-----chHHHHHHHHHHHHHHHhCCCceEEEEEcCCC-CCCcC
Confidence 999999762 233445566666666654 447999999887 34453
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-11 Score=111.30 Aligned_cols=91 Identities=21% Similarity=0.332 Sum_probs=78.0
Q ss_pred ccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCce
Q 009560 52 PSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCV 131 (532)
Q Consensus 52 ~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~ 131 (532)
...|+.+... ++.|+||| .+|||||++..| .|+|++++++.+|+|++..- ++.++||+.||+||+++..|.
T Consensus 61 ~E~f~l~~~~----~~~v~LRs-~~GkYLs~~~~G--~v~a~a~~~g~~E~F~l~~~-~G~~aLra~nG~yl~~~~~g~- 131 (155)
T 2yug_A 61 PEQFTAVKLS----DSRIALKS-GYGKYLGINSDG--LVVGRSDAIGPREQWEPVFQ-DGKMALLASNSCFIRCNEAGD- 131 (155)
T ss_dssp TTCEEEEECS----SSCEEEEE-TTSCBEEECSSS--BEEECCSSCCTTTBEEEECS-TTCCEEEETTSCBEEECSSSC-
T ss_pred cceEEEEECC----CCEEEEEe-CCCCEEEecCCC--cEEeccCCCCCCCEEEEEEE-CCEEEEEeCCCCEEEEcCCCc-
Confidence 3455544333 36999999 579999999986 89999999999999998777 889999999999999988775
Q ss_pred EEEeecCCCCCceEEEEEcC
Q 009560 132 VSATAKSPSTPETFEIERNN 151 (532)
Q Consensus 132 ~~a~~~~~~~~e~F~~v~~~ 151 (532)
|.|++++++.+|+|.+.-++
T Consensus 132 l~a~a~~~~~~E~f~v~l~~ 151 (155)
T 2yug_A 132 IEAKNKTAGEEEMIKIRSCA 151 (155)
T ss_dssp EEECCSCCCTTTCCEEEECS
T ss_pred EEEecCCCCCCcEEEEEEec
Confidence 99999999999999988764
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.1e-10 Score=112.92 Aligned_cols=219 Identities=17% Similarity=0.278 Sum_probs=137.8
Q ss_pred HHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNGMEHSASRD 303 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~~~~sg~~~ 303 (532)
.+.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|.... |. |
T Consensus 30 ~~~~~~-~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~----q---------- 89 (303)
T 1ta3_B 30 QNEAIV-ASQFGVITPENSMKW-DALEPSQG-NF---GWSGADYLVDYATQHNKKVRGHTLVWHS----Q---------- 89 (303)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSS----S----------
T ss_pred HHHHHH-HhhCCEEEECccccH-HHhCCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccC----C----------
Confidence 455555 679999999 7776 45666554 44 46889999999999999987543 32 1
Q ss_pred CCCCCC----C-hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--ccH-----HHHHHHHHHHHHhhCCCc
Q 009560 304 GTTDWP----A-SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--DIL-----VPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 304 g~~~W~----~-~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~~l-----~~~~~~~~~aIR~~~~~~ 371 (532)
.+.|. + +..++++.++++.+++||++. |.+||+.|||....... ..| .+|++.+++++|+++|++
T Consensus 90 -~P~W~~~~~~~~~~~~~~~~~i~~v~~rY~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a 166 (303)
T 1ta3_B 90 -LPSWVSSIGDANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDA 166 (303)
T ss_dssp -CCHHHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTS
T ss_pred -CChhhhcCCCHHHHHHHHHHHHHHHHHhcCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHCCCC
Confidence 11222 2 356789999999999999985 77899999997532111 111 478899999999999999
Q ss_pred EEEEeCCCC-CCC-c-----hhhhh----ccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCC
Q 009560 372 YVIVCQRIG-NAD-P-----LELYQ----ANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGP 440 (532)
Q Consensus 372 ~Viv~~~~~-~~~-~-----~~~~~----~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~ 440 (532)
.|++.+..- ..+ . ..+.+ ...+-+-+-+..|+...+. +.+. +. +.+..++ ..|.
T Consensus 167 ~L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~------~~~~----~~----~~l~~~a-~~G~ 231 (303)
T 1ta3_B 167 KLYINDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHW------SSTE----AA----GALSSLA-NTGV 231 (303)
T ss_dssp EEEEEESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCC------CGGG----HH----HHHHHHH-TTCC
T ss_pred EEEeccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCC------CHHH----HH----HHHHHHH-HCCC
Confidence 999875321 111 1 11222 1122344555568765421 1121 11 2233344 3477
Q ss_pred -cEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 441 -LVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 441 -pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
||.|+|++..- ...+.|+++++..++. ....|-++|.+.. ...|.
T Consensus 232 ~pi~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D-~~sW~ 277 (303)
T 1ta3_B 232 SEVAITELDIAG----AASSDYLNLLNACLNE--QKCVGITVWGVSD-KDSWR 277 (303)
T ss_dssp SEEEEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBG-GGSTT
T ss_pred CeEEEeeCCcCh----hHHHHHHHHHHHHHhC--CCceEEEEecCCc-CCCcc
Confidence 99999999762 3345555555433221 2457999999887 34564
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.13 E-value=6.1e-10 Score=113.40 Aligned_cols=223 Identities=17% Similarity=0.238 Sum_probs=139.7
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDG 304 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g 304 (532)
+++++.+.+.+||.|++ .+.| ...+|.++ .| .+..+|+++++|+++||+|.. |.. ..+|
T Consensus 27 ~~~~~~~~~~~fn~vt~eN~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~g--htlvW~~q----------- 88 (313)
T 1v0l_A 27 DSTYTSIAGREFNMVTAENEMKI-DATEPQRG-QF---NFSSADRVYNWAVQNGKQVRG--HTLAWHSQ----------- 88 (313)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEECSSS-----------
T ss_pred CHHHHHHHHhcCCEEEECCcccH-HHhCCCCC-cc---CchHHHHHHHHHHHCCCEEEE--EeecCcCc-----------
Confidence 46788888899999999 5766 45566554 33 468899999999999999854 321 0111
Q ss_pred CCCCC----ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---cccH-----HHHHHHHHHHHHhhCCCcE
Q 009560 305 TTDWP----ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LDIL-----VPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 305 ~~~W~----~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---~~~l-----~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.|. .+..++++.++++.+++||++. |..|++.|||.....+ ...+ .+|++.+++++|+++|+..
T Consensus 89 ~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~a~ 166 (313)
T 1v0l_A 89 QPGWMQSLSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAK 166 (313)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSE
T ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHHcCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhhCCCCE
Confidence 12232 3467889999999999999974 7789999999764211 1111 4688999999999999999
Q ss_pred EEEeCCCCCC-C-c--h---hhh----hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCc
Q 009560 373 VIVCQRIGNA-D-P--L---ELY----QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPL 441 (532)
Q Consensus 373 Viv~~~~~~~-~-~--~---~~~----~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~p 441 (532)
|++.+..-.. . . . .+. ....+-+-+-+..|+...+. +.+. +. +.+..++ ..|.|
T Consensus 167 L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~------~~~~----~~----~~l~~~a-~~G~p 231 (313)
T 1v0l_A 167 LCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN----FR----TTLQNFA-ALGVD 231 (313)
T ss_dssp EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HH----HHHHHHH-TTTCE
T ss_pred EEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCC------CHHH----HH----HHHHHHH-hcCCe
Confidence 9987532111 1 1 1 111 11122344445557643211 1121 11 2233344 34789
Q ss_pred EEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 442 VFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 442 v~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
|.|+|++.. ....+.|+++++..++. ....|-++|.+.. ...|-
T Consensus 232 v~iTEldi~----~~qa~~y~~~~~~~~~~--~~v~git~Wg~~D-~~sW~ 275 (313)
T 1v0l_A 232 VAITELDIQ----GAPASTYANVTNDCLAV--SRCLGITVWGVRD-SDSWR 275 (313)
T ss_dssp EEEEEEEET----TCCHHHHHHHHHHHHTC--TTEEEEEESCSBG-GGSTT
T ss_pred EEEEeCCcc----HHHHHHHHHHHHHHHhc--CCceEEEEECCCC-CCCcc
Confidence 999999976 22344555555543321 2457999998876 33453
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-09 Score=127.28 Aligned_cols=114 Identities=18% Similarity=0.289 Sum_probs=87.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+.. + ++ -+++++.|.++||+|+.++-. +. -+.. ...
T Consensus 352 ~~dl~lmK~~G~N~VR~~h-y-------p~----------~~~fydlcDe~Gi~V~~E~~~-~~--~g~~-------~~~ 403 (1024)
T 1yq2_A 352 REDLALMKRFNVNAIRTSH-Y-------PP----------HPRLLDLADEMGFWVILECDL-ET--HGFE-------AGG 403 (1024)
T ss_dssp HHHHHHHHHTTCCEEEETT-S-------CC----------CHHHHHHHHHHTCEEEEECSC-BC--GGGT-------TTT
T ss_pred HHHHHHHHHcCCCEEEecC-C-------CC----------CHHHHHHHHHCCCEEEEcCCc-cc--CCcc-------ccc
Confidence 6899999999999999941 1 11 147789999999999998721 00 0000 001
Q ss_pred C-----CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 308 W-----PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 308 W-----~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
| .+++..+.+.+.++.+.+|++++|+|++|.+.||+... ...+++++.||+.||+++|....
T Consensus 404 w~~~~~~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 404 WVENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp TTTCGGGCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 2 24677888999999999999999999999999999642 35678999999999999987654
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-09 Score=110.59 Aligned_cols=219 Identities=19% Similarity=0.279 Sum_probs=136.1
Q ss_pred HHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 230 DFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 230 d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|....-. .++| .+.
T Consensus 32 ~~~~~-~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtl~-W~~q-----------~P~ 93 (303)
T 1i1w_A 32 NAAII-QANFGQVTPENSMKW-DATEPSQG-NF---NFAGADYLVNWAQQNGKLIRGHTLV-WHSQ-----------LPS 93 (303)
T ss_dssp HHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEE-CSTT-----------CCH
T ss_pred HHHHH-HhhCCEEEECccccH-HHhCCCCC-cc---ChhhHHHHHHHHHHCCCEEEEeecc-ccCC-----------CCh
Confidence 44445 779999999 6665 55666654 44 4688999999999999998653210 0111 122
Q ss_pred CC----C-hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--ccH-----HHHHHHHHHHHHhhCCCcEEEE
Q 009560 308 WP----A-SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--DIL-----VPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 308 W~----~-~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~~l-----~~~~~~~~~aIR~~~~~~~Viv 375 (532)
|. + +..++++.++++.+++||++. |.+|++.|||....... ..| .+|++.+++++|+++|++.+++
T Consensus 94 W~~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~~ 171 (303)
T 1i1w_A 94 WVSSITDKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYI 171 (303)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhcCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCeEEe
Confidence 32 2 356889999999999999985 78899999997532111 111 3578999999999999999988
Q ss_pred eCCC-CCCC-c-----hhhhh-c-cCC--CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCC-cEE
Q 009560 376 CQRI-GNAD-P-----LELYQ-A-NIG--LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGP-LVF 443 (532)
Q Consensus 376 ~~~~-~~~~-~-----~~~~~-~-~~~--~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~-pv~ 443 (532)
.+.. .... . ..+.. + ..+ .+-+-+..|+... .+ ..+ .+.+..++ ..|. ||.
T Consensus 172 Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~--------~~----~~~----~~~l~~~a-~~G~~pi~ 234 (303)
T 1i1w_A 172 NDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAG--------QG----ASV----LQALPLLA-SAGTPEVA 234 (303)
T ss_dssp EESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT--------TH----HHH----HHHHHHHH-TTCCSEEE
T ss_pred ccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCC--------CH----HHH----HHHHHHHH-HCCCCeEE
Confidence 7532 1111 1 11111 1 122 3344444466432 11 222 23344444 3477 999
Q ss_pred EeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 444 IGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 444 vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
|+|++... ...+.|+++++..++. ....|-++|.+.. ...|.
T Consensus 235 iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D-~~sW~ 276 (303)
T 1i1w_A 235 ITELDVAG----ASSTDYVNVVNACLNV--SSCVGITVWGVAD-PDSWR 276 (303)
T ss_dssp EEEEEETT----CCHHHHHHHHHHHHHC--TTEEEEEESCSBG-GGSTT
T ss_pred EEeCCccc----hHHHHHHHHHHHHHhC--CCceEEEEEcCCC-CCCcC
Confidence 99999762 3345566655543321 2557999999887 34563
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.2e-10 Score=123.81 Aligned_cols=138 Identities=14% Similarity=0.183 Sum_probs=106.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||+.|.| ...+|.++ .|+-+.++.++++++.|+++||+||+.+.. -.+..|++.| .+.
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~W-~~hEP~~G-~ydf~gl~~l~~fl~la~e~GL~VIl~~gp--yi~~ew~~gG----~P~ 111 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVFW-NFHEPEEG-RYDFAGQKDIAAFCRLAQENGMYVIVRPGP--YVCAEWEMGG----LPW 111 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECCH-HHHCSSTT-CCCCSGGGCHHHHHHHHHHTTCEEEEECCS--CCCTTBGGGG----CCG
T ss_pred HHHHHHHHHcCCCEEEEcChH-HhcCCCCC-ccChhHHHHHHHHHHHHHHCCCEEEEecCc--ccccccccCC----Cch
Confidence 899999999999999999985 66677664 778888999999999999999999998642 1222222211 112
Q ss_pred C-----------CChhhHHHHHHHHHHHHHHhCC-----CCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhC-CC
Q 009560 308 W-----------PASDYISQTLDVIDFLASRYAK-----HPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYS-PT 370 (532)
Q Consensus 308 W-----------~~~~~~~~~~~~w~~la~ry~~-----~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~-~~ 370 (532)
| .++...+.+.++++.|++||++ +|.|++|+|-||+...+ .-..+.+.+.+.+|+.+ ++
T Consensus 112 Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg----~~~~y~~~l~~~l~~~g~~~ 187 (612)
T 3d3a_A 112 WLLKKKDIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFG----IDKPYISEIRDMVKQAGFTG 187 (612)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTC----CCHHHHHHHHHHHHHHTCCS
T ss_pred hhccCCCceecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccC----chHHHHHHHHHHHHHcCCCc
Confidence 2 2467889999999999999995 89999999999995311 13467788889999997 57
Q ss_pred cEEEEeC
Q 009560 371 AYVIVCQ 377 (532)
Q Consensus 371 ~~Viv~~ 377 (532)
.+++..+
T Consensus 188 vp~~~~~ 194 (612)
T 3d3a_A 188 VPLFQCD 194 (612)
T ss_dssp SCEEEEE
T ss_pred hhheecc
Confidence 7776654
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.07 E-value=7.5e-10 Score=117.88 Aligned_cols=218 Identities=16% Similarity=0.192 Sum_probs=136.3
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDG 304 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g 304 (532)
+++++.|.+.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|.. |.. ..+|
T Consensus 27 ~~~~~~~~~~~fn~~t~en~~kw-~~~ep~~g-~~---~f~~~D~~~~~a~~~gi~v~g--htlvW~~q----------- 88 (436)
T 2d1z_A 27 DSAYTTIASREFNMVTAENEMKI-DATEPQRG-QF---NFSAGDRVYNWAVQNGKQVRG--HTLAWHSQ----------- 88 (436)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEECSTT-----------
T ss_pred CHHHHHHHHHhCCeeeecccccc-ccccCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--EEEEeCCC-----------
Confidence 46788888899999999 5766 45666554 44 468899999999999999754 321 0111
Q ss_pred CCCC----CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC-------cccH-HHHHHHHHHHHHhhCCCcE
Q 009560 305 TTDW----PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP-------LDIL-VPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 305 ~~~W----~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~-------~~~l-~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.| ..+..++++.++++.+++||++ .|..|++.|||.....+ ...+ .+|++.+++++|+++|+..
T Consensus 89 ~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~dP~a~ 166 (436)
T 2d1z_A 89 QPGWMQSLSGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAK 166 (436)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHHCTTSE
T ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhhCCCCE
Confidence 1223 2356788999999999999996 67789999999753211 1122 5789999999999999999
Q ss_pred EEEeCCCCCC-C-c--hh---hhh-cc-CCCCcEEEEe--eecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCc
Q 009560 373 VIVCQRIGNA-D-P--LE---LYQ-AN-IGLHNIVVDL--HYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPL 441 (532)
Q Consensus 373 Viv~~~~~~~-~-~--~~---~~~-~~-~~~~nvv~s~--H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~p 441 (532)
|++.+..-.. . . .. +.. +. .+.+-.++.+ |+...+ .+.+. +. +.+..++ ..|.|
T Consensus 167 l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~------~~~~~----~~----~~l~~~a-~~g~~ 231 (436)
T 2d1z_A 167 LCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGS------PYNSN----FR----TTLQNFA-ALGVD 231 (436)
T ss_dssp EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTT----HH----HHHHHHH-TTTCE
T ss_pred EEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCC------CCHHH----HH----HHHHHHH-HcCCe
Confidence 9887532111 1 1 11 111 10 2222334454 653211 01221 11 2233344 34789
Q ss_pred EEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 442 VFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 442 v~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
|+|+|++.. ....+.|.++++..++ .....|-++|.+..
T Consensus 232 v~iTEldv~----~~qa~~y~~~~~~~~~--~~~~~gvt~Wg~~d 270 (436)
T 2d1z_A 232 VAITELDIQ----GASSSTYAAVTNDCLA--VSRCLGITVWGVRD 270 (436)
T ss_dssp EEEEEEEET----TCCHHHHHHHHHHHHT--CTTEEEEEESCSBG
T ss_pred EEEeecchh----HHHHHHHHHHHHHHHh--cCCceEEEeccccC
Confidence 999999976 2334455555554322 12347899998765
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=99.05 E-value=1e-08 Score=106.20 Aligned_cols=238 Identities=12% Similarity=0.087 Sum_probs=141.1
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc---CC-CCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL---HA-APGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~-~pGsqn~~~~sg~ 301 (532)
+++.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|+... |. .|+.... +..|.
T Consensus 29 ~~~~~l~-~~~fn~vt~en~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g~ 101 (356)
T 2dep_A 29 GQIAELY-KKHVNMLVAENAMKP-ASLQPTEG-NF---QWADADRIVQFAKENGMELRFHTLVWHNQTPDWFFL-DKEGK 101 (356)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCEEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccccCchhhhc-cCcCC
Confidence 4556666 679999999 6665 55666554 44 46899999999999999997642 43 2321100 00111
Q ss_pred CCCCC------CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC--CC--cccH-----HHHHHHHHHHHHh
Q 009560 302 RDGTT------DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT--VP--LDIL-----VPYYKQGYQIVRK 366 (532)
Q Consensus 302 ~~g~~------~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~--~~--~~~l-----~~~~~~~~~aIR~ 366 (532)
+.... ....+..++++.++++.+++||++ .|..|++.|||.... .. ...| .+|++.+++++|+
T Consensus 102 ~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~ 179 (356)
T 2dep_A 102 PMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRATRE 179 (356)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCccCChHHHhccHHHHHHHHHHHHH
Confidence 00000 112245678899999999999998 688899999997642 00 0112 4688999999999
Q ss_pred -hCCCcEEEEeCCCCCCCc------hhhhh-cc-CCCCcEEEEe--eecccCCCccccCChhhhHHHHHHHHHHHHHHHH
Q 009560 367 -YSPTAYVIVCQRIGNADP------LELYQ-AN-IGLHNIVVDL--HYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN 435 (532)
Q Consensus 367 -~~~~~~Viv~~~~~~~~~------~~~~~-~~-~~~~nvv~s~--H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 435 (532)
.+|++.|++.+.. ...+ ..+.. +. .+.+-..+.+ |+...+ .+. ..+. +.+..++
T Consensus 180 ~~dP~a~L~~Ndyn-~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~~----~~~~----~~l~~~a 244 (356)
T 2dep_A 180 AGGSDIKLYINDYN-TDDPVKRDILYELVKNLLEKGVPIDGVGHQTHIDIYN------PPV----ERII----ESIKKFA 244 (356)
T ss_dssp HHCSSSEEEEEESC-TTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCH----HHHH----HHHHHHH
T ss_pred hcCCCcEEEecccc-ccCcchHHHHHHHHHHHHHCCCCccEEEeeeeecCCC------CCH----HHHH----HHHHHHH
Confidence 9999999987632 1121 11211 11 2222334444 764211 111 2222 2334444
Q ss_pred hcCCCcEEEeccCcccCCC--------CCCH---HHHHHHHHHHHHHHHh---CCCcEEEEcccCCCCCC
Q 009560 436 NANGPLVFIGEWVNEWNVT--------SGTQ---KDYQDFGSAQLEVYNA---ASFGWAYWTLKNDRKHW 491 (532)
Q Consensus 436 ~~~g~pv~vGEwG~~~~~~--------~a~~---~~~~~~~~~ql~~~~~---~~~Gw~yW~~k~e~~~W 491 (532)
..|.||.|+|++...... ..+. +...++++..+.++.+ ...|-++|.+.. ...|
T Consensus 245 -~~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~gvt~Wg~~D-~~sW 312 (356)
T 2dep_A 245 -GLGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKENKDIVSAVVFWGISD-KYSW 312 (356)
T ss_dssp -TTTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTTGGGEEEEEESCSBT-TSCG
T ss_pred -hCCCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEecCcc-CCCc
Confidence 447899999999864311 1122 2233455666666654 245899999887 3445
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=99.02 E-value=1.5e-08 Score=103.98 Aligned_cols=232 Identities=15% Similarity=0.196 Sum_probs=139.9
Q ss_pred HHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE-c--CCC-CCCCCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID-L--HAA-PGSQNGMEHSASR 302 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-l--H~~-pGsqn~~~~sg~~ 302 (532)
++.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|... | |.. |+ |-... .
T Consensus 29 ~~~~~~-~~~fn~vt~eN~~kW-~~~ep~~g-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~~-~ 97 (331)
T 1n82_A 29 MQKQLL-IDHVNSITAENHMKF-EHLQPEEG-KF---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPD----WVFQD-G 97 (331)
T ss_dssp HTHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCG----GGGBC-S
T ss_pred HHHHHH-HhcCCEEEECCcccH-HHhCCCCC-cc---ChHHHHHHHHHHHHCCCEEEEEeeecCCCCCh----hhccC-C
Confidence 455556 569999999 6776 55666554 44 4688999999999999999753 2 532 22 21110 0
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC----cccH-----HHHHHHHHHHHHhhCCCcEE
Q 009560 303 DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP----LDIL-----VPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 303 ~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~----~~~l-----~~~~~~~~~aIR~~~~~~~V 373 (532)
.+ .....+..++++.++++.+++||++ .|.+|++.|||.....+ ...| .+|++.+++++|+++|++.+
T Consensus 98 ~g-~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L 174 (331)
T 1n82_A 98 QG-HFVSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALL 174 (331)
T ss_dssp SS-SBCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHHHHCCCCEE
Confidence 01 1223357789999999999999998 68889999999764211 1111 36889999999999999999
Q ss_pred EEeCCCCCCCc---h---hhhh-cc-CC--CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 009560 374 IVCQRIGNADP---L---ELYQ-AN-IG--LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVF 443 (532)
Q Consensus 374 iv~~~~~~~~~---~---~~~~-~~-~~--~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~ 443 (532)
++.+.. -..+ . .+.. +. .+ -+-+-+..|.-.. ..+. ..+. +.+..++ ..|.||.
T Consensus 175 ~~Ndyn-~~~~~k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~------~~~~----~~~~----~~l~~~a-~~G~pi~ 238 (331)
T 1n82_A 175 FYNDYN-ECFPEKREKIFALVKSLRDKGIPIHGIGMQAHWSLT------RPSL----DEIR----AAIERYA-SLGVVLH 238 (331)
T ss_dssp EEEESS-TTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESS------SSCH----HHHH----HHHHHHH-TTTCEEE
T ss_pred EEeccc-CCCchhHHHHHHHHHHHHHCCCccceEEeceecCCC------CCCH----HHHH----HHHHHHH-hcCCeEE
Confidence 886532 1121 1 1111 10 22 3344444465211 0111 2222 2333444 3478999
Q ss_pred EeccCcccCCC--------CCC---HHHHHHHHHHHHHHHHhCC--C-cEEEEcccCCCCCC
Q 009560 444 IGEWVNEWNVT--------SGT---QKDYQDFGSAQLEVYNAAS--F-GWAYWTLKNDRKHW 491 (532)
Q Consensus 444 vGEwG~~~~~~--------~a~---~~~~~~~~~~ql~~~~~~~--~-Gw~yW~~k~e~~~W 491 (532)
|+|++...... ..+ .+....+++..+.++-+.. + |-++|.+.. ...|
T Consensus 239 iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~v~git~Wg~~D-~~sW 299 (331)
T 1n82_A 239 ITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTFWGIAD-DHTW 299 (331)
T ss_dssp EEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBT-TSCG
T ss_pred EEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCcccEEEEECCCC-CCcc
Confidence 99999864311 111 2233455666666654432 4 489999887 3445
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-09 Score=123.30 Aligned_cols=116 Identities=17% Similarity=0.235 Sum_probs=86.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDGTT 306 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g~~ 306 (532)
++||+.||++|+|+||+.. + ++. +++++.|.++||+|+.++-.. .|.. + +. ..
T Consensus 375 ~~dl~lmK~~G~N~IR~~h-y-------p~~----------~~~ydlcDe~Gi~V~~E~~~~~~g~~--~---~~---~~ 428 (1010)
T 3bga_A 375 EQDIRLMKQHNINMVRNSH-Y-------PTH----------PYWYQLCDRYGLYMIDEANIESHGMG--Y---GP---AS 428 (1010)
T ss_dssp HHHHHHHHHTTCCEEEETT-S-------CCC----------HHHHHHHHHHTCEEEEECSCBCGGGC--S---ST---TC
T ss_pred HHHHHHHHHCCCCEEEeCC-C-------CCC----------HHHHHHHHHCCCEEEEccCccccCcc--c---cC---Cc
Confidence 6789999999999999941 1 111 367899999999999987210 0100 0 00 00
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
...+++..+.+.+.++.+.+|++++|+|++|.+.|||... ...+++++.||+.||+++|..+.
T Consensus 429 ~~~~~~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~~ 491 (1010)
T 3bga_A 429 LAKDSTWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYER 491 (1010)
T ss_dssp TTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeCC
Confidence 1124677888899999999999999999999999999642 24678999999999999987653
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.3e-09 Score=118.12 Aligned_cols=115 Identities=10% Similarity=0.158 Sum_probs=86.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEE--EEcCCCCCCCCCCCCC------
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI--IDLHAAPGSQNGMEHS------ 299 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VI--LDlH~~pGsqn~~~~s------ 299 (532)
++|++.||++|+|+||++| +|...+|..++.|+ ++.+|++|+.|+++||+|| |++|..+|....+.+.
T Consensus 32 ~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~WL 107 (516)
T 1vem_A 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWV 107 (516)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGGG
T ss_pred HHHHHHHHHcCCCEEEEec-chhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCCCCCCCHHH
Confidence 8999999999999999999 56777887334674 7889999999999999999 9998655421111111
Q ss_pred ---------------CCCC--CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEE----------------EEeccCCCCC
Q 009560 300 ---------------ASRD--GTTDWPASDYISQTLDVIDFLASRYAKHPALLG----------------IELLNEPSAA 346 (532)
Q Consensus 300 ---------------g~~~--g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g----------------~EL~NEP~~~ 346 (532)
|.+. +...|.+....+.+.++++.+++||++++.+++ |++-||...+
T Consensus 108 ~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 108 WNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp GGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCTT
T ss_pred HhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHHHccCCCEEEEeeccccccccccccccccccCcCCC
Confidence 1110 011144456778999999999999999999998 8999997543
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=98.98 E-value=2.6e-09 Score=124.32 Aligned_cols=115 Identities=14% Similarity=0.220 Sum_probs=86.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNGMEHSASRDGTT 306 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~~~~sg~~~g~~ 306 (532)
++||+.||++|+|+||+.. . ++. +++++.|.++||+|+.++-.. .|. +.. ..
T Consensus 373 ~~dl~lmK~~g~N~vR~~h-----y---p~~----------~~~~dlcDe~Gi~V~~E~~~~~~g~---~~~------~~ 425 (1023)
T 1jz7_A 373 VQDILLMKQNNFNAVRCSH-----Y---PNH----------PLWYTLCDRYGLYVVDEANIETHGM---VPM------NR 425 (1023)
T ss_dssp HHHHHHHHHTTCCEEECTT-----S---CCC----------HHHHHHHHHHTCEEEEECSCBCTTS---SST------TT
T ss_pred HHHHHHHHHcCCCEEEecC-----C---CCC----------HHHHHHHHHCCCEEEECCCcccCCc---ccc------Cc
Confidence 6799999999999999841 1 111 367899999999999987311 111 100 00
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
...+++..+.+.+.++.+.+|++++|+|++|.+.||+... ...+++++.||+.||+++|..+.
T Consensus 426 ~~~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 426 LTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp TTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecC
Confidence 1124677888999999999999999999999999999642 24678899999999999987653
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.96 E-value=4.2e-09 Score=113.55 Aligned_cols=235 Identities=15% Similarity=0.194 Sum_probs=143.1
Q ss_pred HHHHHHHHHcCCCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE---cCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID---LHAAPGSQNGMEHSASR 302 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD---lH~~pGsqn~~~~sg~~ 302 (532)
+++.+.+ +.+||.|++. +.| ...+|.++ .| .++.+|+++++|+++||+|... .|. +.....|-.. .
T Consensus 195 ~~~~~l~-~~~FN~vT~eNemKW-~~iEP~~G-~~---~f~~~D~ivd~a~~nGi~VrgHtLvWhs-~~q~P~Wv~~--~ 265 (530)
T 1us2_A 195 SREQAVV-KKHFNHLTAGNIMKM-SYMQPTEG-NF---NFTNADAFVDWATENNMTVHGHALVWHS-DYQVPNFMKN--W 265 (530)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECCC-GGGSCHHHHT--C
T ss_pred HHHHHHH-HhhCCeEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEecccccc-cccCchHHhc--C
Confidence 4666666 6799999995 665 55666554 44 4689999999999999998753 222 0000011100 0
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC--C----cccHH-------HHHHHHHHHHHhhCC
Q 009560 303 DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV--P----LDILV-------PYYKQGYQIVRKYSP 369 (532)
Q Consensus 303 ~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~--~----~~~l~-------~~~~~~~~aIR~~~~ 369 (532)
.+ ..+..++++.++++.+++||++++.|..|++.|||..... . ...|. +|+..++++.|+++|
T Consensus 266 ~G----s~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~AF~~Ar~aDP 341 (530)
T 1us2_A 266 AG----SAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADP 341 (530)
T ss_dssp CS----CHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCT
T ss_pred CC----CHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHHHHHHHHHHCC
Confidence 01 2346788999999999999998888999999999976321 1 11121 799999999999999
Q ss_pred CcEEEEeCCCCCCCc---hhhhh----cc-CC--CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCC
Q 009560 370 TAYVIVCQRIGNADP---LELYQ----AN-IG--LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439 (532)
Q Consensus 370 ~~~Viv~~~~~~~~~---~~~~~----~~-~~--~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g 439 (532)
+..|++.+..-..++ ..+.. +. .+ -+-+-+..|+...+ .+. ..++ +.+..++. .|
T Consensus 342 ~AkL~~NDYn~~~~~~k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~------p~~----~~i~----~~L~~~a~-lG 406 (530)
T 1us2_A 342 AVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY------PSI----ANIS----AAMKKVVD-LG 406 (530)
T ss_dssp TSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCH----HHHH----HHHHHHHT-TT
T ss_pred CCEEEecccccccccchhHHHHHHHHHHHHCCCceeEEEEeeecCCCC------CCH----HHHH----HHHHHHHh-cC
Confidence 999988753211111 11211 11 22 34444555764311 011 2222 23334443 47
Q ss_pred CcEEEeccCcccCCC-----------CCC---HHHHHHHHHHHHHHHH-----hCCCcEEEEcccCCCCCC
Q 009560 440 PLVFIGEWVNEWNVT-----------SGT---QKDYQDFGSAQLEVYN-----AASFGWAYWTLKNDRKHW 491 (532)
Q Consensus 440 ~pv~vGEwG~~~~~~-----------~a~---~~~~~~~~~~ql~~~~-----~~~~Gw~yW~~k~e~~~W 491 (532)
.||.|+|+....... ..+ .+...++++..+.++- ....|-++|.+.. ...|
T Consensus 407 lpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~~~~~~v~GIT~WG~~D-~~SW 476 (530)
T 1us2_A 407 LLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTD-ANTW 476 (530)
T ss_dssp CEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBG-GGCH
T ss_pred CeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhhccCCceEEEEEEcCcC-CCcc
Confidence 899999999764310 112 1223445566666662 2457999999887 3445
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.5e-08 Score=117.86 Aligned_cols=202 Identities=19% Similarity=0.244 Sum_probs=124.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCC--------CCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQ--------NGMEH 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsq--------n~~~~ 298 (532)
++||+.||++|+|+||+.- . |+.+ +..++|-++||+|+-+..-. +|.. ...+.
T Consensus 378 ~~Di~lmK~~g~NaVRtsH-----y---p~~~----------~fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~~ 439 (1032)
T 3oba_A 378 VRDLILMKKFNINAVRNSH-----Y---PNHP----------KVYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAEY 439 (1032)
T ss_dssp HHHHHHHHHTTCCEEECTT-----S---CCCT----------THHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCcEEEecC-----C---CChH----------HHHHHHHHCCCEEEEccccccCCccccccccccccccc
Confidence 6899999999999999841 1 1112 56789999999999986211 1100 00011
Q ss_pred CCCCC----CCCC--CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 299 SASRD----GTTD--WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 299 sg~~~----g~~~--W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
.+.+. .... -.+++..+.+.+-++.+.+|++++|+|+.|.+.||+... ...+++++.+|+.||+++
T Consensus 440 ~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptRp 511 (1032)
T 3oba_A 440 PDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTRL 511 (1032)
T ss_dssp TTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTSE
T ss_pred cccccccccccccccCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCCc
Confidence 11000 0000 124677888999999999999999999999999998642 245789999999999999
Q ss_pred EEEeCCCCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC
Q 009560 373 VIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN 452 (532)
Q Consensus 373 Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~ 452 (532)
|...+.+. ...-.+++. +|.. .+ .+....... ........+|+|+.||+-++.
T Consensus 512 v~~e~~~~------------~~~~Di~s~-mY~~---------~~----~i~~~~~~~-~~~~~~~~kP~i~~Ey~Hamg 564 (1032)
T 3oba_A 512 VHYEGDLN------------ALSADIFSF-MYPT---------FE----IMERWRKNH-TDENGKFEKPLILCEYGHAMG 564 (1032)
T ss_dssp EECTTCTT------------CTTCSSEEE-ESCC---------HH----HHHHHHHHH-BCTTSCBSSCEEEEEESCCCS
T ss_pred EEeccCcC------------cccceeeec-cCCC---------HH----HHHHHHhhC-cccccccCCCEEEEecccccc
Confidence 87654321 112234564 5542 11 121111000 000001257999999998876
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 453 VTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 453 ~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
......++|.+.++. +. ...|-|.|.|-.+
T Consensus 565 n~~g~l~~yw~~~~~----~p-~~~GgfiWdw~Dq 594 (1032)
T 3oba_A 565 NGPGSLKEYQELFYK----EK-FYQGGFIWEWANH 594 (1032)
T ss_dssp SCCCCHHHHHHHHHH----CT-TEEEEEESCSBCC
T ss_pred CCCCCHHHHHHHHHh----CC-CeeEEEEEecccc
Confidence 544555554433321 22 5679999988774
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=3.5e-08 Score=102.90 Aligned_cols=234 Identities=12% Similarity=0.155 Sum_probs=141.5
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE-c--CCC-CCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID-L--HAA-PGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-l--H~~-pGsqn~~~~sg~ 301 (532)
+++.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|... | |.. |+ |-...
T Consensus 51 ~~~~~l~-~~~fn~vt~eN~~kW-~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~vrgHtlvW~~q~P~----W~~~d- 119 (378)
T 1ur1_A 51 ERLNTLI-AKEFNSITPENCMKW-GVLRDAQG-QW---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIHD----EVFKN- 119 (378)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHBCTTC-CB---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSCG----GGTBC-
T ss_pred HHHHHHH-HccCCeEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEeecccccccCch----hhhcC-
Confidence 4566666 569999999 6776 45666654 44 4688999999999999998653 2 532 22 22110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC--cccH-----HHHHHHHHHHHHhhCCCcEEE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP--LDIL-----VPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~--~~~l-----~~~~~~~~~aIR~~~~~~~Vi 374 (532)
..| ..+..+...+++.++++.+++||++ .|..|++.|||.....+ ...| .+|++.++++.|+++|+..++
T Consensus 120 ~~g-~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~~dP~a~L~ 196 (378)
T 1ur1_A 120 ADG-SYISKAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLM 196 (378)
T ss_dssp TTS-CBCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEE
T ss_pred CCC-CCCCHHHHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHHhCCCCEEE
Confidence 001 1234467789999999999999998 67789999999864211 1112 368899999999999999999
Q ss_pred EeCCCC-CCCc-hh---hhh-cc-CC--CCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEe
Q 009560 375 VCQRIG-NADP-LE---LYQ-AN-IG--LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIG 445 (532)
Q Consensus 375 v~~~~~-~~~~-~~---~~~-~~-~~--~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vG 445 (532)
+.+..- .... .. +.. +. .+ -+-+-+..|.-.. ..+. ..+. +.+..++. .|.||.|+
T Consensus 197 ~Ndyn~~~~~k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~------~p~~----~~i~----~~l~~~a~-~Gl~i~iT 261 (378)
T 1ur1_A 197 YNDYNIERTGKREATVEMIERLQKRGMPIHGLGIQGHLGID------TPPI----AEIE----KSIIAFAK-LGLRVHFT 261 (378)
T ss_dssp EEESSTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEEESS------CSCH----HHHH----HHHHHHHT-TTCEEEEE
T ss_pred eccccccccchhHHHHHHHHHHHHCCCCcceEEecCcCCCC------CCCH----HHHH----HHHHHHHh-cCCeEEEE
Confidence 876321 1110 11 111 11 22 3444455565211 0111 2222 23334443 47899999
Q ss_pred ccCcccCCC------------------------CCC---HHHHHHHHHHHHHHHHhCC--Cc-EEEEcccCCCCCC
Q 009560 446 EWVNEWNVT------------------------SGT---QKDYQDFGSAQLEVYNAAS--FG-WAYWTLKNDRKHW 491 (532)
Q Consensus 446 EwG~~~~~~------------------------~a~---~~~~~~~~~~ql~~~~~~~--~G-w~yW~~k~e~~~W 491 (532)
|+....... +.+ .+...++++..+.++-+.. ++ -++|.+.. ...|
T Consensus 262 ElDi~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~git~WG~~D-~~sW 336 (378)
T 1ur1_A 262 SLDVDVLPSVWELPVAEVSTRFEYKPERDPYTKGLPQEMQDKLAKRYEDLFKLFIKHSDKIDRATFWGVSD-DASW 336 (378)
T ss_dssp EEEEECSCCCCC----CTTTTTSCCGGGCTTTTCCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBG-GGCG
T ss_pred ecccCCCCccccccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhccCceeEEEEECCcc-CCCc
Confidence 998753210 112 1233455666666665432 55 88998876 3445
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.92 E-value=9e-08 Score=99.81 Aligned_cols=236 Identities=16% Similarity=0.149 Sum_probs=138.4
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEc---CC-CCCCCCCCCCC--
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL---HA-APGSQNGMEHS-- 299 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~-~pGsqn~~~~s-- 299 (532)
+++.+.| +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|.... |. .|+ |-..
T Consensus 42 ~~~~~l~-~~~fn~vt~eNe~kW-~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~vrghtlvW~~q~P~----W~~~~~ 111 (379)
T 1r85_A 42 EKDVQML-KRHFNSIVAENVMKP-ISIQPEEG-KF---NFEQADRIVKFAKANGMDIRFHTLVWHSQVPQ----WFFLDK 111 (379)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEECSCCSTTCCG----GGGBCT
T ss_pred HHHHHHH-HhhCCeEEECCcccH-HHhcCCCC-cc---CchhHHHHHHHHHHCCCEEEEecccccccCch----hhhcCc
Confidence 4566666 669999999 4665 55666554 44 46899999999999999987643 32 121 1110
Q ss_pred -CCCCCCC------CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC--cccH-----HHHHHHHHHHHH
Q 009560 300 -ASRDGTT------DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP--LDIL-----VPYYKQGYQIVR 365 (532)
Q Consensus 300 -g~~~g~~------~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~--~~~l-----~~~~~~~~~aIR 365 (532)
|.+.... ....+..++++.++++.+++||++ .|..|++.|||.....+ ...| .+|+..++++.|
T Consensus 112 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar 189 (379)
T 1r85_A 112 EGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAAR 189 (379)
T ss_dssp TSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCccccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccCchHHHhhhHHHHHHHHHHHH
Confidence 1000000 111235677889999999999998 68889999999764211 1112 368899999999
Q ss_pred h-hCCCcEEEEeCCCCCCCc---hhhhhc----c-CCC--CcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH
Q 009560 366 K-YSPTAYVIVCQRIGNADP---LELYQA----N-IGL--HNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 366 ~-~~~~~~Viv~~~~~~~~~---~~~~~~----~-~~~--~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~ 434 (532)
+ .+|+..|++.+..- ..+ ..+... . .+. +-+-+..|.-.. + .+. ..+. +.+..+
T Consensus 190 ~~adP~a~L~~NDyn~-~~~~k~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~----~--p~~----~~~~----~~l~~~ 254 (379)
T 1r85_A 190 KYGGDNIKLYMNDYNT-EVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIG----W--PSE----AEIE----KTINMF 254 (379)
T ss_dssp HHHCTTSEEEEEESCT-TSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSS----S--SCH----HHHH----HHHHHH
T ss_pred hhCCCCCEEEeccccc-ccchhHHHHHHHHHHHHHCCCceeEEEEeEEecCC----C--CCH----HHHH----HHHHHH
Confidence 9 99999999875321 111 112111 1 222 334444465211 0 112 2222 223334
Q ss_pred HhcCCCcEEEeccCcccCCCC---------CC---HHHHHHHHHHHHHHHHhCC--Cc-EEEEcccCCCCCCc
Q 009560 435 NNANGPLVFIGEWVNEWNVTS---------GT---QKDYQDFGSAQLEVYNAAS--FG-WAYWTLKNDRKHWD 492 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~~---------a~---~~~~~~~~~~ql~~~~~~~--~G-w~yW~~k~e~~~Ws 492 (532)
+. .|.||.|+|+........ .+ .+....+++..+.++-+.. ++ -++|.+.. ...|-
T Consensus 255 a~-lGlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~git~WG~~D-~~sW~ 325 (379)
T 1r85_A 255 AA-LGLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIAD-NHTWL 325 (379)
T ss_dssp HH-TTCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST-TSCGG
T ss_pred Hh-cCCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCceeEEEEeCCcC-CCCcc
Confidence 43 478999999997632110 01 1223455566666665432 54 88999887 44563
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-08 Score=103.18 Aligned_cols=234 Identities=15% Similarity=0.175 Sum_probs=139.9
Q ss_pred HHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE-c--CC-CCCCCCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID-L--HA-APGSQNGMEHSASR 302 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD-l--H~-~pGsqn~~~~sg~~ 302 (532)
++.+.+ +.+||.|++ .+.| ...+|.++ .| .++.+|+++++|+++||+|... | |. .|+ |-... .
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW-~~~ep~~G-~~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~~-~ 101 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKP-VSLQPREG-EW---NWEGADKIVEFARKHNMELRFHTLVWHSQVPE----WFFID-E 101 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEECCSEESSSCCG----GGGBC-T
T ss_pred HHHHHH-HhcCCEEEECCcccH-HHhcCCCC-cc---CchHHHHHHHHHHHCCCEEEEeeccccccCch----hHhcC-C
Confidence 445555 689999999 7776 45566554 44 4688999999999999998653 2 32 122 11100 0
Q ss_pred CCCC----------CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC--cccH-----HHHHHHHHHHHH
Q 009560 303 DGTT----------DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP--LDIL-----VPYYKQGYQIVR 365 (532)
Q Consensus 303 ~g~~----------~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~--~~~l-----~~~~~~~~~aIR 365 (532)
.|.. ....+..++++.++++.+++||++ .|..|++.|||.....+ ...| .+|+..++++.|
T Consensus 102 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar 179 (356)
T 2uwf_A 102 NGNRMVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTDYIKVAFETAR 179 (356)
T ss_dssp TSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCcccchHHhhccHHHHHHHHHHHH
Confidence 0100 111235667888999999999997 68889999999764211 1111 368899999999
Q ss_pred h-hCCCcEEEEeCCCCCCCc---hh---hh----hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH
Q 009560 366 K-YSPTAYVIVCQRIGNADP---LE---LY----QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 366 ~-~~~~~~Viv~~~~~~~~~---~~---~~----~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~ 434 (532)
+ .+|+..|++.+.. -..+ .. +. ....+-+-+-+..|....+ .+. ..+. +.+..+
T Consensus 180 ~~~dP~a~L~~Ndyn-~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~~----~~~~----~~l~~~ 244 (356)
T 2uwf_A 180 KYGGEEAKLYINDYN-TEVPSKRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGW------PSI----EDTR----ASFEKF 244 (356)
T ss_dssp HHHCTTCCEEEEESC-TTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCH----HHHH----HHHHHH
T ss_pred hhCCCCCEEEecccc-ccccchhHHHHHHHHHHHHCCCcccEEEEEEecCCCC------CCH----HHHH----HHHHHH
Confidence 9 9999998887532 1121 11 21 1112234444555865321 112 2222 233344
Q ss_pred HhcCCCcEEEeccCcccCCCC----------CCH---HHHHHHHHHHHHHHHh---CCCcEEEEcccCCCCCCc
Q 009560 435 NNANGPLVFIGEWVNEWNVTS----------GTQ---KDYQDFGSAQLEVYNA---ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~~----------a~~---~~~~~~~~~ql~~~~~---~~~Gw~yW~~k~e~~~Ws 492 (532)
+ ..|.||.|+|+........ .+. +....+++..+.++-+ ...|-++|.+.. ...|-
T Consensus 245 a-~~Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~git~WG~~D-~~sW~ 316 (356)
T 2uwf_A 245 T-SLGLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATISSVTFWGIAD-NHTWL 316 (356)
T ss_dssp H-TTTCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST-TSCHH
T ss_pred H-hcCCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhccCCEEEEEEECCCC-CCccc
Confidence 4 3478999999997642110 111 2234455666666644 346999999987 44563
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.91 E-value=3.7e-08 Score=101.71 Aligned_cols=228 Identities=16% Similarity=0.195 Sum_probs=140.4
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEE---cCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID---LHAAPGSQNGMEHSASR 302 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILD---lH~~pGsqn~~~~sg~~ 302 (532)
+++.+.+ +.+||.|++ -+.| ...+|.++ | .++.+|+++++|+++||+|... .|. +. |
T Consensus 28 ~~~~~~~-~~~fn~vt~en~~kW-~~~ep~~G--~---~f~~~D~~v~~a~~~gi~v~ghtl~W~~-~~-q--------- 89 (348)
T 1w32_A 28 SARQNIV-RAEFNQITAENIMKM-SYMYSGSN--F---SFTNSDRLVSWAAQNGQTVHGHALVWHP-SY-Q--------- 89 (348)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSG-GGGEETTE--E---CCHHHHHHHHHHHHTTCEEEEEEEECCC-GG-G---------
T ss_pred HHHHHHH-HhhCCeEEECCccch-hhhccCCC--C---CchHHHHHHHHHHHCCCEEEEEeeecCc-cc-c---------
Confidence 3555555 678999999 5665 45566554 4 3788999999999999998753 232 00 1
Q ss_pred CCCCCCC---ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-----C-----C------cccH--HHHHHHHH
Q 009560 303 DGTTDWP---ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-----V-----P------LDIL--VPYYKQGY 361 (532)
Q Consensus 303 ~g~~~W~---~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-----~-----~------~~~l--~~~~~~~~ 361 (532)
.+.|. ++..+++..++++.+++||++ .|..|++.|||.... . . .+.+ .+|+..++
T Consensus 90 --~P~W~~~~~~~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~~aF 165 (348)
T 1w32_A 90 --LPNWASDSNANFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAF 165 (348)
T ss_dssp --CCTTCSTTCTTHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHH
T ss_pred --CchhhhcCCHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHHHHH
Confidence 12232 245889999999999999996 678899999997632 1 0 0122 46889999
Q ss_pred HHHHhhCCCcEEEEeCCCCCCCc---hhh---h----hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHH
Q 009560 362 QIVRKYSPTAYVIVCQRIGNADP---LEL---Y----QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQL 431 (532)
Q Consensus 362 ~aIR~~~~~~~Viv~~~~~~~~~---~~~---~----~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~ 431 (532)
++.|+++|+..|++.+..-..++ ..+ . ....+-+-+-+..|+...+ .+. ..++ +.+
T Consensus 166 ~~Ar~adP~a~L~~NDyn~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~------p~~----~~~~----~~l 231 (348)
T 1w32_A 166 RRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDY------PSI----ANIR----QAM 231 (348)
T ss_dssp HHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS------SCH----HHHH----HHH
T ss_pred HHHHHhCCCCEEEecccccccCCchHHHHHHHHHHHHHCCCcccEEEeccccCCCC------CCH----HHHH----HHH
Confidence 99999999999988753211121 112 1 1112234455555764311 011 2222 334
Q ss_pred HHHHh-cCCCcEEEeccCcccCCC------------C------CCHHHHHHHHHHHHHHHH--h---CCCcEEEEcccCC
Q 009560 432 QALNN-ANGPLVFIGEWVNEWNVT------------S------GTQKDYQDFGSAQLEVYN--A---ASFGWAYWTLKND 487 (532)
Q Consensus 432 ~~~~~-~~g~pv~vGEwG~~~~~~------------~------a~~~~~~~~~~~ql~~~~--~---~~~Gw~yW~~k~e 487 (532)
..++. ..|.||.|+|++...... . ...+....+++..+.++. + ...|-++|.+..
T Consensus 232 ~~~a~~~~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~~~~~~~~~~~v~git~WG~~D- 310 (348)
T 1w32_A 232 QKIVALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGRRGGITVWGIAD- 310 (348)
T ss_dssp HHHHTTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESCSBG-
T ss_pred HHHhcccCCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHHHHhccccCCceEEEEEECCcc-
Confidence 44541 457899999999764310 0 011223445566666665 2 344899999887
Q ss_pred CCCCc
Q 009560 488 RKHWD 492 (532)
Q Consensus 488 ~~~Ws 492 (532)
...|-
T Consensus 311 ~~sW~ 315 (348)
T 1w32_A 311 PDSWL 315 (348)
T ss_dssp GGSTT
T ss_pred CCccC
Confidence 34454
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=97.25 Aligned_cols=232 Identities=14% Similarity=0.244 Sum_probs=145.1
Q ss_pred HHHHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEE---EcCC-CCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCII---DLHA-APGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VIL---DlH~-~pGsqn~~~~sg~ 301 (532)
+.....+-..-||.+.. .+-| ...+|.++ .| .++..|+++++|+++||.|.- -.|. .|+ |-.
T Consensus 47 ~~~y~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrgHtLvWh~q~P~----W~~--- 114 (341)
T 3niy_A 47 EEKYMEVARREFNILTPENQMKW-DTIHPERD-RY---NFTPAEKHVEFAEENNMIVHGHTLVWHNQLPG----WIT--- 114 (341)
T ss_dssp HHHHHHHHHHHCSEEEESSTTSH-HHHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHH---
T ss_pred CHHHHHHHHHhCCEEEECcccch-HHhcCCCC-cc---ChHHHHHHHHHHHHCCCeEEeeeccccccCch----hhh---
Confidence 44555555567999999 7776 45566554 33 467899999999999999853 3353 121 111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--ccH-----HHHHHHHHHHHHhhCCCcEEE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--DIL-----VPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~~l-----~~~~~~~~~aIR~~~~~~~Vi 374 (532)
...|..++..+++.++++.+++||++ .|..|+++|||.....+. ..| .+|+..++++.|+++|+..++
T Consensus 115 ---~~~~~~~~~~~~~~~~i~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~ 189 (341)
T 3niy_A 115 ---GREWTKEELLNVLEDHIKTVVSHFKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILI 189 (341)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHTTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEE
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHcCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHCCCceEE
Confidence 12355578889999999999999997 477799999998642111 112 368899999999999999999
Q ss_pred EeCCCCCC-C--chh-------hhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEE
Q 009560 375 VCQRIGNA-D--PLE-------LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFI 444 (532)
Q Consensus 375 v~~~~~~~-~--~~~-------~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~v 444 (532)
+.+..-.. . ... +.....+-+-+-+..|.... . .+.+ .+. +.+..++. .|.||.|
T Consensus 190 ~NDyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~-~-----~~~~----~~~----~~l~~~a~-lGl~v~i 254 (341)
T 3niy_A 190 YNDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYR-G-----LNYD----SFR----RNLERFAK-LGLQIYI 254 (341)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT-C-----CCHH----HHH----HHHHHHHH-TTCEEEE
T ss_pred eeccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCC-C-----CCHH----HHH----HHHHHHHH-cCCeEEE
Confidence 97632111 1 111 11222345667778887432 1 1111 122 23344443 4789999
Q ss_pred eccCcccCCCCC---CHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 445 GEWVNEWNVTSG---TQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 445 GEwG~~~~~~~a---~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
+|+......+.. ..+...+++++.+.++-+ ...|-++|.+.. ...|-
T Consensus 255 TElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~git~Wg~~D-~~sW~ 306 (341)
T 3niy_A 255 TEMDVRIPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAIQFWGFTD-KYSWV 306 (341)
T ss_dssp EEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBT-TSCSH
T ss_pred EeccccCCCCCChhHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCcc-CCccC
Confidence 999976432211 112233455555555543 567999999987 44563
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=6.6e-09 Score=119.23 Aligned_cols=144 Identities=13% Similarity=0.020 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+.-+ ...+ + +++++.|.++||.|+.|++...+ ..
T Consensus 355 ~~~l~~~k~~g~N~iR~wgg--~~y~-----~---------~~~~d~cD~~GilV~~e~~~~~~--------------~~ 404 (848)
T 2je8_A 355 QTLFRDMKEANMNMVRIWGG--GTYE-----N---------NLFYDLADENGILVWQDFMFACT--------------PY 404 (848)
T ss_dssp HHHHHHHHHTTCCEEEECTT--SCCC-----C---------HHHHHHHHHHTCEEEEECSCBSS--------------CC
T ss_pred HHHHHHHHHcCCcEEEeCCC--ccCC-----C---------HHHHHHHHHcCCEEEECcccccC--------------CC
Confidence 57899999999999999210 1111 1 36889999999999999863210 00
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----C----CCc---cc-HH---H-HHHHHHHHHHhhCCCc
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----T----VPL---DI-LV---P-YYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----~----~~~---~~-l~---~-~~~~~~~aIR~~~~~~ 371 (532)
-.++...+.+.+.++.+.+|++++|+|++|.+.|||... + .+. +. +. . |.+.+.+.||+.||++
T Consensus 405 ~~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr 484 (848)
T 2je8_A 405 PSDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDR 484 (848)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 124677888999999999999999999999999999431 0 001 11 11 1 4566899999999999
Q ss_pred EEEEeCCCCCCCchhhhhccCCCCcEEEEeeecccCC
Q 009560 372 YVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFD 408 (532)
Q Consensus 372 ~Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~ 408 (532)
++..+...++ +... +....+-+.|+|..+.
T Consensus 485 ~v~~~S~~~g-~~~~------~~~~~~gd~hy~~~w~ 514 (848)
T 2je8_A 485 FYVHSSPYLA-NWGR------PESWGTGDSHNWGVWY 514 (848)
T ss_dssp EEESSBSSSC-CTTC------GGGTTBSCEECCTTTT
T ss_pred eEEecCCCCC-CCCC------CCCCCCCCccccCccc
Confidence 9877644321 1100 1112334689988653
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.1e-09 Score=118.66 Aligned_cols=143 Identities=18% Similarity=0.160 Sum_probs=108.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++++++||++|+|+||+.|. |...+|.++ .|+=+....|+++|+.|+++||+|||-.- |=.+.-|+.. +.+.
T Consensus 39 ~d~l~kmka~G~NtV~~yvf-W~~hEP~~G-~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G--Pyi~aE~~~G----G~P~ 110 (971)
T 1tg7_A 39 IDIFEKVKALGFNCVSFYVD-WALLEGNPG-HYSAEGIFDLQPFFDAAKEAGIYLLARPG--PYINAEVSGG----GFPG 110 (971)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEECC--SCCCTTBGGG----GCCG
T ss_pred HHHHHHHHHcCCCEEEEecc-HHHhCCCCC-eecccchHHHHHHHHHHHHcCCEEEEecC--CcccceecCC----Ccce
Confidence 89999999999999999999 467778765 66666667799999999999999999532 1111111111 1222
Q ss_pred C----------CChhhHHHHHHHHHHHHHHhCCCC-----cEEEEEeccCCCCCCCC--cccHHHHHHHHHHHHHhhCCC
Q 009560 308 W----------PASDYISQTLDVIDFLASRYAKHP-----ALLGIELLNEPSAATVP--LDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 308 W----------~~~~~~~~~~~~w~~la~ry~~~p-----~v~g~EL~NEP~~~~~~--~~~l~~~~~~~~~aIR~~~~~ 370 (532)
| .++.++++..++.+.|++++++++ .|+++++-||....... .+...+|++...+++|+.+++
T Consensus 111 WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~ 190 (971)
T 1tg7_A 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (971)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred eecccCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCC
Confidence 2 257889999999999999998766 89999999998542100 134789999999999999999
Q ss_pred cEEEEeCC
Q 009560 371 AYVIVCQR 378 (532)
Q Consensus 371 ~~Viv~~~ 378 (532)
.+++....
T Consensus 191 vPl~tn~~ 198 (971)
T 1tg7_A 191 VPFISNDA 198 (971)
T ss_dssp SCBBCCBS
T ss_pred eeEEEecC
Confidence 99887653
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.79 E-value=1e-07 Score=108.42 Aligned_cols=168 Identities=10% Similarity=-0.005 Sum_probs=108.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++|++.||++|+|+||+.- . ++ -+++++.|.++||.|+.++... |.......+
T Consensus 310 ~~dl~~~K~~G~N~iR~~h----~----p~----------~~~~~dlcDe~GilV~~E~~~~------w~~~~~~~~--- 362 (801)
T 3gm8_A 310 HYRLKLLKDMGCNAIRTSH----N----PF----------SPAFYNLCDTMGIMVLNEGLDG------WNQPKAADD--- 362 (801)
T ss_dssp HHHHHHHHHTTCCEEEETT----S----CC----------CHHHHHHHHHHTCEEEEECCSS------SSSCSSTTS---
T ss_pred HHHHHHHHHCCCcEEEecC----C----CC----------cHHHHHHHHHCCCEEEECCchh------hcCCCCccc---
Confidence 6899999999999999942 1 11 1478899999999999996431 111111100
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCC-chh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNAD-PLE 386 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~-~~~ 386 (532)
.++...+...+..+.+.+|++++|+|++|.+.||+.+. + .++++++++.+|+.||++++..+....... ...
T Consensus 363 -~~~~~~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~~g~--~----~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~~~~ 435 (801)
T 3gm8_A 363 -YGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTGA--T----PEIQHNLVSLFHQLDPDRPVTQGGTDPTRGMKTD 435 (801)
T ss_dssp -GGGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSSC--C----HHHHHHHHHHHHHHCTTSCEEEETCCC-------
T ss_pred -ccHHHHHHHHHHHHHHHHhcCCCCeEEEEECccCCCCc--H----HHHHHHHHHHHHHHCCCCCEEEcccccccccccc
Confidence 11344555667888999999999999999999999431 1 578899999999999999998764321110 011
Q ss_pred hhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcc
Q 009560 387 LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNE 450 (532)
Q Consensus 387 ~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~ 450 (532)
+... ...-.|+++++|..+- . . ++ . ..++....|+++.|||..
T Consensus 436 ~~~~--~~~~Dv~g~ny~~~~y---~-----~-~~-------~---~~~~~p~kpi~~sE~~~~ 478 (801)
T 3gm8_A 436 YQKK--FNYLDIIGFNGNGEEI---G-----E-LE-------H---FHKNYPTLCAIATEVPHT 478 (801)
T ss_dssp -------CCCSEEEECGGGGST---T-----H-HH-------H---HHHHCTTSEEEESSCCBB
T ss_pred hhhc--ccccCEEEeccchhhh---h-----h-hH-------H---HHHhCCCCcEEEEeCCCc
Confidence 1110 0013577888875421 1 0 01 0 112345679999999975
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8.1e-08 Score=105.31 Aligned_cols=140 Identities=14% Similarity=0.193 Sum_probs=101.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++++++||++|+|+||+.|.| ...+|.++ .|+=+....|+++++.|+++||+|||..--+ .+--|+. | |.+.
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~G-~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPy--i~aEw~~-G---G~P~ 114 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPW-NFHEPWPG-QYQFSEDHDVEYFLRLAHELGLLVILRPGPY--ICAEWEM-G---GLPA 114 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCH-HHHCSBTT-BCCCSGGGCHHHHHHHHHHTTCEEEEECCSC--CCTTBGG-G---GCCG
T ss_pred HHHHHHHHHcCCCEEEEEech-hhcCCCCC-ccCccchHHHHHHHHHHHHcCCEEEeccCCc--cccccCC-C---cCCh
Confidence 899999999999999998887 55677654 6665566679999999999999999963111 0101111 1 1222
Q ss_pred CC-----------ChhhHHHHHHHHHHHHHH-----hCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhh-CCC
Q 009560 308 WP-----------ASDYISQTLDVIDFLASR-----YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKY-SPT 370 (532)
Q Consensus 308 W~-----------~~~~~~~~~~~w~~la~r-----y~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~-~~~ 370 (532)
|. ++.++++..++.+.|+++ |++.+.|+++++=||-..... .-++|++.+.+..|+. +-+
T Consensus 115 WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~---~d~~Ym~~l~~~~~~~~Gi~ 191 (654)
T 3thd_A 115 WLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFA---CDFDYLRFLQKRFRHHLGDD 191 (654)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSC---CCHHHHHHHHHHHHHHHCSS
T ss_pred HHhcCCCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccc---ccHHHHHHHHHHHHHhcCCc
Confidence 32 468889999999999999 888899999999999854221 1256777777778886 666
Q ss_pred cEEEEeCC
Q 009560 371 AYVIVCQR 378 (532)
Q Consensus 371 ~~Viv~~~ 378 (532)
.+++.+++
T Consensus 192 v~l~t~D~ 199 (654)
T 3thd_A 192 VVLFTTDG 199 (654)
T ss_dssp SEEEEEEE
T ss_pred eeeEeecC
Confidence 66665543
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=5.1e-07 Score=92.35 Aligned_cols=233 Identities=16% Similarity=0.157 Sum_probs=141.4
Q ss_pred HHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCC-CCCCCCCCCCCC
Q 009560 232 NFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNG-MEHSASRDGTTD 307 (532)
Q Consensus 232 ~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~-~~~sg~~~g~~~ 307 (532)
..+....||.+.. .+.| ...+|.++ .| .++..|+++++|+++||.|.. |.. ..+|.. |-... ..| ..
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrg--HtLvWh~q~P~W~~~~-~~g-~~ 100 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKF-EEVHPREH-EY---TFEAADEIVDFAVARGIGVRG--HTLVWHNQTPAWMFED-ASG-GT 100 (331)
T ss_dssp HHHHHHHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEE--CCSBCSSSCCGGGGBC-TTS-SB
T ss_pred HHHHHHhCCEEEECcccch-hhhcCCCC-cc---ChhHHHHHHHHHHHCCCEEee--eeeeccccCcHhHhcc-ccC-CC
Confidence 3444567999998 7765 45666654 44 467899999999999999854 321 112211 11100 000 12
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC----cccH-----HHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP----LDIL-----VPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~----~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
+..++..+++.++++.+++||++ .|..||++|||.....+ ...| .+|+..+.++.|+++|+..+++.+.
T Consensus 101 ~~~~~l~~~~~~~I~~v~~rYkg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar~adP~a~L~~NDy 178 (331)
T 3emz_A 101 ASREMMLSRLKQHIDTVVGRYKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAHEADPNALLFYNDY 178 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHHhhCCCceEEeccc
Confidence 33346788899999999999997 57789999999764211 1111 3588899999999999999999763
Q ss_pred CCCCCc----------hhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccC
Q 009560 379 IGNADP----------LELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWV 448 (532)
Q Consensus 379 ~~~~~~----------~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG 448 (532)
.- ..+ +.+.....+-+-+-+..|....+ .+. ..+. +.+..++. .|.||.|+|+.
T Consensus 179 n~-~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~------p~~----~~~~----~~l~~~a~-lGl~v~iTElD 242 (331)
T 3emz_A 179 NE-TDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHG------PSM----DEIR----QAIERYAS-LDVQLHVTELD 242 (331)
T ss_dssp SC-SSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTB------SCH----HHHH----HHHHHHHT-TSCEEEEEEEE
T ss_pred cc-cChHHHHHHHHHHHHHHHCCCccceEEECceecCCC------CCH----HHHH----HHHHHHHH-cCCcEEEeecc
Confidence 21 122 11111123456777888864210 011 2222 23444443 47899999998
Q ss_pred cccCC--------CCCCH---HHHHHHHHHHHHHHHh---CCCcEEEEcccCCCCCCc
Q 009560 449 NEWNV--------TSGTQ---KDYQDFGSAQLEVYNA---ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 449 ~~~~~--------~~a~~---~~~~~~~~~ql~~~~~---~~~Gw~yW~~k~e~~~Ws 492 (532)
..... ...+. .....++++.+.++-+ ...|-++|.+.. ...|-
T Consensus 243 i~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D-~~sW~ 299 (331)
T 3emz_A 243 LSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVAD-NYTWL 299 (331)
T ss_dssp EESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSST-TCCGG
T ss_pred cCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCC-CCccC
Confidence 76321 11222 1233455666666644 345999999987 44553
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.9e-07 Score=91.26 Aligned_cols=237 Identities=14% Similarity=0.142 Sum_probs=142.4
Q ss_pred HHHHHH--HcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCC-CCCCCC
Q 009560 230 DFNFLY--RHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCII---DLHAAPGSQNG-MEHSAS 301 (532)
Q Consensus 230 d~~~la--~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VIL---DlH~~pGsqn~-~~~sg~ 301 (532)
....+- ..-||.|-. .+-| ...+|.++ .| .++..|+++++|+++||.|.- -.|. |.+ |-.
T Consensus 28 ~~~~~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~---~f~~~D~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~--- 95 (327)
T 3u7b_A 28 GEIDIINNKNEIGSITPENAMKW-EAIQPNRG-QF---NWGPADQHAAAATSRGYELRCHTLVWHS----QLPSWVA--- 95 (327)
T ss_dssp HHHHHHTCTTTCCEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEEEEEEST----TCCHHHH---
T ss_pred HHHHHHHhHhhCCeEEECccccH-HHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeeeecCC----cCcHHHh---
Confidence 344444 456888875 3444 45666654 44 467899999999999999863 2342 211 111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--ccH-----HHHHHHHHHHHHhhCCCcEEE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--DIL-----VPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~~l-----~~~~~~~~~aIR~~~~~~~Vi 374 (532)
...|..++..+++.++++.+++||++ .|..||++|||.....+. ..+ .+|+..++++.|+++|+..++
T Consensus 96 ---~~~~~~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~ 170 (327)
T 3u7b_A 96 ---NGNWNNQTLQAVMRDHINAVMGRYRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLY 170 (327)
T ss_dssp ---TCCCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEE
Confidence 11244467788999999999999997 477899999997642111 112 268899999999999999999
Q ss_pred EeCCCCCCC-c--hh---h----hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEE
Q 009560 375 VCQRIGNAD-P--LE---L----YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFI 444 (532)
Q Consensus 375 v~~~~~~~~-~--~~---~----~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~v 444 (532)
+.+..-... . .. + .....+-+-+-+..|.....+....+..+ .+..+. +.+..++ ..|.||.|
T Consensus 171 ~Ndyn~e~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p--~~~~~~----~~l~~~a-~lGl~v~i 243 (327)
T 3u7b_A 171 YNDYNLEYGNAKTEGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTP--SRAKLA----SVLQGLA-DLGVDVAY 243 (327)
T ss_dssp EEESSCTTCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCC--CHHHHH----HHHHHHH-TTTCEEEE
T ss_pred eccccccCCchhhHHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCC--CHHHHH----HHHHHHH-hcCCceEE
Confidence 976321111 1 11 1 11123456777888987521211111111 122232 2334444 35889999
Q ss_pred eccCcccCCCCCCH---HHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 445 GEWVNEWNVTSGTQ---KDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 445 GEwG~~~~~~~a~~---~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
+|+...... ..+. +...++++..+.++-+ ...|-++|.+.. ...|-
T Consensus 244 TElDv~~~~-p~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt~WG~~D-~~sW~ 294 (327)
T 3u7b_A 244 TELDIRMNT-PATQQKLQTNADAYARIVGSCMDVKRCVGITVWGISD-KYSWV 294 (327)
T ss_dssp EEEEEEEES-SCCHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBG-GGCSH
T ss_pred EecccccCC-CCCHHHHHHHHHHHHHHHHHHHhCCCceEEEEEccCc-CCccc
Confidence 999986532 1222 2233445555555533 566999999887 44563
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.57 E-value=2.2e-07 Score=101.02 Aligned_cols=139 Identities=19% Similarity=0.191 Sum_probs=100.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++++++||++|+|+||+.|.| ...+|.++ .|+=+....|+++++.|+++||+|||-.--+ .+.-|+.. +.+.
T Consensus 35 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~G-~fdF~g~~dL~~fl~~a~~~Gl~VilrpGPY--i~aEw~~G----G~P~ 106 (595)
T 4e8d_A 35 YHSLYNLKALGFNTVETYVAW-NLHEPCEG-EFHFEGDLDLEKFLQIAQDLGLYAIVRPSPF--ICAEWEFG----GLPA 106 (595)
T ss_dssp HHHHHHHHHTTCCEEEEECCH-HHHCSBTT-BCCCSGGGCHHHHHHHHHHTTCEEEEECCSC--CCTTBGGG----GCCG
T ss_pred HHHHHHHHHcCCCEEEEeccH-HHcCCCCC-eecccchhhHHHHHHHHHHcCCEEEEecCCc--eecccCCC----cCCh
Confidence 799999999999999999995 66677664 6665566679999999999999999962111 00111111 1223
Q ss_pred CC----------ChhhHHHHHHHHHHHHHHhC-----CCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 308 WP----------ASDYISQTLDVIDFLASRYA-----KHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 308 W~----------~~~~~~~~~~~w~~la~ry~-----~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
|. ++...++..++++.|+++.+ +...|+++++=||..... .-++|.+.+.+..|+.+-+.+
T Consensus 107 WL~~~p~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~----~~~~Y~~~l~~~~~~~Gi~vp 182 (595)
T 4e8d_A 107 WLLTKNMRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYG----EDKAYLRAIRQLMEECGVTCP 182 (595)
T ss_dssp GGGGSSSCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTC----CCHHHHHHHHHHHHHTTCCSC
T ss_pred hhccCCceeccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccC----CcHHHHHHHHHHHHHcCCcEE
Confidence 32 46778888888887777654 346799999999986432 235677777788888888888
Q ss_pred EEEeCC
Q 009560 373 VIVCQR 378 (532)
Q Consensus 373 Viv~~~ 378 (532)
++.+++
T Consensus 183 l~t~d~ 188 (595)
T 4e8d_A 183 LFTSDG 188 (595)
T ss_dssp EEEEEC
T ss_pred EEEccC
Confidence 888764
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.3e-06 Score=94.38 Aligned_cols=160 Identities=13% Similarity=0.143 Sum_probs=100.7
Q ss_pred HHHHHHHHHcCCCEEEEc-------cccccccCCCC--CCC------CCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIP-------VGWWIAFDPDP--PAP------FIGGSLEALDNALSWAEAYNIKCIIDLHAAPGS 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-------v~ww~~~~~~~--~~~------~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGs 292 (532)
++-++.++++|+..||+| ..|-....|.. +.. +.+...--+|+++++|++.|+.+++.+-..+|
T Consensus 54 ~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~~- 132 (502)
T 1qw9_A 54 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTR- 132 (502)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSC-
T ss_pred HHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCCC-
Confidence 677888999999999998 33322222211 111 11111123699999999999999999865221
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHH--------HHHHHHHhCC-CC-cEEEEEeccCCCCC----CCCcccHHHHHH
Q 009560 293 QNGMEHSASRDGTTDWPASDYISQTLDV--------IDFLASRYAK-HP-ALLGIELLNEPSAA----TVPLDILVPYYK 358 (532)
Q Consensus 293 qn~~~~sg~~~g~~~W~~~~~~~~~~~~--------w~~la~ry~~-~p-~v~g~EL~NEP~~~----~~~~~~l~~~~~ 358 (532)
.++....++++ |..+..+++. .| .+..|||.|||.+. ..+.+.+.+.+.
T Consensus 133 -----------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~ 195 (502)
T 1qw9_A 133 -----------------GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIAC 195 (502)
T ss_dssp -----------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHH
Confidence 12333333333 4456667754 34 67789999999853 235677899999
Q ss_pred HHHHHHHhhCCCcEEEEeCCCCCC-----Cc-hhhhhccCCCCcEEEEeeeccc
Q 009560 359 QGYQIVRKYSPTAYVIVCQRIGNA-----DP-LELYQANIGLHNIVVDLHYYNL 406 (532)
Q Consensus 359 ~~~~aIR~~~~~~~Viv~~~~~~~-----~~-~~~~~~~~~~~nvv~s~H~Y~~ 406 (532)
+..++||+++|+..|+.++..... ++ ..+++. ....-..+++|+|..
T Consensus 196 ~~a~aik~~dP~i~via~G~~~~~~p~~~~W~~~~l~~-~~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 196 EAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDH-TYDHVDYISLHQYYG 248 (502)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEeCCCcccCcccCchHHHHHHh-cccCCCEEEEeeCCC
Confidence 999999999999877654322111 11 122222 223456799999964
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.8e-08 Score=105.08 Aligned_cols=113 Identities=18% Similarity=0.270 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC---------CCCC--CCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA---------APGS--QNGM 296 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~---------~pGs--qn~~ 296 (532)
+++++.||++|+|+||++|.| ...+|.++ .|+ ++.||++++.|+++||+|||-+++ .|.. .+.-
T Consensus 76 ~~~W~~mKa~G~NtVr~~V~W-~~hEP~~G-~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~ 150 (552)
T 3u7v_A 76 AKVWPAIEKVGANTVQVPIAW-EQIEPVEG-QFD---FSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDK 150 (552)
T ss_dssp HHHHHHHHHHTCSEEEEEEEH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTT
T ss_pred HHHHHHHHHhCCCEEEEEehh-hccCCCCC-ccC---hhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcc
Confidence 566779999999999999965 56677654 554 566999999999999999997332 1110 0000
Q ss_pred ------CCCCCCCCCCCCCChhh----HHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 297 ------EHSASRDGTTDWPASDY----ISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 297 ------~~sg~~~g~~~W~~~~~----~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+..|.+.......++.+ ++.+.++.+.|++||+++|.|++|++-||+..
T Consensus 151 ~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 151 RFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred cCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 00000000011122333 66677888889999999999999999999965
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.8e-07 Score=106.35 Aligned_cols=144 Identities=22% Similarity=0.232 Sum_probs=104.7
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++++++||++|+|+|++.|.| ...+|.++ .|+=+....|+++|+.|+++||+|||-.--+ .+--++. | |.+.
T Consensus 59 ~d~l~kmKa~GlNtV~tYV~W-n~hEP~eG-~fdFsg~~dL~~fl~la~e~GL~VILRpGPY--i~aEw~~-G---G~P~ 130 (1003)
T 3og2_A 59 LDVFHKIKALGFNTVSFYVDW-ALLEGKPG-RFRADGIFSLEPFFEAATKAGIYLLARPGPY--INAEVSG-G---GFPG 130 (1003)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEEEESC--CCTTBGG-G---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hhcCCCCC-EecccchhhHHHHHHHHHHcCCEEEecCCcc--eeeecCC-C---Cccc
Confidence 899999999999999999995 66677664 6665556679999999999999999953111 0000111 1 1122
Q ss_pred C----------CChhhHHHHHHHHHHHHHHhCCC-----CcEEEEEeccCCCCCCCC-cccHHHHHHHHHHHHHhhCCCc
Q 009560 308 W----------PASDYISQTLDVIDFLASRYAKH-----PALLGIELLNEPSAATVP-LDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W----------~~~~~~~~~~~~w~~la~ry~~~-----p~v~g~EL~NEP~~~~~~-~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
| .++.++++..++.+.|+++++.+ +.|+++++=||....... ...-.+|++.+.++.|+.+-..
T Consensus 131 WL~~~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~V 210 (1003)
T 3og2_A 131 WLQRVKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIV 210 (1003)
T ss_dssp GGGGCCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCS
T ss_pred hhccCCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCce
Confidence 2 25788999999999999998754 589999999998642110 0113678888889999999888
Q ss_pred EEEEeCCC
Q 009560 372 YVIVCQRI 379 (532)
Q Consensus 372 ~Viv~~~~ 379 (532)
+++.++.+
T Consensus 211 Pl~t~d~~ 218 (1003)
T 3og2_A 211 PLINNDAF 218 (1003)
T ss_dssp CBBCCBSS
T ss_pred EEEEcCCc
Confidence 88877654
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.3e-06 Score=92.76 Aligned_cols=161 Identities=11% Similarity=0.118 Sum_probs=100.1
Q ss_pred CHHHHHHHHHcCCCEEEEcc-------ccccccCCCC--CCC------CCcChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPV-------GWWIAFDPDP--PAP------FIGGSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv-------~ww~~~~~~~--~~~------~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
.++-++.++++|+..||+|= .|-....|.. +.. +.+...--+|+++++|++.|+.+++.+-...|
T Consensus 61 R~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~~ 140 (513)
T 2c7f_A 61 RKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTR 140 (513)
T ss_dssp BHHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSSC
T ss_pred HHHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 36778899999999999981 2221122210 101 11111124599999999999999998864211
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHHHHH--------HHHHHHHhCCC-C-cEEEEEeccCCCCC----CCCcccHHHHH
Q 009560 292 SQNGMEHSASRDGTTDWPASDYISQTLDV--------IDFLASRYAKH-P-ALLGIELLNEPSAA----TVPLDILVPYY 357 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~~~~~~~~~~--------w~~la~ry~~~-p-~v~g~EL~NEP~~~----~~~~~~l~~~~ 357 (532)
.++....++++ |..+..+++.. | .|--|||.|||.+. ..+.+.+.+.+
T Consensus 141 ------------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~ 202 (513)
T 2c7f_A 141 ------------------GISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIA 202 (513)
T ss_dssp ------------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHH
T ss_pred ------------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHH
Confidence 12333333333 44556677542 3 46679999999853 23567889999
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCCCC-----Cc-hhhhhccCCCCcEEEEeeeccc
Q 009560 358 KQGYQIVRKYSPTAYVIVCQRIGNA-----DP-LELYQANIGLHNIVVDLHYYNL 406 (532)
Q Consensus 358 ~~~~~aIR~~~~~~~Viv~~~~~~~-----~~-~~~~~~~~~~~nvv~s~H~Y~~ 406 (532)
.+..++||+++|+..|+.++..... ++ ..++.. ....-..+++|+|..
T Consensus 203 ~~~a~a~k~~dP~i~via~G~~~~~~~~~~~W~~~~l~~-~~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 203 EETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDY-AYDYVDYISLHQYYG 256 (513)
T ss_dssp HHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HTTTCCEEEEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEEeCCCCCCCcccCchHHHHHHh-cccCCCEEEEeecCC
Confidence 9999999999999877654322111 11 122222 234557899999964
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.48 E-value=2.7e-06 Score=93.14 Aligned_cols=160 Identities=11% Similarity=0.134 Sum_probs=100.0
Q ss_pred HHHHHHHHHcCCCEEEEc-------cccccccCCCCCCCCC-cChHH-------HHHHHHHHHHHcCCEEEEEcCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIP-------VGWWIAFDPDPPAPFI-GGSLE-------ALDNALSWAEAYNIKCIIDLHAAPGS 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-------v~ww~~~~~~~~~~~~-~~~l~-------~Ld~~v~~a~k~Gi~VILDlH~~pGs 292 (532)
++-++.++++|+..||+| ..|-....|....|-. ...|. -+|+++++|++.|+.+++.+-..+|
T Consensus 94 ~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~~- 172 (574)
T 2y2w_A 94 QDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGTR- 172 (574)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSSC-
T ss_pred HHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCCC-
Confidence 678888999999999998 3342222221100100 00121 2799999999999999999865221
Q ss_pred CCCCCCCCCCCCCCCCCChhhHHHHHHH--------HHHHHHHhCC-CC-cEEEEEeccCCCCC----CCCcccHHHHHH
Q 009560 293 QNGMEHSASRDGTTDWPASDYISQTLDV--------IDFLASRYAK-HP-ALLGIELLNEPSAA----TVPLDILVPYYK 358 (532)
Q Consensus 293 qn~~~~sg~~~g~~~W~~~~~~~~~~~~--------w~~la~ry~~-~p-~v~g~EL~NEP~~~----~~~~~~l~~~~~ 358 (532)
..+....++++ |..+..+++. .| .|.-|||.||+.+. ..+.+.+.+.+.
T Consensus 173 -----------------~~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~ 235 (574)
T 2y2w_A 173 -----------------GLKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVD 235 (574)
T ss_dssp -----------------CHHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHH
Confidence 12333333333 4445556653 34 57789999999753 235678999999
Q ss_pred HHHHHHHhhCCCcEEEEeCCCCCC--C---c-hhhhhccCCCCcEEEEeeeccc
Q 009560 359 QGYQIVRKYSPTAYVIVCQRIGNA--D---P-LELYQANIGLHNIVVDLHYYNL 406 (532)
Q Consensus 359 ~~~~aIR~~~~~~~Viv~~~~~~~--~---~-~~~~~~~~~~~nvv~s~H~Y~~ 406 (532)
+.+++||+++|+..|+.++..... . + ..++.. ....-..+++|+|..
T Consensus 236 ~~a~AiK~vdP~i~via~G~~~~~~p~~~~W~~~~l~~-~~~~vD~vs~H~Y~~ 288 (574)
T 2y2w_A 236 KVAHAMKLAESGLELVACGSSGAYMPTFGTWEKTVLTK-AYENLDFVSCHAYYF 288 (574)
T ss_dssp HHHHHHHHHCTTCEEEEECCSCTTSTTTTHHHHHHHHH-HGGGCCEEEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEecCCcccCccccchHHHHHHh-cccCCCEEEEeecCC
Confidence 999999999999877765432111 1 1 122222 223456899999964
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-05 Score=82.29 Aligned_cols=230 Identities=11% Similarity=0.128 Sum_probs=139.2
Q ss_pred HHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCC-CCCCCCCCC
Q 009560 231 FNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI---IDLHAAPGSQNG-MEHSASRDG 304 (532)
Q Consensus 231 ~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VI---LDlH~~pGsqn~-~~~sg~~~g 304 (532)
...+-..-||.+.. .+-| ...+|.++ .| .++..|+++++|+++||.|. |-.|. |.+ |-..
T Consensus 33 y~~~~~~~Fn~~t~eN~mKW-~~~ep~~G-~~---~f~~aD~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~----- 98 (335)
T 4f8x_A 33 YLKVLKQNFGEITPANAMKF-MYTETEQN-VF---NFTEGEQFLEVAERFGSKVRCHNLVWAS----QVSDFVTS----- 98 (335)
T ss_dssp HHHHHHHHCSEEEESSTTSG-GGTEEETT-EE---CCHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHHT-----
T ss_pred HHHHHHHhCCEEEECCccch-HHhCCCCC-cc---CcchhHHHHHHHHHCCCEEEEeeecccc----cCcHHHhc-----
Confidence 33333336999998 7776 45565543 33 46789999999999999974 22342 211 1111
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--ccH-----HHHHHHHHHHHHhh-----CCCcE
Q 009560 305 TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--DIL-----VPYYKQGYQIVRKY-----SPTAY 372 (532)
Q Consensus 305 ~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~~l-----~~~~~~~~~aIR~~-----~~~~~ 372 (532)
..|..++..+++.++++.+++||++ .+..||++|||.....+. ..| .+|+..++++.|++ +|+..
T Consensus 99 -~~~~~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~ 175 (335)
T 4f8x_A 99 -KTWTAKELTAVMKNHIFKTVQHFGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVK 175 (335)
T ss_dssp -SCCCHHHHHHHHHHHHHHHHHHHGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSE
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcE
Confidence 1244467788999999999999997 577899999998642111 111 26788899999999 99999
Q ss_pred EEEeCCCCC-CCc--hh-------hhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcE
Q 009560 373 VIVCQRIGN-ADP--LE-------LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLV 442 (532)
Q Consensus 373 Viv~~~~~~-~~~--~~-------~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv 442 (532)
+++.+..-. ... .. +.....+-+-+-+..|...... .+. ..+. +.+..++. .|.||
T Consensus 176 L~~NDYn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~-----p~~----~~~~----~~l~~~a~-lGl~v 241 (335)
T 4f8x_A 176 LYYNDYGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGET-----PSL----ADQL----ATKQAYIK-ANLDV 241 (335)
T ss_dssp EEEEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC-----CCH----HHHH----HHHHHHHH-TTCEE
T ss_pred EEEecccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCC-----CCH----HHHH----HHHHHHHH-cCCee
Confidence 999763211 111 11 1122234567788888754211 111 1222 22333443 37899
Q ss_pred EEeccCcccCCCCC-CHH---HHHHHHHHHHHHHHh---CCCcEEEEcccCCCCCCc
Q 009560 443 FIGEWVNEWNVTSG-TQK---DYQDFGSAQLEVYNA---ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 443 ~vGEwG~~~~~~~a-~~~---~~~~~~~~ql~~~~~---~~~Gw~yW~~k~e~~~Ws 492 (532)
.|+|+-........ +.+ ...+++++.+.++-+ ...|-++|.+.. ...|-
T Consensus 242 ~iTElDi~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~~~v~git~WG~~D-~~sW~ 297 (335)
T 4f8x_A 242 AVTELDVRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDD-AYSWV 297 (335)
T ss_dssp EEEEEEEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBG-GGCSH
T ss_pred EEeeccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCcCCeeEEEEEcCcc-CCccC
Confidence 99999886431111 221 223344444444433 456999999987 44563
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.27 E-value=3.7e-05 Score=81.70 Aligned_cols=130 Identities=12% Similarity=0.074 Sum_probs=92.7
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccccCCC--CCC----CCCc----ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIAFDPD--PPA----PFIG----GSLEALDNALSWAEAYNIKCIIDLHAAPGSQ 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~~~~~--~~~----~~~~----~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq 293 (532)
+.-++..|+.|||+||+-+- =+...... +.. .+++ .+++.+|++|+.|.++||.+-|=+- .|..
T Consensus 55 ~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~--Wg~~ 132 (463)
T 3kzs_A 55 EYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCI--WGSP 132 (463)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESS--CHHH
T ss_pred HHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEE--eCCc
Confidence 56788899999999999872 11111110 000 1222 7999999999999999999888443 1210
Q ss_pred CCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEE
Q 009560 294 NGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 294 n~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~V 373 (532)
...+ + -..+....+++.|++||++.++|+ |-|-||=... .-.+..+++.+.||+.+|++++
T Consensus 133 ---v~~~-------~---m~~e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-----~~~~~w~~~~~~i~~~dp~~L~ 193 (463)
T 3kzs_A 133 ---VSHG-------E---MNVDQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-----VKTAEWEALATSIKAIDKNHLM 193 (463)
T ss_dssp ---HHTT-------S---CCHHHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-----SSHHHHHHHHHHHHHHCCSSCE
T ss_pred ---cccC-------C---CCHHHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-----cCHHHHHHHHHHHHhcCCCCcE
Confidence 0000 1 236678899999999999999998 9999997643 2345667788999999999999
Q ss_pred EEeCC
Q 009560 374 IVCQR 378 (532)
Q Consensus 374 iv~~~ 378 (532)
.+++.
T Consensus 194 T~H~~ 198 (463)
T 3kzs_A 194 TFHPR 198 (463)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99974
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.1e-05 Score=84.37 Aligned_cols=243 Identities=14% Similarity=0.092 Sum_probs=134.3
Q ss_pred HHHHHHcCCCEEEE--ccccccccCCCCCC-CCC-cChHHHHHHHHHHHHHcCCEEE---EEcCC-CCCCCCCCCCCCCC
Q 009560 231 FNFLYRHGINTVRI--PVGWWIAFDPDPPA-PFI-GGSLEALDNALSWAEAYNIKCI---IDLHA-APGSQNGMEHSASR 302 (532)
Q Consensus 231 ~~~la~~G~N~VRI--pv~ww~~~~~~~~~-~~~-~~~l~~Ld~~v~~a~k~Gi~VI---LDlH~-~pGsqn~~~~sg~~ 302 (532)
...+-..-||.|.. -+-| ...+|.++. .+. .-.+...|+++++|+++||+|. |-.|. .|+ |-.....
T Consensus 208 ~~~~~~~~Fn~it~eN~mKw-~~~e~~~g~~~~~~~~~f~~aD~~v~~A~~ngi~vrGHtLvWhsq~P~----W~~~~~~ 282 (540)
T 2w5f_A 208 IKALILREFNSITCENEMKP-DATLVQSGSTNTNIRVSLNRAASILNFCAQNNIAVRGHTLVWHSQTPQ----WFFKDNF 282 (540)
T ss_dssp HHHHHHHHCSEEEESSTTSH-HHHEEEEEEETTEEEECCTTTHHHHHHHHHTTCEEEEEEEECSSSCCG----GGGBTTS
T ss_pred HHHHHHHhCCeecccccccc-cccccCCCCccccceechhHHHHHHHHHHHCCCEEEEEEEEcCCCCch----HHhccCc
Confidence 33343457999976 2444 233333221 100 0135678999999999999974 33443 222 2111100
Q ss_pred CCCCCCCCh-hhHHHHHHHHHHHHHHhCCC-C--cEEEEEeccCCCCCC-------CC---------cccHH------HH
Q 009560 303 DGTTDWPAS-DYISQTLDVIDFLASRYAKH-P--ALLGIELLNEPSAAT-------VP---------LDILV------PY 356 (532)
Q Consensus 303 ~g~~~W~~~-~~~~~~~~~w~~la~ry~~~-p--~v~g~EL~NEP~~~~-------~~---------~~~l~------~~ 356 (532)
+....+.++ ...++..++++.++.||+++ | .|..||++|||.... .. ...|. +|
T Consensus 283 ~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~~~~ 362 (540)
T 2w5f_A 283 QDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGDNKF 362 (540)
T ss_dssp STTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSSTTH
T ss_pred ccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCcHHH
Confidence 111223333 45788889999999999874 4 399999999998643 00 12232 68
Q ss_pred HHHHHHHHHhhCCC-cEEEEeCCCCCCCc---hh---hhh-cc-CC-CCcEEEEeeecccCCCccccCChhhhHHHHHHH
Q 009560 357 YKQGYQIVRKYSPT-AYVIVCQRIGNADP---LE---LYQ-AN-IG-LHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKS 426 (532)
Q Consensus 357 ~~~~~~aIR~~~~~-~~Viv~~~~~~~~~---~~---~~~-~~-~~-~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~ 426 (532)
+..+.+..|+++|+ ..+++.+.. ...+ .. +.. +. .+ -+-+-+..|...... .+ .+ +..++.
T Consensus 363 i~~aF~~Ar~~dP~~a~L~~NDyn-~~~~~k~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~-~~--~~----~~~~~~- 433 (540)
T 2w5f_A 363 IEKAFTYARKYAPANCKLYYNDYN-EYWDHKRDCIASICANLYNKGLLDGVGMQSHINADMN-GF--SG----IQNYKA- 433 (540)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEESS-TTSHHHHHHHHHHHHHHHHTTCCCEEEECCEEESCSS-ST--TC----HHHHHH-
T ss_pred HHHHHHHHHHhCCccceEEEEecc-cccccHHHHHHHHHHHHHhCCcccEEEEeeEecCCCC-CC--CC----HHHHHH-
Confidence 99999999999997 788886532 1111 11 111 10 11 344455578754210 01 01 122222
Q ss_pred HHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHh--------CCCcEEEEcccCCCCCCc
Q 009560 427 REAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNA--------ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 427 ~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~--------~~~Gw~yW~~k~e~~~Ws 492 (532)
.+..++ ..|.||.|+|+.........+.+...++++..+.++-+ ...|-++|.+.. ...|-
T Consensus 434 ---~l~~~a-~~Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D-~~sW~ 502 (540)
T 2w5f_A 434 ---ALQKYI-NIGCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPND-ANTWL 502 (540)
T ss_dssp ---HHHHHH-TTTSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSST-TSCTT
T ss_pred ---HHHHHH-hcCCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCceeEEEEEcCCC-CCccc
Confidence 233344 34789999999986432222233333444444444421 245899999887 45564
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.18 E-value=0.0002 Score=77.46 Aligned_cols=238 Identities=11% Similarity=0.055 Sum_probs=132.7
Q ss_pred HcCCCEEEEccccccccC-------CC---------CCCCCCcChHHHHHHHHHHHHHcCC-EEEEEcCCCCCCC--CCC
Q 009560 236 RHGINTVRIPVGWWIAFD-------PD---------PPAPFIGGSLEALDNALSWAEAYNI-KCIIDLHAAPGSQ--NGM 296 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~~-------~~---------~~~~~~~~~l~~Ld~~v~~a~k~Gi-~VILDlH~~pGsq--n~~ 296 (532)
.+|++.+|+||+--.+.. +. +...|+...-.....+++.|+++|. +++...-.+|+.. |+.
T Consensus 62 Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~ 141 (507)
T 3clw_A 62 GMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFTNSAPYFMTRSAS 141 (507)
T ss_dssp SCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHHHHTTCCCEEEECSSCCGGGSSSSS
T ss_pred CceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHHHHcCCCeEEEeCCCCcHHhccCCC
Confidence 579999999996422211 00 0011211111124467888888888 6776777777642 221
Q ss_pred CCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCC--CCC--------CCCcccHHHHHHHHHHHHH
Q 009560 297 EHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEP--SAA--------TVPLDILVPYYKQGYQIVR 365 (532)
Q Consensus 297 ~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP--~~~--------~~~~~~l~~~~~~~~~aIR 365 (532)
.. +. .+...-..++..+.+.++....+++|+.+. .|.++.+.||| ... ..+.+...+|++.+..+++
T Consensus 142 ~~-~~-~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~ 219 (507)
T 3clw_A 142 TV-ST-DQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAIS 219 (507)
T ss_dssp SS-CC-CSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred cc-CC-CCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 11 10 011112356788899999999999998653 68889999999 431 1346678899999999999
Q ss_pred hhCCCcEEEEeC--CCC------CC-----Cc-hhhhhc-----cCCCCc--EEEEeeecccCCCccccCChhhhHHHHH
Q 009560 366 KYSPTAYVIVCQ--RIG------NA-----DP-LELYQA-----NIGLHN--IVVDLHYYNLFDTFFVNMSTVDNILFIY 424 (532)
Q Consensus 366 ~~~~~~~Viv~~--~~~------~~-----~~-~~~~~~-----~~~~~n--vv~s~H~Y~~f~~~~~~~~~~~~i~~i~ 424 (532)
+.+.+..|++.+ .+. +. .+ ..+.+. ..+..+ .++.+|.|.... +.. .+..++
T Consensus 220 ~~g~~~kI~~~d~~~~~~~~d~~n~~~~~~~~~~~~~d~~a~~yv~g~~~~~diia~H~Y~~~~------~~~-~l~~~r 292 (507)
T 3clw_A 220 EAQIDTKILIPEVGDMKYLFEIDSIAKTPDDIIHSMFYKDGQYSVLKFKNLFNCVAAHDYWSAY------PAT-LLVDIR 292 (507)
T ss_dssp HHTCSCEEEEEEESSGGGGSCCCSCTTCCCCHHHHHHSTTSTTCCTTCTTEEEEEEECCTTCSS------SHH-HHHHHH
T ss_pred hcCCCceEEEeccccccccccccccccchhhHHHhhcCcchHhhhhccccccceEEEeeCCCCC------Ccc-hhhhHH
Confidence 999877777652 110 01 11 112211 111222 359999996311 111 111222
Q ss_pred HHHHHHHHHHHhc--CCCcEEEeccCcc---cCCC-CCCHH----HHHHHHHHHHHHHHh-CCCcEEEEcccC
Q 009560 425 KSREAQLQALNNA--NGPLVFIGEWVNE---WNVT-SGTQK----DYQDFGSAQLEVYNA-ASFGWAYWTLKN 486 (532)
Q Consensus 425 ~~~~~~~~~~~~~--~g~pv~vGEwG~~---~~~~-~a~~~----~~~~~~~~ql~~~~~-~~~Gw~yW~~k~ 486 (532)
+++..++++ .+++++.+|.+.. +... +.... .-..+.+....-+.. ..-+|.+|..-.
T Consensus 293 ----~~~~~~a~~~~~~k~lw~TE~~~~g~~~~~~~~~~~~~~~~~a~~~a~~i~~~l~~~~~~a~~~Wn~~~ 361 (507)
T 3clw_A 293 ----NRIHKELSANGHNTKFWASEYCILEKNEEITMPASPERSINLGLYVARIIHNDLTLANASAWQWWTAVS 361 (507)
T ss_dssp ----HHHHHHHHTTSSCCEEEECCCCSCCCCTTTCSSSCHHHHHHHHHHHHHHHHHHHHTSCCSEEEEEESEE
T ss_pred ----HHHHHHHhhccCCCceEEeeeccCCCCcccccCCCCcccHHHHHHHHHHHHHHHHhCCCcEEEEchhhc
Confidence 223333444 5899999999851 1100 11111 223344444444454 566999998776
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=8.7e-06 Score=95.26 Aligned_cols=122 Identities=13% Similarity=0.169 Sum_probs=87.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC-CCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH-SASRDGTT 306 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~-sg~~~g~~ 306 (532)
+.||+.||++|+|+||+.- + + . + ++..++|-++||.|+-|+... |. |.. ........
T Consensus 377 ~~dl~~~k~~g~N~iR~~h-~-----~--~-~---------~~fydlcDelGilVw~e~~~~-~~---w~~~~~~~~~~~ 434 (1032)
T 2vzs_A 377 ADKLKYVLNLGLNTVRLEG-H-----I--E-P---------DEFFDIADDLGVLTMPGWECC-DK---WEGQVNGEEKGE 434 (1032)
T ss_dssp HHHHHHHHHTTCCEEEEES-C-----C--C-C---------HHHHHHHHHHTCEEEEECCSS-SG---GGTTTSTTSSSC
T ss_pred HHHHHHHHHcCCCEEECCC-C-----C--C-c---------HHHHHHHHHCCCEEEEccccc-cc---ccccCCCCCccc
Confidence 6789999999999999932 1 1 1 1 377899999999999998432 10 100 00001123
Q ss_pred CCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 307 DWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 307 ~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
.|. ++..+.+.+-++.+.+|++++|+|+.|.+.||+... ..+.+.+.+.+|+.||+++++.+.++
T Consensus 435 ~~~-~~~~~~~~~~~~~~V~R~rNHPSIi~Ws~gNE~~~~-------~~~~~~~~~~~k~~DptRpv~~~s~~ 499 (1032)
T 2vzs_A 435 PWV-ESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAASA 499 (1032)
T ss_dssp CCC-TTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCSSS
T ss_pred ccC-hhHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCch-------HHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 453 455677888899999999999999999999998642 24556778899999999998876543
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=4.4e-05 Score=82.13 Aligned_cols=197 Identities=18% Similarity=0.174 Sum_probs=112.9
Q ss_pred HHHHHHHHHcCC-CEEEEccc------cccccCCCCCCC---CC---------cC--hHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGI-NTVRIPVG------WWIAFDPDPPAP---FI---------GG--SLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~-N~VRIpv~------ww~~~~~~~~~~---~~---------~~--~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++-++.+|++|. -.||+.=. |.....|....| .. .. .-..+|+++++|++-|..+|+.+
T Consensus 60 ~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~l 139 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGL 139 (488)
T ss_dssp HHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEE
Confidence 678888999999 99999322 211111110001 01 11 23459999999999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC--------CCCCcccHHHHHH
Q 009560 287 HAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA--------ATVPLDILVPYYK 358 (532)
Q Consensus 287 H~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~--------~~~~~~~l~~~~~ 358 (532)
-...+ ++ +...+.++.+...-+ ...+..|||-|||.. ...+.+.+.+.+.
T Consensus 140 N~g~~------------------~~---~~a~~~v~y~~~~~~-~~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~ 197 (488)
T 3vny_A 140 NLGKG------------------TP---ENAADEAAYVMETIG-ADRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQ 197 (488)
T ss_dssp CTTTS------------------CH---HHHHHHHHHHHHHHC-TTTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHH
T ss_pred eCCCC------------------CH---HHHHHHHHHHhhccc-CCceeEEEecCcccccccCCccCCCCCHHHHHHHHH
Confidence 75210 12 233444444443212 236889999999963 1245677778888
Q ss_pred HHHHHHHhhCCCcEEEEeCCCCCCCc-hhhhhccCCCCcEEEEeeecccCCCcc-c------cCChhhhHHHHHHHHHHH
Q 009560 359 QGYQIVRKYSPTAYVIVCQRIGNADP-LELYQANIGLHNIVVDLHYYNLFDTFF-V------NMSTVDNILFIYKSREAQ 430 (532)
Q Consensus 359 ~~~~aIR~~~~~~~Viv~~~~~~~~~-~~~~~~~~~~~nvv~s~H~Y~~f~~~~-~------~~~~~~~i~~i~~~~~~~ 430 (532)
+..++||+.+|+..++-.+..+..++ ..++.. .+..=..++.|+|.. .+.. . -+++...++.+ .+.
T Consensus 198 ~~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~-~~~~vd~vS~H~Y~~-g~~~~~~~t~~~ll~~~~~l~~~----~~~ 271 (488)
T 3vny_A 198 RFFTAIRKRVPNAPFAGPDTAYNTKWLVPFADK-FKHDVKFISSHYYAE-GPPTDPSMTIERLMKPNPRLLGE----TAG 271 (488)
T ss_dssp HHHHHHHHHCTTCCEEEEEESSCGGGHHHHHHH-TGGGCSEEEEEEEEE-CCTTCTTCCHHHHTSCCHHHHHH----HHH
T ss_pred HHHHHHHhhCCCCeEEeCCCCCCchhhHHHHHh-cCccCCEEEEeeCCC-CCCCCCCcCHHHHcCchHHHHHH----HHH
Confidence 89999999999865433221111111 223332 233445799999974 1110 0 11222112211 122
Q ss_pred HHHHHhcCCCcEEEeccCcccC
Q 009560 431 LQALNNANGPLVFIGEWVNEWN 452 (532)
Q Consensus 431 ~~~~~~~~g~pv~vGEwG~~~~ 452 (532)
+....+..++|+++||++..+.
T Consensus 272 ~~~~~~~~g~p~~lgEtnsa~~ 293 (488)
T 3vny_A 272 LKQVEADTGLPFRLTETNSCYQ 293 (488)
T ss_dssp HHHHHHHHCCCEEEEEEEEEST
T ss_pred HHHHHhcCCCCEEEeccccCCC
Confidence 3333445588999999998765
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.11 E-value=1.4e-05 Score=86.17 Aligned_cols=158 Identities=16% Similarity=0.166 Sum_probs=95.5
Q ss_pred HHHHHHHHHcCCCEEEEcc-------ccccccCCC--CCCCCCcChHH--------HHHHHHHHHHHcCCEEEEEcCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPV-------GWWIAFDPD--PPAPFIGGSLE--------ALDNALSWAEAYNIKCIIDLHAAP 290 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv-------~ww~~~~~~--~~~~~~~~~l~--------~Ld~~v~~a~k~Gi~VILDlH~~p 290 (532)
.+-++.||++|+-.||.|= .|-....|. .+..++ ..|. -+|+.+++|++.|..+++.+-...
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~-~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~g~ 132 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVN-THWGGVIENNHFGTHEFMMLCELLGCEPYISGNVGS 132 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEE-TTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccC-CCCCcccccCccCHHHHHHHHHHcCCeEEEEEECCC
Confidence 6778899999999999984 232222221 011111 0121 148999999999999999886521
Q ss_pred CCCCCCCCCCCCCCCCCCCChhhHHHHHHH--------HHHHHHHhCC-CC-cEEEEEeccCCCCC--CCCcccHHHHHH
Q 009560 291 GSQNGMEHSASRDGTTDWPASDYISQTLDV--------IDFLASRYAK-HP-ALLGIELLNEPSAA--TVPLDILVPYYK 358 (532)
Q Consensus 291 Gsqn~~~~sg~~~g~~~W~~~~~~~~~~~~--------w~~la~ry~~-~p-~v~g~EL~NEP~~~--~~~~~~l~~~~~ 358 (532)
| ..+....++++ |..+..+++. .| .|--|||-|||... ..+.+.+.+.+.
T Consensus 133 g------------------~~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~ 194 (496)
T 2vrq_A 133 G------------------TVQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYR 194 (496)
T ss_dssp C------------------CHHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHH
T ss_pred C------------------cHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHH
Confidence 1 12222223332 3445455543 22 46679999999752 234567888889
Q ss_pred HHHHHHHhh-CCCcEEEEeCCCCCCCc---hhhhhccCCCCcEEEEeeeccc
Q 009560 359 QGYQIVRKY-SPTAYVIVCQRIGNADP---LELYQANIGLHNIVVDLHYYNL 406 (532)
Q Consensus 359 ~~~~aIR~~-~~~~~Viv~~~~~~~~~---~~~~~~~~~~~nvv~s~H~Y~~ 406 (532)
+..++||++ +|+..+|.++... .+. ..++.. ....-..++.|+|..
T Consensus 195 ~~a~a~k~~~dp~i~~ia~G~~~-~~~~W~~~~l~~-~~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 195 QFQTYLRNYGDNKLHKIACGANT-ADYHWTEVLMKQ-AAPFMHGLSLHYYTV 244 (496)
T ss_dssp HHHHTCCCCTTCCCEEEEEEEET-TCHHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHHHhCCCCCeEEEEeCCCC-CCcchHHHHHHh-CCCCCCEEEEeecCC
Confidence 999999999 8876666543221 121 222222 123455799999964
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-05 Score=82.53 Aligned_cols=158 Identities=16% Similarity=0.173 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCCEEEEc-------cccccccCCC---CCCC---C--Cc-ChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIP-------VGWWIAFDPD---PPAP---F--IG-GSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-------v~ww~~~~~~---~~~~---~--~~-~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
.+-++.||+++.-.+|.| ..|.....|. |... + .+ +.+ -+++.+++|++.|..+++.+-.--
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~f-G~~Ef~~~~e~~gaep~~~vN~G~- 148 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRF-GTDEFIEYCREIGAEPYISINMGT- 148 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCS-CHHHHHHHHHHHTCEEEEECCCSS-
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCC-CHHHHHHHHHHhCCeEEEEEECCC-
Confidence 677888999999999998 2343333331 1100 1 01 111 379999999999999999875411
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHHHHHH--------HHHHHHhCC-CC-cEEEEEeccCCCCC----CCCcccHHHHH
Q 009560 292 SQNGMEHSASRDGTTDWPASDYISQTLDVI--------DFLASRYAK-HP-ALLGIELLNEPSAA----TVPLDILVPYY 357 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~~~~~~~~~~w--------~~la~ry~~-~p-~v~g~EL~NEP~~~----~~~~~~l~~~~ 357 (532)
+ ..+....++++. ..+-...+. .| .|--|||-|||.+. ..+.+.+.+.+
T Consensus 149 --------g---------~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~~t~e~Y~~~~ 211 (504)
T 3ug3_A 149 --------G---------TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGHMTADEYARAA 211 (504)
T ss_dssp --------C---------CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTCCCHHHHHHHH
T ss_pred --------C---------CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccCCCHHHHHHHH
Confidence 0 122222233332 223233322 23 56679999999763 23567888999
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCCCCCc-hhhhhccCCCCcEEEEeeeccc
Q 009560 358 KQGYQIVRKYSPTAYVIVCQRIGNADP-LELYQANIGLHNIVVDLHYYNL 406 (532)
Q Consensus 358 ~~~~~aIR~~~~~~~Viv~~~~~~~~~-~~~~~~~~~~~nvv~s~H~Y~~ 406 (532)
.+..++||+.+|+..||.++... ..+ ..++.. .+..-..++.|+|..
T Consensus 212 ~~~a~Aik~~dP~I~lia~G~~~-~~W~~~~l~~-~~~~vD~vs~H~Y~~ 259 (504)
T 3ug3_A 212 KEYTKWMKVFDPTIKAIAVGCDD-PIWNLRVLQE-AGDVIDFISYHFYTG 259 (504)
T ss_dssp HHHHHHHHHHCTTCEEEECCCSC-HHHHHHHHHH-HTTTCSEEEEEEEEC
T ss_pred HHHHHHHHHhCCCcEEEEECCCC-cchhHHHHHh-cccCCCEEEEeeCCC
Confidence 99999999999998777654321 111 122222 234567899999985
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00038 Score=73.99 Aligned_cols=224 Identities=11% Similarity=0.083 Sum_probs=130.5
Q ss_pred HcCCCEEEEcccccccc------CCCC----CCCCCc-ChHHHHHHHHHHHHH--cCCEEEEEcCCCCCCC--CCCCCCC
Q 009560 236 RHGINTVRIPVGWWIAF------DPDP----PAPFIG-GSLEALDNALSWAEA--YNIKCIIDLHAAPGSQ--NGMEHSA 300 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~------~~~~----~~~~~~-~~l~~Ld~~v~~a~k--~Gi~VILDlH~~pGsq--n~~~~sg 300 (532)
-+|++.+|+||+--.+. +..+ ...|+- ...+.+-.+++.|++ .+|+++...-..|+.. |+....|
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~g 159 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGG 159 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSC
T ss_pred CCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCC
Confidence 58999999999632111 1000 012211 122244567788888 4689999998888742 2211111
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC------CCcccHHHHHH-HHHHHHHhhCC-Cc
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT------VPLDILVPYYK-QGYQIVRKYSP-TA 371 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~------~~~~~l~~~~~-~~~~aIR~~~~-~~ 371 (532)
....++..+.++++.....+.|+++. .+.++.+.|||.... .+.+...+|++ .+..++++.+. +.
T Consensus 160 ------g~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~ 233 (447)
T 2wnw_A 160 ------GKLRRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEM 233 (447)
T ss_dssp ------CBBCGGGHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTC
T ss_pred ------CcCCHHHHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 13356888888888888888887653 577889999998742 34567788887 56778999877 45
Q ss_pred EEEEeCCCCCCCchhhhhccCCC-----CcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHH-hcCCCcEEEe
Q 009560 372 YVIVCQRIGNADPLELYQANIGL-----HNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN-NANGPLVFIG 445 (532)
Q Consensus 372 ~Viv~~~~~~~~~~~~~~~~~~~-----~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~-~~~g~pv~vG 445 (532)
.|++.+.... ...++......+ .-.++++|.|.. . ... . +..+. +..+++++.+
T Consensus 234 kI~~~D~n~~-~~~~~~~~il~d~~a~~~v~~ia~H~Y~g--~------~~~---~--------l~~~~~~~p~k~lw~T 293 (447)
T 2wnw_A 234 EIYIWDHDKD-GLVDWAELAFADEANYKGINGLAFHWYTG--D------HFS---Q--------IQYLAQCLPDKKLLFS 293 (447)
T ss_dssp EEEEEEEEGG-GHHHHHHHHTTSHHHHHHCCEEEEECTTC--C------CHH---H--------HHHHHHHCTTSEEEEE
T ss_pred eEEEeCCCcc-chhhHHHHHhcCHhHHhhCCEEEEEccCC--C------cHH---H--------HHHHHHHCCCCeEEEe
Confidence 5665542211 111121111111 124799999953 1 111 1 11122 2347889999
Q ss_pred ccCcc-cCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEccc
Q 009560 446 EWVNE-WNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLK 485 (532)
Q Consensus 446 EwG~~-~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k 485 (532)
|.+.. |...+........|.+..+..+....-+|.+|..-
T Consensus 294 E~~~~~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ 334 (447)
T 2wnw_A 294 EGCVPMESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLL 334 (447)
T ss_dssp ECCCBCCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESE
T ss_pred ccccCCcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhh
Confidence 99854 21111111233455666665566677799999876
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00021 Score=77.06 Aligned_cols=233 Identities=14% Similarity=0.104 Sum_probs=131.1
Q ss_pred HHcCCCEEEEcccccccc------CCCCC----CCCCcChH--HHHHHHHHHHHHc---CCEEEEEcCCCCCCC--CCCC
Q 009560 235 YRHGINTVRIPVGWWIAF------DPDPP----APFIGGSL--EALDNALSWAEAY---NIKCIIDLHAAPGSQ--NGME 297 (532)
Q Consensus 235 a~~G~N~VRIpv~ww~~~------~~~~~----~~~~~~~l--~~Ld~~v~~a~k~---Gi~VILDlH~~pGsq--n~~~ 297 (532)
.-+|++.+|+||+--.+. +..+. +.|+-+.= +..-.+++.|+++ +|+++...-.+|+.. |+..
T Consensus 112 ~Glglsi~R~~IG~~d~s~~~ysy~d~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~wMk~n~~~ 191 (497)
T 2nt0_A 112 EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAV 191 (497)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSS
T ss_pred CCCceEEEEEeecCCCCCCCCccccCCCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHHHhcCCCc
Confidence 358999999999632110 11111 12221111 2344677778775 699999999988742 2211
Q ss_pred C-CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC----------CCcccHHHHHH-HHHHHH
Q 009560 298 H-SASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT----------VPLDILVPYYK-QGYQIV 364 (532)
Q Consensus 298 ~-sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~----------~~~~~l~~~~~-~~~~aI 364 (532)
. .|... ....++..+.++++.....+.|+++. .|.++.+.|||.... .+.+...+|++ .+..++
T Consensus 192 ~ggG~L~---~~~~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L 268 (497)
T 2nt0_A 192 NGKGSLK---GQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTL 268 (497)
T ss_dssp SSSCBBS---SCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHH
T ss_pred CCCCccC---CccchhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 1 11110 00113488888888888888887653 577899999997631 24566788888 567788
Q ss_pred HhhCC-CcEEEEeCCCC--CCCc-hhhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH-HhcC
Q 009560 365 RKYSP-TAYVIVCQRIG--NADP-LELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL-NNAN 438 (532)
Q Consensus 365 R~~~~-~~~Viv~~~~~--~~~~-~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~-~~~~ 438 (532)
++.+- +..|++.+... ..+. ...+.-+ ....-..+++|.|..... .... .+ ... ++..
T Consensus 269 ~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a~~~v~~ia~H~Y~~~~~-----~~~~---~l--------~~~~~~~p 332 (497)
T 2nt0_A 269 ANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLA-----PAKA---TL--------GETHRLFP 332 (497)
T ss_dssp HTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSCC-----CHHH---HH--------HHHHHHCT
T ss_pred HhcCCCCceEEEecCCCCcchhHHHHHhcChhhHhhcceEEEEecCCCCC-----ChHH---HH--------HHHHHHCC
Confidence 88764 55666654211 1111 1111111 112234799999964210 1111 01 111 2244
Q ss_pred CCcEEEeccCccc---C--CCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 439 GPLVFIGEWVNEW---N--VTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 439 g~pv~vGEwG~~~---~--~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+++++.+|.+... . ....+...-..+.+..+..+....-+|.+|.+-.
T Consensus 333 ~k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~Wnl~l 385 (497)
T 2nt0_A 333 NTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLAL 385 (497)
T ss_dssp TSEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEE
T ss_pred CCcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEeeeeee
Confidence 7889999987542 1 0112334445666677766776666999998753
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00013 Score=76.12 Aligned_cols=207 Identities=13% Similarity=0.107 Sum_probs=119.0
Q ss_pred cCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCCChhhH
Q 009560 237 HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQ--NGMEHSASRDGTTDWPASDYI 314 (532)
Q Consensus 237 ~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq--n~~~~sg~~~g~~~W~~~~~~ 314 (532)
+|++.+|+|++-- ...|. .-..+++.|+++|++++...-.+|+.. |+.... ..-..++..
T Consensus 45 ~g~s~~R~~ig~~-------~~~~~-----~~~~~~k~A~~~~~~i~aspWSpP~wMk~n~~~~~------~g~L~~~~~ 106 (383)
T 2y24_A 45 IGLSIMRVRIDPD-------SSKWN-----IQLPSARQAVSLGAKIMATPWSPPAYMKSNNSLIN------GGRLLPANY 106 (383)
T ss_dssp CCCCEEEEEECSS-------GGGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGBTTSSSBS------CCBBCGGGH
T ss_pred ccceEEEEecCCc-------ccccc-----cchHHHHHHHhcCCeEEEecCCCcHHHhCCCCCCC------CCcCCHHHH
Confidence 8999999999631 01222 114566788999999999988888742 221110 112346788
Q ss_pred HHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC------CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC-CCCc-h
Q 009560 315 SQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT------VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG-NADP-L 385 (532)
Q Consensus 315 ~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~------~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~-~~~~-~ 385 (532)
+.+.++.....++|+++. .+.++.+.|||.... .+.+...+|++.....++ +..|++++... ..+. .
T Consensus 107 ~~yA~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~----~~kI~~~d~~~~d~~~~~ 182 (383)
T 2y24_A 107 SAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFG----SLKVIVAESLGFNPALTD 182 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGST----TSEEEEEEETTCCGGGTH
T ss_pred HHHHHHHHHHHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhc----CCEEEeecccccchhcch
Confidence 899999999999998653 577889999998742 123445555554332222 24455543211 1111 1
Q ss_pred hhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHH
Q 009560 386 ELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDF 464 (532)
Q Consensus 386 ~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~ 464 (532)
..+..+ ....-..+++|.|.. . .. .. .. .+..+++++.+|.+........+-..-..+
T Consensus 183 ~~l~d~~a~~~v~~i~~H~Y~~-~--~~-----~~-~~------------~~~~~k~lw~TE~~~~~~~~~~~w~~~~~~ 241 (383)
T 2y24_A 183 PVLKDSDASKYVSIIGGHLYGT-T--PK-----PY-PL------------AQNAGKQLWMTEHYVDSKQSANNWTSAIEV 241 (383)
T ss_dssp HHHTCHHHHTTCCEEEEECTTS-C--CC-----CC-HH------------HHHTTCEEEEEEECSCTTSCTTCHHHHHHH
T ss_pred hhccCHhHHhhccEEEEecCCC-C--cc-----cc-hh------------hhcCCCeEEEeccccCCCcccCchhHHHHH
Confidence 111111 112235799999964 1 11 10 00 123478899999875321112233444556
Q ss_pred HHHHHHHHHhCCCcEEEEcccC
Q 009560 465 GSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 465 ~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.+.....+...--+|.+|....
T Consensus 242 a~~i~~~l~~~~~~~~~W~~~~ 263 (383)
T 2y24_A 242 GTELNASMVSNYSAYVWWYIRR 263 (383)
T ss_dssp HHHHHHHHHTTCSEEEEEESBS
T ss_pred HHHHHHHHhcCccEEEEeeccC
Confidence 6666666665556999998853
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.4e-05 Score=78.86 Aligned_cols=136 Identities=24% Similarity=0.236 Sum_probs=95.7
Q ss_pred HHHHHHHHHcCCCEEEEcc-cc--ccccCCCC---CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPV-GW--WIAFDPDP---PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv-~w--w~~~~~~~---~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~ 301 (532)
+++|+.||++|++.|=|-- +. +... |+. .........+.|+.+++.|+|+||+|.+.++..+. +.+.+
T Consensus 57 ~~~~~~mK~~GikyvIl~~~~~~gf~~~-pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~----~W~~~- 130 (340)
T 4h41_A 57 DLDFQHMKRIGIDTVIMIRSGYRKFMTY-PSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGR----YWDTG- 130 (340)
T ss_dssp HHHHHHHHHTTCCEEEESCSEETTEESS-CCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSH----HHHHS-
T ss_pred HHHHHHHHHcCCCEEEEEEEeeCCeecc-CcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChh----hcCCC-
Confidence 7999999999999884421 11 1111 110 00111124577999999999999999999885321 11111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhC-CCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYA-KHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~-~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
.. +...++...+++.+.++|. ++|++.||-|-||+... ......+++.+.+.+++..++.++++++..
T Consensus 131 ---d~----~~e~e~~~~~i~El~~~Yg~~h~af~GWYi~~Ei~~~---~~~~~~~~~~l~~~lk~ls~~lp~~ISpy~ 199 (340)
T 4h41_A 131 ---DL----SWEIEDNKYVIDEVWKMYGEKYKSFGGWYISGEISRA---TKGAIDAFRAMGKQCKDISNGLPTFISPWI 199 (340)
T ss_dssp ---CG----GGGHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCSSC---CTTHHHHHHHHHHHHHHHTTSCCEEECCCC
T ss_pred ---CH----HHHHHHHHHHHHHHHHHhhccCCCeeEEEeccccCch---hhhHHHHHHHHHHHHHHhcCCCceEEeecc
Confidence 11 1246777788999999997 58999999999999753 345678899999999999999999888643
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00087 Score=66.38 Aligned_cols=166 Identities=14% Similarity=0.063 Sum_probs=100.0
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCC---------------CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDP---------------PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~---------------~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
+.-|+.+.+-|+|+||| ++++=.+.++.. ++...-..-..|.++++.|++||++||+.=- +
T Consensus 40 D~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSSW-Y-- 116 (393)
T 3gyc_A 40 DQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSSW-Y-- 116 (393)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEECC-C--
T ss_pred HHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEehh-h--
Confidence 78899999999999999 222211111110 1111113577899999999999999999744 2
Q ss_pred CCCCCCCCCCCCCCCCCCCh-hhHHHHHHHHHHHHHH-hCCCCcEEEEEeccCCCCCC----------------CCcccH
Q 009560 292 SQNGMEHSASRDGTTDWPAS-DYISQTLDVIDFLASR-YAKHPALLGIELLNEPSAAT----------------VPLDIL 353 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~-~~~~~~~~~w~~la~r-y~~~p~v~g~EL~NEP~~~~----------------~~~~~l 353 (532)
|+ +.+...... ..+ ...+.+.+.+++|.++ |. ..|...||.||-.... ...+.+
T Consensus 117 -QQ--spseal~a~---~R~e~lA~aw~~lLdfi~~~GL~--drIAyVELhNEv~~~~la~~~~~~~~~vg~~a~~~e~l 188 (393)
T 3gyc_A 117 -RL--DVDEVCLKL---DTPEKLADCWLTILRSIEEDGLL--DTILYVDLCNEWPGDSWAPFFAKTYPNVGWGNWYKEES 188 (393)
T ss_dssp -CC--BTTCGGGGC---CSHHHHHHHHHHHHHHHHHTTCG--GGEEEEESSTTTTCTTTCHHHHTTCTTTCTTCTTSHHH
T ss_pred -hc--CHHHHHhhh---ccHHHHHHHHHHHHHHHHHccch--hceeeEeeeccccCcccccccCccccccccchhhhHhh
Confidence 11 111111110 011 2233444455555543 32 4788899999954421 123579
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhccCCCCcEEEEeeecccC
Q 009560 354 VPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLF 407 (532)
Q Consensus 354 ~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f 407 (532)
..|++++++++|+.-|+.+|..+-. -.+.+.+.+. +..--..+++|..-.+
T Consensus 189 ~~~lee~v~~lR~~hP~lpvt~SyT--~~~~~~~~~~-d~sfldfle~h~wm~~ 239 (393)
T 3gyc_A 189 LRWMKTSLEKMRQVYPDMPFLYSFD--HGDVKKYEEV-DCSFLDLYEHHIWMAQ 239 (393)
T ss_dssp HHHHHHHHHHHHTTCTTSCEECCBC--CSCTTHHHHS-CCTTCSSEEBCCCGGG
T ss_pred hHHHHHHHHHHHHhCCCCeeeeeec--cchhhhhhcc-CchHHhhhhhHHHhhc
Confidence 9999999999999999999876632 2343444443 3333345778876554
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00098 Score=68.23 Aligned_cols=226 Identities=12% Similarity=0.144 Sum_probs=126.1
Q ss_pred cCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEE---EEcCC-CCCCCCCCCCCCCCCCCC---C
Q 009560 237 HGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI---IDLHA-APGSQNGMEHSASRDGTT---D 307 (532)
Q Consensus 237 ~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VI---LDlH~-~pGsqn~~~~sg~~~g~~---~ 307 (532)
.-||.|-. .+-| ...+|.++ .| .++..|+++++|+++||.|- |-.|. .|+ |-... .++.. .
T Consensus 36 ~~Fn~it~EN~mKw-~~~ep~~G-~~---~f~~aD~~v~~a~~ngi~vrGHtLvWh~q~P~----W~~~~-~d~~g~~~~ 105 (341)
T 3ro8_A 36 MHHDVVTAGNAMKP-DALQPTKG-NF---TFTAADAMIDKVLAEGMKMHGHVLVWHQQSPA----WLNTK-KDDNNNTVP 105 (341)
T ss_dssp HHCSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCG----GGTEE-ECTTSCEEE
T ss_pred HhCCEEEECcccch-hHhcCCCC-cc---chHHHHHHHHHHHhCCCEEEeccccCcccCCH----HHhcc-CccccccCC
Confidence 44999887 5554 44555543 33 46889999999999999984 33342 121 11110 01111 1
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC----------cccH-----HHHHHHHHHHHHhh-----
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP----------LDIL-----VPYYKQGYQIVRKY----- 367 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~----------~~~l-----~~~~~~~~~aIR~~----- 367 (532)
+..++..+++.++++.+++||++ .|..||++|||...... ...| .+|+..+.++-|++
T Consensus 106 ~s~~~l~~~~~~hI~~vv~rYkg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~p 183 (341)
T 3ro8_A 106 LGRDEALDNLRTHIQTVMKHFGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDENP 183 (341)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHHST
T ss_pred CCHHHHHHHHHHHHHHHHHHcCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhcccCC
Confidence 22245678899999999999997 57789999999753210 1112 24778889999998
Q ss_pred CCCcEEEEeCCCCCCCc----------hhhhhc-------cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHH
Q 009560 368 SPTAYVIVCQRIGNADP----------LELYQA-------NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQ 430 (532)
Q Consensus 368 ~~~~~Viv~~~~~~~~~----------~~~~~~-------~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~ 430 (532)
+|+..+++-+..- ..+ +.+... ..+-+-+-+..|.-... ++ ..+. +.
T Consensus 184 dp~akL~~NDYn~-~~~~k~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~~-------~~----~~~~----~~ 247 (341)
T 3ro8_A 184 SWNIKLYYNDYNE-DNQNKATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNINT-------NP----DNVK----LS 247 (341)
T ss_dssp TCCCEEEEEESCT-TSHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETTC-------CH----HHHH----HH
T ss_pred CCCcEEEEecCCC-cccchHHHHHHHHHHHHHhhhcccCCCCccceeeechhccCCC-------CH----HHHH----HH
Confidence 6788888865321 111 111110 12356677888864321 12 1222 23
Q ss_pred HHHHHhcCCCcEEEeccCcccCCCC-CCHH---HHHHHHHHHHHHHHh---CCCcEEEEcccCCCCCCc
Q 009560 431 LQALNNANGPLVFIGEWVNEWNVTS-GTQK---DYQDFGSAQLEVYNA---ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 431 ~~~~~~~~g~pv~vGEwG~~~~~~~-a~~~---~~~~~~~~ql~~~~~---~~~Gw~yW~~k~e~~~Ws 492 (532)
+..++. .|.||.|+|+=....... .+.+ .....++.++.+|.+ ...|-++|.+.. ...|-
T Consensus 248 l~~~a~-lGl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~~~v~giT~WG~~D-~~sW~ 314 (341)
T 3ro8_A 248 LEKFIS-LGVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHADHIARVTFWGMDD-NTSWR 314 (341)
T ss_dssp HHHHHT-TTCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTGGGEEEEEEC----------
T ss_pred HHHHHH-cCCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCceEEEEeCCCC-CCccC
Confidence 344443 478999999977532111 1111 122334555556654 345999999887 44453
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0037 Score=61.41 Aligned_cols=105 Identities=20% Similarity=0.209 Sum_probs=79.6
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCC----CCc--ceEEEEEec---CCeEEEEe-cCCeEEEEeCCCc---eEE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVA----SSW--ETFTLWRVS---ESEFQFRT-SQGQFLTCDGEGC---VVS 133 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~----~~w--E~f~~~~~~---~~~~~lr~-~~~~~v~~~~~g~---~~~ 133 (532)
..|.+|+.-||||-..-.+.+..++|+++.. +.| -.|+++.+. .++++|++ -.|+|+.....+. ...
T Consensus 55 g~vhIR~~~n~kyW~R~~~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~~~~~g~~ 134 (303)
T 1jlx_A 55 GLVHIKSRYTNKYLVRWSPNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYL 134 (303)
T ss_dssp TCEEEEETTTCCEEEESSTTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCSTTCCSEE
T ss_pred CEEEEEecCCCceeeecCCCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecCCceeeEE
Confidence 5689999889999999655567899986655 354 679999985 57899999 7899998876553 245
Q ss_pred EeecCC---CCCceEEEEEcC-----CC-cEEEEecCCceEEeccCc
Q 009560 134 ATAKSP---STPETFEIERNN-----DS-RVHIKLKSGTYLQATLGN 171 (532)
Q Consensus 134 a~~~~~---~~~e~F~~v~~~-----~~-~v~i~a~nG~~l~a~~~~ 171 (532)
+..+++ +.-+-|+++.-. +. .|.+|..||+||.+...+
T Consensus 135 ~~~~~~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNgkYL~~~~~~ 181 (303)
T 1jlx_A 135 FAESSQIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITIN 181 (303)
T ss_dssp ECCCSSCCTTCTTCEEEEESGGGGCCCCSSEEEECTTSCEEEEEEET
T ss_pred EEcccccccccCCcEEEEchhhhhhCcceeEEEEcCCCcEEEEEEcC
Confidence 555554 445568865543 44 899999999999998755
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.022 Score=57.21 Aligned_cols=237 Identities=14% Similarity=0.078 Sum_probs=126.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.|++.|++.||| | ++ + ..+++.++..||+|+|.+-.. . . .
T Consensus 16 ~~vv~llk~~~i~~vRl---Y----~~------d-------~~vL~A~~~tgi~v~lgv~n~----------~-~---~- 60 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRI---Y----FA------D-------GQALSALRNSGIGLILDIGND----------Q-L---A- 60 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SC------C-------HHHHHHTTTSCCEEEEECCGG----------G-H---H-
T ss_pred HHHHHHHHhcCCCEEEE---c----CC------C-------HHHHHHHHhcCCEEEEecccc----------c-h---h-
Confidence 45667789999999998 1 11 1 267778888999999986531 0 0 0
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCC-cEEEEeCC---CCCCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPT-AYVIVCQR---IGNAD 383 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~-~~Viv~~~---~~~~~ 383 (532)
.-...++...+..+.-...|.....|.++-+-||+... ..+.+..+++.+.+++++.+-+ .+|..... |.++.
T Consensus 61 -~~a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~--~~~~L~~am~~v~~aL~~~gl~~ikVst~~~~~~~~~s~ 137 (306)
T 1ghs_A 61 -NIAASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGG--ATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSF 137 (306)
T ss_dssp -HHHHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCS
T ss_pred -hhhhCHHHHHHHHHHHHhhhCCCceEEEEEEeccccCC--CHHHHHHHHHHHHHHHHHCCCCceeEEeccchhhcccCC
Confidence 00011222222223333445444678888899999763 6778999999999999998764 45544322 22111
Q ss_pred c-----------hhhhhccCCCCcEEEEeeecccCCCcc-------------------cc---CChhhhHHHHHHHHHHH
Q 009560 384 P-----------LELYQANIGLHNIVVDLHYYNLFDTFF-------------------VN---MSTVDNILFIYKSREAQ 430 (532)
Q Consensus 384 ~-----------~~~~~~~~~~~nvv~s~H~Y~~f~~~~-------------------~~---~~~~~~i~~i~~~~~~~ 430 (532)
| ...+++ .......+.+|.|+.|.... +. .......+...+ ..
T Consensus 138 pPs~g~F~~~~~~p~l~f-L~~~~~~~~vN~yPyf~~~~~p~~i~l~yalf~~~~~v~d~~t~~~y~n~fda~~D---av 213 (306)
T 1ghs_A 138 PPSAGVFKNAYMTDVARL-LASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVD---AV 213 (306)
T ss_dssp SGGGCEESSTHHHHHHHH-HHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHH---HH
T ss_pred CCCccchhhhhhhHHHHH-HHhcCCeeEeecChhhcccCCCCccccchhhcCCCcceeccccccccchHHHHHHH---HH
Confidence 1 111111 11112235555555553210 00 001111121111 12
Q ss_pred HHHHHh--cCCCcEEEeccCcccC-CCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEcccCCCCCCch--HhhHhC
Q 009560 431 LQALNN--ANGPLVFIGEWVNEWN-VTSGTQKDYQDFGSAQLEVYNA------ASFGWAYWTLKNDRKHWDF--EWNIRN 499 (532)
Q Consensus 431 ~~~~~~--~~g~pv~vGEwG~~~~-~~~a~~~~~~~~~~~ql~~~~~------~~~Gw~yW~~k~e~~~Ws~--~~~~~~ 499 (532)
...+++ ..++||+|+|-|=... ...++.+..++|.+..+....+ .++..++-+.-+| .|.- ...-.-
T Consensus 214 ~~al~~~g~~~~~ivVsEtGWPS~G~~~as~~na~~y~~~li~~~~~GTP~rp~~~~~yiF~lfdE--~~K~~~~~E~~w 291 (306)
T 1ghs_A 214 YAALEKAGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLINHVGGGTPKKREALETYIFAMFNE--NQKTGDATERSF 291 (306)
T ss_dssp HHHHHHHTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHTTGGGCCSSCCSCCCEEEECSBCC--TTCCSSGGGGGC
T ss_pred HHHHHHcCCCCCeEEEeeccCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCCCCCceEEEEEEECC--CCCCCCCCCCee
Confidence 223333 3468999999994322 2357788888898887654431 1344455555543 3332 223345
Q ss_pred CcccCCCCC
Q 009560 500 NYLQLGNSP 508 (532)
Q Consensus 500 g~~~~~~~p 508 (532)
|++..+.+|
T Consensus 292 Glf~~d~~~ 300 (306)
T 1ghs_A 292 GLFNPDKSP 300 (306)
T ss_dssp CSBCTTSCB
T ss_pred eeECCCCCE
Confidence 666544444
|
| >1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.012 Score=47.51 Aligned_cols=101 Identities=17% Similarity=0.241 Sum_probs=80.4
Q ss_pred EEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEE
Q 009560 70 QIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIER 149 (532)
Q Consensus 70 ~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~ 149 (532)
+||| -+|-|+|||.- .|-.--.--.--.-|- ++.-++.++||+..||||+..+... +--.----|.-.-|.++-
T Consensus 5 afk~-hhgh~lsae~~---~vkthhghhdhhthfh-venhg~kvalrth~gkyvsigdhkq-vylshh~hg~hslfhleh 78 (118)
T 1hcd_A 5 AFKS-HHGHFLSAEGE---AVKTHHGHHDHHTHFH-VENHGGKVALKTHCGKYLSIGDHKQ-VYLSHHLHGDHSLFHLEH 78 (118)
T ss_dssp EEES-STTCEEEEETT---EEEEECSCSSCCCCCE-EEEETTEEEEESSSSCEEEEEETTE-EEEECCCSSSSSSBEEEE
T ss_pred hhhh-ccCeeeecccc---ccccccCcccccceEE-eecCCceEEEEeccCcEEEecCCce-EEEEeeecCcceeEeeec
Confidence 5786 78999999975 5554444444455677 5556779999999999999977664 666666778889999999
Q ss_pred cCCCcEEEEecCCceEEeccCceEEeCC
Q 009560 150 NNDSRVHIKLKSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 150 ~~~~~v~i~a~nG~~l~a~~~~~v~ad~ 177 (532)
. .++|.||..+-.|+.++.-+.|...-
T Consensus 79 h-~gkvsikghhhhyi~~d~hghv~t~~ 105 (118)
T 1hcd_A 79 H-GGKVSIKGHHHHYISADHHGHVSTKE 105 (118)
T ss_dssp E-TTEEEEECSTTCEEEECGGGCEEEES
T ss_pred c-CCEEEEecccceEEeccCCccccccc
Confidence 9 79999999999999999888877654
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.012 Score=65.10 Aligned_cols=225 Identities=14% Similarity=0.028 Sum_probs=123.0
Q ss_pred cChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcccccccc-CCCCCCCC----CcCh-HHHHHHHHHHHHHcC--C
Q 009560 209 YGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAF-DPDPPAPF----IGGS-LEALDNALSWAEAYN--I 280 (532)
Q Consensus 209 ~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~-~~~~~~~~----~~~~-l~~Ld~~v~~a~k~G--i 280 (532)
+..++..++|+..+++- +-+|++.+|+||+--.+. +...+..+ ++.. ....-.+++.|++++ |
T Consensus 46 l~~~~r~~il~~lFs~~---------~Gigls~~R~~IG~~dfs~~~~~~~~f~~~~d~~~~~~~~i~~lk~A~~~~p~l 116 (656)
T 3zr5_A 46 YPEPYRSEILDYLFKPN---------FGASLHILKVEIGGDGQTTDGTEPSHMHYELDENYFRGYEWWLMKEAKKRNPDI 116 (656)
T ss_dssp CCTTHHHHHHHHHHSTT---------TSSCCSEEEEEECCSSBCSSSBCCCSCSSTTCCCSCCSSHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHcCCC---------CCCeeEEEEEEecCCCccCCCCCCcCCccccccchhhchhHHHHHHHHHhCCCc
Confidence 44455566666665431 358999999999642221 11111111 1111 112234455555554 8
Q ss_pred EEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHh-CCC-CcEEEEEeccCCCCCCCCcccHHHHHH
Q 009560 281 KCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRY-AKH-PALLGIELLNEPSAATVPLDILVPYYK 358 (532)
Q Consensus 281 ~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry-~~~-p~v~g~EL~NEP~~~~~~~~~l~~~~~ 358 (532)
+++...-.+|+.... + + .+ .+++.+.+++++....+.| +.+ -.+.++.+.|||... .+|++
T Consensus 117 ki~aspWSpP~WMK~----n---~--~l-~~~~y~~yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~-------~~fik 179 (656)
T 3zr5_A 117 ILMGLPWSFPGWLGK----G---F--SW-PYVNLQLTAYYVVRWILGAKHYHDLDIDYIGIWNERPFD-------ANYIK 179 (656)
T ss_dssp EEEEEESCBCGGGGT----T---S--SC-TTSSHHHHHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC-------HHHHH
T ss_pred EEEEecCCCcHHhcc----C---C--CC-ChHHHHHHHHHHHHHHHHHHHhcCCceEEEeeccCCCcc-------ccHHH
Confidence 899998888874311 0 0 11 3567777777777777664 332 467788999999753 35677
Q ss_pred HHHHHHHhhCCC-cEEEEeC-CCCCCCchhhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHH
Q 009560 359 QGYQIVRKYSPT-AYVIVCQ-RIGNADPLELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN 435 (532)
Q Consensus 359 ~~~~aIR~~~~~-~~Viv~~-~~~~~~~~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 435 (532)
.+..++++.+.+ ..|++.+ .+. .-+..++.-+ ....-.++.+| |.. +. .. .. +
T Consensus 180 ~L~p~L~~~gl~~~kI~~~D~n~~-~~~~~il~d~~a~~~v~gia~H-Y~g-~~-----~~-~~---------------~ 235 (656)
T 3zr5_A 180 ELRKMLDYQGLQRVRIIASDNLWE-PISSSLLLDQELWKVVDVIGAH-YPG-TY-----TV-WN---------------A 235 (656)
T ss_dssp HHHHHHHHTTCTTCEEEEEEECST-THHHHHHHCHHHHHHCCEEEEE-SCT-TC-----CC-HH---------------H
T ss_pred HHHHHHHHcCCCccEEEEcCCCch-HHHHHHhcCHhHHhhccEEEEE-CCC-CC-----cc-hH---------------h
Confidence 888899999886 5566654 332 1111111111 11223579999 542 11 11 00 1
Q ss_pred hcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHH-HHhCCCcEEEEcccCC
Q 009560 436 NANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEV-YNAASFGWAYWTLKND 487 (532)
Q Consensus 436 ~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~-~~~~~~Gw~yW~~k~e 487 (532)
...+++++.+|.+..++. ......|.+..... .....-+|.+|..-.+
T Consensus 236 ~~p~k~lw~TE~~~~~~~----~~g~g~wa~~i~~~~~~~~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 236 KMSGKKLWSSEDFSTINS----NVGAGCWSRILNQNYINGNMTSTIAWNLVAS 284 (656)
T ss_dssp HHHTCEEEEEEEECSCTT----HHHHHHHHHHHHHHHHHHCCCEEEEECSEEC
T ss_pred hCCCCceEEEccccCCCC----CCCccHHHHHHHHHHHhCCceEEEEEeeeeC
Confidence 123578999998764431 12223444443322 2446679999987643
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0055 Score=66.23 Aligned_cols=127 Identities=13% Similarity=0.033 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhCCC-CcEEEEEeccCCCCC--C--C------CcccHHHHHHHHHHHHHhhC---CCcEEEEeC--CCC
Q 009560 317 TLDVIDFLASRYAKH-PALLGIELLNEPSAA--T--V------PLDILVPYYKQGYQIVRKYS---PTAYVIVCQ--RIG 380 (532)
Q Consensus 317 ~~~~w~~la~ry~~~-p~v~g~EL~NEP~~~--~--~------~~~~l~~~~~~~~~aIR~~~---~~~~Viv~~--~~~ 380 (532)
..++.+.++++|+.. +.-.-||++|||... . . +.+.+.+|+..+.++||+.. |+..|. |. +|.
T Consensus 120 ~~a~a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVG-GpasA~p 198 (591)
T 4aw7_A 120 VQAAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVI-GYAAAYP 198 (591)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEE-EEEESCC
T ss_pred HHHHHHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEe-ccccccc
Confidence 455666667777644 345569999999832 2 1 14578999999999999876 665543 32 332
Q ss_pred C---CCc-------hhhhhccCCCCcEEEEeeecccCCCc----cccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEec
Q 009560 381 N---ADP-------LELYQANIGLHNIVVDLHYYNLFDTF----FVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGE 446 (532)
Q Consensus 381 ~---~~~-------~~~~~~~~~~~nvv~s~H~Y~~f~~~----~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGE 446 (532)
. .+. ..|++. .+.+=..+|+|.|...-.. .++...+..+|.|.. ....+-...+|++|+|
T Consensus 199 ~~e~~nF~~W~~~~k~Fmd~-ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~-----Ys~~k~G~vKP~~ISE 272 (591)
T 4aw7_A 199 AWEDGNFNYWNTRMKMFIDR-AGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEA-----YSYIKFGHVKPLAISE 272 (591)
T ss_dssp CTTTTTTHHHHHTHHHHHHH-HGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHH-----HHHHHHSSCCCEEEEE
T ss_pred cccccchhhhhHHHHHHHHh-cCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHH-----HHHHHhCCCcceEEec
Confidence 1 122 222232 4566788999999863110 011112223333322 2222334578999999
Q ss_pred cCcc
Q 009560 447 WVNE 450 (532)
Q Consensus 447 wG~~ 450 (532)
+|..
T Consensus 273 YG~~ 276 (591)
T 4aw7_A 273 FGGI 276 (591)
T ss_dssp EEEE
T ss_pred cCCc
Confidence 9975
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.017 Score=60.74 Aligned_cols=151 Identities=13% Similarity=0.177 Sum_probs=86.4
Q ss_pred HHHHHHHHcCCCEEEEccccccccCCCCCCCC---Cc--ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF---IG--GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~---~~--~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
+-++.|+++|+++|=|.=-+-.-........| ++ +.++.++++|+.|+++||+||||+-- +|.+.
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~--------NH~s~-- 109 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTP--------NYRGE-- 109 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCT--------TTTSS--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECC--------CcCCC--
Confidence 45789999999999983212100000000000 11 46999999999999999999999863 34431
Q ss_pred CCCCCC---ChhhHHHHHHHHHHHHHHhCCCCcEEEEEecc-CCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 304 GTTDWP---ASDYISQTLDVIDFLASRYAKHPALLGIELLN-EPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 304 g~~~W~---~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~N-EP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
..|. .++.++...++.++..+ + +-..+- ++.++ -|. ...+.+...+++++..|+..++++..+
T Consensus 110 --~~wF~~q~~~Vr~~~~~~~~~Wl~-~-gvDGfR-lD~v~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~e~~ 176 (424)
T 2dh2_A 110 --NSWFSTQVDTVATKVKDALEFWLQ-A-GVDGFQ-VRDIENLKD--------ASSFLAEWQNITKGFSEDRLLIAGTNS 176 (424)
T ss_dssp --STTCSSCHHHHHHHHHHHHHHHHH-H-TCCEEE-ECCGGGSTT--------HHHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred --cccccccCHHHHHHHHHHHHHHHH-c-CCCEEE-EeccccCCc--------cHHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 1243 24556666666666665 3 333333 44444 221 123556666678888888777777654
Q ss_pred CCCCchhhhhccCCCCcEEEEeeec
Q 009560 380 GNADPLELYQANIGLHNIVVDLHYY 404 (532)
Q Consensus 380 ~~~~~~~~~~~~~~~~nvv~s~H~Y 404 (532)
. ++..+........+.++++|+.
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~f~~~ 199 (424)
T 2dh2_A 177 S--DLQQILSLLESNKDLLLTSSYL 199 (424)
T ss_dssp C--CHHHHHHHTTTCTTCEEECSTT
T ss_pred C--CHHHHHHHhccccccccchhhh
Confidence 2 3333333322222356666543
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0043 Score=60.94 Aligned_cols=101 Identities=8% Similarity=0.095 Sum_probs=79.2
Q ss_pred cccceEEEEEecCCeEEEEecCCCce-eEEcCCCCC-CcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecC--
Q 009560 64 LDGTQVQIKSVTLEKYVCAESGGGTD-VSVTRDVAS-SWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKS-- 138 (532)
Q Consensus 64 ~~g~~v~~~s~~~~~yv~ae~gg~~~-l~anr~~~~-~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~-- 138 (532)
|+..-|.||+ .||||+++...++.+ |-.+-++++ .+-.+++.-..+++|++|+ .+|+||.+...+= +.|.++.
T Consensus 160 LPk~~v~fKG-dNgkYL~~~~~~~~~~LqF~~~d~~d~~~~~qv~~~~dG~i~vks~~~~rFWR~s~~nW-I~ad~~d~~ 237 (303)
T 1jlx_A 160 FPKGYVTFKG-NNGKYLGVITINQLPCLQFGYDNLNDPKVAHQMFVTSNGTICIKSNYMNKFWRLSTDDW-ILVDGNDPR 237 (303)
T ss_dssp CCCSSEEEEC-TTSCEEEEEEETTEEEEEEEECCTTCGGGCEEEEECTTSCEEEEETTTTEEEEECGGGB-EEEEECCHH
T ss_pred CcceeEEEEc-CCCcEEEEEEcCCceeeEecCCCCCCCccceEEEEcCCceEEEEecCCCchhhcCCCCe-EEeCCCCCC
Confidence 5555799997 999999999988887 666766665 5578888778899999999 8999998874443 5553222
Q ss_pred --CCCCceEEEEEcCCCcEEEEec-CCceEE
Q 009560 139 --PSTPETFEIERNNDSRVHIKLK-SGTYLQ 166 (532)
Q Consensus 139 --~~~~e~F~~v~~~~~~v~i~a~-nG~~l~ 166 (532)
-.+-+.|..|+-+++.|.||.. |+.|+-
T Consensus 238 ~~~d~~~~F~pvrv~~~~iALrs~~n~~fck 268 (303)
T 1jlx_A 238 ETNEAAALFRSDVHDFNVISLLNMQKTWFIK 268 (303)
T ss_dssp HHCCGGGCEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCCCceeeEEEEecCCEEEEEecCCCceee
Confidence 1367899999988889999994 888885
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.029 Score=56.51 Aligned_cols=112 Identities=18% Similarity=0.183 Sum_probs=72.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.|++.|++.||| | +++ ..+++.++..||+|+|.+-... ..+
T Consensus 16 ~~vv~llk~~~i~~vRl---Y----~~d-------------~~vl~A~~~tgi~v~lgv~n~~-----~~~--------- 61 (312)
T 2cyg_A 16 SEVVSLYKSNNIARMRL---Y----DPN-------------QAALQALRNSNIQVLLDVPRSD-----VQS--------- 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SCC-------------HHHHHHHTTSCCEEEEEECHHH-----HHH---------
T ss_pred HHHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEeccccc-----hhh---------
Confidence 44567889999999998 1 211 2677888899999999875310 000
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCC--cEEEE
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPT--AYVIV 375 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~--~~Viv 375 (532)
-...++...+..+.-...|.....|.++-+-||+.........+..+++.+.+++++.+-. .+|..
T Consensus 62 --~a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl~~~ikVst 129 (312)
T 2cyg_A 62 --LASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVST 129 (312)
T ss_dssp --HHHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEE
T ss_pred --hhhCHHHHHHHHHHHHHhhCCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCCCCCeEEEe
Confidence 0001111222223333456445678888899999764456778999999999999998754 44443
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0048 Score=64.54 Aligned_cols=216 Identities=11% Similarity=0.090 Sum_probs=114.5
Q ss_pred HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCC-CCCCCCCCCCCCCCChhhH
Q 009560 236 RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNG-MEHSASRDGTTDWPASDYI 314 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~-~~~sg~~~g~~~W~~~~~~ 314 (532)
.+|++.+|+||+.-. ..|. ....+++.|++.||+++...-..|+..-. ....|.. ...-..+++.
T Consensus 46 g~g~s~~R~~ig~~~-------~~~~-----~~~~~~k~A~~~~~~i~aspWspP~WMk~~~~~~g~~--~~g~L~~~~y 111 (401)
T 3kl0_A 46 QLGFSILRIHVDENR-------NNWY-----KEVETAKSAVKHGAIVFASPWNPPSDMVETFNRNGDT--SAKRLKYNKY 111 (401)
T ss_dssp CCCCCEEEEEECSSG-------GGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGEEEEEETTEE--EEEEECGGGH
T ss_pred CCceEEEEEEeCCCc-------ccch-----hHHHHHHHHHhCCCEEEEecCCCCHHhccCCCcCCCc--cCCcCChHHH
Confidence 479999999997521 1222 23457777889999999999999874210 0000100 0111246778
Q ss_pred HHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhh-CC-CcEEEEeCCCCCCCc---hhhh
Q 009560 315 SQTLDVIDFLASRYAKHP-ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKY-SP-TAYVIVCQRIGNADP---LELY 388 (532)
Q Consensus 315 ~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~-~~-~~~Viv~~~~~~~~~---~~~~ 388 (532)
+.+.++.....+.|+++. .+.++.+.|||.... ....|. .++..+.||+. +| +..|++.+... .++ ..++
T Consensus 112 ~~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~~-~~~~~t--~~~~~~fi~~~lg~~~tkI~~~d~~~-~~~~~~~~il 187 (401)
T 3kl0_A 112 AAYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAH-EWTWWT--PQEILRFMRENAGSINARVIAPESFQ-YLKNLSDPIL 187 (401)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEESCSCTTSCT-TSCCCC--HHHHHHHHHHTGGGCSSEEEEEEESS-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEeeecccCCCC-CCCCCC--HHHHHHHHHHhccccCceEEecchhh-hhhhhhHHHh
Confidence 888888888888887653 577888999997632 111111 13333334432 12 24455654321 121 1111
Q ss_pred hccCCCC-cEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC--CCCHHHHHHHH
Q 009560 389 QANIGLH-NIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT--SGTQKDYQDFG 465 (532)
Q Consensus 389 ~~~~~~~-nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~--~a~~~~~~~~~ 465 (532)
.-+.... -.++.+|.|... ...+... .+ . ++..+++++.+|.+...... ..+.+.-..+.
T Consensus 188 ~D~~a~~~v~gia~H~Y~~~---~~~l~~~----~~--------~--~~~~~K~lw~TE~~~~~~~~~~~~~w~~al~~a 250 (401)
T 3kl0_A 188 NDPQALANMDILGTHLYGTQ---VSQFPYP----LF--------K--QKGAGKDLWMTEVYYPNSDTNSADRWPEALDVS 250 (401)
T ss_dssp TCHHHHHTCSEEEEECTTCC---GGGSCCH----HH--------H--HHCTTCEEEEEEECCSCCCTTCTTCTTTTHHHH
T ss_pred cCHhHHhhCcEEEEEcCCCC---cccccch----hH--------H--hhCCCCeEEEEecccCCCCCccccchhHHHHHH
Confidence 1111111 146899999641 1211110 00 0 22446889999986543211 11111123455
Q ss_pred HHHHHHHHh-CCCcEEEEcccC
Q 009560 466 SAQLEVYNA-ASFGWAYWTLKN 486 (532)
Q Consensus 466 ~~ql~~~~~-~~~Gw~yW~~k~ 486 (532)
+.....+.. ..-+|.+|....
T Consensus 251 ~~I~~~l~~~~~~a~v~Wnl~~ 272 (401)
T 3kl0_A 251 QHIHNAMVEGDFQAYVWWYIRR 272 (401)
T ss_dssp HHHHHHHHTSCCSEEEEEESBS
T ss_pred HHHHHHHHhccCcEEEEccccc
Confidence 555555543 336999998854
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.16 Score=51.32 Aligned_cols=238 Identities=12% Similarity=0.078 Sum_probs=130.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-.+.||+.|++.||| | +++ ..++..++..||+|+|.+-.. +..
T Consensus 18 ~~Vv~llks~gi~~VRl---Y----~~D-------------~~vL~Al~~sgi~V~lGV~n~-------~l~-------- 62 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRI---Y----YPH-------------TNVFNALKGSNIEIILDVPNQ-------DLE-------- 62 (323)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SCC-------------HHHHHHHTTCCCEEEEEECGG-------GTG--------
T ss_pred HHHHHHHHhCCCCeEEe---c----CCC-------------HHHHHHHHhcCCeEEEecccc-------chh--------
Confidence 56677789999999998 1 221 377888889999999998641 000
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC---CcccHHHHHHHHHHHHHhhCCC--cEEEEeCC---C
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV---PLDILVPYYKQGYQIVRKYSPT--AYVIVCQR---I 379 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~---~~~~l~~~~~~~~~aIR~~~~~--~~Viv~~~---~ 379 (532)
+-...+...+.++.-.+.|.....|.++-+-||+..... ....+...++.+.+++++.+-+ ..|..... +
T Consensus 63 --~la~~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT~~~~~v~ 140 (323)
T 3ur8_A 63 --ALANPSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGLQNQIKVSTSTYSGLL 140 (323)
T ss_dssp --GGGSHHHHHHHHHHHTGGGTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGE
T ss_pred --hhhhHHHHHHHHHHHHhhhCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCCCCCceeeeeeecccc
Confidence 001123333333444455655678888889999976431 2567889999999999998754 45544321 2
Q ss_pred CCCCc--------------hhhhhccCCCCcEEEEeeecccCCCcc--ccCC---------------hhhhHHHHHHHHH
Q 009560 380 GNADP--------------LELYQANIGLHNIVVDLHYYNLFDTFF--VNMS---------------TVDNILFIYKSRE 428 (532)
Q Consensus 380 ~~~~~--------------~~~~~~~~~~~nvv~s~H~Y~~f~~~~--~~~~---------------~~~~i~~i~~~~~ 428 (532)
.++.| ..++++ ....+.-+-+|.|+.|.... ...+ .....+.+.+.
T Consensus 141 ~~s~pPS~g~F~~~~~~~~~pil~f-L~~~~sp~~vN~yPyf~~~~~~~~i~l~yAlf~~~~d~~~~Y~nlfDa~~Da-- 217 (323)
T 3ur8_A 141 TNTYPPRDSIFREEYKSFINPIIGF-LARHNLPLLANIYPYFGHIDNTNAVPLSYALFNQQRRNDTGYQNLFDALVDS-- 217 (323)
T ss_dssp ECCSSGGGCEECGGGHHHHHHHHHH-HHHTTCCEEEECCHHHHHHHCTTTSCHHHHHTCCSSCCTTSCSSHHHHHHHH--
T ss_pred ccCCCCCcceechhHHHHHHHHHHH-HHhcCCeeEEecchhhhhccCCCCCChhhhccccCCCccchHHHHHHHHHHH--
Confidence 11111 111111 11122334556665443110 0001 11112222221
Q ss_pred HHHHHHHh--cCCCcEEEeccCcccC-CCCCCHHHHHHHHHHHHHHHHhC---------CCcEEEEcccCCCCCCch--H
Q 009560 429 AQLQALNN--ANGPLVFIGEWVNEWN-VTSGTQKDYQDFGSAQLEVYNAA---------SFGWAYWTLKNDRKHWDF--E 494 (532)
Q Consensus 429 ~~~~~~~~--~~g~pv~vGEwG~~~~-~~~a~~~~~~~~~~~ql~~~~~~---------~~Gw~yW~~k~e~~~Ws~--~ 494 (532)
...++++ ..++||+|+|-|=... ...++.+..++|.+..+....+. .+..++.+.-+| .|.- +
T Consensus 218 -~~~Al~~~g~~~~~v~vsEtGWPs~G~~~as~~na~~y~~~li~~~~~~~GtP~rp~~~~~~y~F~lfde--~~K~g~~ 294 (323)
T 3ur8_A 218 -MYFATEKLGGQNIEIIVSESGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDE--NEKKGEA 294 (323)
T ss_dssp -HHHHHHTTTCTTCCEEEEEECCCSSSBTTBCHHHHHHHHHHHHHHHHHTCBCSSSBTCCCCEEEECSBCC--TTCCSSG
T ss_pred -HHHHHHHcCCCCceEEeccccCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCCceEEEEEeecC--CCCCCCC
Confidence 1223333 3468999999993322 23577888888988877655432 455555555554 2331 2
Q ss_pred hhHhCCcccCCCCC
Q 009560 495 WNIRNNYLQLGNSP 508 (532)
Q Consensus 495 ~~~~~g~~~~~~~p 508 (532)
....-|++..+.+|
T Consensus 295 ~E~~wGlf~~d~~~ 308 (323)
T 3ur8_A 295 SEKHFGLFNPDQRP 308 (323)
T ss_dssp GGGCCCSBCTTSCB
T ss_pred cCceeeEECCCCCE
Confidence 33455666544444
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.047 Score=58.03 Aligned_cols=58 Identities=24% Similarity=0.352 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhCCCC---cEEEEEeccCCCC----------CCCCcccHHHHHHHHHHHHHhhCCCcEEE
Q 009560 317 TLDVIDFLASRYAKHP---ALLGIELLNEPSA----------ATVPLDILVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 317 ~~~~w~~la~ry~~~p---~v~g~EL~NEP~~----------~~~~~~~l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
..++++.|.++|+... .|..|+|-|||.. ...+.+.+.+++.+..++||+++|+..|+
T Consensus 152 ~~e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~ 222 (517)
T 3ik2_A 152 MDEFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETF 222 (517)
T ss_dssp HHHHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 4567788889998652 7888999999952 23567889999999999999999997653
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.062 Score=48.36 Aligned_cols=106 Identities=13% Similarity=0.174 Sum_probs=76.5
Q ss_pred cccceEEEEEecCCeEEEEecCC---CceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeC----CCceEEEe
Q 009560 64 LDGTQVQIKSVTLEKYVCAESGG---GTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDG----EGCVVSAT 135 (532)
Q Consensus 64 ~~g~~v~~~s~~~~~yv~ae~gg---~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~----~g~~~~a~ 135 (532)
+++....|+++..||.+-...++ |++|+--.-.-++-..|++...+++.+.||. ..|+.+.+.+ .|..++--
T Consensus 24 ~~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~ 103 (165)
T 3pg0_A 24 MGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQY 103 (165)
T ss_dssp --CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEEEE
T ss_pred CCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCCccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEE
Confidence 55678899999999999876542 3455543333345778888888889999998 6788887753 34456655
Q ss_pred ecCCCCCceEEEEEcCCCcEEEEe-cCCceEEecc
Q 009560 136 AKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATL 169 (532)
Q Consensus 136 ~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~ 169 (532)
.-..+..+.|.++..+++.++|+. ..|+.|.+..
T Consensus 104 ~c~~~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~ 138 (165)
T 3pg0_A 104 SYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVEN 138 (165)
T ss_dssp CCCCCGGGCEEEEECSSSCEEEEETTTCCEEEEGG
T ss_pred cCCCCCccEEEEEECCCCEEEEEECCCCcEEEcCC
Confidence 555668899999998777888877 6788888764
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.16 Score=50.86 Aligned_cols=105 Identities=14% Similarity=0.129 Sum_probs=69.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++.++.||+.|++.||| | +++ ..+++.++..||+|+|.+-.. +.. .
T Consensus 16 ~~vv~llk~~~i~~VRl---Y----~~d-------------~~vL~A~~~tgi~v~lgv~n~-------~~~-----~-- 61 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRL---Y----APN-------------QAALQAVGGTGINVVVGAPND-------VLS-----N-- 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SCC-------------HHHHHHHTTSCCEEEEEECGG-------GHH-----H--
T ss_pred HHHHHHHHhcCCCEEEE---c----CCC-------------HHHHHHHHhcCCEEEEecccc-------hhh-----H--
Confidence 56677889999999998 1 111 366778889999999987531 000 0
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
-....+...+..+.-...| ....|.++-+-||+.... ...+..+++.+.+++++.+-+.
T Consensus 62 --~a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl~g~--~~~L~~am~~v~~aL~~~gl~~ 120 (306)
T 1aq0_A 62 --LAASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAGGA--TRNLVPAMKNVHGALVAAGLGH 120 (306)
T ss_dssp --HHHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCGGG--GGGHHHHHHHHHHHHHHTTCTT
T ss_pred --hhhCHHHHHHHHHHhhccC-CCccEEEEEecccccCCC--HHHHHHHHHHHHHHHHHCCCCc
Confidence 0112233333333334456 345688899999997632 6789999999999999987553
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.044 Score=59.97 Aligned_cols=137 Identities=14% Similarity=0.236 Sum_probs=83.2
Q ss_pred HHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC------
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ------ 293 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq------ 293 (532)
+.++.||++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |....+.
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 255 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVL 255 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHHH
Confidence 4589999999999998 441100 111111111111 468999999999999999999996 4332110
Q ss_pred -----CC---C---CC-C---CC-CCC-----------CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC
Q 009560 294 -----NG---M---EH-S---AS-RDG-----------TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA 346 (532)
Q Consensus 294 -----n~---~---~~-s---g~-~~g-----------~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~ 346 (532)
+. | .. + +. ... ...+.+++.++..++..++..++|+= ..+- +++.++-
T Consensus 256 ~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gv-DGfR-~D~~~~~--- 330 (583)
T 1ea9_C 256 KNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGI-DGWR-LDVANEV--- 330 (583)
T ss_dssp TTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCC-SEEE-ETTCTTS---
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCc-eEEE-ecccccC---
Confidence 00 0 00 0 00 000 12244577888888888888877742 3333 6666653
Q ss_pred CCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 347 TVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 347 ~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .++.+++.++|++..|+.+++-+
T Consensus 331 --~----~~f~~~~~~~v~~~~p~~~~igE 354 (583)
T 1ea9_C 331 --S----HQFWREFRRVVKQANPDAYILGE 354 (583)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHhhCCCeEEEEE
Confidence 2 45778888889999998765544
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A | Back alignment and structure |
|---|
Probab=96.27 E-value=0.089 Score=46.14 Aligned_cols=107 Identities=22% Similarity=0.396 Sum_probs=79.7
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCce-
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPET- 144 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~- 144 (532)
..|-|++..+|.|+-....| .|.+-|+.-+.--.+++.-++-+.+++|. ..|.|++.+..|. |.+++.. .+-++
T Consensus 6 ~~~~~~~~~~g~~L~I~~dG--~V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~G~-v~Gs~~~-s~ec~f 81 (132)
T 3q7x_A 6 HEVLLRSTETGQFLRINPDG--TVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGT-VDGTRDR-SDPGIQ 81 (132)
T ss_dssp CCEEEEETTTCCEEEECTTS--BEEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSB-EEEECC--CCGGGC
T ss_pred hhheeeeccCcEEEEECCCC--cEEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCCCC-EeeccCC-CCCcee
Confidence 46889999999999997765 55555555555556666667778999999 8899999988885 8887664 33343
Q ss_pred EEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 145 FEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 145 F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
+++.-.+.+.|.|+. ..|.||+.+..|.+.+..
T Consensus 82 lE~~~~~~g~v~ikg~~sg~YLamnk~G~lygs~ 115 (132)
T 3q7x_A 82 FQISPEGNGEVLLRSTETGQFLRINPDGTVDGTR 115 (132)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEECTTSBEEEEC
T ss_pred EEEEeecCcEEEEEeccCCeEEEECCCCcCcCCC
Confidence 555443356788887 789999999999887653
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.011 Score=63.78 Aligned_cols=104 Identities=19% Similarity=0.216 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHcCCEEEEEcCCC-------CCCCCCC-CCCCCCCCCCCCC------------Ch---hhHHHHHHHHHH
Q 009560 267 ALDNALSWAEAYNIKCIIDLHAA-------PGSQNGM-EHSASRDGTTDWP------------AS---DYISQTLDVIDF 323 (532)
Q Consensus 267 ~Ld~~v~~a~k~Gi~VILDlH~~-------pGsqn~~-~~sg~~~g~~~W~------------~~---~~~~~~~~~w~~ 323 (532)
.+|+.++||++.|..++|.+.-. .|...-+ .+++ ..|. +| ........+++.
T Consensus 91 ~~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~-----~~w~e~~n~~~~~~~~~p~~~~g~~~~~~~~~~ 165 (524)
T 2yih_A 91 VVTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPS-----ARWNQVVNAKNAPFQLQPDLNDNYVYVDEFVHF 165 (524)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSS-----TTEEEEESCCCSCCCSSCCSSSSEEEHHHHHHH
T ss_pred hHHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcc-----cchhhhhccccCcccccCCCCCcchhHHHHHHH
Confidence 38999999999999999998752 1110000 0000 0010 00 011123467788
Q ss_pred HHHHhCCC--C-cEEEEEeccCCCC----------CCCCcccHHHHHHHHHHHHHhhCCCcEEEE
Q 009560 324 LASRYAKH--P-ALLGIELLNEPSA----------ATVPLDILVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 324 la~ry~~~--p-~v~g~EL~NEP~~----------~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
+.++|+.. | .|-.|+|-|||.. ...+.+.+.+.+.+..++||++||+..|+.
T Consensus 166 lr~~~G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 166 LVNKYGTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp HHHHHCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHcCCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 88898653 2 3666899999974 123567888999999999999999977663
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.007 Score=63.56 Aligned_cols=60 Identities=22% Similarity=0.458 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC--IIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~V--ILDlH~~pG 291 (532)
+..++.||++|++.|.++| ||...++..|..| .|..++++++.+++.||++ ||.+|...|
T Consensus 36 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7777787766677 5899999999999999997 899998644
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.066 Score=58.59 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=82.0
Q ss_pred HHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCC-------
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGS------- 292 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs------- 292 (532)
+.++.||++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |....+
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 259 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVW 259 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHHH
Confidence 5589999999999998 441100 011110000011 468999999999999999999996 433211
Q ss_pred ----CCC------CCCCCC-------C--------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC
Q 009560 293 ----QNG------MEHSAS-------R--------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT 347 (532)
Q Consensus 293 ----qn~------~~~sg~-------~--------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~ 347 (532)
.+. ++.... . .....+.+++.++..++..+...++|+= ..+- +|+.++-
T Consensus 260 ~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~gi-DGfR-~D~a~~~---- 333 (588)
T 1j0h_A 260 KNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDI-DGWR-LDVANEI---- 333 (588)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCC-CEEE-ETTGGGS----
T ss_pred hcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCC-cEEE-EeccccC----
Confidence 000 000000 0 0011344677788888888888877742 3333 6666653
Q ss_pred CCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 348 VPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 348 ~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .++.+++.++|++..|+.+++-+
T Consensus 334 -~----~~f~~~~~~~v~~~~p~~~~igE 357 (588)
T 1j0h_A 334 -D----HEFWREFRQEVKALKPDVYILGE 357 (588)
T ss_dssp -C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -C----HHHHHHHHHHHHHhCCCeEEEEE
Confidence 1 45777888889999998765543
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.38 Score=49.93 Aligned_cols=206 Identities=11% Similarity=0.035 Sum_probs=108.6
Q ss_pred cChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCC-CCCCCCCCCCCCCCCC----ChhhHHHHHHHHHHHHHH---hCCC-
Q 009560 262 GGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQ-NGMEHSASRDGTTDWP----ASDYISQTLDVIDFLASR---YAKH- 331 (532)
Q Consensus 262 ~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsq-n~~~~sg~~~g~~~W~----~~~~~~~~~~~w~~la~r---y~~~- 331 (532)
...++.+.+.+..+.++|--|.|..|-. |... +.++ +. ..+. ..+.-+.+.+.++.+|+. +++.
T Consensus 108 ~~~~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~~~~~-~~-----~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~ 181 (396)
T 2vx5_A 108 AVNFEKMQHWIKAGYSRGGVITISWHVFNPVSGGNSWD-KT-----PAVHELIPGGARHATLKAYLDTFVAFNEGLADVD 181 (396)
T ss_dssp CCBHHHHHHHHHHHHHTTCEEEEECCCCCTTTSCCTTC-CC-----CCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEEC
T ss_pred cCChHHHHHHHHHHHHCCCeEEEEEeeCCCCCCCCCcC-ch-----HHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhh
Confidence 3356666667777788899999999964 3211 1111 00 0000 001223455666666554 4332
Q ss_pred --C-----cEEEEEeccCCCCC-------CCCcccHHHHHHHHHHHHH-hhCCCcEEEEeCCCCCC-----Cchhhhhcc
Q 009560 332 --P-----ALLGIELLNEPSAA-------TVPLDILVPYYKQGYQIVR-KYSPTAYVIVCQRIGNA-----DPLELYQAN 391 (532)
Q Consensus 332 --p-----~v~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR-~~~~~~~Viv~~~~~~~-----~~~~~~~~~ 391 (532)
. .|+ |-+..|..+. ..+++.+++.++.+++++| ..+-+.++.+=...... +...+...-
T Consensus 182 ~~G~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~Y 260 (396)
T 2vx5_A 182 AQGNKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGY 260 (396)
T ss_dssp TTSCEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTC
T ss_pred ccCCccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcC
Confidence 1 334 7899998863 1247889999999999999 45556666552221110 112233332
Q ss_pred CCCC-cEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHH
Q 009560 392 IGLH-NIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLE 470 (532)
Q Consensus 392 ~~~~-nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~ 470 (532)
++++ =.++.+-.|......-...+.+.-.+.+ ......+..+++..++|+.|+|+|..... ++ ..|.+..++
T Consensus 261 PGDdyVDivG~D~Y~~~~~~~~~~~~~~f~~~~-~~~~~~l~~~a~~~~Kpial~E~G~~~~~---d~---~~w~~~l~~ 333 (396)
T 2vx5_A 261 PGDAYVDIIGLDNYWDVGHEANTASADEQKAAL-TASLKQLVQIARSKGKIAALTETGNNRLT---ID---NFWTERLLG 333 (396)
T ss_dssp CCGGGCSEEEEECCGGGTCTTCCSCHHHHHHHH-HHHHHHHHHHHHHHTCEEEEEEECCTTCC---ST---THHHHTTHH
T ss_pred CCCceEEEEEEeccCCCCCCccccchhhHHHHH-HHHHHHHHHHhhcCCCeEEEEeecCCCCC---ch---HHHHHHHHH
Confidence 4443 3688888887532110001111111111 12223444556667899999999986432 11 245554555
Q ss_pred HHHhCC--CcEEE
Q 009560 471 VYNAAS--FGWAY 481 (532)
Q Consensus 471 ~~~~~~--~Gw~y 481 (532)
.+.+.. ..|+|
T Consensus 334 ~~~~~~~v~~~~y 346 (396)
T 2vx5_A 334 PISADADASEIAY 346 (396)
T ss_dssp HHHTSTTGGGCCE
T ss_pred HHHhCccccceEE
Confidence 665544 44444
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.007 Score=63.47 Aligned_cols=60 Identities=18% Similarity=0.457 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC--IIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~V--ILDlH~~pG 291 (532)
+..++.||++|++.|.++| ||...++..+..| .|..++++++.+++.||++ ||.+|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7777787766677 5899999999999999997 899998654
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0084 Score=63.30 Aligned_cols=60 Identities=20% Similarity=0.457 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEE--EEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC--IIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~V--ILDlH~~pG 291 (532)
+..++.||++|++.|.++| ||-..++..|..| .|..++++++.+++.||++ ||.+|...|
T Consensus 34 ~a~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7777777666677 5899999999999999997 899998654
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.086 Score=55.87 Aligned_cols=138 Identities=19% Similarity=0.221 Sum_probs=81.7
Q ss_pred HHHHHHHHHcCCCEEEEc-cccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC---
Q 009560 228 IEDFNFLYRHGINTVRIP-VGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ--- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-v~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq--- 293 (532)
.+.++.||++|+|+|=|. +. .........+. ++ +..+.|+++|+.|+++||+||||+ |....+.
T Consensus 53 ~~~LdyL~~LGv~~I~l~Pi~--~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~ 130 (475)
T 2z1k_A 53 AEKLPYLLDLGVEAIYLNPVF--ASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQ 130 (475)
T ss_dssp HHTHHHHHHHTCCEEEECCCE--EESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHH
T ss_pred HHHhHHHHHcCCCEEEECCCc--CCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHH
Confidence 355789999999999983 31 11000011110 11 468999999999999999999997 5443210
Q ss_pred --------CCC---CC-CC-C------CC-----------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCC
Q 009560 294 --------NGM---EH-SA-S------RD-----------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343 (532)
Q Consensus 294 --------n~~---~~-sg-~------~~-----------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP 343 (532)
+.+ -+ .+ . .. ....+.+++.++..++..+... .|+ -..+- ++..++.
T Consensus 131 ~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~g-vDGfR-~D~~~~~ 207 (475)
T 2z1k_A 131 HLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFG-VDGWR-LDVPNEI 207 (475)
T ss_dssp HHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHT-CCEEE-ESSGGGC
T ss_pred HHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHH-HCC-CCEEe-ecccccC
Confidence 000 00 00 0 00 0123446777888888888777 553 23333 6666654
Q ss_pred CCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 344 ~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
. .+ .+.+++.+++|+..|+.+++ +..|
T Consensus 208 ~-----~~---~~~~~~~~~~~~~~p~~~~i-gE~~ 234 (475)
T 2z1k_A 208 P-----DP---TFWREFRQRVKGANPEAYIV-GEIW 234 (475)
T ss_dssp C-----CH---HHHHHHHHHHHHHCTTCEEE-ECCS
T ss_pred C-----HH---HHHHHHHHHHhhcCCCcEEE-EEec
Confidence 2 11 36677788899998877654 4434
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.11 Score=56.97 Aligned_cols=140 Identities=11% Similarity=0.014 Sum_probs=81.9
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-------ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-------AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-------~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq- 293 (532)
.+-++.|+++|+|+|=| |+.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |..+.+.
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~ 230 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWW 230 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGG
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcchh
Confidence 46688999999999998 332100 011100000011 478999999999999999999996 3332210
Q ss_pred --C----CC-------CCCCC-----C--------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEE
Q 009560 294 --N----GM-------EHSAS-----R--------------------DGTTDWPASDYISQTLDVIDFLASRYAKHPALL 335 (532)
Q Consensus 294 --n----~~-------~~sg~-----~--------------------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~ 335 (532)
. .| ..+.. . .....|.+++.++..++..+...+.|+= ..+-
T Consensus 231 ~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GV-DGfR 309 (601)
T 3edf_A 231 MKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGL-SGLR 309 (601)
T ss_dssp GGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTC-SEEE
T ss_pred hhhCCccCceeeCCCCCCCccccccccCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcCC-CEEE
Confidence 0 00 00000 0 0012234667778888888888876642 2222
Q ss_pred EEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 336 GIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 336 g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
+|..++. ..++.+++.+++++..|+.++ ++..|
T Consensus 310 -lD~~~~~---------~~~f~~~~~~~v~~~~p~~~~-vgE~~ 342 (601)
T 3edf_A 310 -IDTYGYS---------DGAFLTEYTRRLMAEYPRLNM-VGQEW 342 (601)
T ss_dssp -ESSGGGS---------CHHHHHHHHHHHHHHCTTCEE-EECCC
T ss_pred -eeccccC---------CHHHHHHHHHHHHHhCCCeEE-Eeeec
Confidence 5555432 245677788889999887764 55444
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.6 Score=46.92 Aligned_cols=239 Identities=13% Similarity=0.083 Sum_probs=126.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.||+.|++.||| .+++ ..+++.++..||+|+|.+-.. +- ..
T Consensus 17 ~~vv~llks~gi~~VRl-------YdaD-------------~~vL~Al~~sgi~v~vGV~n~-------~l-----~~-- 62 (316)
T 3em5_A 17 SEVIALYKKSNITRMRI-------YDPN-------------QAVLEALRGSNIELILGVPNS-------DL-----QS-- 62 (316)
T ss_dssp HHHHHHHHHTTCCEEEC-------SSCC-------------HHHHHHHTTCCCEEEEEECGG-------GH-----HH--
T ss_pred HHHHHHHHHcCCCEEEE-------ecCC-------------HHHHHHhhcCCceEEEecccc-------hh-----hh--
Confidence 57788889999999998 1221 157788999999999988531 00 00
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC-C---cccHHHHHHHHHHHHHhhCCC--cEEEEeCCC--
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV-P---LDILVPYYKQGYQIVRKYSPT--AYVIVCQRI-- 379 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~-~---~~~l~~~~~~~~~aIR~~~~~--~~Viv~~~~-- 379 (532)
-.......+..+.-...|.....|..+-+-||+..... + ...+...++.+.+++++.+-+ ..|.....+
T Consensus 63 ---la~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~v 139 (316)
T 3em5_A 63 ---LTNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTL 139 (316)
T ss_dssp ---HTSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTS
T ss_pred ---ccCHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEecccccc
Confidence 00111222222222334544567888889999876432 2 567888999999999998854 344332221
Q ss_pred -CCCCc--------------hhhhhcc-CCCCcEEEEeeecccCCCc----------cccCC---------hhhhHHHHH
Q 009560 380 -GNADP--------------LELYQAN-IGLHNIVVDLHYYNLFDTF----------FVNMS---------TVDNILFIY 424 (532)
Q Consensus 380 -~~~~~--------------~~~~~~~-~~~~nvv~s~H~Y~~f~~~----------~~~~~---------~~~~i~~i~ 424 (532)
.++.| ..++++. ....-+.+.++.|-.+... |.... .....+.+.
T Consensus 140 l~~s~pPS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~ 219 (316)
T 3em5_A 140 VGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATL 219 (316)
T ss_dssp EEECSSGGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHH
T ss_pred cccCCCCCCceechhHHHHHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHH
Confidence 11111 1112221 1334556666665443111 10000 011122222
Q ss_pred HHHHHHHHHHHhc--CCCcEEEeccCcccC-CCCCCHHHHHHHHHHHHHHHHh-------CCCcEEEEcccCCCCCCch-
Q 009560 425 KSREAQLQALNNA--NGPLVFIGEWVNEWN-VTSGTQKDYQDFGSAQLEVYNA-------ASFGWAYWTLKNDRKHWDF- 493 (532)
Q Consensus 425 ~~~~~~~~~~~~~--~g~pv~vGEwG~~~~-~~~a~~~~~~~~~~~ql~~~~~-------~~~Gw~yW~~k~e~~~Ws~- 493 (532)
+.. ..++++. .++||+|+|-|=... ...++.+..++|.+..+....+ ..+..++-+..+| .|.-
T Consensus 220 Da~---~~Al~~~g~~~~~v~V~EtGWPs~G~~~as~~na~~y~~~li~~~~~GTP~rp~~~~~~y~F~lfDe--~~K~~ 294 (316)
T 3em5_A 220 DAL---YSALERASGGSLEVVVSESGWPSAGAFAATFDNGRTYLSNLIQHVKRGTPKRPKRAIETYLFAMFDE--NKKQP 294 (316)
T ss_dssp HHH---HHHHHHTTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHHHTTSCCSSSCSSCCCEEESCSBCC--TTCSS
T ss_pred HHH---HHHHHHcCCCCCceEeccccCCCCCCCCCCHHHHHHHHHHHHHhccCCCCCCCCCCceEEEEEeecC--CCCCC
Confidence 222 2233333 468999999983322 2357788888998877654432 1233343344443 2332
Q ss_pred HhhHhCCcccCCCCC
Q 009560 494 EWNIRNNYLQLGNSP 508 (532)
Q Consensus 494 ~~~~~~g~~~~~~~p 508 (532)
.....-|++..+.+|
T Consensus 295 ~~E~~~Glf~~d~~~ 309 (316)
T 3em5_A 295 EVEKHFGLFFPNKWQ 309 (316)
T ss_dssp GGGGCCCSBCTTSCB
T ss_pred CCCceeeEECCCCCE
Confidence 233445666655444
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.12 Score=54.29 Aligned_cols=135 Identities=12% Similarity=0.178 Sum_probs=75.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-----------cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-----------FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-----------~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pG 291 (532)
.+.++.|+++|+++|=|+=-+... .++......++ +..+.|+++|+.|.++||+||+|+ |..++
T Consensus 33 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~~ 112 (449)
T 3dhu_A 33 TADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSPD 112 (449)
T ss_dssp HTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECTT
T ss_pred HHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcCc
Confidence 355789999999999984211110 01111101111 468999999999999999999997 33322
Q ss_pred CC----C-CCCC---CCC-CCCCCCC--------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHH
Q 009560 292 SQ----N-GMEH---SAS-RDGTTDW--------PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILV 354 (532)
Q Consensus 292 sq----n-~~~~---sg~-~~g~~~W--------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~ 354 (532)
+. . .|-+ .+. ......| .+++.++..+++++.+.++ -..+- ++...+ -..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~---vDGfR-lDaa~~---------~~~ 179 (449)
T 3dhu_A 113 SVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF---VDGYR-CDVAPL---------VPL 179 (449)
T ss_dssp SHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT---CSEEE-ETTGGG---------SCH
T ss_pred cchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh---CCEEE-EEChhh---------CCH
Confidence 10 0 0000 000 0011223 3456666666666665543 12222 333322 235
Q ss_pred HHHHHHHHHHHhhCCCcEEEE
Q 009560 355 PYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 355 ~~~~~~~~aIR~~~~~~~Viv 375 (532)
++.+++.+++++..|+..++-
T Consensus 180 ~f~~~~~~~~~~~~p~~~~~g 200 (449)
T 3dhu_A 180 DFWLEARKQVNAKYPETLWLA 200 (449)
T ss_dssp HHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHHHHhhCCCeEEEe
Confidence 677788889999999876543
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.11 Score=55.20 Aligned_cols=146 Identities=14% Similarity=0.176 Sum_probs=84.8
Q ss_pred HHHHHH--------HHcCCCEEEEc-ccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCC
Q 009560 229 EDFNFL--------YRHGINTVRIP-VGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPG 291 (532)
Q Consensus 229 ~d~~~l--------a~~G~N~VRIp-v~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pG 291 (532)
+-++.| +++|+++|=|. |.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |..+.
T Consensus 31 ~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~ 110 (488)
T 1wza_A 31 EKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSER 110 (488)
T ss_dssp HTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCTT
T ss_pred HhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccCc
Confidence 458899 99999999983 31100 011110000111 469999999999999999999996 43321
Q ss_pred C----------CCC---C---CCCC----------C-----------------CCCCCCCCChhhHHHHHHHHHHHHHHh
Q 009560 292 S----------QNG---M---EHSA----------S-----------------RDGTTDWPASDYISQTLDVIDFLASRY 328 (532)
Q Consensus 292 s----------qn~---~---~~sg----------~-----------------~~g~~~W~~~~~~~~~~~~w~~la~ry 328 (532)
+ .+. | .... . ......|.+++.++...+..++..++
T Consensus 111 ~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~~~pdln~~np~Vr~~i~~~~~~Wl~~- 189 (488)
T 1wza_A 111 HPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIGIAKYWLKQ- 189 (488)
T ss_dssp SHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHHHHHHHHHHHT-
T ss_pred cHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCCCCcccccCCHHHHHHHHHHHHHHHHc-
Confidence 1 000 0 0000 0 00112344667777788877777775
Q ss_pred CCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 329 AKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 329 ~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
+-..+- ++..+.-... .+.....++.+++.+++|+..| .++++..|.
T Consensus 190 -gvDGfR-~Da~~~i~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~vgE~~~ 236 (488)
T 1wza_A 190 -GVDGFR-LDGAMHIFPP-AQYDKNFTWWEKFRQEIEEVKP--VYLVGEVWD 236 (488)
T ss_dssp -TCCEEE-EECCCTTSCG-GGTTHHHHHHHHHHHHHTTTSC--CEEEEECCS
T ss_pred -CCCChh-HhhHhhhccc-cCcchHHHHHHHHHHHHhhcCC--CEEEEEeCC
Confidence 444443 6766643211 0123456788889999999888 455665553
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.41 Score=47.34 Aligned_cols=180 Identities=11% Similarity=0.039 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 266 EALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 266 ~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
..+.+.++.+.+.|--++|..|-..++ ..+. ..| +..+...++.++|. .+ +.| |+ +-+..|..+
T Consensus 49 ~~~~~~~~~~~~~G~i~~isw~P~~~~--~~~i---~~G-------~~d~~i~~~A~~l~-~~-g~p-V~-~R~~hE~nG 112 (283)
T 2v3g_A 49 SWVRPYADAVYNNGSILMITWEPWEYN--TVDI---KNG-------KADAYITRMAQDMK-AY-GKE-IW-LRPLHEANG 112 (283)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCC--HHHH---HTT-------TTHHHHHHHHHHHH-HH-CSC-EE-EEESCCTTS
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCC--HHHh---cCC-------chHHHHHHHHHHHH-hc-CCc-EE-EEeccccCC
Confidence 345667778899999999999932100 0000 001 11112222222222 23 445 43 789999886
Q ss_pred C------C-----CCcccHHHHHHHHHHHHHhhCCCcEEEE-eCCCCC-CCchhhhhccCCCC-cEEEEeeecccCCCc-
Q 009560 346 A------T-----VPLDILVPYYKQGYQIVRKYSPTAYVIV-CQRIGN-ADPLELYQANIGLH-NIVVDLHYYNLFDTF- 410 (532)
Q Consensus 346 ~------~-----~~~~~l~~~~~~~~~aIR~~~~~~~Viv-~~~~~~-~~~~~~~~~~~~~~-nvv~s~H~Y~~f~~~- 410 (532)
. . .+++.+++.++.+++++|+.+.+.++.+ ++.-.. .+...+...-++++ =.++++-.|......
T Consensus 113 ~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~~~ 192 (283)
T 2v3g_A 113 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQS 192 (283)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCT
T ss_pred CcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCccchhhhCCCCCEEEEEEEEccCCCCccc
Confidence 3 1 2578899999999999999866666555 211100 01122233323333 346777777642211
Q ss_pred cccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHH
Q 009560 411 FVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVY 472 (532)
Q Consensus 411 ~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~ 472 (532)
+... .. ....+. ...+.. .+..++|+.|+|+|.... +.+ ...|++..++.+
T Consensus 193 ~~~~-~~-~f~~~~---~~~~~~-~~~~~Kpi~i~E~G~~~~--ggd---k~~W~~~~~~~~ 243 (283)
T 2v3g_A 193 WGSQ-WQ-SFDQVF---SRAYQA-LASINKPIIIAEFASAEI--GGN---KARWITEAYNSI 243 (283)
T ss_dssp TTCC-CC-CHHHHH---HHHHHH-HTTSSSCEEEEEEEECST--TSC---HHHHHHHHHHHH
T ss_pred ccch-hH-hHHHHH---HHHHHH-HHhCCCcEEEEeecCCCC--CCc---hHHHHHHHHHHH
Confidence 1100 00 111111 112222 245789999999997642 222 245666655554
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.19 Score=54.82 Aligned_cols=136 Identities=17% Similarity=0.237 Sum_probs=80.1
Q ss_pred HHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC------
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ------ 293 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq------ 293 (532)
+.++.||++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|+++||+||||+ |....+.
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 256 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVL 256 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHHH
Confidence 4589999999999998 341100 011110000011 468999999999999999999995 3322110
Q ss_pred -----CC------CCC-CC--C-CCC------------CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC
Q 009560 294 -----NG------MEH-SA--S-RDG------------TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA 346 (532)
Q Consensus 294 -----n~------~~~-sg--~-~~g------------~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~ 346 (532)
+. +.. +. . ... ...+.+++.++..++..+... .|+ -..+- +|+.++-
T Consensus 257 ~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~g-vDGfR-~D~a~~~--- 330 (585)
T 1wzl_A 257 QKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQG-IDGWR-LDVANEV--- 330 (585)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTT-CCEEE-ETTGGGS---
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-hCC-CeEEE-EeccccC---
Confidence 00 000 00 0 000 122345677778888877777 664 23333 6666654
Q ss_pred CCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 347 TVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 347 ~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .++.+++.++|++..|+.+++-+
T Consensus 331 --~----~~f~~~~~~~v~~~~p~~~~igE 354 (585)
T 1wzl_A 331 --D----HAFWREFRRLVKSLNPDALIVGE 354 (585)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHHHCCCEEEEEE
Confidence 1 45778888889999998765443
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.16 Score=54.10 Aligned_cols=139 Identities=16% Similarity=0.236 Sum_probs=81.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCC-----CCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC----
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAP-----FIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ---- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~-----~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq---- 293 (532)
.+.++.|+++|+|+|=|.=-+. ........+ .++ +..+.|+++|+.|+++||+||||+ |..+.+.
T Consensus 59 ~~~LdyL~~LGv~~I~L~Pi~~-~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~ 137 (488)
T 2wc7_A 59 MEDLDYIQNLGINAIYFTPIFQ-SASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHD 137 (488)
T ss_dssp HHTHHHHHHHTCCEEEESCCEE-ECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCCC-CCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHHH
Confidence 3568899999999998842111 100000111 011 468999999999999999999997 5433210
Q ss_pred -------CCC------CC------CCC-CC-----------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC
Q 009560 294 -------NGM------EH------SAS-RD-----------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342 (532)
Q Consensus 294 -------n~~------~~------sg~-~~-----------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE 342 (532)
+.+ .. .+. .. ....|.+++.++...+..++.. .|+ -..+- ++..++
T Consensus 138 ~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~g-vDGfR-~D~~~~ 214 (488)
T 2wc7_A 138 VLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFG-IDGWR-LDVPFE 214 (488)
T ss_dssp HHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHT-CCEEE-ESSGGG
T ss_pred HHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHH-HCC-CCEEE-Eecccc
Confidence 000 00 000 00 0123446777888888888777 453 23333 666665
Q ss_pred CCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 343 PSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 343 P~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
.. .+ .+.+++.+++++..|+.++ ++..|
T Consensus 215 i~-----~~---~~~~~~~~~~~~~~p~~~~-vgE~~ 242 (488)
T 2wc7_A 215 IK-----TP---GFWQEFRDRTKAINPEAYI-VGEVW 242 (488)
T ss_dssp CC-----CT---THHHHHHHHHHHHCTTCEE-EECCC
T ss_pred cC-----hH---HHHHHHHHHHHhhCCCeEE-EEEec
Confidence 42 12 2556777888888887665 44444
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=95.19 E-value=0.62 Score=49.19 Aligned_cols=207 Identities=9% Similarity=0.033 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCC-CCCC-CCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH---HhCCC----CcE
Q 009560 264 SLEALDNALSWAEAYNIKCIIDLHAA-PGSQ-NGMEHSASRDGTTDWPASDYISQTLDVIDFLAS---RYAKH----PAL 334 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsq-n~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~---ry~~~----p~v 334 (532)
..+.+++.+.++.++|=-|-+..|-. |... +-++.++....... .....-+.+...++.|++ .+++. ..|
T Consensus 90 ~~~~i~~~i~~~~~rGGIvTlsWH~~np~tg~~~~dts~~~~~~il-pGg~~~~~y~~~l~~iA~~l~~Lk~~~g~gvPV 168 (475)
T 3tp4_A 90 NIALFADYIRKADAIGGVNTVGAGVENFVTGGSFYDTSGDTLRAVL-PGGSHHAELVAYLDDIAELADASRRDDGTLIPI 168 (475)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEESGGGSTTSTTCC---CHHHHHS-TTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCE
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCcccCCHHHHHHhc-CCCchhHHHHHHHHHHHHHHHhhccccCCCceE
Confidence 46678888889999999999999963 1100 00111100000000 000122345555665554 56542 123
Q ss_pred EEEEeccCCCCCC-------CCcccHHHHHHHHHHHHHh-hCCCcEEEE-eCCCC-CCCchhhhhccCCCC-cEEEEeee
Q 009560 335 LGIELLNEPSAAT-------VPLDILVPYYKQGYQIVRK-YSPTAYVIV-CQRIG-NADPLELYQANIGLH-NIVVDLHY 403 (532)
Q Consensus 335 ~g~EL~NEP~~~~-------~~~~~l~~~~~~~~~aIR~-~~~~~~Viv-~~~~~-~~~~~~~~~~~~~~~-nvv~s~H~ 403 (532)
+ |-+.-|..+.- .+++.+.++++.+++++|+ .+-+.++.+ ++.-. +.+...+...-++++ =.++.+-.
T Consensus 169 l-~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YPGDdyVDiVG~D~ 247 (475)
T 3tp4_A 169 V-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 247 (475)
T ss_dssp E-EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred E-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCCCCCeEEEEEEec
Confidence 3 77999988642 1357799999999999996 454555554 33211 112234444434443 45888888
Q ss_pred cccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC--CCCCHHHHHHHHHHHHHHHHhC----CC
Q 009560 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV--TSGTQKDYQDFGSAQLEVYNAA----SF 477 (532)
Q Consensus 404 Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~--~~a~~~~~~~~~~~ql~~~~~~----~~ 477 (532)
|..... ... .+.+ ......+..+++..++|+.|+|||..... .+.+ ...|+...+..+.+. .+
T Consensus 248 Y~~~~~------~~f-~~~~-~~~l~~l~~~A~~~gKpiaItE~G~~~~~~~~G~~---da~W~t~~l~~i~~~P~v~~i 316 (475)
T 3tp4_A 248 YDSTGS------DAF-LAGL-VADLRMIAEIADEKGKVSAFTRFGVSGGVGTNGSS---PAQWFTKVLAAIKADPVASRN 316 (475)
T ss_dssp EESSCC------HHH-HHHH-HHHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCC---CTTHHHHHHHHHHTCTTTTCC
T ss_pred cCCCCc------hhH-HHHH-HHHHHHHHHHHhhCCCcEEEEeeccCCCcccCCCc---hHHHHHHHHHHHHhCccccee
Confidence 865211 111 1111 12223455566667899999999987421 1111 135777777777654 45
Q ss_pred cEE-EEc
Q 009560 478 GWA-YWT 483 (532)
Q Consensus 478 Gw~-yW~ 483 (532)
.|+ +|.
T Consensus 317 aYvl~Wr 323 (475)
T 3tp4_A 317 AYMETGE 323 (475)
T ss_dssp CEEEECC
T ss_pred EEEEEEc
Confidence 555 465
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=95.10 E-value=0.33 Score=54.17 Aligned_cols=138 Identities=11% Similarity=0.172 Sum_probs=80.0
Q ss_pred HHHHHHHHcCCCEEEEccccccccC-------------CCCCCCC------------Cc--ChHHHHHHHHHHHHHcCCE
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIAFD-------------PDPPAPF------------IG--GSLEALDNALSWAEAYNIK 281 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~~~-------------~~~~~~~------------~~--~~l~~Ld~~v~~a~k~Gi~ 281 (532)
+.++.|+++|+|+|=|+=-+..... ...+.|| ++ +..+.|+++|+.|+++||+
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 4589999999999998432211000 0011112 11 4689999999999999999
Q ss_pred EEEEcCCCCCCCCCC----------CCCCCCC----C--------CCCCCC--hhhHHHHHHHHHHHHHHhCCCCcEEEE
Q 009560 282 CIIDLHAAPGSQNGM----------EHSASRD----G--------TTDWPA--SDYISQTLDVIDFLASRYAKHPALLGI 337 (532)
Q Consensus 282 VILDlH~~pGsqn~~----------~~sg~~~----g--------~~~W~~--~~~~~~~~~~w~~la~ry~~~p~v~g~ 337 (532)
||||+---.+....+ ...|... . ...|.+ ++.++...+..+...+ |+ -..+- +
T Consensus 337 VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~-~G-VDGfR-l 413 (695)
T 3zss_A 337 IALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMD-HG-VRIFR-V 413 (695)
T ss_dssp EEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHH-TT-CCEEE-E
T ss_pred EEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHH-hC-CCEEE-e
Confidence 999963211111110 0001000 0 023445 6777777777777776 42 23322 4
Q ss_pred EeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 338 ELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 338 EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
+..++ .-.++.+.+.++||+..|+.++ ++..|
T Consensus 414 D~a~~---------~~~~f~~~~~~~v~~~~pd~~~-vgE~~ 445 (695)
T 3zss_A 414 DNPHT---------KPVAFWERVIADINGTDPDVIF-LAEAF 445 (695)
T ss_dssp SSGGG---------SCHHHHHHHHHHHHHHCTTCEE-EECCC
T ss_pred cCcch---------hhHHHHHHHHHHHHhhCCCceE-EEeec
Confidence 44332 2356778888999999998765 55555
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=95.04 E-value=0.28 Score=56.22 Aligned_cols=103 Identities=14% Similarity=0.227 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC---------CCCCChhhHHHHHHHHHHHHHH
Q 009560 265 LEALDNALSWAEAYNIKCIIDL---HAAPGS-----QNGMEHSASRDGT---------TDWPASDYISQTLDVIDFLASR 327 (532)
Q Consensus 265 l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs-----qn~~~~sg~~~g~---------~~W~~~~~~~~~~~~w~~la~r 327 (532)
++.|+++|+.|+++||+||||+ |..+++ ...+-+....+|. ....++..++..++.++..+++
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e 448 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE 448 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999996 555431 1111110000111 1123467788888888888888
Q ss_pred hCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 328 YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 328 y~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
|+= ..+- |+++-. .-..+.+.++.++|+.+|+.+ +++..|
T Consensus 449 ~gV-DGFR-fD~a~~---------~~~~~~~~~~~~~~~~~P~~~-ligE~W 488 (877)
T 3faw_A 449 FKV-DGFR-FDMMGD---------HDAAAIELAYKEAKAINPNMI-MIGEGW 488 (877)
T ss_dssp HCC-CEEE-ETTGGG---------SBHHHHHHHHHHHHHHCTTCE-EEECCC
T ss_pred cCC-cEEE-EecCCc---------CCHHHHHHHHHHHHhhCCCcE-EEEccc
Confidence 852 2222 555421 123456788888999999765 455545
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=94.99 E-value=0.49 Score=52.97 Aligned_cols=147 Identities=14% Similarity=0.180 Sum_probs=83.1
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccc-----cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC--C
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIA-----FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ--N 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~-----~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq--n 294 (532)
++-++.|+++|+|+|-| |+..... .++......++ +..+.|+++|+.|.++||+||||+ |..+... .
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~~ 346 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAWALG 346 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTTT
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCccchhh
Confidence 44458999999999998 4422110 11100000011 468999999999999999999996 3322110 0
Q ss_pred CCC------CCCCCC-CCCCC-------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEecc---------C-----CCCC
Q 009560 295 GME------HSASRD-GTTDW-------PASDYISQTLDVIDFLASRYAKHPALLGIELLN---------E-----PSAA 346 (532)
Q Consensus 295 ~~~------~sg~~~-g~~~W-------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~N---------E-----P~~~ 346 (532)
.++ +..... ....| .+++.++..++......++|.= ..+- +|.+- + |...
T Consensus 347 ~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gv-DGfR-~Dav~~mly~d~~r~~g~w~~n~~ 424 (722)
T 3k1d_A 347 RFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHI-DGLR-VDAVASMLYLDYSRPEGGWTPNVH 424 (722)
T ss_dssp TTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCC-CEEE-ECCTHHHHBCCCCCCSSCCSCCCS
T ss_pred cCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCC-CEEE-EcchhhhhhccccccccccccccC
Confidence 011 100000 11233 3567788888888888887642 1111 33210 0 1110
Q ss_pred C-CCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 347 T-VPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 347 ~-~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .....-.++.+.+.++|++..|+.++|-+
T Consensus 425 gg~~n~~~~~fl~~l~~~v~~~~P~~~~iaE 455 (722)
T 3k1d_A 425 GGRENLEAVQFLQEMNATAHKVAPGIVTIAE 455 (722)
T ss_dssp SCSBCHHHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred CCccChHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 0 01113467899999999999999877665
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.27 Score=56.68 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=81.4
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccC------------CC---------CCCCCCcC-hHHHHHHHHHHHHHcCCEEEEE
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFD------------PD---------PPAPFIGG-SLEALDNALSWAEAYNIKCIID 285 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~------------~~---------~~~~~~~~-~l~~Ld~~v~~a~k~Gi~VILD 285 (532)
+-++.|+++|+|+|=| ||.-....+ +. ...| .++ ..+.|+++|+.|+++||+||||
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp-~Gt~~~~dfk~LV~~aH~~GI~VILD 551 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTP-EGTARITELKQLIQSLHQQRIGVNMD 551 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCS-STTHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCC-CCCccHHHHHHHHHHHHHcCCEEEEE
Confidence 3589999999999998 442111011 00 0011 111 2799999999999999999999
Q ss_pred c---CCCCCCC-------CCCCC----CCCCCC------CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 286 L---HAAPGSQ-------NGMEH----SASRDG------TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 286 l---H~~pGsq-------n~~~~----sg~~~g------~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+ |..++.. +.+-+ .|.... ...+.+++.++..++.+++.+++|.= ..+- ++++..-
T Consensus 552 vV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gV-DGfR-~Da~~~~-- 627 (921)
T 2wan_A 552 VVYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHV-DGFR-FDLMALL-- 627 (921)
T ss_dssp ECTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCC-CEEE-ETTGGGG--
T ss_pred EccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcCC-CEEE-ecccccc--
Confidence 6 5544321 11110 010000 12234567788888888888887742 2332 5555431
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+ .++.+++.+++++.+|+.++|-+
T Consensus 628 ---~----~~~~~~~~~~l~~~~p~~~ligE 651 (921)
T 2wan_A 628 ---G----KDTMAKISNELHAINPGIVLYGE 651 (921)
T ss_dssp ---C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ---C----HHHHHHHHHHHHHhCCceEEEEe
Confidence 1 34567778888999998765543
|
| >3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.84 Score=40.40 Aligned_cols=105 Identities=23% Similarity=0.378 Sum_probs=77.9
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETF 145 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F 145 (532)
...+|-+.+.|.|+-....| .|.+-|+.-+.--.+++....-+.+.|+. ..|.|++.+..|. |.++++. ...+.|
T Consensus 31 ~~~~LYcr~~g~~LqI~~dG--~V~Gt~~~~~~~s~lei~sv~~G~V~L~g~~sg~yL~mn~~G~-l~Gs~~~-t~ecsf 106 (142)
T 3p6j_A 31 GEVLLKSTETGQYLRINPDG--TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDR-SDTHIQ 106 (142)
T ss_dssp TCEEEEETTTCCEEEECTTS--BEEEECCTTCGGGCEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEECCT-TCGGGC
T ss_pred cEEEEEEeCCCEEEEECCCC--CEeeecCCCCCceEEEEEEccCCEEEEEEecCCEEEeECCCCC-EeecccC-CCCceE
Confidence 45667776679999887654 55555555555667777777788999998 5899999998885 8887764 444666
Q ss_pred -EEEEcCCCcEEEEe-cCCceEEeccCceEEe
Q 009560 146 -EIERNNDSRVHIKL-KSGTYLQATLGNQLTS 175 (532)
Q Consensus 146 -~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~a 175 (532)
+++-.+...|.|+. ..|.||..+..|.+.+
T Consensus 107 lEi~~en~y~v~i~g~~sg~YLamnk~Grlyg 138 (142)
T 3p6j_A 107 FQISPEGNGEVLLKSTETGQYLRINPDGTVDG 138 (142)
T ss_dssp EEEEECSTTCEEEEETTTCCEEEECTTSBEEE
T ss_pred EEEEeecCcEEEEEEecCCEEEEECCCcCCcc
Confidence 55554456788887 7799999999888765
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=94.74 E-value=0.3 Score=53.96 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=82.0
Q ss_pred HHHHHHHHcCCCEEEE-cccccc------ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCC---
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI------AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH---AAPGSQ--- 293 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~------~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsq--- 293 (532)
+.++.|+++|+|+|=| |+.-.. ..++......++ +.++.|+++|+.|+++||+||+|+- ....+.
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~V~NH~s~~~~wf~ 189 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHTADDHAWAQ 189 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEEETTSHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCCcccchhhHH
Confidence 4579999999999998 442110 011111111122 4699999999999999999999963 211110
Q ss_pred ----------C------------CC--------CC--CCC-----CCC------------CCCCCChhhHHHHHHHHHHH
Q 009560 294 ----------N------------GM--------EH--SAS-----RDG------------TTDWPASDYISQTLDVIDFL 324 (532)
Q Consensus 294 ----------n------------~~--------~~--sg~-----~~g------------~~~W~~~~~~~~~~~~w~~l 324 (532)
+ .+ .. .+. ..+ ...|.+++.++.++++.++.
T Consensus 190 ~~~~~~~~y~d~y~~~~~~~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~~pdLN~~np~V~~~i~~~~~~w 269 (644)
T 3czg_A 190 AARAGDARYLDYYHHFADRTVPDRYEATLGQVFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRL 269 (644)
T ss_dssp HHHTTCHHHHTTBCEESSSHHHHHHHHHCCCC------CCEEEETTTTEEEECSSSTTEEEBCTTSHHHHHHHHHHHHHH
T ss_pred HHhcCCCcccCceecCCCCCCCcchhhcccccCCCCCCCCccccCCCCceEecccccCCCcCCCCCHHHHHHHHHHHHHH
Confidence 0 00 00 000 000 12355677788888888877
Q ss_pred HHHhCCCCcEEEEEeccCC----CCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 325 ASRYAKHPALLGIELLNEP----SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 325 a~ry~~~p~v~g~EL~NEP----~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
.+ ++ -..+ =++....- .......+...++.+.+.+++++..|+.++|-+
T Consensus 270 l~-~G-vDGf-RlDa~~~i~~~~~~~~~n~p~~~~~l~~~r~~~~~~~p~~~ligE 322 (644)
T 3czg_A 270 AN-LG-VEAF-RLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIVAPAVVMKAE 322 (644)
T ss_dssp HH-TT-EEEE-EEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HH-cC-CCEE-EEecccccccccCCcccCcHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 74 42 1222 24444422 111122334567888888899999998765544
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=94.52 E-value=0.23 Score=55.37 Aligned_cols=54 Identities=17% Similarity=0.365 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.|+++|+|+|=| ||.- .+. ...|+ + +..+.|+++|+.|+++||+||||+
T Consensus 268 ~~kLdyLk~LGvt~IwL~Pi~~----s~~-~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 332 (696)
T 4aee_A 268 MKHIDHLEDLGVETIYLTPIFS----STS-YHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDI 332 (696)
T ss_dssp HTTHHHHHHHTCCEEEECCCEE----ESS-SSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhHHHHHcCCCEEEECCccc----CCC-CCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEec
Confidence 45688999999999988 3311 111 01121 1 469999999999999999999996
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.36 Score=53.20 Aligned_cols=58 Identities=10% Similarity=0.248 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEE-cccccc------ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI------AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~------~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.++.|+++|+|+|=| |+.-.. ..++......++ +.++.|+++|+.|+++||+||+|+
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 442100 111111111112 479999999999999999999996
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=94.34 E-value=0.54 Score=51.64 Aligned_cols=146 Identities=12% Similarity=0.176 Sum_probs=82.8
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNGM 296 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~~ 296 (532)
++-++.|+++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+ |..+.+ .++
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~-~~~ 237 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FAL 237 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCST-TSS
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCcc-chh
Confidence 33459999999999998 552110 011110000011 468999999999999999999995 442221 111
Q ss_pred C---------CCCCCCC-C-------CCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC------CCCC-------
Q 009560 297 E---------HSASRDG-T-------TDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE------PSAA------- 346 (532)
Q Consensus 297 ~---------~sg~~~g-~-------~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE------P~~~------- 346 (532)
. +...+.+ . ..+.+++.++..++..++..++|.= ..+- ++.+.. +...
T Consensus 238 ~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gv-DGfR-~D~~~~~~~~d~~~~~g~~~~~~ 315 (617)
T 1m7x_A 238 AEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGI-DALR-VDAVASMIYRDYSRKEGEWIPNE 315 (617)
T ss_dssp TTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCC-CEEE-ECCSHHHHCC-------------
T ss_pred hhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCc-CEEE-Ecchhhhhhcccccccccccccc
Confidence 1 0000001 1 1344567888888888888888742 1221 333211 0000
Q ss_pred --CCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 347 --TVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 347 --~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
......-.++.+++.++|++..|+.++|-+
T Consensus 316 ~~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE 347 (617)
T 1m7x_A 316 FGGRENLEAIEFLRNTNRILGEQVSGAVTMAE 347 (617)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred ccccCCchHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 001123467889999999999998776654
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=94.31 E-value=0.44 Score=53.67 Aligned_cols=144 Identities=13% Similarity=0.221 Sum_probs=82.2
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCC---CCCCcChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPP---APFIGGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQN- 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~---~~~~~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn- 294 (532)
++-++.|+++|+|+|=| ||.-.. ..++... .+ .-+..+.|+++|+.|.++||+||||+ |.......
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g 283 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSS-RSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDG 283 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTS
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCC-CCCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccc
Confidence 34589999999999998 331100 1111100 01 01468999999999999999999996 33322111
Q ss_pred --CCC----------CCCCCCC--------CCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEecc----CCCC-----
Q 009560 295 --GME----------HSASRDG--------TTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN----EPSA----- 345 (532)
Q Consensus 295 --~~~----------~sg~~~g--------~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~N----EP~~----- 345 (532)
+++ +.+. .+ ...|.+++.++..++..++.+++|.= ..+- ++.+. ++.+
T Consensus 284 ~~~fd~~~~~~~~yf~~~~-~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gv-DGfR-~Dav~~m~~~~~g~~~~f 360 (755)
T 3aml_A 284 LNGYDVGQNTHESYFHTGD-RGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMF-DGFR-FDGVTSMLYHHHGINKGF 360 (755)
T ss_dssp GGGGCSSCCGGGSSBCCGG-GGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCC-CEEE-ETTHHHHHBTTTTTTCCC
T ss_pred hhccccCCCCCcceeecCC-CCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCC-CEEE-ecchhhhhhcccCccccc
Confidence 111 1000 01 11344577788888888888887642 1222 44432 1100
Q ss_pred ---------CCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 346 ---------ATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 346 ---------~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
...+. .-..|.+.+.+++++..|+.++|-+
T Consensus 361 ~~~~~~~~~~~~~~-~ai~fl~~~~~~v~~~~p~~~lIaE 399 (755)
T 3aml_A 361 TGNYKEYFSLDTDV-DAIVYMMLANHLMHKLLPEATIVAE 399 (755)
T ss_dssp CSCGGGTSSTTBCH-HHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ccccccccccccch-hHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 00011 1236778888889999998876654
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=94.19 E-value=0.44 Score=53.35 Aligned_cols=139 Identities=12% Similarity=0.182 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCCEEEE-cccccc-------------ccCCC----CCCCCC--c----ChHHHHHHHHHHHHHcCCEEEE
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI-------------AFDPD----PPAPFI--G----GSLEALDNALSWAEAYNIKCII 284 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~-------------~~~~~----~~~~~~--~----~~l~~Ld~~v~~a~k~Gi~VIL 284 (532)
+-++.|+++|+|+|=| ||.-.. ..++. +...|- + +.++.|+++|+.|+++||+|||
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 3699999999999998 542100 00110 000111 1 1379999999999999999999
Q ss_pred Ec---CCCCCCC-------CCCC----CCCCCC------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCC
Q 009560 285 DL---HAAPGSQ-------NGME----HSASRD------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 285 Dl---H~~pGsq-------n~~~----~sg~~~------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~ 344 (532)
|+ |..+... ..+- ..|... ....|.+++.++..++..+..+++|+= ..+- +|++..-
T Consensus 335 DvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gV-DGfR-~D~~~~~- 411 (718)
T 2e8y_A 335 DVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNV-DGFR-FDLLGIL- 411 (718)
T ss_dssp EECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCC-CEEE-ETTGGGS-
T ss_pred EEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHhCC-CEEE-EeccccC-
Confidence 96 5433220 0110 001000 012344677888888888888887742 3333 5665432
Q ss_pred CCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 345 AATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 345 ~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
+ .++.+++.+++++.+|+.++| +..|
T Consensus 412 ----~----~~~~~~~~~~~~~~~p~~~li-gE~w 437 (718)
T 2e8y_A 412 ----D----IDTVLYMKEKATKAKPGILLF-GEGW 437 (718)
T ss_dssp ----B----HHHHHHHHHHHHHHSTTCEEE-ECCC
T ss_pred ----C----HHHHHHHHHHHHHhCCCeEEE-Eeec
Confidence 2 245667778888889876654 4434
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=94.14 E-value=0.074 Score=57.10 Aligned_cols=54 Identities=26% Similarity=0.489 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+-++.||++|+|+|=| ||.- .+.....|+ + +.++.|+++|+.|.++||+||||+
T Consensus 36 ~kLdYLk~LGvt~I~L~Pi~~----~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 36 SRLDYLEKLGIDAIWLSPVYQ----SPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp TTHHHHHHHTCSEEEECCCEE----CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHCCCCEEEeCCCcC----CCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4478999999999998 4421 111111111 1 479999999999999999999997
|
| >3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.13 E-value=1.4 Score=38.93 Aligned_cols=98 Identities=21% Similarity=0.359 Sum_probs=72.5
Q ss_pred cCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceE-EEEEcCC
Q 009560 75 TLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETF-EIERNND 152 (532)
Q Consensus 75 ~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F-~~v~~~~ 152 (532)
.+|.|+-.-..| .|.+.|+.-+.--.+++.-++.+.+.+|. ..|.|++.+..|. |.+++.. ..-+.| +++-.+.
T Consensus 17 ~~g~~LqI~~dG--~V~Gt~~~~~~~s~l~~~sv~~G~V~I~gv~sg~yL~m~~~G~-v~Gs~~~-~~ec~flE~~~e~~ 92 (143)
T 3snv_A 17 KGGQYLRINPDG--TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDR-SDTHIQFQISPEGN 92 (143)
T ss_dssp --CCEEEECTTS--BEEEESCTTCTTSEEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEECCT-TCTTSEEEEEECST
T ss_pred cCCEEEEECCCC--CEeeecCCCCCceEEEEEeccCCeEEEEEEcccEEEeECCCCC-EeecccC-CCcceEEEEEecCC
Confidence 567888776654 55666666566667777777788999998 7899999998885 8888764 445666 4555435
Q ss_pred CcEEEEe-cCCceEEeccCceEEeC
Q 009560 153 SRVHIKL-KSGTYLQATLGNQLTSD 176 (532)
Q Consensus 153 ~~v~i~a-~nG~~l~a~~~~~v~ad 176 (532)
+.|.|+. ..|.||+.+..|.+...
T Consensus 93 g~v~i~~~~sg~Ylamnk~Grl~Gs 117 (143)
T 3snv_A 93 GEVLLKSTETGQYLRINPDGTVDGT 117 (143)
T ss_dssp TEEEEEETTTCCEEEECTTSBEEEE
T ss_pred cEEEEEEeeCCEEEEEcCCCcCcCc
Confidence 6788888 77999999999987554
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=94.07 E-value=0.4 Score=51.60 Aligned_cols=105 Identities=14% Similarity=0.154 Sum_probs=77.9
Q ss_pred ccceEEEEEecCCeEEEEecCC---CceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeC----CCceEEEee
Q 009560 65 DGTQVQIKSVTLEKYVCAESGG---GTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDG----EGCVVSATA 136 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg---~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~----~g~~~~a~~ 136 (532)
+++..+|+++..||.|-...++ |+.|+--.-.-+.-.+|++...+++.+.|+. ..|+.+.+.+ .|+.|+--.
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~ 438 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNGSLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQYT 438 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCCCGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEEEC
T ss_pred CCccEEEEECCCCceEEecCCCCCCCcEEEEccCCCCcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEec
Confidence 5678999999999999876643 3455543333456778888888899999998 6788887653 344566555
Q ss_pred cCCCCCceEEEEEcCCCcEEEEe-cCCceEEecc
Q 009560 137 KSPSTPETFEIERNNDSRVHIKL-KSGTYLQATL 169 (532)
Q Consensus 137 ~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~ 169 (532)
-..+..++|.++..+++.++|+. ..|+.|.+..
T Consensus 439 c~g~~nQ~W~~~~~g~g~y~i~~~~sg~cLdv~~ 472 (526)
T 3vsf_A 439 SNGGYNQHWKFTDIGDGYYKISSRHCGKLIDVRK 472 (526)
T ss_dssp CCCCGGGCEEEEEEETTEEEEEESSSCCEEEEGG
T ss_pred CCCCcccEEEEEECCCCeEEEEECCCCCEEEeCC
Confidence 55668999999998677788877 6789888754
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=93.53 E-value=2.2 Score=44.05 Aligned_cols=130 Identities=9% Similarity=0.050 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHH---hCCC----CcEEEEEeccCCCCC-------CCCcccHHHHHHHHHHHHH-hhCCCcEEEEeCC
Q 009560 314 ISQTLDVIDFLASR---YAKH----PALLGIELLNEPSAA-------TVPLDILVPYYKQGYQIVR-KYSPTAYVIVCQR 378 (532)
Q Consensus 314 ~~~~~~~w~~la~r---y~~~----p~v~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR-~~~~~~~Viv~~~ 378 (532)
-+.+.+.++.+|+. +++. ..|+ |-+.-|..+. ..+++.++++++.+++++| ..+-+.++.+=..
T Consensus 141 ~~~~~~~id~iA~~l~~l~~~~G~~vPV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp 219 (386)
T 1odz_A 141 NPVLNGYLDQVAEWANNLKDEQGRLIPVI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSP 219 (386)
T ss_dssp HHHHHHHHHHHHHHHHTCBCTTSCBCCEE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhhhccCCCceEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeC
Confidence 33566666666665 4432 1333 7899998863 1247889999999999999 5566666655222
Q ss_pred CCC--CCchhhhhccCCCC-cEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCccc
Q 009560 379 IGN--ADPLELYQANIGLH-NIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEW 451 (532)
Q Consensus 379 ~~~--~~~~~~~~~~~~~~-nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~ 451 (532)
... .+...+...-++++ =.++.+-.|...... .. -.+.+. .....+..+++..++|+.|+|+|...
T Consensus 220 ~~~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~~-----~~-f~~~~~-~~l~~~~~~A~~~~Kpial~E~G~~~ 288 (386)
T 1odz_A 220 NNFWDVTEANYLERYPGDEWVDVLGFDTYGPVADN-----AD-WFRNVV-ANAALVARMAEARGKIPVISGIGIRA 288 (386)
T ss_dssp BCCSSCCHHHHHSSCCCTTTCSEECCEEEECSSSC-----HH-HHHHHH-HHHHHHHHHHHHHTCEECBCEEEECH
T ss_pred CCCCCCCccchhhcCCCCCeEEEEEEeccCCCCCC-----cc-HHHHHH-HHHHHHHHHhhcCCCeEEEEeccCCC
Confidence 111 12234444434444 468888888752211 01 011111 11233445565678999999999854
|
| >3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.52 E-value=1.5 Score=38.72 Aligned_cols=89 Identities=24% Similarity=0.360 Sum_probs=60.9
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETF 145 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F 145 (532)
..|.|+++..|.|||...-| .|.+-+..-..---++++..+.+.+.+++ ..|.||+.+..|- +-+++.. .+-+.|
T Consensus 51 G~V~I~gv~sg~yL~m~~~G--~v~Gs~~~~~ec~flE~~~e~~g~v~i~~~~sg~Ylamnk~Gr-l~Gs~~~-s~eC~F 126 (143)
T 3snv_A 51 GEVLLKSTETGQYLRINPDG--TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDR-SDTHIQ 126 (143)
T ss_dssp TEEEEEETTTTEEEEECTTS--BEEEECCTTCTTSEEEEEECSTTEEEEEETTTCCEEEECTTSB-EEEESCT-TCTTCC
T ss_pred CeEEEEEEcccEEEeECCCC--CEeecccCCCcceEEEEEecCCcEEEEEEeeCCEEEEEcCCCc-CcCcCCC-CCCeeE
Confidence 48999999999999998876 45554443233222345556678899998 7899999999885 7766654 555555
Q ss_pred -EEEEcCCCcEEEEe
Q 009560 146 -EIERNNDSRVHIKL 159 (532)
Q Consensus 146 -~~v~~~~~~v~i~a 159 (532)
+.+-..++.+-+|.
T Consensus 127 ~E~~~enn~~~~~~~ 141 (143)
T 3snv_A 127 FQISPEGNGEVLLKS 141 (143)
T ss_dssp EEEEECSSSCEEEEE
T ss_pred EEEEEeCCceEEEec
Confidence 33333356676664
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=93.49 E-value=0.067 Score=56.32 Aligned_cols=58 Identities=17% Similarity=0.445 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCEEEEc-cc-----------cccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIP-VG-----------WWIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-v~-----------ww~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++..+.|+++|+++|=|| +. ||...+|... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy-~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCc-eeCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 445567999999999994 31 2333333221 1122 478999999999999999999995
|
| >3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A | Back alignment and structure |
|---|
Probab=93.40 E-value=2 Score=37.95 Aligned_cols=97 Identities=26% Similarity=0.444 Sum_probs=71.0
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCce-E
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPET-F 145 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~-F 145 (532)
..+|-+.+.|.|+-....| .+.+-|..-+..-.+++.-..-+.+.|+. ..|.|++.+..|. |.+++.. .+-+. +
T Consensus 42 ~r~LYcr~~g~hLqI~~dG--~V~Gt~~~~s~~s~Lei~sv~~GvV~I~Gv~tg~yL~Mn~dG~-l~Gs~~~-s~ec~fl 117 (142)
T 3p6i_A 42 EVLLKSTETGQYLRINPDG--TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDR-SDTHIQF 117 (142)
T ss_dssp CEEEEETTTCCEEEECTTS--BEEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSB-EEEECCT-TCTTCCE
T ss_pred eEEEEEcCCCEEEEECCCC--cCcCcCCCCCCceEEEEEeccCCEEEEEEecCceEEeECCCCC-CccccCC-CCCeEEE
Confidence 4567775559999887655 45555555555556776667778999998 6799999998885 8887764 33455 5
Q ss_pred EEEEcCCCcEEEEe-cCCceEEec
Q 009560 146 EIERNNDSRVHIKL-KSGTYLQAT 168 (532)
Q Consensus 146 ~~v~~~~~~v~i~a-~nG~~l~a~ 168 (532)
++.--+.+.|.||. ..|.||+..
T Consensus 118 Ei~~v~~G~V~Ikgv~Sg~YLaMn 141 (142)
T 3p6i_A 118 QISPEGNGEVLLKSTETGQYLRIN 141 (142)
T ss_dssp EEEECSSSCEEEEETTTTEEEEEC
T ss_pred EEEEEeCCEEEEEEEecceEEEEC
Confidence 66665567899988 889999765
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=92.88 E-value=0.14 Score=53.83 Aligned_cols=59 Identities=25% Similarity=0.310 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=| |+.-.. ..++......++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 90 (441)
T 1lwj_A 26 KNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (441)
T ss_dssp HHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35578999999999998 332100 011110000011 469999999999999999999996
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=92.61 E-value=1.3 Score=51.49 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC---------CCCCChhhHHHHHHHHHHHHHH
Q 009560 265 LEALDNALSWAEAYNIKCIIDL---HAAPGS-----QNGMEHSASRDGT---------TDWPASDYISQTLDVIDFLASR 327 (532)
Q Consensus 265 l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs-----qn~~~~sg~~~g~---------~~W~~~~~~~~~~~~w~~la~r 327 (532)
.+.|+++|+.|+++||+||||+ |..+++ ...+-+....++. ....++..++.+++..+..+++
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~e 640 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 640 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999996 433321 0011100000111 1122456777788888888888
Q ss_pred hCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 328 YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 328 y~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
|+= ..+- ++++.+. + .++++.+..++++.+|+.++|-+
T Consensus 641 ~gv-DGfR-~D~~~~~-----~----~~~~~~~~~~~~~~~p~~~ligE 678 (1014)
T 2ya1_A 641 YKV-DGFR-FDMMGDH-----D----AASIEEAYKAARALNPNLIMLGE 678 (1014)
T ss_dssp HCC-CEEE-ETTGGGS-----B----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCc-eEEE-EeCCCCC-----C----HHHHHHHHHHHHHhCCCeEEEEe
Confidence 752 2333 5655321 1 23456777888999998765543
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=92.57 E-value=0.79 Score=50.72 Aligned_cols=147 Identities=12% Similarity=0.151 Sum_probs=83.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCC--------Cc--ChHHHHHHHHHHHHHcCCEEEEEcC---CCCCC--
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF--------IG--GSLEALDNALSWAEAYNIKCIIDLH---AAPGS-- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~--------~~--~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGs-- 292 (532)
.+.++.|+++|+++|=|+=.+- .........| ++ +.++.++++|+.|+++||+||+|+- ....+
T Consensus 114 ~~~LdyL~~lGv~~v~l~P~~~-~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V~NH~s~~~~w 192 (655)
T 3ucq_A 114 EERLDYLEGLGVKYLHLMPLLR-PREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDLVLNHVAREHAW 192 (655)
T ss_dssp HTTHHHHHHTTCCEEEECCCEE-ECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEEETTSHH
T ss_pred HHhhHHHHHcCCCEEEECCCcC-CCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEeeccccccchHH
Confidence 3557899999999999853221 1000000111 11 4689999999999999999999963 11110
Q ss_pred -------------------------------CCCCCCC--C------C----CC-----------CCCCCCChhhHHHHH
Q 009560 293 -------------------------------QNGMEHS--A------S----RD-----------GTTDWPASDYISQTL 318 (532)
Q Consensus 293 -------------------------------qn~~~~s--g------~----~~-----------g~~~W~~~~~~~~~~ 318 (532)
...+... + . .. ....|.+|+.++..+
T Consensus 193 f~~~~~~~~~~~d~y~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~qpDLn~~np~V~~~i~ 272 (655)
T 3ucq_A 193 AQKARAGDPKYRAYFHLFPDRRGPDAFEATLPEIFPDFAPGNFSWDEEIGEGEGGWVWTTFNSYQWDLNWANPDVFLEFV 272 (655)
T ss_dssp HHHHHTTCHHHHTTBCEESSSHHHHHHHTTCCCSCTTTSCSSEEEETTSSSSSCEEEECSSSTTEEEBCTTSHHHHHHHH
T ss_pred HHHhhcCCCCCcccEEEcCCCCCCccccccCccccccCCCCcccccccccccCCceEeccccCCCCccCCCCHHHHHHHH
Confidence 0000000 0 0 00 012345677888888
Q ss_pred HHHHHHHHHhCCCCcEEEEEec----cCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCC
Q 009560 319 DVIDFLASRYAKHPALLGIELL----NEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRI 379 (532)
Q Consensus 319 ~~w~~la~ry~~~p~v~g~EL~----NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~ 379 (532)
++++++.+ + +-..+- ++.. -++.....+.....++.+.+...+++..|+..+ ++..+
T Consensus 273 ~~l~~w~~-~-GvDGfR-lDa~~~l~k~~g~~~~~~~~~~~~l~~~r~~~~~~~p~~~~-vgE~~ 333 (655)
T 3ucq_A 273 DIILYLAN-R-GVEVFR-LDAIAFIWKRLGTDCQNQPEVHHLTRALRAAARIVAPAVAF-KAEAI 333 (655)
T ss_dssp HHHHHHHT-T-TCCEEE-ETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEE-EECCC
T ss_pred HHHHHHHH-C-CCCEEE-EechhhccccCCCccCCcHHHHHHHHHHHHHHHHhCCCeEE-EEecC
Confidence 88887774 3 222211 2322 222222234456788888888999999998655 44333
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=92.47 E-value=0.41 Score=51.95 Aligned_cols=140 Identities=15% Similarity=0.292 Sum_probs=74.9
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCC-CCCC---C--Cc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPD-PPAP---F--IG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNG 295 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~-~~~~---~--~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~ 295 (532)
.+.++.|+++|+++|=| |+.-. ..... ...+ | ++ +..+.|+++|+.|+++||+||+|+ |..+.+..-
T Consensus 122 ~~~l~~l~~lG~~~v~l~Pi~~~-~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~ 200 (558)
T 3vgf_A 122 IRKLDYLKDLGITAIEIMPIAQF-PGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYM 200 (558)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEC-SSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCG
T ss_pred HHHHHHHHHcCCcEEEECCcccC-CCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCCCCcc
Confidence 35689999999999998 44110 00000 0111 1 11 468999999999999999999998 655432110
Q ss_pred CCCCCC-CCC-CCCC---------CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHH
Q 009560 296 MEHSAS-RDG-TTDW---------PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIV 364 (532)
Q Consensus 296 ~~~sg~-~~g-~~~W---------~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aI 364 (532)
..+... ..+ ...| .+++.++..++......+.|+= ..+- ++..-.-. ......+.+++.+++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gv-DGfR-~D~~~~~~-----~~~~~~f~~~l~~~~ 273 (558)
T 3vgf_A 201 VKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNV-DGFR-LSAVHAII-----DTSPKHILEEIADVV 273 (558)
T ss_dssp GGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCC-CEEE-ESCGGGCC-----CCSSSCHHHHHHHHH
T ss_pred cccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCC-CEEE-Eecccccc-----cccHHHHHHHHHHHH
Confidence 000000 000 0012 2346677777777777776642 1111 33221110 011234566777778
Q ss_pred HhhCCCcEEEEeCC
Q 009560 365 RKYSPTAYVIVCQR 378 (532)
Q Consensus 365 R~~~~~~~Viv~~~ 378 (532)
|+.. .++++..
T Consensus 274 ~~~~---~~~iaE~ 284 (558)
T 3vgf_A 274 HKYN---RIVIAES 284 (558)
T ss_dssp HHTT---CEEEEEC
T ss_pred hhcC---EEEEEec
Confidence 8876 4445433
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=92.47 E-value=0.16 Score=53.38 Aligned_cols=58 Identities=17% Similarity=0.369 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEEc-cc-------cccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIP-VG-------WWIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-v~-------ww~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++-++.|+++|+++|=|+ +. ||...++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y-~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSY-ELQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCccccccccc-ccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 344689999999999983 31 1111222211 1122 479999999999999999999995
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=92.34 E-value=1.8 Score=48.36 Aligned_cols=101 Identities=16% Similarity=0.267 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----CCCCCCCCCCCCC---------CCCCChhhHHHHHHHHHHHHHH
Q 009560 265 LEALDNALSWAEAYNIKCIIDL---HAAPGS-----QNGMEHSASRDGT---------TDWPASDYISQTLDVIDFLASR 327 (532)
Q Consensus 265 l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs-----qn~~~~sg~~~g~---------~~W~~~~~~~~~~~~w~~la~r 327 (532)
.+.|+++|+.|+++||+||||+ |..+++ ...+-+....++. ....++..++..++..+..+++
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e 333 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 333 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999995 333211 0011100000111 1112456677788888888887
Q ss_pred hCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 328 YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 328 y~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
|+= ..+- ++++.+. + .++++.+..++++.+|+.++|-+
T Consensus 334 ~~v-DGfR-~D~~~~~-----~----~~~~~~~~~~~~~~~p~~~ligE 371 (714)
T 2ya0_A 334 YKV-DGFR-FDMMGDH-----D----AASIEEAYKAARALNPNLIMLGE 371 (714)
T ss_dssp HCC-CEEE-ETTGGGS-----B----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred hCc-eEEE-EeCCCCC-----C----HHHHHHHHHHHHHhCCCeEEEec
Confidence 752 2333 5555321 1 23456777888999998765533
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=92.23 E-value=1.2 Score=49.03 Aligned_cols=145 Identities=12% Similarity=0.086 Sum_probs=79.9
Q ss_pred HHHHHHHH-cCCCEEEE-cccccc---ccCCCCCCCCCc--ChHHHHHHHHHHHHHcC--C--EEEEEc---CCCCCCCC
Q 009560 229 EDFNFLYR-HGINTVRI-PVGWWI---AFDPDPPAPFIG--GSLEALDNALSWAEAYN--I--KCIIDL---HAAPGSQN 294 (532)
Q Consensus 229 ~d~~~la~-~G~N~VRI-pv~ww~---~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~G--i--~VILDl---H~~pGsqn 294 (532)
+-++.||+ +|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|+++| | +||||+ |..+....
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~NH~~~~~~~ 274 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFNHTGDSHPW 274 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCSBCCTTSTT
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECcccCCCCcHH
Confidence 45789999 99999998 442100 011110000011 46899999999999999 9 999996 54432110
Q ss_pred CCCCC------C---CCC--------------------C-----CCCCCCh--hhHHHH----HHHHHHHHHH-hCCCCc
Q 009560 295 GMEHS------A---SRD--------------------G-----TTDWPAS--DYISQT----LDVIDFLASR-YAKHPA 333 (532)
Q Consensus 295 ~~~~s------g---~~~--------------------g-----~~~W~~~--~~~~~~----~~~w~~la~r-y~~~p~ 333 (532)
++.. | ..+ | ...|.++ +.++.. ++..++..++ |. -..
T Consensus 275 -f~~~~~f~~~g~y~~~~~py~~~y~~~~~~~~~~~~~g~~~~pdln~~~p~~~Vr~~i~~~~~~~~~~Wl~~~~g-vDG 352 (637)
T 1ji1_A 275 -FDKYNNFSSQGAYESQSSPWYNYYTFYTWPDSYASFLGFNSLPKLNYGNSGSAVRGVIYNNSNSVAKTYLNPPYS-VDG 352 (637)
T ss_dssp -TCTTCCSSSCCTTTCTTCTTGGGBCEEETTTEECEETTEEEEEBBBCCSTTCHHHHHHTTSTTSHHHHHHSTTTC-CCE
T ss_pred -HhhhhccCccccccCCCCccccccccCCCCCCcccccCCCCcccccccCChHHHHHHHHhhhHHHHHHHHhCcCC-CCE
Confidence 0000 0 000 0 1122345 666666 6666666665 43 122
Q ss_pred EEEEEeccCCCCC--CCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 334 LLGIELLNEPSAA--TVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 334 v~g~EL~NEP~~~--~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+- ++....-... ......-.++.+++.++|++..|+.++|-+
T Consensus 353 fR-~Da~~~l~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~ligE 396 (637)
T 1ji1_A 353 WR-LDAAQYVDANGNNGSDVTNHQIWSEFRNAVKGVNSNAAIIGE 396 (637)
T ss_dssp EE-ETTGGGCBSTTCCCSSHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EE-EEchhhhhccCccccccchHHHHHHHHHHHHhhCCCeEEEEE
Confidence 22 4544443100 011223467888899999999998765544
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=92.09 E-value=0.29 Score=52.65 Aligned_cols=137 Identities=13% Similarity=0.068 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccC-----CCC------CCCCC--c--ChHHHHHHHHHHHHHcCCEEEEEc---CC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFD-----PDP------PAPFI--G--GSLEALDNALSWAEAYNIKCIIDL---HA 288 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~-----~~~------~~~~~--~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~ 288 (532)
.+.++.|+++|+++|=| |+. ..... +.+ ....+ + +..+.|+++|+.|+++||+||||+ |.
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~-e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt 118 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPW-RDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHM 118 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-CCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHhcCCCEEEeCCcc-ccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCc
Confidence 46689999999999998 442 00000 100 01112 2 469999999999999999999995 44
Q ss_pred CCCCCC-CCC--------CCCCC------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEecc
Q 009560 289 APGSQN-GME--------HSASR------------------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN 341 (532)
Q Consensus 289 ~pGsqn-~~~--------~sg~~------------------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~N 341 (532)
.+.+.. .|. +..+. .....+.+++.++..++.+++++++|.= ..+ =+|...
T Consensus 119 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~f~~~~~dLn~~np~Vr~~i~~~~~~w~~~~gv-DGf-RlDa~~ 196 (527)
T 1gcy_A 119 NRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGA-GGF-RFDFVR 196 (527)
T ss_dssp CTTCSSCSCCCCSSSSCBGGGSCCCSSSCBTTBSSCCSTTSTTBBCTTSHHHHHHHHHHHHHHHHHSCE-EEE-EESCGG
T ss_pred CCCCCCccccCCCcchhcccccCCCCCcccCcccCccccccCCccccCCHHHHHHHHHHHHHHHHhcCC-CeE-EEeccc
Confidence 433220 010 00000 0011234577888888888888887641 112 134443
Q ss_pred CCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 342 EPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 342 EP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
.- . .++.++..+++| .| . ++++..|.
T Consensus 197 ~i-----~----~~f~~~~~~~~~--~p-~-~~vgE~~~ 222 (527)
T 1gcy_A 197 GY-----A----PERVNSWMTDSA--DN-S-FCVGELWK 222 (527)
T ss_dssp GS-----C----HHHHHHHHHHHC--TT-S-EEEECCCC
T ss_pred cC-----C----HHHHHHHHHHhc--CC-c-eEEEEecC
Confidence 32 1 335556666666 44 3 45665553
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=91.98 E-value=1.7 Score=50.82 Aligned_cols=101 Identities=9% Similarity=0.174 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHc-CCEEEEEc---CCCCCCC----CC--------CCCCCCCCCC---------CCCCChhhHHHHHH
Q 009560 265 LEALDNALSWAEAY-NIKCIIDL---HAAPGSQ----NG--------MEHSASRDGT---------TDWPASDYISQTLD 319 (532)
Q Consensus 265 l~~Ld~~v~~a~k~-Gi~VILDl---H~~pGsq----n~--------~~~sg~~~g~---------~~W~~~~~~~~~~~ 319 (532)
++.|+++|+.|+++ ||+||||+ |..++.. +. +.......+. ..+.++..++..++
T Consensus 581 ~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~dln~~~p~Vr~~i~d 660 (1083)
T 2fhf_A 581 IKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIAD 660 (1083)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSEEBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCCCCCceecCCccCCcCcCCHHHHHHHHH
Confidence 78999999999998 99999996 5433320 00 0000000111 12335677778888
Q ss_pred HHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 320 VIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 320 ~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
..++.+++|+= ..+- +++++.. ...+..++.+++|+.+|+.++|-+
T Consensus 661 ~l~~W~~e~gV-DGfR-~D~a~~~---------~~~~~~~~~~~l~~~~p~~~ligE 706 (1083)
T 2fhf_A 661 SLAVWTTDYKI-DGFR-FDLMLYH---------PKAQILSAWERIKALNPDIYFFGE 706 (1083)
T ss_dssp HHHHHHHHHCC-CEEE-ETTGGGS---------BHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHHhCC-cEEE-EeCcccC---------CHHHHHHHHHHHHHhCCCeEEEEe
Confidence 88888888752 2333 6666432 234567788889999997765433
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=91.96 E-value=0.23 Score=51.51 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCCEEEEc-ccccc---ccCCCCCCCCC-c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRIP-VGWWI---AFDPDPPAPFI-G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIp-v~ww~---~~~~~~~~~~~-~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.++.|+++|+++|=|+ +.-.. ..++......+ + +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984 32110 11121111112 2 468999999999999999999995
|
| >1hcd_A Hisactophilin; actin binding; NMR {Dictyostelium discoideum} SCOP: b.42.5.2 PDB: 1hce_A | Back alignment and structure |
|---|
Probab=91.91 E-value=0.52 Score=38.03 Aligned_cols=72 Identities=22% Similarity=0.416 Sum_probs=54.7
Q ss_pred EEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEecCCceEEeccCceEEeCCCCCCCCCCCCcceee
Q 009560 114 QFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPGWDDNAATFEM 192 (532)
Q Consensus 114 ~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~~W~~~ps~f~~ 192 (532)
+|++.+|.|++|+..- +----.--.--..|.+++. +.+|.||..-|+||+..+..+|...--- .++-|+|-.
T Consensus 5 afk~hhgh~lsae~~~--vkthhghhdhhthfhvenh-g~kvalrth~gkyvsigdhkqvylshh~----hg~hslfhl 76 (118)
T 1hcd_A 5 AFKSHHGHFLSAEGEA--VKTHHGHHDHHTHFHVENH-GGKVALKTHCGKYLSIGDHKQVYLSHHL----HGDHSLFHL 76 (118)
T ss_dssp EEESSTTCEEEEETTE--EEEECSCSSCCCCCEEEEE-TTEEEEESSSSCEEEEEETTEEEEECCC----SSSSSSBEE
T ss_pred hhhhccCeeeeccccc--cccccCcccccceEEeecC-CceEEEEeccCcEEEecCCceEEEEeee----cCcceeEee
Confidence 7899999999998543 4444444456778999999 6799999999999999998887765322 345677764
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=91.88 E-value=0.25 Score=52.28 Aligned_cols=58 Identities=17% Similarity=0.286 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCC----CCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDP----DPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~----~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=| |+.- ..... .....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 46 ~~~LdyL~~lGvt~I~l~Pi~~-~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (478)
T 2guy_A 46 IDKLDYIQGMGFTAIWITPVTA-QLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (478)
T ss_dssp HHTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccc-CCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35578999999999998 4431 11000 0011121 1 469999999999999999999996
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=91.63 E-value=0.87 Score=50.97 Aligned_cols=101 Identities=23% Similarity=0.301 Sum_probs=58.8
Q ss_pred HHHHHHHHcCCCEEEE-cccccc--------------ccCCCCCCCCCc--Ch-------HHHHHHHHHHHHHcCCEEEE
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI--------------AFDPDPPAPFIG--GS-------LEALDNALSWAEAYNIKCII 284 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~--------------~~~~~~~~~~~~--~~-------l~~Ld~~v~~a~k~Gi~VIL 284 (532)
.-++.||++|+|+|=| ||.-.. ..++......++ +. ++.|+++|+.|+++||+|||
T Consensus 206 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~Vil 285 (718)
T 2vr5_A 206 QMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVII 285 (718)
T ss_dssp HHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred hhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEE
Confidence 4699999999999998 442110 011100000011 12 89999999999999999999
Q ss_pred Ec---CCCCCCCCC------------CCCC---CC--C------CCCCCCCChhhHHHHHHHHHHHHHHhC
Q 009560 285 DL---HAAPGSQNG------------MEHS---AS--R------DGTTDWPASDYISQTLDVIDFLASRYA 329 (532)
Q Consensus 285 Dl---H~~pGsqn~------------~~~s---g~--~------~g~~~W~~~~~~~~~~~~w~~la~ry~ 329 (532)
|+ |...++..+ +-+. +. . .....+.++..++.+++.++..+++|+
T Consensus 286 DvV~NH~~~~~~~~~~~~~~~~~~~~yy~~~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~l~~W~~e~g 356 (718)
T 2vr5_A 286 DVVYNHTAEGNHLGPTLSFRGIDNTAYYMLQPDNKRYYLDFTGTGNTLNLSHPRVIQMVLDSLRYWVTEMH 356 (718)
T ss_dssp EECCSCCSSCSTTSCCSSHHHHHSTTTBCBCTTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred EeccCcccCccccCccccccCCCCCcceEeCCCCCceeecCCCccCeecCCCHHHHHHHHHHHHHHHHHcC
Confidence 96 544332210 0000 00 0 001223456777888888888887764
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=91.60 E-value=1.1 Score=45.36 Aligned_cols=152 Identities=14% Similarity=0.089 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeccCCCCC--CCCcccHHHHHHHHHHHHHhhC-CCcEEEE-eCCCCCCCc-hhhhhccC
Q 009560 318 LDVIDFLASRYAKHPALLGIELLNEPSAA--TVPLDILVPYYKQGYQIVRKYS-PTAYVIV-CQRIGNADP-LELYQANI 392 (532)
Q Consensus 318 ~~~w~~la~ry~~~p~v~g~EL~NEP~~~--~~~~~~l~~~~~~~~~aIR~~~-~~~~Viv-~~~~~~~~~-~~~~~~~~ 392 (532)
.+.++.+|+..++...=+.|-+..|..+. ..+++.+++.++.+++++|+.+ .+.++++ ++.-..... ..+...-+
T Consensus 92 d~~i~~~a~~l~~~gvPV~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~~~~~~~~YP 171 (333)
T 2ddx_A 92 NANIDTLLNTLAGYDRPVYLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWP 171 (333)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSCSSCCGGGCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCCCCchhhcCC
Confidence 34555555555443222237899998864 3467899999999999999996 2444444 432100111 22333323
Q ss_pred CCC-cEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCccc--------CC---CCC---C
Q 009560 393 GLH-NIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEW--------NV---TSG---T 457 (532)
Q Consensus 393 ~~~-nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~--------~~---~~a---~ 457 (532)
+++ =.++.+-.|.+-... + ..++ .+..+++..++|+.|+|+|... .. .+. .
T Consensus 172 GDdyVDivG~D~Y~~~~~~-------~--~~~~-----~~~~~a~~~~KPi~i~E~G~~~~~~~~l~~~~~~~~G~n~~~ 237 (333)
T 2ddx_A 172 GSEYVDWVGLSYFAPQDCN-------W--DRVN-----EAAQFARSKGKPLFLNESTPQRYQVADLTYSADPAKGTNRQS 237 (333)
T ss_dssp CGGGCSEEEEEESSGGGGT-------T--HHHH-----HHHHHHHHHTCCEEEEEECCTTEETTTTEECSCTTTCCSCEE
T ss_pred CCCEEEEEEEeccCCCCcC-------H--HHHH-----HHHHHHhcCCCcEEEeccCCcccccccccccccccCCccccc
Confidence 433 357888888651111 1 1111 2233455668999999999753 10 010 1
Q ss_pred ---HHHHHHHHHHHHHHHHh-CCC--cEEEEc
Q 009560 458 ---QKDYQDFGSAQLEVYNA-ASF--GWAYWT 483 (532)
Q Consensus 458 ---~~~~~~~~~~ql~~~~~-~~~--Gw~yW~ 483 (532)
.+....|++..++.+.+ ..+ +.+|+.
T Consensus 238 k~~~~~w~~W~~~~~~~l~~~p~v~k~~~wfn 269 (333)
T 2ddx_A 238 KTSQQLWDEWFAPYFQFMSDNSDIVKGFTYIN 269 (333)
T ss_dssp CCHHHHHHHTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred cccchhHHHHHHHHHHHHHhCcchheeEEEee
Confidence 12346777777766654 334 455544
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=91.56 E-value=0.29 Score=53.05 Aligned_cols=55 Identities=20% Similarity=0.427 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=| ||.- .+.....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 35 ~~~Ldyl~~LGv~~I~L~Pi~~----~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 100 (557)
T 1zja_A 35 TEKLDYLKGLGIDAIWINPHYA----SPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDV 100 (557)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE----CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCcc----CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35578999999999998 4421 111011111 1 469999999999999999999996
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.56 E-value=1.1 Score=50.57 Aligned_cols=57 Identities=16% Similarity=0.149 Sum_probs=38.8
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCC-----------C--CCCC--C---Cc--Ch-------HHHHHHHHHHHHHcCC
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDP-----------D--PPAP--F---IG--GS-------LEALDNALSWAEAYNI 280 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~-----------~--~~~~--~---~~--~~-------l~~Ld~~v~~a~k~Gi 280 (532)
+.++.||++|+++|=| ||.-.. .+. . ...+ | ++ +. .+.|+++|+.|+++||
T Consensus 209 ~~l~yLk~LGvt~V~L~Pi~~~~-~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi 287 (750)
T 1bf2_A 209 LKASYLASLGVTAVEFLPVQETQ-NDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGI 287 (750)
T ss_dssp HTHHHHHHHTCCEEEESCCBCBS-CTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECCcccCc-cccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCC
Confidence 4489999999999998 442211 110 0 0011 0 11 23 8999999999999999
Q ss_pred EEEEEc
Q 009560 281 KCIIDL 286 (532)
Q Consensus 281 ~VILDl 286 (532)
+||||+
T Consensus 288 ~VilDv 293 (750)
T 1bf2_A 288 KVYMDV 293 (750)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999996
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.55 E-value=0.26 Score=52.33 Aligned_cols=59 Identities=15% Similarity=0.314 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccC---CCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFD---PDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~---~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.||++|+++|=| |+.-....+ ......|+ + +..+.|+++|+.|+++||+||||+
T Consensus 46 ~~~LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 46 IDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35579999999999998 442111000 00111121 1 468999999999999999999996
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.53 E-value=0.29 Score=53.21 Aligned_cols=54 Identities=22% Similarity=0.409 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEEc-cccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRIP-VGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIp-v~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.++.|+++|+++|=|. |.- .+.....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~----~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 113 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYD----SPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 113 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEE----CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc----CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 55789999999999883 321 111111121 1 479999999999999999999996
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.40 E-value=0.31 Score=52.85 Aligned_cols=54 Identities=24% Similarity=0.425 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEEc-cccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRIP-VGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIp-v~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.++.|+++|+++|=|. |.- .+.....|+ + +.++.|+++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~~----~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVYE----SPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCEE----CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc----CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999983 321 111111121 1 479999999999999999999996
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=91.21 E-value=0.3 Score=52.88 Aligned_cols=58 Identities=26% Similarity=0.428 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+|+|=| |+.- .-....+..+. ++ +..+.|+++|+.|+++||+||||+
T Consensus 34 ~~~ldyl~~lGv~~i~l~Pi~~-~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 99 (555)
T 2ze0_A 34 IEKLDYLVELGVDIVWICPIYR-SPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDL 99 (555)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-CCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccc-CCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35688999999999998 4421 11001111111 11 469999999999999999999996
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=91.21 E-value=0.3 Score=52.72 Aligned_cols=144 Identities=18% Similarity=0.297 Sum_probs=82.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL---HAAPGS- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs- 292 (532)
.+.++.|+++|+++|=| ||.- .+.....|+ + +.++.|+++|+.|+++||+||||+ |....+
T Consensus 34 ~~~Ldyl~~LGv~~I~l~Pi~~----~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~s~~~~ 109 (543)
T 2zic_A 34 TSKLDYLQKLGVMAIWLSPVYD----SPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVVNHTSDEHA 109 (543)
T ss_dssp HHTHHHHHHHTCSEEEECCCEE----CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSH
T ss_pred HHHHHHHHHcCCCEEEECCccc----CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecCcccccch
Confidence 35578999999999998 3321 111111121 1 469999999999999999999996 332211
Q ss_pred ---------C-------------CCCCC-CCC-------------------CCCCCCCCChhhHHHHHHHHHHHHHHhCC
Q 009560 293 ---------Q-------------NGMEH-SAS-------------------RDGTTDWPASDYISQTLDVIDFLASRYAK 330 (532)
Q Consensus 293 ---------q-------------n~~~~-sg~-------------------~~g~~~W~~~~~~~~~~~~w~~la~ry~~ 330 (532)
. +.+.. .+. ......|.+++.++...++.++..+ + +
T Consensus 110 ~f~~~~~~~~~~y~d~y~~~~~p~~~~~~f~~~~w~~~~~~~~~y~~~f~~~~pdLN~~np~Vr~~i~~~~~~Wl~-~-G 187 (543)
T 2zic_A 110 WFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNFWID-K-G 187 (543)
T ss_dssp HHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHHHT-T-T
T ss_pred hhHhhhcCCCCCCcceeecCCCCCcccccCCCCCCcccCCCCcEEECcccCCCCccCcCCHHHHHHHHHHHHHHHh-c-C
Confidence 0 00000 000 0011235567778888888777776 3 3
Q ss_pred CCcEEEEEeccCCCC----C-CCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 331 HPALLGIELLNEPSA----A-TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 331 ~p~v~g~EL~NEP~~----~-~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
-..+- ++..+.-.. + ....+...++.+++.++|++ .++. ++++..+.
T Consensus 188 vDGfR-lDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~-~~vgE~~~ 239 (543)
T 2zic_A 188 IGGFR-MDVIDMIGKIPAQHIVSNGPKLHAYLKEMNAASFG-QHDL-LTVGETWG 239 (543)
T ss_dssp CCEEE-ETTGGGTTCBGGGTBCSSCTTHHHHHHHHHHHTGG-GSCC-EEEEECTT
T ss_pred CCEEE-ECCccceeecCCCccccccHHHHHHHHHHHHHHhc-cCCe-EEEeeecC
Confidence 33332 454443211 0 12234567888888888877 4554 45555553
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=91.16 E-value=0.24 Score=54.77 Aligned_cols=53 Identities=26% Similarity=0.326 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+-++.|+++|+|+|=| ||.- .+. ..-|+ + +..+.|+++|+.|+++||+||||+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~----s~~-~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFS----SLT-YHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEE----ESS-TTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCC----CCC-CCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 5578999999999998 4411 111 01111 1 478999999999999999999997
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=91.03 E-value=0.77 Score=50.82 Aligned_cols=100 Identities=16% Similarity=0.326 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEEEE-ccccccc--------------cCCC----CCCCCCcC---hHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIA--------------FDPD----PPAPFIGG---SLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~--------------~~~~----~~~~~~~~---~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.-++.||++|+|+|=| ||.-... .++. +...|-.+ ..+.|+++|+.|+++||+||||+
T Consensus 183 ~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~ 262 (657)
T 2wsk_A 183 VMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDI 262 (657)
T ss_dssp HHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4699999999999998 4421100 0000 00011101 48999999999999999999996
Q ss_pred ---CCCCCCCCCC----------------------CCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhC
Q 009560 287 ---HAAPGSQNGM----------------------EHSASRDGTTDWPASDYISQTLDVIDFLASRYA 329 (532)
Q Consensus 287 ---H~~pGsqn~~----------------------~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~ 329 (532)
|...+...+. +..+. .....+.++..++..++.++..+++|+
T Consensus 263 V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~-~~~ln~~~p~v~~~i~d~~~~W~~e~g 329 (657)
T 2wsk_A 263 VLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGC-GNTLNLSHPAVVDYASACLRYWVETCH 329 (657)
T ss_dssp CCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSS-SCCBCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred eecccccccccCccccccCCCCccceEECCCCCeeCCCCc-CCcccCCCHHHHHHHHHHHHHHHHHhC
Confidence 4443322110 00000 011234567778888888888887664
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=90.97 E-value=0.34 Score=53.91 Aligned_cols=59 Identities=17% Similarity=0.182 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCC-----CCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDP-----DPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~-----~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+.....+ .....|+ + +.++.|+++|+.|+++||+||||+
T Consensus 55 ~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 55 RQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 355789999999999984222111001 0011121 1 469999999999999999999996
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=90.75 E-value=0.13 Score=54.55 Aligned_cols=58 Identities=17% Similarity=0.140 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEccccc----------cccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWW----------IAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww----------~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++-++.|+++|+++|=|+=-+. ...++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy-~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~ 95 (471)
T 1jae_A 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (471)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccc-cccCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3436889999999999842111 11122111 1122 469999999999999999999996
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=90.69 E-value=0.3 Score=51.21 Aligned_cols=59 Identities=29% Similarity=0.370 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEc-ccc------ccccCCCCCC---------CCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIP-VGW------WIAFDPDPPA---------PFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIp-v~w------w~~~~~~~~~---------~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+ +.- +...++.... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 31 ~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 107 (435)
T 1mxg_A 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (435)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 455789999999999983 310 0011111000 0122 469999999999999999999995
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=90.54 E-value=0.41 Score=52.28 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCEEEEccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.++.|+++|+++|=|.=-+. .+.....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~~---~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 108 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFYD---SPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDL 108 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCEE---CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc---CCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 557899999999998832111 111011121 1 468999999999999999999996
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=90.43 E-value=0.16 Score=53.03 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCC-------CCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDP-------PAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~-------~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+........ ...|. + +..+.|+++|+.|+++||+||||+
T Consensus 20 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~ 95 (422)
T 1ua7_A 20 KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35578999999999998321110000000 00111 1 479999999999999999999996
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=90.20 E-value=1.3 Score=50.66 Aligned_cols=171 Identities=11% Similarity=0.038 Sum_probs=104.1
Q ss_pred HHHHHHHHHcCCCEEEEcccc---c-ccc---------------CCC------------CCCCCCc----ChHHHHHHHH
Q 009560 228 IEDFNFLYRHGINTVRIPVGW---W-IAF---------------DPD------------PPAPFIG----GSLEALDNAL 272 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w---w-~~~---------------~~~------------~~~~~~~----~~l~~Ld~~v 272 (532)
|..|+.||=+|+|..=-.++- | ... .|. =++|+.. ...+.=.+++
T Consensus 314 EreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~Lq~kIl 393 (914)
T 4a4a_A 314 EEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAELGRKMH 393 (914)
T ss_dssp HHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999976433321 0 000 010 0134322 3455567799
Q ss_pred HHHHHcCCEEEEEcCCC----------CCC-------CCCCCCCCCCCCCCCCC---ChhhHHHHHHHHHHHHHHhCCCC
Q 009560 273 SWAEAYNIKCIIDLHAA----------PGS-------QNGMEHSASRDGTTDWP---ASDYISQTLDVIDFLASRYAKHP 332 (532)
Q Consensus 273 ~~a~k~Gi~VILDlH~~----------pGs-------qn~~~~sg~~~g~~~W~---~~~~~~~~~~~w~~la~ry~~~p 332 (532)
+..++.||.+||=-..- |+. -++++.+... ...+. +|-..+....|++...+.|++..
T Consensus 394 ~RmrelGM~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~gf~~~~~~--~~~~l~p~dplF~~i~~~F~~~q~~~yG~~~ 471 (914)
T 4a4a_A 394 DRMQSFGINPVLQGYSGMVPRDFKEKNQEAQTISQGGWCGFDRPDML--KTYVNEGEADYFQKVADVFYEKQKEVFGDVT 471 (914)
T ss_dssp HHHHHHTCEEEEECCSCEECTTHHHHSTTCCEECCCEETTEECCEEE--CSSCCTTSCCHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHcCCeecCCCcCCCCChHHHhhCCCCeeecCCCCCCCCCchhc--ccccCCCCChHHHHHHHHHHHHHHHHhCCcc
Confidence 99999999999953310 111 1111110000 01121 35667778889999999999878
Q ss_pred cEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhhhhccCC-CCcEEEEeee
Q 009560 333 ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIG-LHNIVVDLHY 403 (532)
Q Consensus 333 ~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~~~~~~~-~~nvv~s~H~ 403 (532)
.+.+.|++||=..+ +...+....+++++++++++|++.=++.+ |.......++.-.+. ++-+|+|.+.
T Consensus 472 h~Y~~D~FnE~~~~--~~~~l~~~~~~v~~am~~~dp~AvWv~Qg-W~~~~~~~~L~~vp~~~~mlvLDL~s 540 (914)
T 4a4a_A 472 NFYGVDPFHQGGNT--GDLDNGKIYEIIQNKMIEHDNDAVWVIQN-WQGNPSNNKLEGLTKKDQAMVLDLFS 540 (914)
T ss_dssp SEEECCTTTTSCCC--TTCCHHHHHHHHHHHHHHHCTTCEEEEEE-BTTBSCHHHHTTCSCGGGEEEEETTT
T ss_pred cccccCccccCCCC--CCcCHHHHHHHHHHHHHHhCCCCEEEEcc-cCCCChHHHHhCCCCCCCEEEEEccc
Confidence 89999999993221 11347888999999999999998766653 422112345544333 5567777653
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=90.11 E-value=0.61 Score=49.41 Aligned_cols=59 Identities=24% Similarity=0.267 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccc------cCCC---CCCC------CCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA------FDPD---PPAP------FIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~------~~~~---~~~~------~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+... .++. .+.. .++ +..+.|+++|+.|+++||+||||+
T Consensus 28 ~~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 28 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 355789999999999984211100 0000 0001 122 469999999999999999999995
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=89.91 E-value=5.6 Score=39.36 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=70.8
Q ss_pred ccceEEEEEecCCeEEEEecCC---CceeEEcC---CCCCCcceEEEEEe--cCCeEEEEe-cCCeEEEEeC----CCce
Q 009560 65 DGTQVQIKSVTLEKYVCAESGG---GTDVSVTR---DVASSWETFTLWRV--SESEFQFRT-SQGQFLTCDG----EGCV 131 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg---~~~l~anr---~~~~~wE~f~~~~~--~~~~~~lr~-~~~~~v~~~~----~g~~ 131 (532)
......|+++..||.|-...++ |++|+--. ..-+.-.++++..+ +++.+.|++ ..|+++.+.+ .|++
T Consensus 4 ~~G~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stanGt~ 83 (293)
T 3ef2_A 4 RRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTA 83 (293)
T ss_dssp CSEEEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEE
T ss_pred CCcEEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCCCccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCCCCE
Confidence 3457789999999988776542 23444321 22345566776664 478899998 7899998863 3434
Q ss_pred EEEee---cCCCCCceEEEEEc-CCCcEEEEe-cCCceEEecc
Q 009560 132 VSATA---KSPSTPETFEIERN-NDSRVHIKL-KSGTYLQATL 169 (532)
Q Consensus 132 ~~a~~---~~~~~~e~F~~v~~-~~~~v~i~a-~nG~~l~a~~ 169 (532)
|+--. ..-+..++|.++.. +++.++|+. ..|+.|.+..
T Consensus 84 V~qw~~~~~~~g~nQqW~l~~~~g~G~y~I~n~~SGk~LDV~g 126 (293)
T 3ef2_A 84 VNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVN 126 (293)
T ss_dssp EEEECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGG
T ss_pred EEEeccCCCCCCCCcEEEEEEeCCCCEEEEEECCCCcEEEeCC
Confidence 44433 13366999999998 356788877 6689888764
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=89.85 E-value=0.64 Score=49.22 Aligned_cols=58 Identities=21% Similarity=0.261 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC--CC--------CC------CCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD--PP--------AP------FIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~--~~--------~~------~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+. ...+. +. +. .++ +..+.|+++|+.|+++||+||||+
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~-~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYK-GLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSE-ESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEcCcccc-CCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4567899999999999842111 10000 00 00 122 469999999999999999999995
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=89.65 E-value=0.67 Score=49.03 Aligned_cols=59 Identities=19% Similarity=0.228 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccc------cCCCCC---CC------CCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA------FDPDPP---AP------FIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~------~~~~~~---~~------~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+... .++... +. .++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 26 HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356789999999999984211100 000000 00 122 469999999999999999999995
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.62 E-value=0.72 Score=49.36 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC--CCC--------C------CCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD--PPA--------P------FIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~--~~~--------~------~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+. ...+. +.. . .++ +..+.|+++|+.|+++||+||||+
T Consensus 27 ~~~LdyLk~LGvt~IwL~Pi~~-~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 27 ANEANNLSSLGITALWLPPAYK-GTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCCSE-ESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccc-CCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3567999999999999842111 10000 000 0 112 479999999999999999999995
|
| >3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic} | Back alignment and structure |
|---|
Probab=89.43 E-value=1.9 Score=38.11 Aligned_cols=80 Identities=20% Similarity=0.376 Sum_probs=63.9
Q ss_pred CCcceEEEEEecCCeEEEEecC-CeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEe
Q 009560 98 SSWETFTLWRVSESEFQFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTS 175 (532)
Q Consensus 98 ~~wE~f~~~~~~~~~~~lr~~~-~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~a 175 (532)
+.--+||+..-.....+|-+.+ |.|+....+|. |.++++.-.+...+++..-+.+.|+|+. ..|.|||....|.|..
T Consensus 18 ~~~~~~~~~~~~~~~~~LYcr~~g~~LqI~~dG~-V~Gt~~~~~~~s~lei~sv~~G~V~L~g~~sg~yL~mn~~G~l~G 96 (142)
T 3p6j_A 18 DTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGTVDG 96 (142)
T ss_dssp CTTCCEEEEECSTTCEEEEETTTCCEEEECTTSB-EEEECCTTCGGGCEEEEEEETTEEEEEETTTTEEEEECTTSBEEE
T ss_pred ceeeEEEECcccCcEEEEEEeCCCEEEEECCCCC-EeeecCCCCCceEEEEEEccCCEEEEEEecCCEEEeECCCCCEee
Confidence 3445799777777778998865 89999988885 9998877677788888877667899997 4899999999998877
Q ss_pred CCC
Q 009560 176 DYP 178 (532)
Q Consensus 176 d~~ 178 (532)
...
T Consensus 97 s~~ 99 (142)
T 3p6j_A 97 TRD 99 (142)
T ss_dssp ECC
T ss_pred ccc
Confidence 543
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=88.95 E-value=0.64 Score=51.64 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCCCEEEEcccccc----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWI----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+++|-|+=-+-. ..++......++ +.++.|+++|+.|+++||+||||+-
T Consensus 63 ~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 63 TQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp HTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 34588999999999998421110 111111111122 4799999999999999999999963
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=88.69 E-value=0.65 Score=51.09 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCCCCCCC-----C--cChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCCCCCC
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPF-----I--GGSLEALDNALSWAEAYNIKCIIDLH---AAPGSQNGME 297 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~-----~--~~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsqn~~~ 297 (532)
+.++.|+++|+|+|-| |+.-......-...+. + =+..+.|+++|+.|.++||+||+|+- ..+.+. .+.
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~-~~~ 236 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGN-YLP 236 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CHH
T ss_pred HHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCCcc-ccc
Confidence 4578999999999998 3311000000000110 1 14689999999999999999999963 211110 000
Q ss_pred --CCC--------CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhh
Q 009560 298 --HSA--------SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKY 367 (532)
Q Consensus 298 --~sg--------~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~ 367 (532)
+.. .......+.+++.++..++......++|.= ..+- +|....-.. +.-..+.+++.++||+.
T Consensus 237 ~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gv-DGfR-~D~~~~~~~-----~~~~~f~~~l~~~v~~~ 309 (618)
T 3m07_A 237 LLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHL-DGLR-FDAIDQIED-----SSARHVLVEIAQRIRED 309 (618)
T ss_dssp HHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTC-SEEE-ETTGGGCCC-----CSSSCHHHHHHHHHHHH
T ss_pred ccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCc-cEEE-ecchhhhcc-----cchHHHHHHHHHHHHHh
Confidence 000 000011234567788888888888877742 2222 333322111 11234567777888888
Q ss_pred CCC-cEEEEeCCC
Q 009560 368 SPT-AYVIVCQRI 379 (532)
Q Consensus 368 ~~~-~~Viv~~~~ 379 (532)
.|+ ..++++..+
T Consensus 310 ~p~~~~~li~E~~ 322 (618)
T 3m07_A 310 ITDRPIHLTTEDS 322 (618)
T ss_dssp CCSSCCEEEECCS
T ss_pred CCCCCEEEEEEec
Confidence 775 234454433
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=88.67 E-value=0.64 Score=50.94 Aligned_cols=139 Identities=11% Similarity=0.106 Sum_probs=77.6
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCC-CCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCCC-
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPD-PPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQNG- 295 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~-~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn~- 295 (532)
+.++.||++|+|+|=| ||.-.. .... ...+. ++ +..+.|+++|+.|+++||+||||+ |..+.+..-
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~-~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 226 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFD-GQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLS 226 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECS-SSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHH
T ss_pred HHHHHHHHcCCCEEEECChhhcc-CCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccCCcccc
Confidence 4579999999999998 442100 0000 11110 11 469999999999999999999997 443211100
Q ss_pred -----CCCCC---CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhh
Q 009560 296 -----MEHSA---SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKY 367 (532)
Q Consensus 296 -----~~~sg---~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~ 367 (532)
+-+.+ .......|.+++.++..++.+++..++|+= ..+- +|.++.-.... + ..+.+++.+++++.
T Consensus 227 ~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gv-DGfR-~D~~~~i~~~~-~----~~fl~~~~~~v~~~ 299 (602)
T 2bhu_A 227 SYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHF-DGLR-LDATPYMTDDS-E----THILTELAQEIHEL 299 (602)
T ss_dssp HHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCC-SEEE-ETTGGGCCCCS-S----SCHHHHHHHHHHTT
T ss_pred ccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCC-CEEE-EechHhhhccc-h----HHHHHHHHHHHhhc
Confidence 00000 000012344577788888888888876642 2332 55554332110 1 13556667778887
Q ss_pred CCCcEEEEe
Q 009560 368 SPTAYVIVC 376 (532)
Q Consensus 368 ~~~~~Viv~ 376 (532)
++..+|-+
T Consensus 300 -~~~~li~E 307 (602)
T 2bhu_A 300 -GGTHLLLA 307 (602)
T ss_dssp -CSCCEEEE
T ss_pred -CCeEEEEE
Confidence 66655544
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=88.45 E-value=0.55 Score=52.21 Aligned_cols=59 Identities=25% Similarity=0.357 Sum_probs=40.2
Q ss_pred HHHHH--HHHHcCCCEEEEccccccccCC--------CCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFN--FLYRHGINTVRIPVGWWIAFDP--------DPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~--~la~~G~N~VRIpv~ww~~~~~--------~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++ .|+++|+++|=|+=-+.....+ .....|+ + +.++.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45688 9999999999983211110000 0011121 1 469999999999999999999996
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=88.31 E-value=0.57 Score=52.11 Aligned_cols=59 Identities=29% Similarity=0.396 Sum_probs=40.1
Q ss_pred HHHHH--HHHHcCCCEEEEccccccccCC---------CCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFN--FLYRHGINTVRIPVGWWIAFDP---------DPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~--~la~~G~N~VRIpv~ww~~~~~---------~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++ .|+++|+++|=|+=-+-....+ .....|+ + +.++.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~ 137 (683)
T 3bmv_A 58 INKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (683)
T ss_dssp HHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45688 9999999999984222100000 0011121 1 469999999999999999999996
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.14 E-value=0.54 Score=52.26 Aligned_cols=59 Identities=25% Similarity=0.340 Sum_probs=40.5
Q ss_pred HHHHH--HHHHcCCCEEEEccccccccCC-------CCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFN--FLYRHGINTVRIPVGWWIAFDP-------DPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~--~la~~G~N~VRIpv~ww~~~~~-------~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++ .|+++|+++|=|+=-+.....+ .....|+ + +.++.|+++|+.|+++||+||||+
T Consensus 55 ~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 55 INKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45688 9999999999984222110000 0011221 1 469999999999999999999996
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=88.03 E-value=0.54 Score=53.48 Aligned_cols=23 Identities=4% Similarity=0.210 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEc
Q 009560 264 SLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.++.++++|+.|.++||+||||+
T Consensus 377 ~~~efk~LV~~aH~~GIkVIlDv 399 (884)
T 4aio_A 377 RIIEYRQMVQALNRIGLRVVMDV 399 (884)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCceeeee
Confidence 47789999999999999999996
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=87.91 E-value=1.7 Score=46.63 Aligned_cols=108 Identities=20% Similarity=0.249 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHcCC-EEEEEcCCCC--CCCCCC------CCCCC-------CCCCCCCCChh---hHHHHHHHHHHHHHH
Q 009560 267 ALDNALSWAEAYNI-KCIIDLHAAP--GSQNGM------EHSAS-------RDGTTDWPASD---YISQTLDVIDFLASR 327 (532)
Q Consensus 267 ~Ld~~v~~a~k~Gi-~VILDlH~~p--Gsqn~~------~~sg~-------~~g~~~W~~~~---~~~~~~~~w~~la~r 327 (532)
.+++.++||++.|. .+|+.+.-.. |.+... ++++. ..+.+.=.+|. ....+.++++.+..+
T Consensus 89 ~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~~~~w~~~~~~~~~~~~~~p~~~~g~~~~~ewv~yl~~~ 168 (519)
T 2e4t_A 89 VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAPSSRWKEVKFEKGAPFSLTPDTEDDYVYMDEFVNYLVNK 168 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSSSTTEEEEESCCCSCCCSSCCTTSSEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCCcccccccccccCCccccCCCCCCChHHHHHHHHHHHHh
Confidence 79999999999998 8999887532 100000 01110 00000000111 111244556667777
Q ss_pred hCCC--C-cEEEEEeccCCCC----------CCCCcccHHHHHHHHHHHHHhhCCCcEEE
Q 009560 328 YAKH--P-ALLGIELLNEPSA----------ATVPLDILVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 328 y~~~--p-~v~g~EL~NEP~~----------~~~~~~~l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
|+.. | .|-.|+|-|||.. ...+.+.+.+.+.+..+++|.++|+..++
T Consensus 169 nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l~ 228 (519)
T 2e4t_A 169 YGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEIF 228 (519)
T ss_dssp HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 7653 2 4666899999942 12356788999999999999999997654
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=87.42 E-value=0.64 Score=50.90 Aligned_cols=59 Identities=20% Similarity=0.144 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-------cCCCCCC---------CCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-------FDPDPPA---------PFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-------~~~~~~~---------~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+++|=|+=-+... .++.... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 153 ~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 153 AERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 456889999999999984211100 0000000 0122 478999999999999999999995
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=87.41 E-value=10 Score=37.24 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=74.9
Q ss_pred ccCCcccccceEEEEEecC-CeEEEEecCCCceeEEcCCCCCCcceEEEEEe-cCCeEEEEe-cC-CeEEEEeCCCceEE
Q 009560 58 ILNGDMLDGTQVQIKSVTL-EKYVCAESGGGTDVSVTRDVASSWETFTLWRV-SESEFQFRT-SQ-GQFLTCDGEGCVVS 133 (532)
Q Consensus 58 ~~~~~~~~g~~v~~~s~~~-~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~-~~~~~~lr~-~~-~~~v~~~~~g~~~~ 133 (532)
..+++|.+|+-..++|..+ +|++.-..+ +...+-++. -+.-.+|+|... +++.+.+|+ .+ +..++.+..++.++
T Consensus 4 ~~~~~~~~g~~~~I~s~~~~n~vl~~~~~-~~v~~~~~~-~~~~Q~W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~~~~V~ 81 (286)
T 3aj6_A 4 TNANDLRNNEVFFISPSNNTNKVLDKISQ-SEVKLWNKL-SGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVS 81 (286)
T ss_dssp CCTTSCCTTCEEEEEETTCTTEEEEECSS-SCEEEEECC-CCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEE
T ss_pred ccCCcCCCCCEEEEEEcCCCceEEeccCC-CcEEEecCC-CCcCCeEEEEEcCCCCeEEEEECCCCcEEEEccCCCCCEE
Confidence 4578899999999998744 445555433 223333333 335666776655 468899999 33 55566655444677
Q ss_pred EeecCCCCCceEEEEEcC-CCcEEEEe--cCCceEEeccCc
Q 009560 134 ATAKSPSTPETFEIERNN-DSRVHIKL--KSGTYLQATLGN 171 (532)
Q Consensus 134 a~~~~~~~~e~F~~v~~~-~~~v~i~a--~nG~~l~a~~~~ 171 (532)
.-...-.....|.|++.. ++.++|+. +.|+.|.+..+.
T Consensus 82 ~~~~~g~~~Q~W~l~~~~~dG~y~i~n~~~s~~vLdv~~gs 122 (286)
T 3aj6_A 82 VKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDD 122 (286)
T ss_dssp EECCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECTTS
T ss_pred EeCCCCCcceEEEEEEeCCCCEEEEEECCCCceEEEecCCC
Confidence 777776788999999974 78888887 447788877544
|
| >3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A | Back alignment and structure |
|---|
Probab=86.96 E-value=2.2 Score=37.09 Aligned_cols=64 Identities=20% Similarity=0.407 Sum_probs=53.5
Q ss_pred EEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
+-||. .+|.|+....+|. |.++++...+...+++.--+-+.|+|+. ..|.|||..+.|.|....
T Consensus 8 ~~~~~~~~g~~L~I~~dG~-V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~G~v~Gs~ 73 (132)
T 3q7x_A 8 VLLRSTETGQFLRINPDGT-VDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGTVDGTR 73 (132)
T ss_dssp EEEEETTTCCEEEECTTSB-EEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSBEEEEC
T ss_pred heeeeccCcEEEEECCCCc-EEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCCCCEeecc
Confidence 56777 7899999988885 9999888778888888777667899988 889999999999887653
|
| >3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus} | Back alignment and structure |
|---|
Probab=86.89 E-value=6.6 Score=38.62 Aligned_cols=104 Identities=14% Similarity=0.220 Sum_probs=66.5
Q ss_pred ccceEEEEEecCC-eEEEEecCCC---ce-eEE-cCCCCCCcceEEEEEecCC-eEEEEe-cCCeEEEEeC----CCceE
Q 009560 65 DGTQVQIKSVTLE-KYVCAESGGG---TD-VSV-TRDVASSWETFTLWRVSES-EFQFRT-SQGQFLTCDG----EGCVV 132 (532)
Q Consensus 65 ~g~~v~~~s~~~~-~yv~ae~gg~---~~-l~a-nr~~~~~wE~f~~~~~~~~-~~~lr~-~~~~~v~~~~----~g~~~ 132 (532)
......|+++..| |.+-...++. ++ |.- ....-+.-.++++...+++ ++.|++ ..|+.+-+.+ +|++|
T Consensus 5 g~G~Y~I~N~~SGnKcLDV~g~STanGt~~Vqqw~c~nG~~nQqW~l~~~G~G~~Y~I~N~~SGKcLDV~g~sTadGa~V 84 (286)
T 3phz_A 5 GHGIYYIASAYVANTRLALSEDSSANKSPDVIISSDAVDPLNNLWLIEPVGEADTYTVRNAFAGSYMDLAGHAATDGTAI 84 (286)
T ss_dssp SSEEEEEEESSSTTEEEEECC----CCCCBEEEEETTCCCGGGCEEEEECSSTTEEEEEETTTCCEEEEGGGCCSTTEEE
T ss_pred CCcEEEEEEcCCCCeEEEcCCCCCCCCCceEEEEeCCCCChHHEEEEEECCCCcEEEEEECCCCcEEEeCCCcCCCCCeE
Confidence 4467889998888 9887665431 22 221 1111122344555555544 599998 7799987763 44455
Q ss_pred EEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEecc
Q 009560 133 SATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATL 169 (532)
Q Consensus 133 ~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~ 169 (532)
+-=...-++.++|+++.. ++.++|+. ..|+.|.+..
T Consensus 85 ~qW~~nGg~NQqW~l~~~-~G~y~I~n~~SGkcLDV~~ 121 (286)
T 3phz_A 85 IGYRPTGGDNQKWIISQI-NDVWKIKSKETGTFVTLLN 121 (286)
T ss_dssp EEECCCCCGGGCEEEEES-SSCEEEEETTTCCEEEEET
T ss_pred EEeCCCCChhcEEEEEcC-CCeEEEEECCCCcEEEeCC
Confidence 555555578999999987 77788877 7799998654
|
| >1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A | Back alignment and structure |
|---|
Probab=86.87 E-value=2.5 Score=37.45 Aligned_cols=64 Identities=17% Similarity=0.252 Sum_probs=53.4
Q ss_pred EEEEecC-CeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~-~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.+|=+.+ |.|+....+|. |.++++.......++++-.+.+.|+|+. ..|.||+.+..|.|.+..
T Consensus 21 ~rLY~r~~g~~LqI~~dG~-V~Gt~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~Lygs~ 86 (146)
T 1bfg_A 21 KRLYCKNGGFFLRIHPDGR-VDGVREKSDPHIKLQLQAEERGVVSIKGVSANRYLAMKEDGRLLASK 86 (146)
T ss_dssp EEEEETTTTEEEEECTTSC-EEEECCTTCGGGCEEEEECSTTEEEEEETTTTEEEEECTTSCEEEES
T ss_pred EEEEEcCCCEEEEECCCCe-EEeecCCCCCceEEEEEeccCCEEEEEEcccCcEEEEcCCCCEeccc
Confidence 5666655 89999987785 9999988777888999888777999988 889999999999888754
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=86.32 E-value=1.1 Score=49.32 Aligned_cols=58 Identities=19% Similarity=0.313 Sum_probs=39.4
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccC---CCCCCCCC--------c----------ChHHHHHHHHHHHHHcCCEEEEE
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFD---PDPPAPFI--------G----------GSLEALDNALSWAEAYNIKCIID 285 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~---~~~~~~~~--------~----------~~l~~Ld~~v~~a~k~Gi~VILD 285 (532)
.+.++.||++|+|+|-| ||.-. ... ..-+..|+ + ...+.|+++|+.|.++||+||||
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~~~-~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVSRM-SDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-CCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCeec-ccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 46689999999999998 44210 000 00000111 1 12799999999999999999999
Q ss_pred c
Q 009560 286 L 286 (532)
Q Consensus 286 l 286 (532)
+
T Consensus 202 ~ 202 (637)
T 1gjw_A 202 F 202 (637)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ... | Back alignment and structure |
|---|
Probab=85.96 E-value=3.3 Score=36.72 Aligned_cols=64 Identities=22% Similarity=0.279 Sum_probs=53.5
Q ss_pred EEEEecC-CeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~-~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.+|=+.+ |.|+....+|. |.++++.-.+...++++-.+.+.|+|+. ..|.||+.+..|.|.+..
T Consensus 18 ~qLY~r~~g~~LqI~~dG~-V~Gt~~~~~~~s~l~i~sv~~G~V~I~gv~s~~YLcMn~~G~Lygs~ 83 (146)
T 1rg8_A 18 KLLYCSNGGHFLRILPDGT-VDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQ 83 (146)
T ss_dssp EEEEETTTTEEEEECTTSC-EEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEES
T ss_pred EEEEEcCCCEEEEECCCCc-EeeeccCCCCceEEEEEeecCCeEEEEEcccCcEEEECCCCCEeecC
Confidence 5666655 89999988885 9999888778888988877777999988 789999999999888754
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=85.76 E-value=5.8 Score=35.02 Aligned_cols=83 Identities=12% Similarity=0.173 Sum_probs=57.3
Q ss_pred ceEEEEEecCCeEEEEecCC---CceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeC----CCceEEEeecC
Q 009560 67 TQVQIKSVTLEKYVCAESGG---GTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDG----EGCVVSATAKS 138 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg---~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~----~g~~~~a~~~~ 138 (532)
....|++...|+.+....++ |+.|+.-.-..+.-.+|++...+++.|.|+. ..|+.+.+.+ .|..++--...
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~ 153 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENASTSDGANVIQYSYSGGDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYSYS 153 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCCGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEEECCC
T ss_pred CEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCCCCccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEEeCCC
Confidence 46788888889988876542 3556554444456677887778888999998 6788887753 23345555445
Q ss_pred CCCCceEEEEE
Q 009560 139 PSTPETFEIER 149 (532)
Q Consensus 139 ~~~~e~F~~v~ 149 (532)
-++.+.|.|++
T Consensus 154 g~~nQ~W~~~~ 164 (165)
T 3pg0_A 154 GGDNQQWRLVD 164 (165)
T ss_dssp CCGGGCEEEEE
T ss_pred CCccceEEEEE
Confidence 56778888765
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=85.56 E-value=1.2 Score=49.51 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCCEEEEccccccccCCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
+.++.|+++|+++|=|+=-+. .. +.....|+ + +..+.|+++|+.|+++||+||+|+-
T Consensus 21 ~~LdYLk~LGVtaIwLsPi~~-~~-~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 21 DNLWYFXDLGVSHLYLSPVLM-AS-PGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-EC-TTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhCCCCEEEECCccc-CC-CCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 467899999999998842111 11 11111121 1 4799999999999999999999974
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=85.37 E-value=7.9 Score=34.22 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=64.0
Q ss_pred ccceEEEEEec-CCeEEEEecCC---CceeEEcCCCCCCcce----EEEEEecC---CeEEEEecCCeEEEEeC----CC
Q 009560 65 DGTQVQIKSVT-LEKYVCAESGG---GTDVSVTRDVASSWET----FTLWRVSE---SEFQFRTSQGQFLTCDG----EG 129 (532)
Q Consensus 65 ~g~~v~~~s~~-~~~yv~ae~gg---~~~l~anr~~~~~wE~----f~~~~~~~---~~~~lr~~~~~~v~~~~----~g 129 (532)
+|+ ..|+++. .||+|=.++++ |+.|+-=...-+.-.+ +++...++ +++.|++. |+|+.+.+ .|
T Consensus 4 ~G~-Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~-G~~Ldv~~~~ta~G 81 (148)
T 3nbc_A 4 PGT-YNITNVAYTNRLIDLTGSNPAENTLIIGHHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP-QSYVRVRDDNLVDG 81 (148)
T ss_dssp SEE-EEEEESSCTTCEEEEGGGCCSTTEEEEEECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS-CCEEEEGGGCCSTT
T ss_pred CCE-EEEEEecCCCCeEECCCCcCCCCcEEEEeCCCCChhheeecEEEEEECCCcccceEEEEEC-CcEEEccCCCCCCC
Confidence 454 8899988 89999887752 3445543223334455 67777777 88999987 99997753 34
Q ss_pred ceEEEeecCCCCCceEEEEEcC-CCcEEEEe-cCCceEEec
Q 009560 130 CVVSATAKSPSTPETFEIERNN-DSRVHIKL-KSGTYLQAT 168 (532)
Q Consensus 130 ~~~~a~~~~~~~~e~F~~v~~~-~~~v~i~a-~nG~~l~a~ 168 (532)
+.++.- + +...|.|+... ++.++|+. ..|+-|.+.
T Consensus 82 t~v~~~-~---~~q~W~i~~~~~~G~y~I~~~~sg~~Ldv~ 118 (148)
T 3nbc_A 82 AALVGS-Q---QPTPVSIESAGNSGQFRIKIPNLGLALTLP 118 (148)
T ss_dssp CBEEEE-S---SCCCEEEEECSSTTCEEEECTTSSEEEECC
T ss_pred cEEecC-C---CCcEEEEEEccCCCeEEEEeCCCCeEEEee
Confidence 445543 2 24678888732 46788877 556666543
|
| >1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 | Back alignment and structure |
|---|
Probab=84.43 E-value=14 Score=37.66 Aligned_cols=145 Identities=14% Similarity=0.113 Sum_probs=86.8
Q ss_pred HHHHHHHHHcCCCEEEEcccc---ccccCCCCC-----------CCCC------c-ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGW---WIAFDPDPP-----------APFI------G-GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w---w~~~~~~~~-----------~~~~------~-~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++-++.|+..++|.+-+.+.= |.+.-+..+ +.|. + =.-+.+++++++|+++||.||..+
T Consensus 36 k~~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~rgI~VIPEI 115 (367)
T 1yht_A 36 KSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPEL 115 (367)
T ss_dssp HHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEec
Confidence 567888999999999988741 222111100 0110 0 157899999999999999999876
Q ss_pred CCCCCCCCCCC---------------CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCC-CcE-EEEEeccCCCCCCCC
Q 009560 287 HAAPGSQNGME---------------HSASRDGTTDWPASDYISQTLDVIDFLASRYAKH-PAL-LGIELLNEPSAATVP 349 (532)
Q Consensus 287 H~~pGsqn~~~---------------~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~-p~v-~g~EL~NEP~~~~~~ 349 (532)
- .||....+- .+....+...-.+++..+-..++++.+++-|.+. +.+ +| .-|.......
T Consensus 116 D-~PGH~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~lFp~~s~~iHiG---gDE~~~~~~~ 191 (367)
T 1yht_A 116 D-SPNHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIG---GDEFGYSVES 191 (367)
T ss_dssp E-ESSSCHHHHHHHHHHHCHHHHHHHBCSSCTTSBCTTCHHHHHHHHHHHHHHHHHHGGGCSEEEEE---CCSCCTTSCC
T ss_pred c-chHHHHHHHHhcccccCcccccccCCCCCCceeCCCCHHHHHHHHHHHHHHHHhcCCCccEEEeC---Cccccccccc
Confidence 4 355321100 0000011122235677788888999999999752 222 23 2343322223
Q ss_pred cccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 350 LDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 350 ~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
.+.+..|.+++.+.|++.+. ++++-++
T Consensus 192 ~~~~~~f~~~~~~~v~~~g~-~~i~W~d 218 (367)
T 1yht_A 192 NHEFITYANKLSYFLEKKGL-KTRMWND 218 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-EEEEEST
T ss_pred hHHHHHHHHHHHHHHHHCCC-eEEEecc
Confidence 45688899999999999864 4444343
|
| >1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1 | Back alignment and structure |
|---|
Probab=84.06 E-value=4.3 Score=35.90 Aligned_cols=64 Identities=23% Similarity=0.208 Sum_probs=53.6
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
..|=+.+|.|+....+|. |.++++.-.+...++++-.+-+.|+|+. ..|.|||.+..|.|.+.-
T Consensus 17 ~~LY~~~g~~LqI~~dG~-V~Gt~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Lygs~ 81 (145)
T 1nun_A 17 RKLFSFTKYFLKIEKNGK-VSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSK 81 (145)
T ss_dssp EEEEETTSCEEEECTTSC-EEEECCSCCTTSCEEEEEEETTEEEEEETTTTEEEEECTTSBEEEES
T ss_pred EEEEEcCCeEEEECCCCc-EeeecCCCCCceeEEEEEecCCeEEEEEcccCcEEEEcCCCCEeecC
Confidence 466666788999988885 9999888778888998877767999988 889999999999988753
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=83.96 E-value=1.5 Score=50.57 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccC--------CCCCCC---C------Cc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFD--------PDPPAP---F------IG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~--------~~~~~~---~------~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+++|=|+=-+....+ .....+ | ++ +..+.|+++|+.|+++||+||||+-
T Consensus 856 ~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 856 AKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45699999999999998432211111 000000 1 11 4789999999999999999999975
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=83.55 E-value=20 Score=37.90 Aligned_cols=129 Identities=13% Similarity=0.134 Sum_probs=79.8
Q ss_pred HHHHHHHHHcCCCEEEEccccc---cccCCCCC------CCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWW---IAFDPDPP------APFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww---~~~~~~~~------~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
++-.+.+|++|++.|=+---.- ...+..-. .|+....-+.+.++++.|+++||++-+-++... +.+
T Consensus 65 ~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d-----~~~ 139 (478)
T 3ues_A 65 DQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWD-----RTE 139 (478)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCC-----SSC
T ss_pred HHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHH-----hCC
Confidence 6778889999999987633110 01111100 122222357899999999999999999877521 222
Q ss_pred CCCCCCCCCCC-ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccC--CCCCCCCcccHHHHHHHHHHHHHhhCCCcEEE
Q 009560 299 SASRDGTTDWP-ASDYISQTLDVIDFLASRYAKHPALLGIELLNE--PSAATVPLDILVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 299 sg~~~g~~~W~-~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NE--P~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
. .+. .+.+.+.+..-++.|..+|+....++ +|-.+. |.... ....+ ++.++.||+..|+.+|.
T Consensus 140 ~-------~y~~~~~y~~~~~~ql~EL~~~Yg~~~~~W-~Dg~~~~~~~~~~-~~~~~----~~~~~~i~~~qP~~vi~ 205 (478)
T 3ues_A 140 E-------SYGKGKAYDDFYVGQLTELLTQYGPIFSVW-LDGANGEGKNGKT-QYYDW----DRYYNVIRSLQPDAVIS 205 (478)
T ss_dssp T-------TTTSSHHHHHHHHHHHHHHHHSSSCCSEEE-ECCCCCCCTTSCC-CCCCH----HHHHHHHHHHCTTSEEE
T ss_pred c-------ccCchHHHHHHHHHHHHHHHhcCCcceEEE-eeCCCCCCCccch-hhhhH----HHHHHHHHHHCcCEEEE
Confidence 1 122 24566677777788889998655555 777653 22110 11223 57889999999998754
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=83.01 E-value=1.8 Score=49.11 Aligned_cols=59 Identities=12% Similarity=0.172 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCCEEEEccccccc-------------cCCCCCCCCC----c--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 229 EDFNFLYRHGINTVRIPVGWWIA-------------FDPDPPAPFI----G--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 229 ~d~~~la~~G~N~VRIpv~ww~~-------------~~~~~~~~~~----~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
+.++.|+++|+++|=|+=-+-.. .++......+ + +..+.|+++|+.|+++||+||||+-
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45899999999999974211100 0110000001 1 4699999999999999999999975
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=82.97 E-value=1.6 Score=48.25 Aligned_cols=58 Identities=14% Similarity=0.151 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCC----------cChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI----------GGSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~----------~~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+++|=|+=-+. .. +....-|+ -+..+.++++++.|+++||+||+|+-
T Consensus 18 ~~~LdyL~~LGvt~V~LsPi~e-~~-~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 18 RNRLDYFVELGVTHLYLSPVLK-AR-PGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp HTTHHHHHHHTCSEEEECCCEE-ES-TTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCCcc-CC-CCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4567899999999999853221 11 11111121 14689999999999999999999964
|
| >3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A | Back alignment and structure |
|---|
Probab=82.94 E-value=16 Score=32.10 Aligned_cols=88 Identities=23% Similarity=0.389 Sum_probs=66.3
Q ss_pred eeEEcCCCCCCcceEEEEEecCCeEEEEecC-CeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEE
Q 009560 89 DVSVTRDVASSWETFTLWRVSESEFQFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQ 166 (532)
Q Consensus 89 ~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~-~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~ 166 (532)
.+...++.--.-=+|++-.-+.....|=+.+ |.|+....+|. +.++++.-.+...++|.--+-+.|+|+. ..|.|||
T Consensus 19 ~~~~~~~~~~~h~~~~~~~~~~~~r~LYcr~~g~hLqI~~dG~-V~Gt~~~~s~~s~Lei~sv~~GvV~I~Gv~tg~yL~ 97 (142)
T 3p6i_A 19 TVDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLRINPDGT-VDGTRDRSDTHIQFQISPEGNGEVLLKSTETGQYLR 97 (142)
T ss_dssp BEEEECCTTCGGGCEEEEECSSSCEEEEETTTCCEEEECTTSB-EEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEE
T ss_pred ceeeeeeccccccccceecCCCceEEEEEcCCCEEEEECCCCc-CcCcCCCCCCceEEEEEeccCCEEEEEEecCceEEe
Confidence 3455555544555677443445567888866 99999988885 9999888778888888876567899988 6799999
Q ss_pred eccCceEEeCC
Q 009560 167 ATLGNQLTSDY 177 (532)
Q Consensus 167 a~~~~~v~ad~ 177 (532)
....+.|....
T Consensus 98 Mn~dG~l~Gs~ 108 (142)
T 3p6i_A 98 INPDGTVDGTR 108 (142)
T ss_dssp ECTTSBEEEEC
T ss_pred ECCCCCCcccc
Confidence 99999887643
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=82.47 E-value=3.2 Score=42.73 Aligned_cols=76 Identities=12% Similarity=0.152 Sum_probs=52.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+++|+.++++|++.+=+...+ . ..+.+ +.|+.+++.|+++|+++-+|+....|
T Consensus 106 ~~hi~~ak~aGIDgfal~w~~--~-----~~~~d----~~l~~~~~aA~~~g~k~~f~~~~y~~---------------- 158 (382)
T 4acy_A 106 RKHIRMHIKANVGVLSVTWWG--E-----SDYGN----QSVSLLLDEAAKVGAKVCFHIEPFNG---------------- 158 (382)
T ss_dssp HHHHHHHHHHTEEEEEEEECG--G-----GGTTC----HHHHHHHHHHHHHTCEEEEEECCCTT----------------
T ss_pred HHHHHHHHHcCCCEEEEEecC--C-----CCchH----HHHHHHHHHHHHcCCEEEEEeecCCC----------------
Confidence 788999999999999765422 1 11222 57888999999999999988764311
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcE
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPAL 334 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v 334 (532)
...+..++-|..+.++|+++|+.
T Consensus 159 ----~~~~~~~~dv~~li~~Y~~~paY 181 (382)
T 4acy_A 159 ----RSPQTVRENIQYIVDTYGDHPAF 181 (382)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ----CChHHHHHHHHHHHHHhcCCCce
Confidence 11244566777777777766543
|
| >1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1 | Back alignment and structure |
|---|
Probab=82.25 E-value=4.2 Score=35.91 Aligned_cols=63 Identities=22% Similarity=0.227 Sum_probs=52.2
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSD 176 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad 176 (532)
.+|=+.+|.|+....+|. |.++++.-.+...++++--+.+.|+|+. ..|.||+.+..|.|.+.
T Consensus 13 ~~Ly~r~g~~LqI~~dG~-V~Gt~~~~~~~sile~~sv~~g~V~I~gv~s~~YLcMn~~G~Lygs 76 (144)
T 1q1u_A 13 TRLFSQQGYFLQMHPDGT-IDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSS 76 (144)
T ss_dssp EEEEETTTEEEEECTTSC-EEEESCTTSGGGCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEE
T ss_pred EEEEEcCCeEEEECCCCc-EeeecCCCCCceeEEEEeccCCEEEEEEcccCcEEEEcCCCCEEec
Confidence 456666799999988885 9999887667788888776667899988 88999999999998875
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=81.91 E-value=2.1 Score=49.60 Aligned_cols=60 Identities=22% Similarity=0.250 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccC-----C---CCC---CCC------Cc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFD-----P---DPP---APF------IG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~-----~---~~~---~~~------~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.|+++|+++|=|+=-+-...+ + ... ..| .+ +..+.|+++|+.|+++||+||||+-
T Consensus 689 ~~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 689 AQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp HHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 35689999999999988322211000 0 000 111 11 4689999999999999999999963
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=81.56 E-value=22 Score=39.55 Aligned_cols=149 Identities=13% Similarity=0.106 Sum_probs=79.1
Q ss_pred CCHHHH----HHHHHcCCCEEEEccccccccCC--CCCCCC--CcChHHH-HHHHHHHHHHcCCEEEEEcCCC---CCCC
Q 009560 226 ITIEDF----NFLYRHGINTVRIPVGWWIAFDP--DPPAPF--IGGSLEA-LDNALSWAEAYNIKCIIDLHAA---PGSQ 293 (532)
Q Consensus 226 ite~d~----~~la~~G~N~VRIpv~ww~~~~~--~~~~~~--~~~~l~~-Ld~~v~~a~k~Gi~VILDlH~~---pGsq 293 (532)
++|+.+ +.++++|++.|=|--+|...... ..-+++ +++.+-. ++.+++.+++.||++.|-+... +.|.
T Consensus 343 ~~e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~GlW~~P~~v~~~S~ 422 (720)
T 2yfo_A 343 FTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINEDSD 422 (720)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEEEEEECTTEECSSSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEEEEEecccccCCCCH
Confidence 566554 55678999998877777432111 111222 2223333 8899999999999999876531 1110
Q ss_pred C-----CC--CCCCCC------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHH---
Q 009560 294 N-----GM--EHSASR------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYY--- 357 (532)
Q Consensus 294 n-----~~--~~sg~~------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~--- 357 (532)
. .| ...+.. ....+..+|+.++.+.+.++.+.++|. -..+- +| .|++.....+...+.+++
T Consensus 423 l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~~G-IDy~K-~D-~n~~~~~~~~~~~~~~y~~~~ 499 (720)
T 2yfo_A 423 LYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQGK-IDYVK-WD-MNRSMADVYAGNLSYDYVLGV 499 (720)
T ss_dssp HHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTSC-CCEEE-EC-CCSCCCSCCSTTHHHHHHHHH
T ss_pred HHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHHcC-CCEEE-EC-CCCCccccCCccHHHHHHHHH
Confidence 0 00 000100 001234467777777777777766652 22333 55 243321111111134443
Q ss_pred HHHHHHHHhhCCCcEEEEeC
Q 009560 358 KQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 358 ~~~~~aIR~~~~~~~Viv~~ 377 (532)
.++.++||+..|+..+..+.
T Consensus 500 y~l~~~l~~~~p~v~~e~C~ 519 (720)
T 2yfo_A 500 YDFMERLCSRYPDLLLEGCS 519 (720)
T ss_dssp HHHHHHHHHHSTTCEEEECB
T ss_pred HHHHHHHHHhCCCcEEEecc
Confidence 46788899999986655543
|
| >1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A* | Back alignment and structure |
|---|
Probab=81.40 E-value=4.7 Score=36.79 Aligned_cols=63 Identities=24% Similarity=0.176 Sum_probs=53.1
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSD 176 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad 176 (532)
..|=+.+|.|+....+|. |.++++.......++++-.+.+.|+|+. ..|.|||.+..|.|.+.
T Consensus 30 ~qLY~r~g~~LqI~~dG~-V~Gt~~~~s~~silei~sv~~g~V~I~gv~s~~YLcMn~~G~Lygs 93 (174)
T 1ihk_A 30 RQLYCRTGFHLEIFPNGT-IQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGS 93 (174)
T ss_dssp EEEEETTSCEEEECTTSC-EEEESSTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTCCEEEE
T ss_pred EEEEecCCcEEEECCCCc-EEeecCCCCCcceEEEEeccCceEEEEEcccCcEEEEcCCCCEecc
Confidence 567777799999988885 9999987677888888877777999988 88999999999998874
|
| >1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A | Back alignment and structure |
|---|
Probab=80.63 E-value=3.8 Score=36.00 Aligned_cols=63 Identities=22% Similarity=0.197 Sum_probs=52.0
Q ss_pred EEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 114 QFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 114 ~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
+|=+.+|.|+....+|. |.++++.-.+...++++-.+.+.|+|+. ..|.||+.+..|.|.+..
T Consensus 14 ~LY~r~g~~L~I~~dG~-V~Gt~~~~~~~s~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Lygs~ 77 (140)
T 1qql_A 14 RLFCRTQWYLRIDKRGK-VKGTQEMRNSYNIMEIRTVAVGIVAIKGVESEYYLAMNKEGKLYAKQ 77 (140)
T ss_dssp CCEETTTEEEEECTTCC-EEEESCTTCSTTCEEEEEEETTEEEEEETTTCCCCEECTTSCEECCS
T ss_pred EEEecCCeEEEECCCCe-EEeecCCCCCceEEEEEeecCCEEEEEEcccCcEEEEcCCCCEEecc
Confidence 33345689999988885 9999888778888998877767999988 889999999999888754
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=80.51 E-value=7.4 Score=41.15 Aligned_cols=128 Identities=15% Similarity=0.153 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCCEEEEccccc---cccCCCCCCCC-------CcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWW---IAFDPDPPAPF-------IGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww---~~~~~~~~~~~-------~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
++-.+.+|++|++.|=+---.- ...+. ...+| ....-+.+.++++.|+++||++-+-+|... |.
T Consensus 57 ~~w~~~~k~aGaky~v~takHHdGf~lw~S-~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~d-----w~ 130 (469)
T 3eyp_A 57 RQWMQTLKAAGIPAAILTAKHADGFCLWPS-KYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPHD-----RH 130 (469)
T ss_dssp HHHHHHHHHTTCCEEEEEEECTTCCBSSCC-TTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSSC-----HH
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCCccccCC-CCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChhH-----hC
Confidence 6778889999999986632110 01111 11122 112238899999999999999999888521 11
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEE
Q 009560 298 HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 298 ~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~V 373 (532)
+.- .+.+..+.+.+.+..=++.|.++|+.-..++ ||-.+.+. .+.....+| .+.||+..|+.+|
T Consensus 131 ~~~----~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~~lW-~Dg~~~~~---~~~~~~~~w----~~~i~~~qP~~vi 194 (469)
T 3eyp_A 131 EHL----SPLYTTERYKEYYAHQLGELMSDYGKIWETW-WDGAGADE---LTTPVYRHW----YKIVREKQPDCVI 194 (469)
T ss_dssp HHT----STTCCHHHHHHHHHHHHHHHHHSSCCCCEEE-CCCTTCTT---CCHHHHHHH----HHHHHHHCTTCEE
T ss_pred CCc----CcccCcHHHHHHHHHHHHHHHhcCCcccEEE-eCCCCCCC---ccchhHhHH----HHHHHHHCcCcEE
Confidence 100 0122235566666666778888998655555 66655432 122222333 3899999998765
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 532 | ||||
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 1e-51 | |
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 4e-06 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 7e-49 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 2e-07 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 3e-32 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 2e-27 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 1e-23 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 5e-23 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 2e-21 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 3e-19 | |
| d1dfca3 | 123 | b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens | 2e-17 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 2e-16 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 1e-15 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 2e-15 | |
| d1dfca4 | 111 | b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens | 2e-14 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 4e-14 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 1e-13 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 2e-13 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 2e-13 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 6e-07 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 0.002 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 2e-12 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 2e-12 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 6e-12 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 2e-11 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 0.003 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 0.004 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 6e-09 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 5e-07 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 4e-06 | |
| d1foba_ | 334 | c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi | 5e-06 |
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 179 bits (454), Expect = 1e-51
Identities = 76/342 (22%), Positives = 130/342 (38%), Gaps = 44/342 (12%)
Query: 203 YQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG 262
Y G + AK L+ H +TF +DF + G N VRIP+G+W D G
Sbjct: 51 YHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSG 110
Query: 263 GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVID 322
LD A+ WA ++K +DLH A GSQNG ++S R + + ++ T++V++
Sbjct: 111 LQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLN 169
Query: 323 FLASRYAKHPAL---LGIELLNEPSAATVPL-DILVPYYKQGYQIVRKYSPTAYVIVCQR 378
++ +Y+ L +GIEL+NEP + + + Y Y+ +R + VI+
Sbjct: 170 YILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHD 229
Query: 379 --IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNIL--------------- 421
+ N G + +D H+Y +F + + S ++I
Sbjct: 230 AFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHW 289
Query: 422 FIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQ--------------------KDY 461
+ A L + F + W T ++
Sbjct: 290 IVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENT 349
Query: 462 QDFGSAQLEVYNAASFGWAYWTLKN-DRKHWDFEWNIRNNYL 502
+ + AQL+ + GW W K WD + + N
Sbjct: 350 RRYVEAQLDAFE-MRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.8 bits (110), Expect = 4e-06
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 34 KVRGVNLGGWLVIEGWIKPSLFDGILNGD 62
+RGVN+GGWL++E +I PSLF+ D
Sbjct: 12 PIRGVNIGGWLLLEPYITPSLFEAFRTND 40
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 171 bits (434), Expect = 7e-49
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 202 DYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFI 261
+Y G E A +L++H +T+IT +DF + G+N VRIP+G+W AF P++
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 262 GGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVI 321
G ++ L+ AL WA NI+ IDLH APGSQNG ++S RD D TL+V+
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQN-GDNTQVTLNVL 162
Query: 322 DFLASRYAKHP---ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQR 378
+ + +Y + ++GIELLNEP + +D L ++ GY +R+ VI+
Sbjct: 163 NTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDA 222
Query: 379 I-GNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQA---- 433
G N+VVD H+Y +F ++ + D+I +
Sbjct: 223 FQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWN 282
Query: 434 ------------------------LNNANGPLVFIGEWVNEWNV---TSGTQKDYQDFGS 466
A +IG ++ + + D + +
Sbjct: 283 VAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIE 342
Query: 467 AQLEVYNAASFGWAYWTLKN-DRKHWDFEWNIRNNYL 502
AQL+ + GW +W+ K + W F+ N
Sbjct: 343 AQLDAFEYT-GGWVFWSWKTENAPEWSFQTLTYNGLF 378
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 50.7 bits (120), Expect = 2e-07
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 31 GNSKVRGVNLGGWLVIEGWIKPSLFDGILNGDMLDGTQV 69
N+ +RGVNLGGW V+E ++ PSLF+ NG+ G V
Sbjct: 5 DNNVIRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPV 43
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 124 bits (311), Expect = 3e-32
Identities = 58/315 (18%), Positives = 109/315 (34%), Gaps = 42/315 (13%)
Query: 208 GYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEA 267
G + + K H +TFIT +D + G + VR+P + I D + L
Sbjct: 11 GGWISQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSY 70
Query: 268 LDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASR 327
+D L W + YN+ ++D+H APG + + +T + + + +D+ FLA R
Sbjct: 71 IDRCLEWCKKYNLGLVLDMHHAPGYRFQDFKT-----STLFEDPNQQKRFVDIWRFLAKR 125
Query: 328 YAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387
Y + ELLN+ + + +R+ T ++ + N+
Sbjct: 126 YINEREHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELK 183
Query: 388 YQANIGLHNIVVDLHYYNLFD----------------------------TFFVNMSTVDN 419
A+I IV + H+YN F FV + +
Sbjct: 184 NLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYS 243
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGE------WVNEWNVTSGTQKDYQD-FGSAQLEVY 472
+ + + + L P + E + E+ V + + + + + +
Sbjct: 244 FMMELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISLL 303
Query: 473 NAASFGWAYWTLKND 487
G A W K
Sbjct: 304 EEYDIGGAVWNYKKM 318
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 110 bits (276), Expect = 2e-27
Identities = 59/321 (18%), Positives = 92/321 (28%), Gaps = 29/321 (9%)
Query: 216 EVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWA 275
E EDF ++ + N VRIP+ + D P E +D + W
Sbjct: 11 EAFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWG 70
Query: 276 EAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALL 335
E Y I I LH APG E + D A + I L
Sbjct: 71 EKYGIHICISLHRAPGYSVNKEVEEKTNLWKDETAQEAFIHHWSFI--ARRYKGISSTHL 128
Query: 336 GIELLNEPSAA---TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANI 392
L+NEP + ++ K+ +RK P +I+ P++ ++
Sbjct: 129 SFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPVD----DL 184
Query: 393 GLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKS-----------------REAQLQALN 435
+ N V Y F VD+ F
Sbjct: 185 TIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKL 244
Query: 436 NANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEW 495
G VF GE + LE++ + G+A W + D E
Sbjct: 245 RQKGIEVFCGEM---GAYNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILDSER 301
Query: 496 NIRNNYLQLGNSPNMQIFNSL 516
G+ + ++ L
Sbjct: 302 KDVEYEEWYGHKLDRKMLELL 322
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 100 bits (249), Expect = 1e-23
Identities = 44/304 (14%), Positives = 90/304 (29%), Gaps = 41/304 (13%)
Query: 223 NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC 282
T + + + + G NTVRIPV W + + +++ +
Sbjct: 59 GIKTTKQMIDAIKQKGFNTVRIPVSWH-PHVSGSDYKISDVWMNRVQEVVNYCIDNKMYV 117
Query: 283 IIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342
I++ H G S + V +A+R+A + L E +NE
Sbjct: 118 ILNTHHDVDKVKGYFPS-------SQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNE 170
Query: 343 P---------------SAATVPLDILVPYYKQGYQIVRK---YSPTAYVIVCQRIGNADP 384
P S ++ + + VR + + Y++ + + D
Sbjct: 171 PRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDG 230
Query: 385 LELYQANI------GLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSRE---------A 429
+ + I+V +H Y ++ + M+ + +
Sbjct: 231 ATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMD 290
Query: 430 QLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRK 489
+ + G V IGE T+ +Y + AQ + W +
Sbjct: 291 NIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGILCILWDNNNFSGTGE 350
Query: 490 HWDF 493
+ F
Sbjct: 351 LFGF 354
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 97.5 bits (242), Expect = 5e-23
Identities = 40/286 (13%), Positives = 76/286 (26%), Gaps = 31/286 (10%)
Query: 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
+ + L G+N R+P L L ++ +
Sbjct: 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAV 89
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
+D H N + S + +AS++A +P + + NE
Sbjct: 90 VDPHNYGRYYNSIISS-------PSDFETFWKT-------VASQFASNPL-VIFDTDNEY 134
Query: 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIV-------CQRIGNADPLELYQANIGLHN 396
+ +++ + +R T+ I +
Sbjct: 135 --HDMDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTNVNDNMKSLTDPSDK 192
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEW-VNEWNVTS 455
I+ ++H Y D + + V + I + R ANG IGE+ NV
Sbjct: 193 IIYEMHQYLDSDGSGTSATCVSST--IGQERITSATQWLRANGKKGIIGEFAGGADNVCE 250
Query: 456 GTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNY 501
D+ + G +W + F N
Sbjct: 251 TAITGMLDY----MAQNTDVWTGAIWWAAGPWWGDYIFSMEPDNGI 292
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 93.6 bits (231), Expect = 2e-21
Identities = 54/310 (17%), Positives = 92/310 (29%), Gaps = 39/310 (12%)
Query: 206 ANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG--- 262
N +G E V+ + + + G NT+R+P I P
Sbjct: 26 INWFGFETCNYVVHGLWSRDYR-SMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 263 -------GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYIS 315
SL+ +D +++A ++ I+D H S S W
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSALWYTSSVSEATW------- 137
Query: 316 QTLDVIDFLASRYAKHPALLGIELLNEP-----SAATVPLDILVPYYKQGYQIVRKYSPT 370
+ + LA RY +P ++G +L NEP P ++ V +P
Sbjct: 138 --ISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPN 195
Query: 371 AYVIVCQRIGNADPLELYQANI-----------GLHNIVVDLHYYNLFDTFFVNMSTVDN 419
+ V + N+ + +V H Y S
Sbjct: 196 LLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTF 255
Query: 420 ILFIYKSREAQLQALNNANGPLVFIGEW--VNEWNVTSGTQKDYQDFGSAQLEVYNAASF 477
+ L N N V++GE+ + K + + Y A SF
Sbjct: 256 PNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQ-YGADSF 314
Query: 478 GWAYWTLKND 487
W +W+ D
Sbjct: 315 QWTFWSWNPD 324
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 87.2 bits (215), Expect = 3e-19
Identities = 49/276 (17%), Positives = 84/276 (30%), Gaps = 37/276 (13%)
Query: 225 FITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
+ F L G N +R+ + P + + + A +++ I
Sbjct: 51 IVNENAFVALSNDWGSNMIRLAMYIGENGYATNPE-----VKDLVYEGIELAFEHDMYVI 105
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGI--ELLN 341
+D H P +D S D + +A Y HP I EL N
Sbjct: 106 VDWHVHAP---------------GDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWELAN 150
Query: 342 EPSAA----------TVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN 391
EPS + + Y + +++R+ ++V + P
Sbjct: 151 EPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDN-MILVGNPNWSQRPDLSADNP 209
Query: 392 IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEW 451
I NI+ +H+Y + A ++ + VF EW
Sbjct: 210 IDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVA-VFATEW--GT 266
Query: 452 NVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487
+ +G Y D L N + WA W+L N
Sbjct: 267 SQANGDGGPYFDEADVWLNFLNKHNISWANWSLTNK 302
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 123 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.1 bits (187), Expect = 2e-17
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESE-FQFRTSQGQFLTCD 126
QV +++ E+ V G D+S +D + ETF L +++ FRT G++ T
Sbjct: 3 QVVLQAAN-ERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLT 59
Query: 127 GEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQL--TSDYPG 179
G V +TA S + F+IE D R+ ++ +G ++ + QL + + G
Sbjct: 60 ATG-GVQSTASSKNASCYFDIEW-RDRRITLRASNGKFVTSKKNGQLAASVETAG 112
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 79.1 bits (194), Expect = 2e-16
Identities = 35/260 (13%), Positives = 69/260 (26%), Gaps = 12/260 (4%)
Query: 226 ITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIID 285
+ F L G+N VR+ + LE A A +K + D
Sbjct: 39 KKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLAD 98
Query: 286 LHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345
H + + + A + + L + A + +++ NE +
Sbjct: 99 FHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNG 158
Query: 346 ATVP---LDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLH 402
+ + G Q VR+ V + G + + +
Sbjct: 159 GLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT---------NPETSGRYAWIAETL 209
Query: 403 YYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQ 462
+ + D S K+ + L ++ + G V + E + G
Sbjct: 210 HRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNT 269
Query: 463 DFGSAQLEVYNAASFGWAYW 482
+ Q G A
Sbjct: 270 APKNGQTLNNPVTVQGQANA 289
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 75.2 bits (184), Expect = 1e-15
Identities = 44/285 (15%), Positives = 83/285 (29%), Gaps = 47/285 (16%)
Query: 225 FITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
F T + L + + VR +G + G+ ++ + A A ++ I
Sbjct: 38 FYTADTVASLKKDWKSSIVRAAMGVQ---ESGGYLQDPAGNKAKVERVVDAAIANDMYAI 94
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
I H A + S+ + +A +Y P ++ E+ NEP
Sbjct: 95 IGWH-------------------SHSAENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEP 134
Query: 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHY 403
+ + PY + +R P +IV + + E + I NI LH+
Sbjct: 135 -LQVSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLHF 193
Query: 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQD 463
Y S + + I +V EW + +
Sbjct: 194 Y----AGTHGESLRNKARQALNNG----------------IALFVTEWGTVNADGNGGVN 233
Query: 464 FGSAQ--LEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLQLGN 506
+ + A W L + + + N + G
Sbjct: 234 QTETDAWVTFMRDNNISNANWALNDKNEGASTYYPDSKNLTESGK 278
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 75.3 bits (184), Expect = 2e-15
Identities = 49/271 (18%), Positives = 91/271 (33%), Gaps = 42/271 (15%)
Query: 223 NTFITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK 281
F+ E +L GIN R + D P+ E + A+ A +I
Sbjct: 38 GQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-----VKEKVKEAVEAAIDLDIY 92
Query: 282 CIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN 341
IID H + Y + D D ++ Y +P + E+ N
Sbjct: 93 VIIDWHILSD----------------NDPNIYKEEAKDFFDEMSELYGDYPNV-IYEIAN 135
Query: 342 EPSAATVPL-DILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVD 400
EP+ + V + + PY ++ I+R P +IV + D + N++
Sbjct: 136 EPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYA 195
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460
H+Y + D + + G +F+ EW + +G
Sbjct: 196 FHFY----AGTHGQNLRDQVDYALD------------QGAAIFVSEW--GTSAATGDGGV 237
Query: 461 YQDFGSAQLEVYNAASFGWAYWTLKNDRKHW 491
+ D ++ + + WA W+L + +
Sbjct: 238 FLDEAQVWIDFMDERNLSWANWSLTHKDESS 268
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (164), Expect = 2e-14
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 10/101 (9%)
Query: 79 YVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKS 138
++ GT + R ++ F L ++ + + S G++ T + V S S
Sbjct: 12 FIGCRKVTGT-LDANRSS---YDVFQL-EFNDGAYNIKDSTGKYWTVGSDSAVTS----S 62
Query: 139 PSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLTSDYPG 179
TP F E + ++V IK G YL+ L +
Sbjct: 63 GDTPVDFFFEFCDYNKVAIK-VGGRYLKGDHAGVLKASAET 102
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 71.7 bits (174), Expect = 4e-14
Identities = 45/322 (13%), Positives = 82/322 (25%), Gaps = 49/322 (15%)
Query: 220 RHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDP-----DPPAPFIGGSLEALDNALSW 274
+ + + HG N+VR+ + P + + L
Sbjct: 37 YSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHA 96
Query: 275 AEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPAL 334
A+ +NI L Q+ T S + +A+ AL
Sbjct: 97 AQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYID----HALKPMANALKNEKAL 152
Query: 335 LGIELLNEPSAA---------------------------TVPLDILVPYYKQGYQIVRKY 367
G +++NEP + + +++
Sbjct: 153 GGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEV 212
Query: 368 SPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSR 427
P A V V AD + N+ + +V F + T D
Sbjct: 213 DPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNES 272
Query: 428 EAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487
+ N + IGE+ E ++ ++ Y G W+
Sbjct: 273 PFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWA-------YTKGYSGAWTWSR--- 322
Query: 488 RKHWDFEWNIRNNYLQLGNSPN 509
D WN + +Q S
Sbjct: 323 ---TDVSWNNQLRGMQHLKSRT 341
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 69.1 bits (168), Expect = 1e-13
Identities = 37/267 (13%), Positives = 81/267 (30%), Gaps = 51/267 (19%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288
+ F + HG NTVR+ + + + + P+ + N +S + + C++++H
Sbjct: 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSD--------VANVISLCKQNRLICMLEVHD 87
Query: 289 APGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP-SAAT 347
G + + Q +D L S + I + NEP +
Sbjct: 88 TTGYGE-------------QSGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDS 134
Query: 348 VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNAD-------PLELYQANIGLHNIVVD 400
+ Q +R ++V D + A+ N V
Sbjct: 135 ATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFS 194
Query: 401 LHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKD 460
+H Y ++ S +++ G + IGE+ ++ + + +
Sbjct: 195 IHMYGVYSQASTITSYLEH---------------FVNAGLPLIIGEFGHDHSDGNPDEDT 239
Query: 461 YQDFGSAQLEVYNAASFGWAYWTLKND 487
G+ W+ +
Sbjct: 240 IMAE-------AERLKLGYIGWSWSGN 259
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 68.8 bits (167), Expect = 2e-13
Identities = 36/277 (12%), Positives = 78/277 (28%), Gaps = 52/277 (18%)
Query: 223 NTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC 282
+ G NTVRI + + D ++ + N +S AE N+
Sbjct: 30 YKDQATTAIEGIANTGANTVRIVLSDGGQWTKDD--------IQTVRNLISLAEDNNLVA 81
Query: 283 IIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE 342
++++H T + + +++ +D + S + I + NE
Sbjct: 82 VLEVHD----------------ATGYDSIASLNRAVDYWIEMRSALIGKEDTVIINIANE 125
Query: 343 PSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQAN------IGLHN 396
+ YKQ +R +++ P ++ N
Sbjct: 126 WFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRN 184
Query: 397 IVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSG 456
+ +H Y + + N + + IGE+ +
Sbjct: 185 TMFSIHMYEYAGG-------------NASQVRTNIDRVLNQDLA-LVIGEFGHRHTNGDV 230
Query: 457 TQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDF 493
+ + GW W+ K + W++
Sbjct: 231 DESTIMSY-------SEQRGVGWLAWSWKGNGPEWEY 260
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.9 bits (158), Expect = 2e-13
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 78 KYVCAESGGGTDVSVTRDVASSWETFTLWRVSESE----FQFRTSQGQFLTCDGEGCVVS 133
KY+ AE+ G V+ + + +TL + + R+ G++L D +G V+
Sbjct: 15 KYLTAEAFGFK-VNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDG-NVT 72
Query: 134 ATAKSPSTPETFEIERNNDSRVHIK-LKSGTYLQATLGN 171
+ P F I ++D R ++ Y T
Sbjct: 73 CEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDR 111
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (110), Expect = 6e-07
Identities = 14/95 (14%), Positives = 37/95 (38%), Gaps = 6/95 (6%)
Query: 54 LFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEF 113
++ D V ++S +Y+ A+ G +V+ R+V F + + +
Sbjct: 38 IWTLEQPPDEAGSAAVCLRSHL-GRYLAADKDG--NVTCEREVPGPDCRFLIVAHDDGRW 94
Query: 114 QFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEI 147
++ ++ + +S A++ S E + +
Sbjct: 95 SLQSEAHRRYFGGTEDR--LSCFAQTVSPAEKWSV 127
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.1 bits (83), Expect = 0.002
Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 8/95 (8%)
Query: 108 VSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSR----VHIKLKSGT 163
+ +F ++LT + G V+A+A S + + +E+ D V ++ G
Sbjct: 2 AVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGR 61
Query: 164 YLQATLGNQLTSDYPGMPGWDDNAATFEMAIVANN 198
YL A +T + F + +
Sbjct: 62 YLAADKDGNVTCEREVPGPD----CRFLIVAHDDG 92
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 66.6 bits (161), Expect = 2e-12
Identities = 48/278 (17%), Positives = 84/278 (30%), Gaps = 27/278 (9%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGG-------------SLEALDNALSWA 275
F+ + G+ VR+ + P P + L+ LD + A
Sbjct: 40 STFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSA 99
Query: 276 EAYNIKCIIDLHAAPGSQNGMEHSASRDG---TTDWPASDYISQTLDVIDFLASRYAKHP 332
E +N+K II G+ + G TT + + +Q + + SRYA
Sbjct: 100 EQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANST 159
Query: 333 ALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIV-CQRIGNADPLELYQAN 391
A+ EL NEP D++V + Q V+ V + + +G + Y
Sbjct: 160 AIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYT 219
Query: 392 IGLHNIVVDLHYYNLFDTFFVNM---STVDNILFIYKSREAQLQALNNANGPLVFIGEWV 448
G D ++ S N + + A A P E+
Sbjct: 220 YGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGNGWIQTHAAACLAAGKP-CVFEEY- 277
Query: 449 NEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486
+ +Q + G +W +
Sbjct: 278 GAQQNPCTNEAPWQT-----TSLTTRGMGGDMFWQWGD 310
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 66.3 bits (160), Expect = 2e-12
Identities = 37/308 (12%), Positives = 77/308 (25%), Gaps = 36/308 (11%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAP--FIGGSLEALDNALSWAEAYNIKCIIDL 286
F ++ +N R P AP + + LD +S A+ Y I I+ L
Sbjct: 43 NTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSL 102
Query: 287 HAAPGSQNGMEHSASRDGTTDWPASD---------YISQTLDVIDFLASR--------YA 329
+ G + + + + + +R Y
Sbjct: 103 VNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYK 162
Query: 330 KHPALLGIELLNEPSAATVP-LDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNA---DPL 385
P +L EL+NEP + + + ++ + +
Sbjct: 163 DDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQY 222
Query: 386 ELYQANIGLHNIVVDLHYYNLFDTFFV------NMSTVDNILFIYKSREAQLQALNNANG 439
G + I + F T + T + +
Sbjct: 223 NPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKMLK 282
Query: 440 PLVFIGEWVNEWNVTSGTQKDYQDFGSAQLE-VYNAASF-----GWAYWTLK-NDRKHWD 492
+ I E+ T ++ ++N A G +W + +D
Sbjct: 283 KPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMSSFD 342
Query: 493 FEWNIRNN 500
+ +
Sbjct: 343 DGYQVVLQ 350
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 64.1 bits (155), Expect = 6e-12
Identities = 45/264 (17%), Positives = 81/264 (30%), Gaps = 41/264 (15%)
Query: 225 FITIEDFNFL-YRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI 283
F T E +R +G G++ LD ++ A A ++ I
Sbjct: 38 FYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVI 96
Query: 284 IDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEP 343
ID H+ A + + + +A++Y ++ + E+ NEP
Sbjct: 97 IDFHSHE-------------------AHTDQATAVRFFEDVATKYGQYDNV-IYEIYNEP 136
Query: 344 SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHY 403
+ ++ + PY + +R P ++V + D Q I NI LH+
Sbjct: 137 LQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHF 195
Query: 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQD 463
Y S + NG +F EW G +
Sbjct: 196 Y----AGTHGQSYRNKAQTALD------------NGIALFATEW--GTVNADGNGGVNIN 237
Query: 464 FGSAQLEVYNAASFGWAYWTLKND 487
A + + + A W L +
Sbjct: 238 ETDAWMAFFKTNNISHANWALNDK 261
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 59.1 bits (143), Expect = 2e-11
Identities = 15/110 (13%), Positives = 31/110 (28%), Gaps = 8/110 (7%)
Query: 78 KYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAK 137
++ AE V F + +T G++L+ V +
Sbjct: 12 HFLSAEGEA---VKTHHGHHDHHTHFHVENHGGK-VALKTHCGKYLSIGDHKQVY-LSHH 66
Query: 138 SPSTPETFEIERNNDSRVHIKLKSGTYLQATLGN--QLTSDYPGMPGWDD 185
F +E + +V IK Y+ A + +++
Sbjct: 67 LHGDHSLFHLEH-HGGKVSIKGHHHHYISADHHGHVSTKEHHDHDTTFEE 115
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 35.2 bits (81), Expect = 0.003
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 115 FRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKLKSGTYLQATLGNQLT 174
F++ G FL+ +GE V F + N+ +V +K G YL Q+
Sbjct: 6 FKSHHGHFLSAEGEA--VKTHHGHHDHHTHFHV-ENHGGKVALKTHCGKYLSIGDHKQVY 62
Query: 175 SDYPGMPGWD 184
+
Sbjct: 63 LSHHLHGDHS 72
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 35.2 bits (81), Expect = 0.004
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTL 105
G +V IK Y+ A+ G D +++E +
Sbjct: 79 HGGKVSIKGHH-HHYISADHHGHVSTKEHHDHDTTFEEIII 118
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 55.6 bits (132), Expect = 6e-09
Identities = 31/333 (9%), Positives = 88/333 (26%), Gaps = 61/333 (18%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGS--------LEALDNALSWAEAYNI 280
++ + L G+N +R+ + P + L+ LD L ++
Sbjct: 45 KELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDM 104
Query: 281 KCIIDLHAAPGSQNGME--------------------HSASRDGTTDWPASDYISQTLDV 320
++ + GM + + + + +
Sbjct: 105 TVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKT 164
Query: 321 IDFLASRYAK--------HPALLGIELLNEP-----SAATVPLDILVPYYKQGYQIVRKY 367
++ + +R ++ +L NEP I + + ++
Sbjct: 165 LEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTL 224
Query: 368 SPTAYVIV--CQRIGNADPLELYQANIGLHNI-VVDLHYY----NLFDTFFVNMSTVDNI 420
V +G+ + ++++ +I + H + + FD +
Sbjct: 225 DAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPSAW 284
Query: 421 LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASF--- 477
A + N P + + E+ + ++ S ++
Sbjct: 285 EKAQNYMRAHIDVAKQLNKP-LVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASL 343
Query: 478 -------GWAYWTLKND--RKHWDFEWNIRNNY 501
G+ W ++ W +++
Sbjct: 344 EQGEPSAGYNIWAWNGYGRTTRANYWWQEGDDF 376
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Score = 49.5 bits (117), Expect = 5e-07
Identities = 34/302 (11%), Positives = 81/302 (26%), Gaps = 27/302 (8%)
Query: 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL 286
N L +G+NTVR V W+ +P +L+ A+A + ID
Sbjct: 29 AQPLENILAANGVNTVRQRV--WV--NPADGN----YNLDYNIAIAKRAKAAGLGVYIDF 80
Query: 287 HAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNE---- 342
H + + + +D + + A++ I +
Sbjct: 81 HYSDTWADPAHQTMPAGWPSDIDN--LSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRA 138
Query: 343 ----PSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIGLHNIV 398
P+ T + ++ S + + + N + +
Sbjct: 139 GLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWY-TNVLK 197
Query: 399 VDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQ 458
+ FD V+ + + ++ L + + + E + +
Sbjct: 198 QGTLELSDFDMMGVSFYPFYSSSATLSALKSSLDNMAKTWNKEIAVVETNWPISCPNPRY 257
Query: 459 KDYQDFGSAQLEVYNAASFGWAYWTLKNDRKH------WDFEWNIRNNYLQLGNSPNMQI 512
D + +F + + W+ W +N + + +
Sbjct: 258 SFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPAW--IHNANLGSSCADNTM 315
Query: 513 FN 514
F+
Sbjct: 316 FS 317
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 47.0 bits (110), Expect = 4e-06
Identities = 43/327 (13%), Positives = 79/327 (24%), Gaps = 31/327 (9%)
Query: 229 EDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288
ED + G++ VRI W +P+P LD A++ A +K ++
Sbjct: 18 EDARRMREAGLSHVRIGEFAWALLEPEPGRL----EWGWLDEAIATLAAEGLKVVLGTPT 73
Query: 289 APGSQ--------------NGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPAL 334
A + G + + Y + ++ LA RY A+
Sbjct: 74 ATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAV 133
Query: 335 LGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTA--------YVIVCQRIGNADPLE 386
G + NE + + T QR + +E
Sbjct: 134 AGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVE 193
Query: 387 LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGE 446
L + N L YY + + + + + +
Sbjct: 194 LPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTHNFMGFFTDLDAFA 253
Query: 447 WVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYL---- 502
+ + S L + H D +
Sbjct: 254 LAQDLDFASWDSYPLGFTDLMPLPPEEKLRYART-GHPDVAAFHHDLYRGVGRGRFWVME 312
Query: 503 QLGNSPNMQIFNSLVLLGIIFAWLYLH 529
Q N N G++ W +
Sbjct: 313 QQPGPVNWAPHNPSPAPGMVRLWTWEA 339
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Score = 46.2 bits (109), Expect = 5e-06
Identities = 40/289 (13%), Positives = 76/289 (26%), Gaps = 36/289 (12%)
Query: 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDL 286
T L GIN++R V W +P L+ +A + +DL
Sbjct: 29 TQALETILADAGINSIRQRV-WV---NPSDG----SYDLDYNLELAKRVKAAGMSLYLDL 80
Query: 287 H-----AAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLN 341
H A P Q S Y + + + +A++ + I +
Sbjct: 81 HLSDTWADPSDQT-TPSGWSTTDLGTLKWQLY-----NYTLEVCNTFAENDIDIEIISIG 134
Query: 342 E--------PSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLELYQANIG 393
P T + G V+ + + + + +
Sbjct: 135 NEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYE 194
Query: 394 LHNIVVDLHYYNL-FDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN 452
++ + FD F V+ + S + L L + V + E +
Sbjct: 195 --TVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNWPVS 252
Query: 453 VTSGTQKDYQDFGSAQLEVYNAASFGWA-YWTLKNDRK-----HWDFEW 495
+ D S V F ++ +W+ W
Sbjct: 253 CPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEPAW 301
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 532 | |||
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 99.98 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.97 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.92 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.92 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.89 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.89 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.88 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.81 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.8 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.79 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.69 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.68 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.66 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.65 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.65 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.63 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.61 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.56 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.55 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.55 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.55 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.54 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.53 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 99.52 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 99.48 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.47 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.46 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.33 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 99.32 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.25 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.19 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 99.05 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 99.04 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 98.96 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.91 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.87 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 98.82 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 98.82 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.81 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.72 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 98.72 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 98.71 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 98.68 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.58 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 98.4 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 98.24 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.22 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 98.22 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.21 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 98.02 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 97.81 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 97.75 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 97.72 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 97.17 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 96.82 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.8 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 96.53 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 96.42 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.27 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 96.24 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 96.14 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 95.97 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 95.86 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.76 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 95.75 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.7 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 95.46 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 95.39 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 95.23 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 94.95 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 94.89 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 94.87 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 94.77 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 94.7 | |
| d1jlxa1 | 153 | Agglutinin {Love-lies-bleeding (Amaranthus caudatu | 94.63 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 94.53 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 94.53 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 94.51 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 94.51 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 94.43 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 94.37 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 94.33 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 94.28 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.22 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 94.16 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 94.07 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 93.64 | |
| d1jlxa2 | 146 | Agglutinin {Love-lies-bleeding (Amaranthus caudatu | 93.52 | |
| d2fdbm1 | 147 | Fibroblast growth factor 8, FGF8 {Human (Homo sapi | 93.44 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 93.32 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 93.23 | |
| d1jlxa2 | 146 | Agglutinin {Love-lies-bleeding (Amaranthus caudatu | 93.02 | |
| d1bfga_ | 126 | Basic FGF (FGF2) {Human (Homo sapiens) [TaxId: 960 | 92.96 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 92.92 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 92.9 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 92.51 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 92.45 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 92.41 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 91.81 | |
| d1nuna_ | 139 | Fibroblast growth factor-10, FGF10 {Human (Homo sa | 91.61 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 90.54 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 89.65 | |
| d1rg8a_ | 141 | Acidic FGF (FGF1) {Human (Homo sapiens) [TaxId: 96 | 89.44 | |
| d1qqka_ | 132 | Keratinocyte growth factor, FGF7 {Rat (Rattus norv | 89.43 | |
| d1bfga_ | 126 | Basic FGF (FGF2) {Human (Homo sapiens) [TaxId: 960 | 89.31 | |
| d1rg8a_ | 141 | Acidic FGF (FGF1) {Human (Homo sapiens) [TaxId: 96 | 88.86 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 88.29 | |
| d1nuna_ | 139 | Fibroblast growth factor-10, FGF10 {Human (Homo sa | 88.17 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 88.15 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 88.09 | |
| d1q1ua_ | 138 | Fibrobast growth factor homologous factor 1 (FHF1b | 87.63 | |
| d1jlxa1 | 153 | Agglutinin {Love-lies-bleeding (Amaranthus caudatu | 87.6 | |
| d1ihka_ | 157 | Fibroblast growth factor 9, FGF9 {Human (Homo sapi | 87.55 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 87.44 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 85.63 | |
| d2fdbm1 | 147 | Fibroblast growth factor 8, FGF8 {Human (Homo sapi | 85.24 | |
| d1sr4a_ | 167 | Cytolethal distending toxin subunit A {Haemophilus | 82.75 | |
| d1q1ua_ | 138 | Fibrobast growth factor homologous factor 1 (FHF1b | 81.94 | |
| d1ihka_ | 157 | Fibroblast growth factor 9, FGF9 {Human (Homo sapi | 81.76 | |
| d1nowa1 | 353 | beta-hexosaminidase B {Human (Homo sapiens) [TaxId | 80.94 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 80.93 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 80.74 | |
| d1ijta_ | 128 | Fibroblast growth factor 4 (FGF4) {Human (Homo sap | 80.32 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 80.05 |
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=1.5e-57 Score=478.56 Aligned_cols=301 Identities=28% Similarity=0.500 Sum_probs=252.9
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHc
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAY 278 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~ 278 (532)
..+||++|+.+|.+.|.++|+.||++||||+||+.||++|||+|||||+||.+.. .++++|.++.+++||++|++|+++
T Consensus 42 ~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~G~N~VRiPv~~~~~~~-~~~~~~~~~~~~~ld~~i~~a~~~ 120 (394)
T d2pb1a1 42 PVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAFQL-LDNDPYVQGQVQYLEKALGWARKN 120 (394)
T ss_dssp CCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHTTCCEEEEEEEGGGTCC-CTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHhChHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEEecHHHhcC-CCCCccchhHHHHHHHHHHHHHHC
Confidence 4589999999999999999999999999999999999999999999999987644 455678888999999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC---cEEEEEeccCCCCCCCCcccHHH
Q 009560 279 NIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP---ALLGIELLNEPSAATVPLDILVP 355 (532)
Q Consensus 279 Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p---~v~g~EL~NEP~~~~~~~~~l~~ 355 (532)
||+||||||.+||+|++++++|.. +...|.++.++++++++|++||+||+++| .|++|||+|||..+....+.+.+
T Consensus 121 gl~VilDlH~~pg~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~ 199 (394)
T d2pb1a1 121 NIRVWIDLHGAPGSQNGFDNSGLR-DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQ 199 (394)
T ss_dssp TCEEEEEEEECTTCSSCCGGGSST-TCCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHH
T ss_pred CcEEEEEeeccCCcccCcCCcCcc-CccccccHHHHHHHHHHHHHHHHHHccCCCCCceEEEeecccCCcccccHHHHHH
Confidence 999999999999999999998854 45578889999999999999999999876 69999999999876556778999
Q ss_pred HHHHHHHHHHhhCCCcEEEEeCCCCCC-CchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHH
Q 009560 356 YYKQGYQIVRKYSPTAYVIVCQRIGNA-DPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 356 ~~~~~~~aIR~~~~~~~Viv~~~~~~~-~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~ 434 (532)
|+++++++||+++|+++|++++++.+. .+..++..+...+|+||++|+|.+|+......+..+++..+++... ..
T Consensus 200 ~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~~vv~d~H~Y~~f~~~~~~~~~~~~i~~~~~~~~----~~ 275 (394)
T d2pb1a1 200 FFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGW----DA 275 (394)
T ss_dssp HHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTCCHHHHHHHHHHHHH----HH
T ss_pred HHHHHHHHHHHhCCCCeEEEcCCCcchhhhhhhccCCCCCceEEEeeecccccCCccccCCHHHHHHhhhhhhh----hh
Confidence 999999999999999999999877543 2244444445678999999999999877777777777777665322 12
Q ss_pred HhcCCCcEEEeccCcccCCCC------------------------------------CCHHHHHHHHHHHHHHHHhCCCc
Q 009560 435 NNANGPLVFIGEWVNEWNVTS------------------------------------GTQKDYQDFGSAQLEVYNAASFG 478 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~~------------------------------------a~~~~~~~~~~~ql~~~~~~~~G 478 (532)
. ....|+++|||+...+.+. ..++.+++|+++|+++|+ .+.|
T Consensus 276 ~-~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~~~d~~~~~~~~~~~~r~~~~aQ~~~~e-~~~G 353 (394)
T d2pb1a1 276 K-KESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFE-YTGG 353 (394)
T ss_dssp H-TCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHHHHHHH-TTTE
T ss_pred h-cccCcceeceecccchhhhhhhcccccccccccccCCCccccccccccChhhcCHHHHHHHHHHHHHHHHHHh-cCCc
Confidence 2 3456788999876432100 113468899999999997 6789
Q ss_pred EEEEcccCC-CCCCchHhhHhCCcccCCCC
Q 009560 479 WAYWTLKND-RKHWDFEWNIRNNYLQLGNS 507 (532)
Q Consensus 479 w~yW~~k~e-~~~Ws~~~~~~~g~~~~~~~ 507 (532)
|+||+||.+ ++.|||+.+++.|+||.+++
T Consensus 354 W~fWt~K~~~~~~W~~~~~~~~G~iP~~~~ 383 (394)
T d2pb1a1 354 WVFWSWKTENAPEWSFQTLTYNGLFPQPVT 383 (394)
T ss_dssp EEESCSCCSSCGGGCHHHHHHTTCSCSSTT
T ss_pred EEEeccccCCCCCCCHHHHHHCCCcCCCch
Confidence 999999988 77899999999999997553
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.2e-57 Score=476.95 Aligned_cols=302 Identities=24% Similarity=0.432 Sum_probs=247.0
Q ss_pred CCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCC-CcChHHHHHHHHHHHHH
Q 009560 199 LHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF-IGGSLEALDNALSWAEA 277 (532)
Q Consensus 199 ~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~-~~~~l~~Ld~~v~~a~k 277 (532)
..+||++|+.+|.+.|.++++.||++||||+||+.||++|||+|||||+||.+.. .+.+++ .+..+++||++|+||++
T Consensus 47 ~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~~i~~~G~N~VRiPi~~~~~~~-~~~~~~~~~~~~~~ld~~v~~a~~ 125 (408)
T d1h4pa_ 47 PVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQI-LDDDPYVSGLQESYLDQAIGWARN 125 (408)
T ss_dssp CSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGTCC-CTTCCCCCSSHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEeccHHHhcC-CCCCCCcChhHHHHHHHHHHHHHH
Confidence 3489999999999999999999999999999999999999999999999997643 333444 45689999999999999
Q ss_pred cCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCC---CcEEEEEeccCCCCCCCC-cccH
Q 009560 278 YNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKH---PALLGIELLNEPSAATVP-LDIL 353 (532)
Q Consensus 278 ~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~---p~v~g~EL~NEP~~~~~~-~~~l 353 (532)
+||+||||||++||+||++++++.. +...|.+++++++++++|++||+||+++ +.|+||||+|||..+..+ .+.+
T Consensus 126 ~gl~VilDlH~~pG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~ 204 (408)
T d1h4pa_ 126 NSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMK 204 (408)
T ss_dssp TTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHH
T ss_pred CCCEEEEEeCCCCCCCcCCCCCCcc-cccccCCchHHHHHHHHHHHHHHHhcccccccceeeeecccCccccccchHHHH
Confidence 9999999999999999999999865 5667888999999999999999999987 579999999999875333 3457
Q ss_pred HHHHHHHHHHHHhhCC-CcEEEEeCCCCCCC-chhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHH
Q 009560 354 VPYYKQGYQIVRKYSP-TAYVIVCQRIGNAD-PLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQL 431 (532)
Q Consensus 354 ~~~~~~~~~aIR~~~~-~~~Viv~~~~~~~~-~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~ 431 (532)
..|+++++++||+..+ +.+|++++++.+.+ ...++..+....++++++|+|.+|+......+.++++..+++....
T Consensus 205 ~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~~~~~~~~~~vv~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~-- 282 (408)
T d1h4pa_ 205 NDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTG-- 282 (408)
T ss_dssp HHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHTCCHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhccccCceEEEecCCCChhhhhhhcccCCCCceeEeeccceeeecCCcccCChhhhhhhhhhhhhh--
Confidence 8899999999998655 56677788875433 2445554456789999999999998766667778888777754432
Q ss_pred HHHHhcCCCcEEEeccCcccCCC----------------------------------------CCCHHHHHHHHHHHHHH
Q 009560 432 QALNNANGPLVFIGEWVNEWNVT----------------------------------------SGTQKDYQDFGSAQLEV 471 (532)
Q Consensus 432 ~~~~~~~g~pv~vGEwG~~~~~~----------------------------------------~a~~~~~~~~~~~ql~~ 471 (532)
.. ....|+++|||+...+.+ ...++.+++|+++|+++
T Consensus 283 --~~-~~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ 359 (408)
T d1h4pa_ 283 --VL-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENTRRYVEAQLDA 359 (408)
T ss_dssp --HT-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred --hh-cccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhCCHHHHHHHHHHHHHHHHH
Confidence 12 346789999998753210 00133568899999999
Q ss_pred HHhCCCcEEEEcccCC-CCCCchHhhHhCCcccCCCCC
Q 009560 472 YNAASFGWAYWTLKND-RKHWDFEWNIRNNYLQLGNSP 508 (532)
Q Consensus 472 ~~~~~~Gw~yW~~k~e-~~~Ws~~~~~~~g~~~~~~~p 508 (532)
|+ .+.||+||+||.| +.+|||+.++++|+||..+++
T Consensus 360 ye-~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~~~~~ 396 (408)
T d1h4pa_ 360 FE-MRGGWIIWCYKTESSLEWDAQRLMFNGLFPQPLTD 396 (408)
T ss_dssp HT-TTTEEEESCSCCSSCSTTCHHHHHHTTSSCSSTTC
T ss_pred Hh-cCCCEEEeeeeCCCCCCCCHHHHHHCCCcCCCccc
Confidence 98 5789999999998 778999999999999976554
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=8.1e-42 Score=350.68 Aligned_cols=257 Identities=21% Similarity=0.311 Sum_probs=200.7
Q ss_pred HHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCC
Q 009560 217 VLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGM 296 (532)
Q Consensus 217 ~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~ 296 (532)
..++||++|+||+||+.||++|||+|||||+|+.+....++..++++.+++||++|++|+++||+||||+|+.||.++..
T Consensus 20 ~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p~~~~~~ 99 (340)
T d1ceoa_ 20 FSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQD 99 (340)
T ss_dssp CCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC-----
T ss_pred cchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccc
Confidence 45689999999999999999999999999999877655555678888999999999999999999999999999977543
Q ss_pred CCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 297 EHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 297 ~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
.+ ....|.++..+++++++|++|++|||++|.+++|||+|||..+ +.+.|.+++++++++||+++|+++|+++
T Consensus 100 ~~-----~~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~~--~~~~~~~~~~~~~~aIR~~dp~~~I~v~ 172 (340)
T d1ceoa_ 100 FK-----TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIG 172 (340)
T ss_dssp --------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred cc-----cccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCCC--CHHHHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 32 2345778899999999999999999999999999999999864 5678999999999999999999999997
Q ss_pred CC-CCCCCchhhhhc-cCCCCcEEEEeeecccCCCcccc---------------------------------------CC
Q 009560 377 QR-IGNADPLELYQA-NIGLHNIVVDLHYYNLFDTFFVN---------------------------------------MS 415 (532)
Q Consensus 377 ~~-~~~~~~~~~~~~-~~~~~nvv~s~H~Y~~f~~~~~~---------------------------------------~~ 415 (532)
+. +++ +..+..+ +..++|++|++|+|.||..+... ..
T Consensus 173 g~~~~~--~~~~~~~~~~~d~nv~~~~H~Y~p~~fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 250 (340)
T d1ceoa_ 173 GNNYNS--PDELKNLADIDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNN 250 (340)
T ss_dssp CHHHHC--GGGGGGSCCCCCSSEEEEEEECCSHHHHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTT
T ss_pred CCCcCC--chhhhcCCCCCCCCEEEEEeccCccccccccccccccccccccccCCCcccccccccccccccccccccccc
Confidence 53 322 2233333 25688999999999886311000 00
Q ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 416 TVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 416 ~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
.......+..... .+..+.++++.||+|||||+.. .++.+...+|++++++++++.++||+||+|+.
T Consensus 251 ~~~~~~~~~~~~~-~~~~~~~~~g~Pv~igEFG~~~---~~~~~~~~~~~~~~~~~~~~~~igw~~W~~~~ 317 (340)
T d1ceoa_ 251 LKLNKELLRKDLK-PAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISLLEEYDIGGAVWNYKK 317 (340)
T ss_dssp CEESHHHHHHHHH-HHHHHHHHHCCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBS
T ss_pred ccccHHHHHHHHH-HHHHHHHHcCCCEEEEccCCcC---CCCHHHHHHHHHHHHHHHHHcCCcEEEeCCCC
Confidence 0112234443332 3445666778999999999853 34566778899999999999999999999987
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=7.2e-37 Score=309.40 Aligned_cols=258 Identities=21% Similarity=0.283 Sum_probs=198.8
Q ss_pred HHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 218 LKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 218 ~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
++.|+.+++||+||+.||++|||+|||||.|+.+.+..++..++++.|++||++|++|.++||+||||+|+.||++++.+
T Consensus 13 ~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~~~ 92 (325)
T d1vjza_ 13 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKE 92 (325)
T ss_dssp SSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTT
T ss_pred hhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccCcc
Confidence 45688899999999999999999999999998877666666778889999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCC---CCCcccHHHHHHHHHHHHHhhCCCcEE
Q 009560 298 HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAA---TVPLDILVPYYKQGYQIVRKYSPTAYV 373 (532)
Q Consensus 298 ~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~---~~~~~~l~~~~~~~~~aIR~~~~~~~V 373 (532)
++. ....|.++..+++++.+|+++++||++++ .+++|||+|||... ....+.+.+++++++++||+++|+++|
T Consensus 93 ~~~---~~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v 169 (325)
T d1vjza_ 93 VEE---KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLI 169 (325)
T ss_dssp SCC---SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred ccc---ccccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHhccCCCcEE
Confidence 543 45568788999999999999999999875 57999999999864 235567999999999999999999999
Q ss_pred EEeCCCCCCCchhhhhccCCCCcEEEEeeecccCCCccc------c-------------CChhhhHHHHHHHHHHHHHHH
Q 009560 374 IVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFV------N-------------MSTVDNILFIYKSREAQLQAL 434 (532)
Q Consensus 374 iv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~------~-------------~~~~~~i~~i~~~~~~~~~~~ 434 (532)
++++...+. ....+...+++++++|.|.++..... . ....+....+....... ...
T Consensus 170 ~v~g~~~~~----~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (325)
T d1vjza_ 170 IIDGLGYGN----IPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTW-IKL 244 (325)
T ss_dssp EEECHHHHT----BCCTTCCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHH-HGG
T ss_pred EecCCcccc----ccCCcccccceeeeecccccccccccccccccccccccCCCCccccccccccHHHHHHHHHHH-HHH
Confidence 997522111 11112467899999999998632100 0 00111222222222111 111
Q ss_pred HhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 435 NNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 435 ~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
...+.||+|||||+.. .++.+...+|++++++++++.++||+||+||.+
T Consensus 245 -~~~g~Pv~~gEfG~~~---~~~~~~~~~~~~~~l~~~~~~g~g~~~W~~~~~ 293 (325)
T d1vjza_ 245 -RQKGIEVFCGEMGAYN---KTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 293 (325)
T ss_dssp -GGGTCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred -HhcCCCEEEeeccCcC---CCCcHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 2347899999999742 456778889999999999999999999999974
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=9.2e-37 Score=312.40 Aligned_cols=290 Identities=19% Similarity=0.191 Sum_probs=201.3
Q ss_pred cccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCC----------CCCCcChHHHHHHHHHHHH
Q 009560 207 NGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPP----------APFIGGSLEALDNALSWAE 276 (532)
Q Consensus 207 ~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~----------~~~~~~~l~~Ld~~v~~a~ 276 (532)
|.+|.+.+....+.+|... .|+||+.||++|||+|||||.||.+.+..++ ..+....+++||++|++|+
T Consensus 27 N~~g~~~~~~~~~~~~~~~-~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~ 105 (358)
T d1ecea_ 27 NWFGFETCNYVVHGLWSRD-YRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAG 105 (358)
T ss_dssp ECCCBTTTTCSCTTTTTSC-HHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHH
T ss_pred ccCcccccccccccCCccH-HHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHH
Confidence 3344444444445555544 3899999999999999999999876543221 1223468999999999999
Q ss_pred HcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-----CCcc
Q 009560 277 AYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-----VPLD 351 (532)
Q Consensus 277 k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-----~~~~ 351 (532)
++||+||||+|..++++++ ...+.++..++++.++|+.+++||+++|.+++|||+|||..+. ....
T Consensus 106 ~~Gl~Vildlh~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~ 176 (358)
T d1ecea_ 106 QIGLRIILDRHRPDCSGQS---------ALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSI 176 (358)
T ss_dssp HTTCEEEEEEEESBTTBCC---------SSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTT
T ss_pred HCCCceeeecccccccCCC---------ccccCChHHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhh
Confidence 9999999999987654322 1123345678999999999999999999999999999998742 2356
Q ss_pred cHHHHHHHHHHHHHhhCCCcEEEEeCC-CC-------CCCchhhh--hc-cCCCCcEEEEeeecccCCCccccCChhhhH
Q 009560 352 ILVPYYKQGYQIVRKYSPTAYVIVCQR-IG-------NADPLELY--QA-NIGLHNIVVDLHYYNLFDTFFVNMSTVDNI 420 (532)
Q Consensus 352 ~l~~~~~~~~~aIR~~~~~~~Viv~~~-~~-------~~~~~~~~--~~-~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i 420 (532)
.+.+++++++++||+++|+++|++++. .. ..+..... .. ....+++||++|+|.++.............
T Consensus 177 ~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~ 256 (358)
T d1ecea_ 177 DWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256 (358)
T ss_dssp BHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTT
T ss_pred hHHHHHHHHHHHHHhhCCCcEEEEeccccCccccccccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhh
Confidence 789999999999999999999999742 10 00111111 11 134679999999999865332222222222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHH----HHHHHHHHHHhCCCcEEEEcccCC--------C
Q 009560 421 LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQD----FGSAQLEVYNAASFGWAYWTLKND--------R 488 (532)
Q Consensus 421 ~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~----~~~~ql~~~~~~~~Gw~yW~~k~e--------~ 488 (532)
..+...+......+.++++.||+|||||+.+.. .+...+.+ |++.+ ..+.+.++||+||+||.+ .
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~gw~~W~~k~~~~~~~G~~~ 333 (358)
T d1ecea_ 257 NNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQS--TTDQTWLKTLVQYLRPT-AQYGADSFQWTFWSWNPDSGDTGGILK 333 (358)
T ss_dssp TTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCS--HHHHHHHHHHHHHTCCH-HHHTTSSCEEEESCSCSCCTTTCCSBC
T ss_pred hhHHHHHHHHHHHHHHhcCCeEEEecCCCCCCC--CChHHHHHHHHHHHHHH-HHhcccCceEEEEcCCCCCCCCcceec
Confidence 233344444455566677889999999987542 22223333 33333 344568899999999986 2
Q ss_pred CCCchHhhHhCCcccCCCCCC
Q 009560 489 KHWDFEWNIRNNYLQLGNSPN 509 (532)
Q Consensus 489 ~~Ws~~~~~~~g~~~~~~~p~ 509 (532)
..|+.....+.++|+..+++.
T Consensus 334 ~dw~~~~~~~~~~i~~~~~~~ 354 (358)
T d1ecea_ 334 DDWQTVDTVKDGYLAPIKSSI 354 (358)
T ss_dssp TTSSSBCHHHHHHHGGGCCCC
T ss_pred CCCCCCChhhhhhcccccccc
Confidence 358888889999998765554
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=6.6e-36 Score=302.57 Aligned_cols=238 Identities=15% Similarity=0.101 Sum_probs=174.7
Q ss_pred ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 224 TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 224 t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
+|+|++||+.||++|||+|||||.|+.+.+..+...+++..+++|+++|++|.++||+||||+|+..+..+
T Consensus 30 ~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~~~~~~~--------- 100 (305)
T d1h1na_ 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYN--------- 100 (305)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETT---------
T ss_pred ccCCHHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHHHHHHHHHhcCCeEEEecccCCcccc---------
Confidence 58899999999999999999999997665544455778889999999999999999999999998632111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCC-CcEEEEeC-CCCC
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSP-TAYVIVCQ-RIGN 381 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~-~~~Viv~~-~~~~ 381 (532)
. .....+++.++|++||+||+++|.| +|||+|||+. .+.+.|.+++++++++||++++ +++|++++ .+..
T Consensus 101 -~----~~~~~~~~~~~W~~ia~~~~~~~~v-~~el~NEP~~--~~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~~~~ 172 (305)
T d1h1na_ 101 -S----IISSPSDFETFWKTVASQFASNPLV-IFDTDNEYHD--MDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTG 172 (305)
T ss_dssp -E----ECCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCS--SCHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGB
T ss_pred -c----ccccHHHHHHHHHHHHHHhCCCCee-EEEeccCCCC--ccHHHHHHHHHHHHHHHHhcCCCCCEEEECCCcccc
Confidence 0 0134678999999999999999987 5999999975 4678899999999999999985 67777764 3322
Q ss_pred C-Cc----hhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCC
Q 009560 382 A-DP----LELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSG 456 (532)
Q Consensus 382 ~-~~----~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a 456 (532)
. .. ..+..+..+.+|+||++|+|.+++........ ........+.+.+..+.+.++.|++|||||...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~g~p~~igEfG~~~----- 245 (305)
T d1h1na_ 173 AWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATC--VSSTIGQERITSATQWLRANGKKGIIGEFAGGA----- 245 (305)
T ss_dssp STTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCC--SCTTHHHHHHHHHHHHHHHTTCCEEEEEEECCS-----
T ss_pred cccccccCcccccCCCCCCCEEEEEEeCCCCCCCCccccc--cccchHHHHHHHHHHHHHHcCCcEEEEcCCCCC-----
Confidence 1 11 12222334567999999999986532211111 001111222233445667789999999999742
Q ss_pred CHHHHHHHHHHHHHHHHhCC---CcEEEEcccC
Q 009560 457 TQKDYQDFGSAQLEVYNAAS---FGWAYWTLKN 486 (532)
Q Consensus 457 ~~~~~~~~~~~ql~~~~~~~---~Gw~yW~~k~ 486 (532)
.+....+++++++.+++.+ +||+||+...
T Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~gw~~W~~g~ 277 (305)
T d1h1na_ 246 -DNVCETAITGMLDYMAQNTDVWTGAIWWAAGP 277 (305)
T ss_dssp -SHHHHHHHHHHHHHHHTCTTTEEEEEEEEECT
T ss_pred -CCcHHHHHHHHHHHHHHcCCcceEEEEecCCC
Confidence 2345678888999998887 6777888765
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=3.2e-35 Score=305.98 Aligned_cols=256 Identities=16% Similarity=0.173 Sum_probs=188.8
Q ss_pred Hhhcc-ccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 219 KRHRN-TFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 219 ~~hw~-t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
|.-|. ..+|+++|+.||++|||+|||||.|+.+.++.+ ..+++..|++|+++|++|.++||+||||+|+.+|.+++..
T Consensus 54 e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~-~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~ 132 (380)
T d1edga_ 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSD-YKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF 132 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTT-TEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC
T ss_pred CCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCCCC-CccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC
Confidence 56676 458999999999999999999999987665543 4667889999999999999999999999999998776544
Q ss_pred CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---------------cccHHHHHHHHHH
Q 009560 298 HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---------------LDILVPYYKQGYQ 362 (532)
Q Consensus 298 ~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---------------~~~l~~~~~~~~~ 362 (532)
.. .|..+...+++.++|+++|+||++++.+++||++|||+..... .+.+.++++.+++
T Consensus 133 ~~-------~~~~~~~~~~~~~~W~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (380)
T d1edga_ 133 PS-------SQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVN 205 (380)
T ss_dssp SS-------GGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-------ccCcHHHHHHHHHHHHHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHH
Confidence 32 2445678899999999999999999999999999999864221 1347899999999
Q ss_pred HHHhhC---CCcEEEEeCCCCCCCc--hhhhhc----cCCCCcEEEEeeecccCCCccc----------cCChhhhHHHH
Q 009560 363 IVRKYS---PTAYVIVCQRIGNADP--LELYQA----NIGLHNIVVDLHYYNLFDTFFV----------NMSTVDNILFI 423 (532)
Q Consensus 363 aIR~~~---~~~~Viv~~~~~~~~~--~~~~~~----~~~~~nvv~s~H~Y~~f~~~~~----------~~~~~~~i~~i 423 (532)
+||+++ ++++|++++...+.+. ...+.. +..++++++++|+|.||+.... ..........+
T Consensus 206 ~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i 285 (380)
T d1edga_ 206 TVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEV 285 (380)
T ss_dssp HHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHH
T ss_pred HHHHhccCCCceEEEeCCCccCCccccchhhcccccccCCCCCEEEEEeecCccccccccCCcCCCCccccCccccHHHH
Confidence 999986 5577888754332211 111111 1346899999999998743211 01111222223
Q ss_pred HHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 424 YKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 424 ~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
...+ +.+..+...++.||+|||||+... .+.+...+|++.+++.+++.+++|+||....
T Consensus 286 ~~~~-~~~~~~~~~~giPviiGEfG~~~~---~~~~~r~~~~~~~~~~a~~~gi~~~~Wdn~~ 344 (380)
T d1edga_ 286 TWFM-DNIYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNNN 344 (380)
T ss_dssp HHHH-HHHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHHH-HHHHHHHHhcCceEEEecccCcCC---CChHHHHHHHHHHHHHHHHcCCcEEEECCCC
Confidence 2222 233444556688999999998643 3456677888888888999999999996543
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=1.4e-32 Score=274.89 Aligned_cols=232 Identities=16% Similarity=0.172 Sum_probs=175.6
Q ss_pred hccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSA 300 (532)
Q Consensus 221 hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg 300 (532)
.|....+++||+.||++|+|+||||+.+ +..+.++.+++||++|++|.++||+||||+|..++.
T Consensus 28 ~~~~~~~~~d~~~~~~~G~N~VRl~~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~-------- 91 (297)
T d1wkya2 28 AWYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGY-------- 91 (297)
T ss_dssp GGCGGGHHHHHHHHHTTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTC--------
T ss_pred ccCchHHHHHHHHHHHCCCcEEEEeccC--------CCccCccHHHHHHHHHHHHHHCCCceEeeccccccc--------
Confidence 3555667999999999999999999964 245677789999999999999999999999986542
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 301 SRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 301 ~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
......+.++++|+++++||+++|++++||++|||... ...+.+.+++++++++||+++|+++|++++...
T Consensus 92 --------~~~~~~~~~~~~w~~~a~~~~~~p~v~~~~l~NEp~~~-~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~ 162 (297)
T d1wkya2 92 --------DSIASLNRAVDYWIEMRSALIGKEDTVIINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGW 162 (297)
T ss_dssp --------CCHHHHHHHHHHHHHTGGGTTTCTTTEEEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTT
T ss_pred --------cccccHHHHHHHHHHHHHHhcCCCCEEEEecccccccc-chhhhhhhhhhhhHHHHHhcCCCceEEEecCCc
Confidence 23577889999999999999999999999999999864 356789999999999999999999999976433
Q ss_pred CCCchhhhh------ccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC
Q 009560 381 NADPLELYQ------ANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT 454 (532)
Q Consensus 381 ~~~~~~~~~------~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~ 454 (532)
+.+...+.. .+.+.++++|++|.|.++... .+ .+.. .+.. ....+.||+|||||+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~i~y~~H~Y~~~~~~-----~~----~~~~----~~~~-~~~~g~Pv~vgEfG~~~~~~ 228 (297)
T d1wkya2 163 GQFPQSIHDYGREVFNADPQRNTMFSIHMYEYAGGN-----AS----QVRT----NIDR-VLNQDLALVIGEFGHRHTNG 228 (297)
T ss_dssp TTBTHHHHHHHHHHHHTCTTCCEEEEEEESTTTSSS-----HH----HHHH----HHHH-HHTTTCCEEEEEECSEETTE
T ss_pred ccccchhhhccccccCCCcccceeEeeccccCCCCC-----hh----hHHH----HHHH-HhhcCCCEEEEeecccCCCC
Confidence 333222111 135778999999999874321 11 1111 1112 23457899999999875433
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchHhhHh
Q 009560 455 SGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIR 498 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~~~~~ 498 (532)
.... +++++.++++++||++|+|+.+...|++..+..
T Consensus 229 ~~~~-------~~~~~~~~~~~~gw~~W~~~~~~~~~~~~~~~~ 265 (297)
T d1wkya2 229 DVDE-------STIMSYSEQRGVGWLAWSWKGNGPEWEYLDLSN 265 (297)
T ss_dssp ECCH-------HHHHHHHHHTTCEEEESCSSCCCGGGGGGCSBS
T ss_pred cHHH-------HHHHHHHHHcCCeEEEEEEECCCCCcccccccC
Confidence 3322 345566778999999999998777777765444
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=4.4e-33 Score=286.92 Aligned_cols=238 Identities=19% Similarity=0.225 Sum_probs=165.8
Q ss_pred hccccCCHHHHHHHHH-cCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFLYR-HGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~ite~d~~~la~-~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
.+..++++++++.|++ +|+|+||||+.+. + .+..+++..+++||++|++|.++||+||||+|..++...
T Consensus 47 w~~~~~~~~~~~~l~~~~G~N~VRlp~~~~----~-~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~----- 116 (357)
T d1g01a_ 47 WFGEIVNENAFVALSNDWGSNMIRLAMYIG----E-NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDP----- 116 (357)
T ss_dssp HHGGGCSHHHHHHHHTTSCCSEEEEEEESS----S-SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCT-----
T ss_pred hcccccCHHHHHHHHHhcCCCEEEEeeeec----C-CCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCC-----
Confidence 3556789999999985 8999999999652 2 223557789999999999999999999999998764321
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCc--EEEEEeccCCCCCCC----------CcccHHHHHHHHHHHHHhh
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPA--LLGIELLNEPSAATV----------PLDILVPYYKQGYQIVRKY 367 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~--v~g~EL~NEP~~~~~----------~~~~l~~~~~~~~~aIR~~ 367 (532)
++...+++.++|+++|+||+++|+ +++|||+|||+.... ....|++++++++++||+.
T Consensus 117 ----------~~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~ 186 (357)
T d1g01a_ 117 ----------RADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREK 186 (357)
T ss_dssp ----------TSGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------ChhhhhhhHHHHHHHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhc
Confidence 234556688999999999999874 678999999986421 1246899999999999999
Q ss_pred CCCcEEEEeCCCCCCCchhhhhccCCCCcEEEEeeecccCCCcccc---C-ChhhhHHHHHHHHHHHHHHHHhcCCCcEE
Q 009560 368 SPTAYVIVCQRIGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVN---M-STVDNILFIYKSREAQLQALNNANGPLVF 443 (532)
Q Consensus 368 ~~~~~Viv~~~~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~---~-~~~~~i~~i~~~~~~~~~~~~~~~g~pv~ 443 (532)
+++++|+.++.|. .+.......+..++|+||++|+|.++...... . ......+.++. .+.. ....+.|||
T Consensus 187 ~~~~iiv~~~~w~-~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~g~Pv~ 260 (357)
T d1g01a_ 187 GDNMILVGNPNWS-QRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMA----NVRY-ALDNGVAVF 260 (357)
T ss_dssp CCCCEEECCHHHH-TCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHHH----HHHH-HHHTTCCEE
T ss_pred CCceEEEecCCcc-ccchhcccccCCCCCEEEEEEEecCccCCccCCCCcccchHHHHHHHH----HHHH-HHHcCCCEE
Confidence 8766544443443 33333333345688999999999876432111 0 11111111222 2222 223578999
Q ss_pred EeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 444 IGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 444 vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
|||||+...... ......+.+..++.++++++||++|++++
T Consensus 261 vgEfG~~~~~~~--~~~~~~~~~~~~~~~~~~~isw~~W~~~~ 301 (357)
T d1g01a_ 261 ATEWGTSQANGD--GGPYFDEADVWLNFLNKHNISWANWSLTN 301 (357)
T ss_dssp EEEEESSBTTTB--SCCCHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred EEecCCcCCCCC--CCcCHHHHHHHHHHHHHcCCceEEEeCcC
Confidence 999998643111 01123345566678889999999999986
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=2.7e-32 Score=274.50 Aligned_cols=226 Identities=20% Similarity=0.338 Sum_probs=166.4
Q ss_pred hccccCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 221 HRNTFITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 221 hw~t~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
++..+++++||+.|+ ++|+|+||+|+.+. + ....+++..+++||++|++|.++||+||||+|..+|..
T Consensus 36 ~~~~~~~~~~~~~l~~~~G~N~VR~~~~~~----~-~~~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~------ 104 (300)
T d7a3ha_ 36 WYGQFVNYESMKWLRDDWGINVFRAAMYTS----S-GGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDND------ 104 (300)
T ss_dssp HHGGGCSHHHHHHHHHHTCCCEEEEEEESS----T-TSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCS------
T ss_pred cccccCCHHHHHHHHHHcCCCEEEEeeEcC----c-cCcccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCC------
Confidence 445678899999987 68999999998542 1 11234677999999999999999999999999875421
Q ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC-cccHHHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 300 ASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP-LDILVPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 300 g~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~-~~~l~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
...+.+++.++|+.+++|||++|.|+ |||+|||...... .+.+.+++++++++||+++|+++|++++.
T Consensus 105 ----------~~~~~~~~~~~w~~ia~ryk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~ 173 (300)
T d7a3ha_ 105 ----------PNIYKEEAKDFFDEMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTG 173 (300)
T ss_dssp ----------TTTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCH
T ss_pred ----------ChhhHHHHHHHHHHHHHHhCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCC
Confidence 13567889999999999999999975 9999999865433 46899999999999999999999998753
Q ss_pred CCCCCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC-CCCC
Q 009560 379 IGNADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV-TSGT 457 (532)
Q Consensus 379 ~~~~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~-~~a~ 457 (532)
....+.......+..++|+|+++|+|.++... . +.+. +.. ....+.||+|||||+.... ....
T Consensus 174 ~~~~~~~~~~~~~~~~~niv~~~H~Y~~~~~~-------~----~~~~----~~~-~~~~~~Pv~~gEfG~~~~~~~~~~ 237 (300)
T d7a3ha_ 174 TWSQDVHHAADNQLADPNVMYAFHFYAGTHGQ-------N----LRDQ----VDY-ALDQGAAIFVSEWGTSAATGDGGV 237 (300)
T ss_dssp HHHTBHHHHHTSCCSCTTEEEEEEEETTSCCH-------H----HHHH----HHH-HHHTTCCEEEEEEESSCTTSCSCC
T ss_pred CcccccchhhcCCCCCCCEEEEECCccCcCcc-------c----HHHH----HHH-HHhcCCCEEEeecCCccCCCCCCc
Confidence 22223222223346788999999999875321 1 1111 111 2235789999999986431 1111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEcccCC
Q 009560 458 QKDYQDFGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 458 ~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
...+.++.++.++++++||++|+|+..
T Consensus 238 ---~~~~~~~~~~~~~~~~igw~~W~~~~~ 264 (300)
T d7a3ha_ 238 ---FLDEAQVWIDFMDERNLSWANWSLTHK 264 (300)
T ss_dssp ---CHHHHHHHHHHHHHTTCCEEEEEESCC
T ss_pred ---CHHHHHHHHHHHHHcCCeEEEEeCcCC
Confidence 233455567788899999999999853
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=2.2e-32 Score=274.62 Aligned_cols=223 Identities=20% Similarity=0.252 Sum_probs=166.3
Q ss_pred cCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 225 ~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
++++++++.|+ ++|+|+||+|+.+... ++..++..++..+++||++|++|+++||+||||+|...
T Consensus 38 ~~~~~~~~~l~~~~g~N~VR~~~~~~~~-~~~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~------------- 103 (293)
T d1tvna1 38 FYTAETVAKAKTEFNATLIRAAIGHGTS-TGGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHE------------- 103 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTT-STTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSC-------------
T ss_pred ccCHHHHHHHHHhCCCcEEEEecccccc-cccccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCC-------------
Confidence 46789999998 5799999999987543 33334455667999999999999999999999999742
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCC
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNAD 383 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~ 383 (532)
....++++.++|+++++|||++|.|+ |||+|||.... ....+++++++++++||+++|+++|++++.....+
T Consensus 104 ------~~~~~~~~~~~w~~~a~r~k~~~~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~ 175 (293)
T d1tvna1 104 ------AHTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD 175 (293)
T ss_dssp ------GGGCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTC
T ss_pred ------CcccHHHHHHHHHHHHHHhCCCCeEE-EEEecccCCCC-cHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccc
Confidence 12567899999999999999999987 99999998753 45789999999999999999999999976322233
Q ss_pred chhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHH
Q 009560 384 PLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQD 463 (532)
Q Consensus 384 ~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~ 463 (532)
.......+..++|+||++|+|.++... +. .+. +.. ....+.|++|||||+....... .....
T Consensus 176 ~~~~~~~~~~~~~~v~s~H~Y~~~~~~-------~~----~~~----~~~-~~~~g~Pv~vgEfG~~~~~~~~--~~~~~ 237 (293)
T d1tvna1 176 VDVASQNPIDRANIAYTLHFYAGTHGQ-------SY----RNK----AQT-ALDNGIALFATEWGTVNADGNG--GVNIN 237 (293)
T ss_dssp HHHHHHSCCCSSSEEEEEEEETTTCCH-------HH----HHH----HHH-HHHTTCCEEEEEEESSCTTSCS--CCCHH
T ss_pred cchhhcCCccCCCceEEEEeeccccch-------HH----HHH----HHH-HHhcCCCeEeeccCCcccCCCC--CCCHH
Confidence 333334456788999999999885321 11 111 111 2235789999999976321110 11233
Q ss_pred HHHHHHHHHHhCCCcEEEEcccCC
Q 009560 464 FGSAQLEVYNAASFGWAYWTLKND 487 (532)
Q Consensus 464 ~~~~ql~~~~~~~~Gw~yW~~k~e 487 (532)
+.++.++.+++.++||++|+|+..
T Consensus 238 ~~~~~~~~~~~~~igw~~W~~~d~ 261 (293)
T d1tvna1 238 ETDAWMAFFKTNNISHANWALNDK 261 (293)
T ss_dssp HHHHHHHHHHHHTCCEEEEEESCS
T ss_pred HHHHHHHHHHHhCCeEEEEEeecC
Confidence 445556777888999999999863
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=99.98 E-value=6.4e-32 Score=270.98 Aligned_cols=225 Identities=20% Similarity=0.245 Sum_probs=166.3
Q ss_pred cCCHHHHHHHH-HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 225 FITIEDFNFLY-RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 225 ~ite~d~~~la-~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
++++++++.|+ ++|+|+||+|+..... .......+..+++||++|++|.++||+||||+|..++
T Consensus 38 ~~~~~~~~~l~~~~G~N~vR~~~~~~~~---~~~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~------------ 102 (291)
T d1egza_ 38 FYTADTVASLKKDWKSSIVRAAMGVQES---GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA------------ 102 (291)
T ss_dssp GCSHHHHHHHHHTTCCCEEEEEEECSST---TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG------------
T ss_pred ccCHHHHHHHHHhcCCCEEEEecccccc---CCcccCcHHHHHHHHHHHHHHHHCCCeEeeeeccCCC------------
Confidence 56799999998 5899999999965311 1111223458999999999999999999999997532
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCC
Q 009560 304 GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNAD 383 (532)
Q Consensus 304 g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~ 383 (532)
....+++.++|+.+++|||++|.|+ |||+|||... ...+.+..++++++++||+++|+++|++++.....+
T Consensus 103 -------~~~~~~~~~~w~~la~ryk~~p~v~-~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~ 173 (291)
T d1egza_ 103 -------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQN 173 (291)
T ss_dssp -------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCccee-eeeccCcCCC-cchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 3567889999999999999999985 9999999874 356689999999999999999999999875322233
Q ss_pred chhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC-CCCCHHHHH
Q 009560 384 PLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV-TSGTQKDYQ 462 (532)
Q Consensus 384 ~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~-~~a~~~~~~ 462 (532)
.......+..++|+||++|+|.+++.. ...+.. . .....+.||+|||||+.... ..+. ..
T Consensus 174 ~~~~~~~~~~~~n~vys~H~Y~~~~~~-----------~~~~~~----~-~~~~~~~Pv~vgEfG~~~~~~~~~~---~~ 234 (291)
T d1egza_ 174 VDEASRDPINAKNIAYTLHFYAGTHGE-----------SLRNKA----R-QALNNGIALFVTEWGTVNADGNGGV---NQ 234 (291)
T ss_dssp HHHHHTSCCCSSSEEEEEEEETTTCCH-----------HHHHHH----H-HHHHTTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhhcccCCCcEEEEecccCCCCch-----------hHHHHH----H-HHHHcCCCeEecccCCcccCCCCCc---CH
Confidence 333333345678999999999985431 111111 1 12235789999999975321 1111 23
Q ss_pred HHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 463 DFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 463 ~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
.++++.++.+++.++||++|+|++.+..|+
T Consensus 235 ~~~~~~~~~~~~~~i~w~~W~~~~~~~~~~ 264 (291)
T d1egza_ 235 TETDAWVTFMRDNNISNANWALNDKNEGAS 264 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSSTTC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeeCCCCCee
Confidence 456677788899999999999996444444
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.97 E-value=7.6e-31 Score=263.03 Aligned_cols=230 Identities=17% Similarity=0.185 Sum_probs=171.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+++|+.||++|+|+||||+.+. ..+..+.++.++++|++|.++||+||||+|..++.+++
T Consensus 35 ~~~~~~i~~~G~N~VRl~~~~~--------~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~------------ 94 (302)
T d1bqca_ 35 TQAFADIKSHGANTVRVVLSNG--------VRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ------------ 94 (302)
T ss_dssp TTHHHHHHHTTCSEEEEEECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS------------
T ss_pred HHHHHHHHhcCCCEEEEecccc--------cccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCC------------
Confidence 5789999999999999999652 24556689999999999999999999999987664432
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC-CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT-VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLE 386 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~-~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~ 386 (532)
.++...+++.++|+++++||+++|.+++|||+|||.... ...+.+..++++++++||+.+|+++|+++...+..+...
T Consensus 95 -~~~~~~~~~~~~w~~ia~~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~ 173 (302)
T d1bqca_ 95 -SGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTN 173 (302)
T ss_dssp -TTCCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTC
T ss_pred -CchHHHHHHHHHHHHHHHHhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchh
Confidence 124568899999999999999999999999999997642 134678999999999999999999999986433333211
Q ss_pred h-------hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHH
Q 009560 387 L-------YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQK 459 (532)
Q Consensus 387 ~-------~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~ 459 (532)
. ....+..+|++|++|+|.++... . .+.+ .+.... ..+.|++|||||+.......
T Consensus 174 ~~~~~~~~~~~~~~~~~~vy~~H~Y~~~~~~------~----~~~~----~~~~~~-~~~~Pv~vgEfG~~~~~~~~--- 235 (302)
T d1bqca_ 174 TMRNNADQVYASDPTGNTVFSIHMYGVYSQA------S----TITS----YLEHFV-NAGLPLIIGEFGHDHSDGNP--- 235 (302)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEEEESGGGCSH------H----HHHH----HHHHHH-HHTCCEEEEEECCTTSTTCC---
T ss_pred hhccchhccccCCcccceEEEeeecCCCCCH------H----HHHH----HHHHhh-hcCCcEEEEecCCcCCCCcH---
Confidence 1 11125678999999999986431 1 1111 112222 23689999999986543222
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCchHhhHhCC
Q 009560 460 DYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNN 500 (532)
Q Consensus 460 ~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws~~~~~~~g 500 (532)
+.+++++.++++++||++|+|+.+.+.|++..+..++
T Consensus 236 ----~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~~~ 272 (302)
T d1bqca_ 236 ----DEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYNF 272 (302)
T ss_dssp ----CHHHHHHHHHHHTCEEEESCSSCCCTTTGGGCSBGGG
T ss_pred ----HHHHHHHHHHHcCCeEEEEEecCCCCCcchhhccCCC
Confidence 2344555666788999999999887788877655543
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.92 E-value=2e-24 Score=219.22 Aligned_cols=257 Identities=12% Similarity=0.089 Sum_probs=167.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC--CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC-------
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD--PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH------- 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~--~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~------- 298 (532)
+++|+.||++|+|+|||++.++....+. .+..+++..++.||+++++|.++||+||+|+|..++...+.+.
T Consensus 42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~ 121 (370)
T d1rh9a1 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQ 121 (370)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCccccccccc
Confidence 7899999999999999987543322221 1235677899999999999999999999999976543211100
Q ss_pred CC--CCCCCCCCCChhhHHHHHHHHHHHHHH--------hCCCCcEEEEEeccCCCCC-CCCcccHHHHHHHHHHHHHhh
Q 009560 299 SA--SRDGTTDWPASDYISQTLDVIDFLASR--------YAKHPALLGIELLNEPSAA-TVPLDILVPYYKQGYQIVRKY 367 (532)
Q Consensus 299 sg--~~~g~~~W~~~~~~~~~~~~w~~la~r--------y~~~p~v~g~EL~NEP~~~-~~~~~~l~~~~~~~~~aIR~~ 367 (532)
.+ .......|.++...+.+.+.++.+++| |+++|.|++||+.|||... ..+.+.+.+|+++++++||+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~ 201 (370)
T d1rh9a1 122 RGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSI 201 (370)
T ss_dssp TTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHhh
Confidence 00 011223456788899999999999987 5899999999999999764 235678999999999999999
Q ss_pred CCCcEEEEeCC-CCCCCchhhh-----------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHH
Q 009560 368 SPTAYVIVCQR-IGNADPLELY-----------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN 435 (532)
Q Consensus 368 ~~~~~Viv~~~-~~~~~~~~~~-----------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~ 435 (532)
+|+++|+++.. +......... .........++++|.|+.... ........... ............
T Consensus 202 dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~h~Y~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ 278 (370)
T d1rh9a1 202 DSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWL--PGLTQEAQDKW-ASQWIQVHIDDS 278 (370)
T ss_dssp CCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHHS--TTSCHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCCeEEEeccccccccccccCCCcccccccccccccCCcceEEEeccccCccc--cCCcchhhhhH-HHHHHHHHHHHH
Confidence 99999988642 1110000000 000112345799999964211 11111111111 122222333345
Q ss_pred hcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHH----HHHHh--CCCcEEEEcccCC
Q 009560 436 NANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQL----EVYNA--ASFGWAYWTLKND 487 (532)
Q Consensus 436 ~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql----~~~~~--~~~Gw~yW~~k~e 487 (532)
+..++||+|||||......+.+...+..+.+... ..... ...||+||+|+++
T Consensus 279 ~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~ 336 (370)
T d1rh9a1 279 KMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQ 336 (370)
T ss_dssp HHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCT
T ss_pred HhCCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEeeecCC
Confidence 5557899999999876655555555444443322 23322 3368999999987
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.92 E-value=7.1e-25 Score=221.67 Aligned_cols=244 Identities=18% Similarity=0.168 Sum_probs=161.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCC-------------CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDP-------------PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQN 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~-------------~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn 294 (532)
+++|+.|+++|+|+|||++......++.+ ...+.+..++.||+++++|+++||+||||+|..++...
T Consensus 39 ~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~ 118 (344)
T d1qnra_ 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccc
Confidence 89999999999999999765432222211 12355678999999999999999999999998765432
Q ss_pred CCC---CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 295 GME---HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 295 ~~~---~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
+.. ..........|.++..++.+.++|+.+++||+++|+|++|+|.|||.....+...+..++++++++||+.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~~~ 198 (344)
T d1qnra_ 119 GINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNH 198 (344)
T ss_dssp HHHHHHHHHCSCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSSS
T ss_pred cccccccccccccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCCCC
Confidence 211 00001122235578889999999999999999999999999999998766667789999999999999999999
Q ss_pred EEEEeCC-CCCCCc-----------hhhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCC
Q 009560 372 YVIVCQR-IGNADP-----------LELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANG 439 (532)
Q Consensus 372 ~Viv~~~-~~~~~~-----------~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g 439 (532)
+|+++.. ...... ..+.........+++++|.|+... .. ........+. ......+..+
T Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~~~H~Y~~~~---~~-~~~~~~~~~~-----~~~~~~~~~~ 269 (344)
T d1qnra_ 199 LVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSW---GT-NYTWGNGWIQ-----THAAACLAAG 269 (344)
T ss_dssp EEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHH---TC-CSTHHHHHHH-----HHHHHHHHTT
T ss_pred EEEEccccccccccccccccccccccchhhcccCCCceEEEEeecCccc---cc-chhHHHHHHH-----HHHHHHhhcC
Confidence 9988642 211100 011111122334589999996411 11 1111111221 1223344567
Q ss_pred CcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 440 PLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 440 ~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+||+|||||+..+ .......+... ....+...|++||+|..
T Consensus 270 kPv~v~EfG~~~~----~~~~~~~~~~~--~~~~~~~~G~~~W~~~~ 310 (344)
T d1qnra_ 270 KPCVFEEYGAQQN----PCTNEAPWQTT--SLTTRGMGGDMFWQWGD 310 (344)
T ss_dssp SCEEEEEECCSSC----HHHHHHHHHHH--HHTSTTEEEEEESCEEC
T ss_pred CCEEEEecCcCCC----CCccHHHHHHH--HHhccCcceEEEEEcCc
Confidence 8999999998532 11222222221 12234667999999976
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.9e-24 Score=189.06 Aligned_cols=110 Identities=27% Similarity=0.411 Sum_probs=98.1
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecC-CeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSE-SEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFE 146 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~-~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~ 146 (532)
||+||+ .||||||||+|| .|+|||+.++.||+|+|+...+ +.++||+.+|+||+++..|. |+|+++++++||+|+
T Consensus 3 qv~l~~-~ngkyvsa~~G~--~v~An~~~~~~~e~F~le~~~~~~~~~Lr~~~gkyl~~~~~g~-v~a~~~~~~~~e~F~ 78 (123)
T d1dfca3 3 QVVLQA-ANERNVSTRQGM--DLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGG-VQSTASSKNASCYFD 78 (123)
T ss_dssp EEEEEC-TTSCEEEC---C--BCEEEECCCSGGGCEEEEECTTTCCEEEEETTTEEEEECTTSB-EEEEESSCCGGGCBE
T ss_pred eEEEEe-cCCCEEEEcCCC--EEEecccccCCcceEEEEECCCCCEEEEEeCCCCEEEEcCCCc-EEEccccCCCceEEE
Confidence 899998 799999999975 5999999999999999887554 56999999999999998886 999999999999999
Q ss_pred EEEcCCCcEEEEecCCceEEeccCceEEeCCCCCCC
Q 009560 147 IERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMPG 182 (532)
Q Consensus 147 ~v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~~ 182 (532)
|+.+ +++|+||+.||+||++++++.|.|+....+.
T Consensus 79 ~~~~-~g~~alra~nG~yl~a~~~G~l~a~~~~~g~ 113 (123)
T d1dfca3 79 IEWR-DRRITLRASNGKFVTSKKNGQLAASVETAGD 113 (123)
T ss_dssp EEEE-TTEEEEECTTSSBCEECSSSBEESCCSSCCS
T ss_pred EEEe-CCeEEEEeCCCCEEEeCCCCEEEEccCCCCC
Confidence 9999 7899999999999999999999999876554
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.89 E-value=2.9e-22 Score=208.23 Aligned_cols=239 Identities=16% Similarity=0.195 Sum_probs=161.8
Q ss_pred CCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCC
Q 009560 226 ITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRD 303 (532)
Q Consensus 226 ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~ 303 (532)
.+++.|+.||++|+|+||||| |+..... ...++.. ..++++++++++|+++||+||||+|..++ |.+++...
T Consensus 39 ~~~d~~~~lk~~G~n~VRl~v-w~~~~~~-~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~----wadp~~q~ 112 (387)
T d1ur4a_ 39 KKQDIFKTLKEAGVNYVRVRI-WNDPYDA-NGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDF----WADPAKQK 112 (387)
T ss_dssp CBCCHHHHHHHTTCCEEEEEE-CSCCBCT-TCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSS----CCSSSCCC
T ss_pred CcccHHHHHHHcCCCEEEeec-ccCCccc-ccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCC----CcCCCCCC
Confidence 356789999999999999999 5433222 2233332 36999999999999999999999998654 33444444
Q ss_pred CCCCCCCh---hhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC---CCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 304 GTTDWPAS---DYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT---VPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 304 g~~~W~~~---~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~---~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
.+..|.+. +..+...++.+.+.+++++.+ .+..|||.|||.... .+.+.+.+++++++++||+.+|+..|+++
T Consensus 113 ~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~ 192 (387)
T d1ur4a_ 113 APKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALH 192 (387)
T ss_dssp CCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 45567653 344555556566666666554 466799999998642 35678999999999999999999999887
Q ss_pred CC-CCCCCc-hhhhhc--cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC
Q 009560 377 QR-IGNADP-LELYQA--NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN 452 (532)
Q Consensus 377 ~~-~~~~~~-~~~~~~--~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~ 452 (532)
.. ..+... ..+.+. ....+..++.+|+|+.++.. .. .+. ..+..+.+..++||+|+|++..++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~~-----~~----~~~----~~l~~l~~~~~k~v~v~E~~~~~t 259 (387)
T d1ur4a_ 193 FTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHGT-----LK----NLT----SVLTSVADTYGKKVMVAETSYTYT 259 (387)
T ss_dssp ECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSCC-----HH----HHH----HHHHHHHHHHCCEEEEEEECCCSC
T ss_pred ccCccchHHHHHHHHHHHhcCCCcccccceeecccCcc-----HH----HHH----HHHHHHHHHhCCceEEEEeccccc
Confidence 42 222221 223332 14567899999999876432 11 111 223344455578999999986543
Q ss_pred C------------------CCCCHHHHHHHHHHHHHHHHh---CCCcEEEEc
Q 009560 453 V------------------TSGTQKDYQDFGSAQLEVYNA---ASFGWAYWT 483 (532)
Q Consensus 453 ~------------------~~a~~~~~~~~~~~ql~~~~~---~~~Gw~yW~ 483 (532)
. ..++.+....|++...++... .++|++||.
T Consensus 260 ~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWe 311 (387)
T d1ur4a_ 260 AEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 311 (387)
T ss_dssp SCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred CCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 1 123556666677766665543 478999994
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.89 E-value=1.4e-23 Score=209.57 Aligned_cols=235 Identities=15% Similarity=0.090 Sum_probs=156.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC-----CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD-----PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR 302 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~-----~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~ 302 (532)
++||+.||++|+|+||||+.++....+. .+..+++..++.+|+++++|+++||+||+|+|..++.+++..+.
T Consensus 45 ~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~--- 121 (350)
T d2c0ha1 45 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL--- 121 (350)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHH---
T ss_pred HHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCccc---
Confidence 8999999999999999999875433321 11234567899999999999999999999999987655432211
Q ss_pred CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCC---------------------------CCcccHHH
Q 009560 303 DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAAT---------------------------VPLDILVP 355 (532)
Q Consensus 303 ~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~---------------------------~~~~~l~~ 355 (532)
....|.++...+.+.++|+++++||+++|+|++|||.|||.... .....+..
T Consensus 122 -~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (350)
T d2c0ha1 122 -NGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIGR 200 (350)
T ss_dssp -HHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHHH
T ss_pred -CcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHHH
Confidence 01123345667888999999999999999999999999997411 12345788
Q ss_pred HHHHHHHHHHhhCCCcEEEEeC-CCC-------CCCc---hhhh--hccCCCCcEEEEeeecccCCCccccCChhhhHHH
Q 009560 356 YYKQGYQIVRKYSPTAYVIVCQ-RIG-------NADP---LELY--QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILF 422 (532)
Q Consensus 356 ~~~~~~~aIR~~~~~~~Viv~~-~~~-------~~~~---~~~~--~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~ 422 (532)
++..++.+||+.+|+++|.++. ... .... ..+. .........+++.|.|...............
T Consensus 201 ~~~~~~~~i~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~~~~~--- 277 (350)
T d2c0ha1 201 FVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKHS--- 277 (350)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTSSC---
T ss_pred HHHHHHHHHHHhCCCceEEecccccCcCcccccccccccccccchhhcccccccceeccccCCCCCcchhhhhHHHH---
Confidence 9999999999999999988753 110 0000 1111 1113345568999999864332111111000
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 423 IYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 423 i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
......++|++|||||+.... +..... +++. ++.....|+++|+|..
T Consensus 278 ----------~~~~~~~kPv~igEfg~~~~~-~~~~~~---~~~~---~~~~~~~G~~~W~~~d 324 (350)
T d2c0ha1 278 ----------FSNFRLKKPMVIGEFNQEHGA-GMSSES---MFEW---AYTKGYSGAWTWSRTD 324 (350)
T ss_dssp ----------GGGGCCSSCEEEEECCGGGST-TCCHHH---HHHH---HHHTTCSEEEESCSSS
T ss_pred ----------HHhccCCCcEEEEecCCCCCC-CccHHH---HHHH---HHHhCCeEEEEEeeec
Confidence 012245789999999986542 222222 2222 2334557999999986
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.88 E-value=6.8e-22 Score=201.90 Aligned_cols=293 Identities=11% Similarity=0.092 Sum_probs=176.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccc---------cCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA---------FDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEH 298 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~---------~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~ 298 (532)
++||+.||++|+|+||+++.+... .++ .++.+++..++.+|+++++|+++||+||+|+|..+....+.+.
T Consensus 44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~-~~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~ 122 (410)
T d1uuqa_ 44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTN-GFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 122 (410)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBS-STTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCcccccccccccCCCccc-ccccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCccc
Confidence 799999999999999998765322 112 2346778899999999999999999999999987543321100
Q ss_pred -----CCCCCC---------------CCCCCChhhHHHHHHHHHHHHHH--------hCCCCcEEEEEeccCCCCCCC--
Q 009560 299 -----SASRDG---------------TTDWPASDYISQTLDVIDFLASR--------YAKHPALLGIELLNEPSAATV-- 348 (532)
Q Consensus 299 -----sg~~~g---------------~~~W~~~~~~~~~~~~w~~la~r--------y~~~p~v~g~EL~NEP~~~~~-- 348 (532)
.+.... ...+..+..++.+.+.++.+++| ++++|.|++|+|.|||.....
T Consensus 123 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~ 202 (410)
T d1uuqa_ 123 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 202 (410)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred ccccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcc
Confidence 000000 00122466788899999999987 789999999999999986432
Q ss_pred ---CcccHHHHHHHHHHHHHhhCCCcEEEEeCC-CC-C-CCchhhhhccCCCCcEEEEeeecccCCCccccCChhhhH--
Q 009560 349 ---PLDILVPYYKQGYQIVRKYSPTAYVIVCQR-IG-N-ADPLELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNI-- 420 (532)
Q Consensus 349 ---~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~-~~-~-~~~~~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i-- 420 (532)
..+.+..+++.++++||+.+|+++|+++.. .. . .....+..........++++|+|+...............
T Consensus 203 ~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~ 282 (410)
T d1uuqa_ 203 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPS 282 (410)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHH
T ss_pred cccchhhhhHHHHHHHhhhhhcCCCceEeecccccccccccccchhhhccCCccceEEeecCcccccccccccccccccc
Confidence 235688899999999999999999987642 11 1 111222222233456789999997532221111111111
Q ss_pred --HHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC----CCHHH----HHHHHHHHHHHHHh--CCCcEEEEcccCC-
Q 009560 421 --LFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS----GTQKD----YQDFGSAQLEVYNA--ASFGWAYWTLKND- 487 (532)
Q Consensus 421 --~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~----a~~~~----~~~~~~~ql~~~~~--~~~Gw~yW~~k~e- 487 (532)
.... ........+.+..++|++|+|||....... ...+. ...+++++...+.. ...|+++|+|+..
T Consensus 283 ~~~~~~-~~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 361 (410)
T d1uuqa_ 283 AWEKAQ-NYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYG 361 (410)
T ss_dssp HHHHHH-HHHHHHHHHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETC
T ss_pred hhhhhH-HHHHHHHHHHhhcCCCeeeeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCC
Confidence 1111 111222334455678999999997643211 11111 23444554444443 3479999999875
Q ss_pred ----CCC-CchHhhHhCCcccCCCCCCcceeechhhHHHHH
Q 009560 488 ----RKH-WDFEWNIRNNYLQLGNSPNMQIFNSLVLLGIIF 523 (532)
Q Consensus 488 ----~~~-Ws~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~ 523 (532)
... |.. ....-|..|....=...++|.++.+.-++
T Consensus 362 ~~~~~~~~~~~-~~~~~g~~p~~~~~~~~~~~~d~~~~~~~ 401 (410)
T d1uuqa_ 362 RTTRANYWWQE-GDDFMGDPPQEEQGMYGVFDTDTSTIAIM 401 (410)
T ss_dssp CCCCTTCCCCT-TSCCCSSCTTSCTTSSCEETTCHHHHHHH
T ss_pred CCCCCCCCCCC-CCCCCCCCCcccCceEEEECCCCcHHHHH
Confidence 111 221 11111222221111134788888766554
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=9.6e-22 Score=173.92 Aligned_cols=111 Identities=21% Similarity=0.287 Sum_probs=95.5
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEec----CCeEEEEecCCeEEEEeCCCceEEEeecCCCCC
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVS----ESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTP 142 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~----~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~ 142 (532)
.++.|+| .+|||||||.+|+ .|+|||++++.||+|+|+++. ++++.||+++|+||+++.+|. |+|++++|++|
T Consensus 5 ~~~gl~~-~~gkYltAe~~G~-~v~a~~~~~~~~e~w~le~~~~~~~~~~v~Lrs~~Gkylsa~~~g~-v~a~~~~~~~~ 81 (133)
T d1dfca1 5 IQFGLIN-CGNKYLTAEAFGF-KVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGN-VTCEREVPGPD 81 (133)
T ss_dssp CEECEEC-TTSCBCEECSSSS-CEECCCSSCCTTTCEECC--------CCBCCBCTTSCEEEECTTSC-EEEEESSCCGG
T ss_pred cEEeEEE-cCCcEEEEECCCC-EEEeeCCCCCCCcEEEEEEecCCCCCCEEEEEecCCCEEeeccCcc-eEEcCCCCCCC
Confidence 5788998 7999999999874 599999999999999988654 456999999999999998885 99999999999
Q ss_pred ceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCCCCC
Q 009560 143 ETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYPGMP 181 (532)
Q Consensus 143 e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~~~~ 181 (532)
|+|+++.++++++.||+ +||+||+++. +.|.|.....+
T Consensus 82 E~F~~~~~~dG~~~l~s~~nG~yl~~~~-~~l~a~~~~~~ 120 (133)
T d1dfca1 82 CRFLIVAHDDGRWSLQSEAHRRYFGGTE-DRLSCFAQTVS 120 (133)
T ss_dssp GCEECCBCSSSCBCCEETTTCCEEEEET-TEEEEEESSCC
T ss_pred cEEEEEECCCCEEEEEEcCCCcEEEecC-CceEEeCCCCC
Confidence 99999999889999998 7999999974 55888765443
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.81 E-value=4.3e-19 Score=180.45 Aligned_cols=233 Identities=17% Similarity=0.187 Sum_probs=162.2
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
+++-++.||++|+|+|||+| | .+|.++ ...+++++++++.|+++||+|+||+|..+. |..++....+.
T Consensus 29 ~~d~~~~lk~~G~n~VRlrv--W--~~p~~g----~~~~~~~~~~~~~a~~~Gm~vll~~hysd~----Wadp~~q~~P~ 96 (334)
T d1foba_ 29 TQALETILADAGINSIRQRV--W--VNPSDG----SYDLDYNLELAKRVKAAGMSLYLDLHLSDT----WADPSDQTTPS 96 (334)
T ss_dssp BCCHHHHHHHHTCCEEEEEE--C--SCCTTC----TTCHHHHHHHHHHHHHTTCEEEEEECCSSS----CCBTTBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee--e--eCCCCC----cCcHHHHHHHHHHHHHCCCEEEEEecCCCc----ccCCCcCCCcc
Confidence 35668889999999999999 4 355432 237999999999999999999999997643 44444444555
Q ss_pred CCCC---hhhHHHHHHHHHHHHHHhCCCCc-EEEEEeccCCCCC-------CCCcccHHHHHHHHHHHHHhhCCC--cEE
Q 009560 307 DWPA---SDYISQTLDVIDFLASRYAKHPA-LLGIELLNEPSAA-------TVPLDILVPYYKQGYQIVRKYSPT--AYV 373 (532)
Q Consensus 307 ~W~~---~~~~~~~~~~w~~la~ry~~~p~-v~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR~~~~~--~~V 373 (532)
.|.+ ++..+.+.+++++++++|++... +..+++.|||... ....+.+.++++.++++||+++++ ..|
T Consensus 97 aw~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i 176 (334)
T d1foba_ 97 GWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKI 176 (334)
T ss_dssp TSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEE
T ss_pred cccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccce
Confidence 6765 45678899999999999998754 4468999998752 134567899999999999999864 445
Q ss_pred EEeCCCCCCCc---hhhhh----cc--CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEE
Q 009560 374 IVCQRIGNADP---LELYQ----AN--IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFI 444 (532)
Q Consensus 374 iv~~~~~~~~~---~~~~~----~~--~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~v 444 (532)
+++...+ .+. ..+++ .. ...+..|+.+|+|+.++.. ..++.+. +.+..+.++.++||+|
T Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~-------~~l~~l~----~~l~~l~~~y~k~v~I 244 (334)
T d1foba_ 177 MIHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS-------ATLASLK----TSLANLQSTYDKPVVV 244 (334)
T ss_dssp EEEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT-------CCHHHHH----HHHHHHHHHHCCCEEE
T ss_pred eeecccC-CChhhhHHHHHHHHhcCCCCCCCcCeEEEecCCCCCCc-------ccHHHHH----HHHHHHHHHhCCceEE
Confidence 5543332 221 12222 11 1235579999999876421 1122222 2344455556789999
Q ss_pred eccCcccCCC-------------CCCHHHHHHHHHHHHHHHHh--CCCcEEEEc
Q 009560 445 GEWVNEWNVT-------------SGTQKDYQDFGSAQLEVYNA--ASFGWAYWT 483 (532)
Q Consensus 445 GEwG~~~~~~-------------~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~ 483 (532)
.|+|..++.+ .++.+...+|+.+++.+..+ .+.|.+||.
T Consensus 245 ~Et~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWe 298 (334)
T d1foba_ 245 VETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWE 298 (334)
T ss_dssp EECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred EEecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeC
Confidence 9999765421 25677778899888877643 578999995
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.80 E-value=1e-18 Score=175.66 Aligned_cols=261 Identities=14% Similarity=0.140 Sum_probs=167.7
Q ss_pred CHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCC
Q 009560 227 TIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTT 306 (532)
Q Consensus 227 te~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~ 306 (532)
+++.++.||++|||+||||| | .+|.++ ...|++++++++.|+++||+||||+|..|+. ...+....+.
T Consensus 29 ~~~~~~~lk~~G~n~VRi~v-W---~~p~~g----~~~~~~~~~~v~~a~~~gl~vil~~h~~~~w----a~~~~~~~p~ 96 (332)
T d1hjsa_ 29 AQPLENILAANGVNTVRQRV-W---VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW----ADPAHQTMPA 96 (332)
T ss_dssp BCCHHHHHHHTTCCEEEEEE-C---SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCSSSC----CBTTBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee-e---ecCCCC----ccCHHHHHHHHHHHHHCCCEEEEEecCCccc----cCccccCCCc
Confidence 46788899999999999998 5 355432 2369999999999999999999999998753 2223223334
Q ss_pred CCCC--hhhHHHHHHHHHHHHHHhCCCCcEE-EEEeccCCCCC-------CCCcccHHHHHHHHHHHHHhhCCC--cEEE
Q 009560 307 DWPA--SDYISQTLDVIDFLASRYAKHPALL-GIELLNEPSAA-------TVPLDILVPYYKQGYQIVRKYSPT--AYVI 374 (532)
Q Consensus 307 ~W~~--~~~~~~~~~~w~~la~ry~~~p~v~-g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR~~~~~--~~Vi 374 (532)
.|.. +...+...++|++++++||+....+ .+++.|||... ....+.+.++++.++++||+.+++ ..|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~ 176 (332)
T d1hjsa_ 97 GWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIM 176 (332)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCccee
Confidence 4543 3556788899999999999876544 46788888642 123457889999999999998754 4444
Q ss_pred EeCCCCCCCc---h----hhhhcc--CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEe
Q 009560 375 VCQRIGNADP---L----ELYQAN--IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIG 445 (532)
Q Consensus 375 v~~~~~~~~~---~----~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vG 445 (532)
++...+ .+. . .+.... ...+..++++|+|+.++.. .+.. .+... +..+.+..+.|++|.
T Consensus 177 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~~---~~~~----~~~~~----~~~~~~~~g~~v~i~ 244 (332)
T d1hjsa_ 177 IHLDNG-WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---ATLS----ALKSS----LDNMAKTWNKEIAVV 244 (332)
T ss_dssp EEESCT-TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CCHH----HHHHH----HHHHHHHHCCEEEEE
T ss_pred ecccCc-CchhhhhhHHHHHHhcCcccCCccceEeeeecCCCCCC---CCHH----HHHHH----HHHHHHHhCCceEEE
Confidence 443221 122 1 111111 2234589999999764321 1122 22222 223334447899999
Q ss_pred ccCcccCCC-------------CCCHHHHHHHHHHHHHHHHh--CCCcEEEEc--ccCC-CCCCchHhhHhCCcccC--C
Q 009560 446 EWVNEWNVT-------------SGTQKDYQDFGSAQLEVYNA--ASFGWAYWT--LKND-RKHWDFEWNIRNNYLQL--G 505 (532)
Q Consensus 446 EwG~~~~~~-------------~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~--~k~e-~~~Ws~~~~~~~g~~~~--~ 505 (532)
|+|..+... ..+.+...+|+++.+....+ .++|.+||. |.+. ...|+.. ..|++.. .
T Consensus 245 E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~~~~~~~~~~g~~~~---~~gLfd~~g~ 321 (332)
T d1hjsa_ 245 ETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEPAWIHNANLGSSCA---DNTMFSQSGQ 321 (332)
T ss_dssp ECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECTTCGGGTTTTSSSS---BCCSBCTTSB
T ss_pred EeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCCCCCCCccC---CCceECCCCC
Confidence 999754311 24666778888888777665 567999994 3332 3334432 2466654 4
Q ss_pred CCCCcceee
Q 009560 506 NSPNMQIFN 514 (532)
Q Consensus 506 ~~p~~~~~~ 514 (532)
+.|.+.+|.
T Consensus 322 ~~pa~~~f~ 330 (332)
T d1hjsa_ 322 ALSSLSVFQ 330 (332)
T ss_dssp BCGGGGGGG
T ss_pred CcHHHHHHh
Confidence 555555553
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.79 E-value=1.8e-19 Score=155.69 Aligned_cols=109 Identities=16% Similarity=0.227 Sum_probs=95.4
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEI 147 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~ 147 (532)
.+.||| .+||||+||.+ -+.++|...+.||.|+| +..+++++||+++|+||+++++|. |+|++++|+.||+|+|
T Consensus 3 ~~~lrs-~~gkyL~a~~~---~v~~~~~~~~~~~~F~v-e~~~g~iaLks~~GkYlsa~~~g~-l~~~~~~~~~~E~F~i 76 (118)
T d1hcda_ 3 NRAFKS-HHGHFLSAEGE---AVKTHHGHHDHHTHFHV-ENHGGKVALKTHCGKYLSIGDHKQ-VYLSHHLHGDHSLFHL 76 (118)
T ss_dssp CSEEES-STTCEEEEETT---EEEEECSCSSCCCCCEE-EEETTEEEEESSSSCEEEEEETTE-EEEECCCSSSSSSBEE
T ss_pred cEEeEc-CCCcEEeecCC---ceEeeCCCCCCCceEEE-EcCCCEEEEEeCCCCEEEecCCCc-EEEeccCCCCceEEEE
Confidence 468998 89999999965 47889999999999995 556799999999999999998885 9999999999999999
Q ss_pred EEcCCCcEEEEecCCceEEeccCceEEeC--CCCCCCC
Q 009560 148 ERNNDSRVHIKLKSGTYLQATLGNQLTSD--YPGMPGW 183 (532)
Q Consensus 148 v~~~~~~v~i~a~nG~~l~a~~~~~v~ad--~~~~~~W 183 (532)
+++ +++|+||+.||+||+++.++.+.++ ....+.|
T Consensus 77 e~~-~g~valrs~nGkylsa~~~g~v~~n~~~~~~~~W 113 (118)
T d1hcda_ 77 EHH-GGKVSIKGHHHHYISADHHGHVSTKEHHDHDTTF 113 (118)
T ss_dssp EEE-TTEEEEECSTTCEEEECGGGCEEEESSCSSTTCB
T ss_pred EEC-CCEEEEEeCCCCEEEEcCCCceeeEcCCCCCCCc
Confidence 998 7899999999999999998887654 4444445
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.69 E-value=9.8e-17 Score=168.11 Aligned_cols=307 Identities=16% Similarity=0.164 Sum_probs=189.7
Q ss_pred ceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccc
Q 009560 171 NQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVG 247 (532)
Q Consensus 171 ~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ 247 (532)
|.-||.||.|+.| +++ ||.|+......+. +..+...+.|.+.++.+ ++||+.|+++|+|++|++|.
T Consensus 8 G~atsa~QvEG~~~~~g~~~s~wd~~~~~~~~-----~~~~~~~~~a~d~y~~y------~eDi~ll~~lG~~~yRfsi~ 76 (426)
T d1ug6a_ 8 GVATSAYQIEGATQEDGRGPSIWDAFAQRPGA-----IRDGSTGEPACDHYRRY------EEDIALMQSLGVRAYRFSVA 76 (426)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTSTTS-----STTSCCSSSTTCHHHHH------HHHHHHHHHHTCCEEEEECC
T ss_pred EEEchHHHhcCCcCCCCCCcchhhhhhcCCCc-----ccCCCCCCcccchhhhh------HHHHHHHHHcCCCEEEccCC
Confidence 4456789999999 444 8999865433111 22334456788888777 99999999999999999999
Q ss_pred cccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHH
Q 009560 248 WWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASR 327 (532)
Q Consensus 248 ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~r 327 (532)
|..+ .|++.+.+++..+++++++|+.|+++||.+||+|||. +.+........|.+++..+.++++.+.++++
T Consensus 77 WsRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf-------d~P~~l~~~gGw~~~~~~~~F~~Ya~~v~~~ 148 (426)
T d1ug6a_ 77 WPRI-LPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHW-------DLPLALEERGGWRSRETAFAFAEYAEAVARA 148 (426)
T ss_dssp HHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHc-ccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEeccc-------ccchhhhccCccCCHHHHHHHHHHHHHHHHH
Confidence 8544 5554457788999999999999999999999999994 3332112234699999999999999999999
Q ss_pred hCCCCcEEEEEeccCCCCC----------CCCcccHHHH----------HHHHHHHHHhhCCCcEEEEeC-CCC-CCCc-
Q 009560 328 YAKHPALLGIELLNEPSAA----------TVPLDILVPY----------YKQGYQIVRKYSPTAYVIVCQ-RIG-NADP- 384 (532)
Q Consensus 328 y~~~p~v~g~EL~NEP~~~----------~~~~~~l~~~----------~~~~~~aIR~~~~~~~Viv~~-~~~-~~~~- 384 (532)
|++.... |-.+|||... .......... ...+++++|+..+....++.. .+. ..++
T Consensus 149 fgd~V~~--w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (426)
T d1ug6a_ 149 LADRVPF--FATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPE 226 (426)
T ss_dssp HTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCEECSCHH
T ss_pred hCcccce--EEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCceeEEeccCCCCccchH
Confidence 9998776 4599999530 0011122222 334667788877765544432 110 1111
Q ss_pred -hh---------hhhc------c-------------------CCCCcEEEEeeecccCCC-----cc-----------cc
Q 009560 385 -LE---------LYQA------N-------------------IGLHNIVVDLHYYNLFDT-----FF-----------VN 413 (532)
Q Consensus 385 -~~---------~~~~------~-------------------~~~~nvv~s~H~Y~~f~~-----~~-----------~~ 413 (532)
.+ ++.. + ....-..+.+.+|.+..- .. ..
T Consensus 227 ~~~~a~~~~~~~f~d~i~~g~yp~~~~~~~~~~~~~~~d~~~ik~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~ 306 (426)
T d1ug6a_ 227 AVDVADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATA 306 (426)
T ss_dssp HHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCCCTTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCT
T ss_pred HHHHHHHHhhhhcchHhhCCcchhHHhhcccCCCcchhHHHHhcCCcCccceeeEEeEEEecCCcccccccccCCCCccC
Confidence 00 0000 0 012346788888875310 00 00
Q ss_pred CChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC--C-C--CHHHH----HHHHHHHHHHHHh--CCCcEEEE
Q 009560 414 MSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT--S-G--TQKDY----QDFGSAQLEVYNA--ASFGWAYW 482 (532)
Q Consensus 414 ~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~--~-a--~~~~~----~~~~~~ql~~~~~--~~~Gw~yW 482 (532)
+.-+-...-+ ...+..+.+..+.||+|+|-|...... . . ..+.+ ..++++.+.+.+. .-.|.++|
T Consensus 307 ~gw~i~P~gl----~~~l~~~~~~y~~Pi~ITENG~~~~~~~~~~~~i~D~~Ri~yl~~~l~~~~~Ai~dGv~V~GY~~W 382 (426)
T d1ug6a_ 307 MGWEVYPEGL----YHLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 382 (426)
T ss_dssp TCCBCCHHHH----HHHHHHHHHHCSSCEEEEEECCCCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCeECccHh----HHHHHHHHHhcCCcEEEeecCCccCCCCCCccccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 0000001112 223344455556789999999864321 0 0 11223 3444555455443 34599999
Q ss_pred cccCCCCCCchHhhHhCCccc
Q 009560 483 TLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 483 ~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
++-. +-.|..--..+-|++-
T Consensus 383 Sl~D-n~EW~~Gy~~rfGL~~ 402 (426)
T d1ug6a_ 383 SLMD-NFEWAFGYTRRFGLYY 402 (426)
T ss_dssp CSBC-CCCGGGGGGSCCCSEE
T ss_pred Ccch-hcChhhcccCcCceEE
Confidence 9998 4456554445566653
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.4e-17 Score=140.43 Aligned_cols=102 Identities=19% Similarity=0.418 Sum_probs=86.1
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceEEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEI 147 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~ 147 (532)
+|.||. -+| |||++.+++ .|.|||+ .||+|+| +..+++++||+.|||||+++++|. |++.+++ .|.|.|
T Consensus 3 ~lvLrg-~~G-fv~~~~~~~-~l~~Nr~---~~e~F~l-~~~~g~y~lr~~~gkyw~~~~dG~-l~~~~~~---~~~F~l 71 (111)
T d1dfca4 3 IIVFRG-EHG-FIGCRKVTG-TLDANRS---SYDVFQL-EFNDGAYNIKDSTGKYWTVGSDSA-VTSSGDT---PVDFFF 71 (111)
T ss_dssp SBCCEE-TTE-EEEECSSSC-BEEEEES---SCCCBEE-EEETTEEEEECTTSCBCEECSSCB-EESCCSS---CCCBEE
T ss_pred EEEEEc-ccc-eEEecCCCC-eEEEcCC---CCcEEEE-EEcCCEEEEEcCCCCEEEEcCCCc-EEeCCCC---CCCEEE
Confidence 567774 455 888888764 5999995 6999996 678899999999999999999886 8777665 488999
Q ss_pred EEcCCCcEEEEecCCceEEeccCceEEeCCCCCC
Q 009560 148 ERNNDSRVHIKLKSGTYLQATLGNQLTSDYPGMP 181 (532)
Q Consensus 148 v~~~~~~v~i~a~nG~~l~a~~~~~v~ad~~~~~ 181 (532)
+.++++++.|++ ||+||+++.+|+|.|+.+...
T Consensus 72 e~~~~~~~~~~a-nGkYL~~~~~G~L~A~~~~~~ 104 (111)
T d1dfca4 72 EFCDYNKVAIKV-GGRYLKGDHAGVLKASAETVD 104 (111)
T ss_dssp EEEETTEEEEEE-TTEEEEECGGGBEEEEESSCC
T ss_pred EEeCCCEEEEcc-CCeEEEeCCCCeEEeCCCCCC
Confidence 999778999997 899999999999999987654
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.66 E-value=1.6e-16 Score=168.33 Aligned_cols=154 Identities=16% Similarity=0.199 Sum_probs=122.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| |++ +|+|+......+ ...++-.++.|.+.++.+ ++||+.|+++|+|+.|++|
T Consensus 10 wG~atsa~Q~EG~~~~~gk~~s~wd~~~~~~~-----~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 78 (464)
T d1gnxa_ 10 WGSATASYQIEGAAAEDGRTPSIWDTYARTPG-----RVRNGDTGDVATDHYHRW------REDVALMAELGLGAYRFSL 78 (464)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHTSTT-----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCSEEEEEC
T ss_pred EeeechHHHhccCcCCCCCcccHhhhhhcCCC-----cccCCCCCCcccchhhhh------HHHHHHHHHcCCCEEEccC
Confidence 45567889999999 444 899986543311 123445566788888887 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|+..+++++..+++++++|+.|+++||.+||+|||. +.+........|.+++..+.++++.+.+++
T Consensus 79 ~WsRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf-------dlP~~l~~~gGW~n~~~v~~F~~YA~~v~~ 150 (464)
T d1gnxa_ 79 AWPRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW-------DLPQELENAGGWPERATAERFAEYAAIAAD 150 (464)
T ss_dssp CHHHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTCTTSTHHHHHHHHHHHHHHH
T ss_pred CHHHc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecC-------ccHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Confidence 98654 5553457888999999999999999999999999994 443222234579999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCC
Q 009560 327 RYAKHPALLGIELLNEPS 344 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~ 344 (532)
||++.... |-.+|||.
T Consensus 151 ~fgd~Vk~--W~T~NEP~ 166 (464)
T d1gnxa_ 151 ALGDRVKT--WTTLNEPW 166 (464)
T ss_dssp HHTTTCCE--EEEEECHH
T ss_pred Hhccccce--eEEccCch
Confidence 99998766 45999995
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.65 E-value=3.7e-16 Score=164.69 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=135.6
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ +|.|+......+ .+.++-.++.|.+.++.+ ++|++.||++|+|+.|++|
T Consensus 11 wG~atsa~Q~EG~~~~~g~~~s~wd~~~~~~~-----~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 79 (447)
T d1e4ia_ 11 WGTATAAYQIEGAYQEDGRGLSIWDTFAHTPG-----KVFNGDNGNVACDSYHRY------EEDIRLMKELGIRTYRFSV 79 (447)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTSTT-----TSGGGCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeeechHHHhCCCcCCCCCccchhhhhhcCCC-----cccCCCCCCcccchhHhh------HHHHHHHHHhCCCEEEccC
Confidence 34567789999999 444 898886543211 123334456788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|.. +.|++.+++++..+++++++|+.|+++||++||+|||. +.+-.......|.+++..+.++++.+.+++
T Consensus 80 ~WsR-I~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~-------dlP~~l~~~gGw~n~~~~~~F~~Ya~~v~~ 151 (447)
T d1e4ia_ 80 SWPR-IFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW-------DLPQALQDAGGWGNRRTIQAFVQFAETMFR 151 (447)
T ss_dssp CHHH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTTTSSTHHHHHHHHHHHHHHH
T ss_pred CHHH-cccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeecc-------ccchhhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 9854 45665567889999999999999999999999999984 333211123479999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------C---CCcccHHHH----------HHHHHHHHHhhCCCcEEEE
Q 009560 327 RYAKHPALLGIELLNEPSAA-------T---VPLDILVPY----------YKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~---~~~~~l~~~----------~~~~~~aIR~~~~~~~Viv 375 (532)
+|++.... |-.+|||... + ......... ...+++++|+..+...|-+
T Consensus 152 ~fgdrV~~--W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi 218 (447)
T d1e4ia_ 152 EFHGKIQH--WLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGI 218 (447)
T ss_dssp HTBTTBCE--EEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred HhCCccce--EEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHHHHHHHHHhhhcceeee
Confidence 99997655 5599999641 0 011122333 3346777888888765544
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.65 E-value=5.8e-16 Score=162.92 Aligned_cols=184 Identities=13% Similarity=0.113 Sum_probs=135.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ ||+|+......+ .+.++-.++.|.+.++.+ ++||+.||++|+|+.|++|
T Consensus 10 wG~atsa~Q~EG~~~~~g~~~s~wd~~~~~~~-----~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfsi 78 (443)
T d2j78a1 10 WGVATASYQIEGSPLADGAGMSIWHTFSHTPG-----NVKNGDTGDVACDHYNRW------KEDIEIIEKLGVKAYRFSI 78 (443)
T ss_dssp EEEECCHHHHCCCTTGGGCCCBHHHHHHTSTT-----SSGGGCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeeechHHHhCcCcCCCCCCccHHHHhhcCCC-----cccCCCCCCccCchhhhh------HHHHHHHHHcCCCEEEccC
Confidence 34567789999999 444 899986543211 123344456788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|++.+.+++..+++++++|+.|+++||+++|+|||. +.+........|.+++..+.+.++.+.+++
T Consensus 79 ~WsRi-~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf-------~~P~wl~~~gGw~~~~~v~~F~~Ya~~v~~ 150 (443)
T d2j78a1 79 SWPRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW-------DLPFALQLKGGWANREIADWFAEYSRVLFE 150 (443)
T ss_dssp CHHHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTTHHHHHHHHHHHHHH
T ss_pred CHHHc-eeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCc-------cchhhhhhcCCccChHHHHHHHHHHHHHHH
Confidence 98654 5554467899999999999999999999999999994 333222223469999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------C---CCccc----------HHHHHHHHHHHHHhhCCCcEEE
Q 009560 327 RYAKHPALLGIELLNEPSAA-------T---VPLDI----------LVPYYKQGYQIVRKYSPTAYVI 374 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~---~~~~~----------l~~~~~~~~~aIR~~~~~~~Vi 374 (532)
||++....+ -.+|||... + ..... +.....++++++|+..++..|-
T Consensus 151 ~~gd~V~~w--~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~A~~~~~~~~~~~~vG 216 (443)
T d2j78a1 151 NFGDRVKNW--ITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIG 216 (443)
T ss_dssp HHTTTCCEE--EEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhCccccce--EeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHHHHHHhhhcccCCcee
Confidence 999987764 499999641 0 01111 2233455777888888775543
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.63 E-value=4.3e-16 Score=165.07 Aligned_cols=150 Identities=15% Similarity=0.211 Sum_probs=118.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| |++ ||+++...... .....+.|.+.++.+ ++||+.||++|+|+.|+++
T Consensus 11 wG~atsa~QiEG~~~~~gkg~s~wd~~~~~~---------~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 75 (468)
T d1pbga_ 11 FGGATAAYQAEGATHTDGKGPVAWDKYLEDN---------YWYTAEPASDFYHKY------PVDLELAEEYGVNGIRISI 75 (468)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHTT---------CSCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeeEChHHHhcCCcCCCCCccchhheeeccC---------CCCCCCccCchhhhh------HHHHHHHHHhCCCEEEccC
Confidence 34567789999999 444 89999765432 123346788888877 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|.+.+++++..+++++++|+.|+++||.++|+|||. +.+........|.+++..+.++++.+.+++
T Consensus 76 sWsRI-~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~-------dlP~~l~~~GGw~~~~~v~~F~~Ya~~~~~ 147 (468)
T d1pbga_ 76 AWSRI-FPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDFLNRENIEHFIDYAAFCFE 147 (468)
T ss_dssp CHHHH-STTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHH
T ss_pred CHHHc-CcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecc-------cchhhHhhcCccCCHHHHHHHHHHHHHHHH
Confidence 98654 4554457899999999999999999999999999994 443212223469999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCC
Q 009560 327 RYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~ 345 (532)
+|++. .. |-.+|||..
T Consensus 148 ~fgdv-k~--W~T~NEP~~ 163 (468)
T d1pbga_ 148 EFPEV-NY--WTTFNEIGP 163 (468)
T ss_dssp HCTTC-CE--EEEESCHHH
T ss_pred hcCCc-eE--EEEecCccc
Confidence 99763 33 669999974
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.61 E-value=1.8e-15 Score=159.48 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=134.4
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ +|+|+......+ ...++-.++.|.+.++.+ ++||+.||++|+|+.|++|
T Consensus 11 wG~atsa~Q~EG~~~~~g~g~s~wd~~~~~~~-----~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 79 (449)
T d1qoxa_ 11 WGVATAAYQIEGAYNEDGRGMSIWDTFAHTPG-----KVKNGDNGNVACDSYHRV------EEDVQLLKDLGVKVYRFSI 79 (449)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHSTT-----TSGGGCCTTTTTCTTSCH------HHHHHHHHHHTCSEEEEEC
T ss_pred eeeechHHHhCcCcCCCCCccchhhhhhcCCC-----cccCCCCCCcccchhhhh------HHHHHHHHHcCCCEEEccC
Confidence 34457789999999 344 899986543311 112333445666665555 9999999999999999999
Q ss_pred ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLAS 326 (532)
Q Consensus 247 ~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ 326 (532)
.|..+ .|++.+.+++..+++++++|+.|+++||.++|+|||. +.+........|.+++..+.+.++.+.+++
T Consensus 80 ~WsRi-~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~-------d~P~~l~~~gGw~~~~~~~~F~~Ya~~v~~ 151 (449)
T d1qoxa_ 80 SWPRV-LPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHW-------DLPQALQDQGGWGSRITIDAFAEYAELMFK 151 (449)
T ss_dssp CHHHH-STTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTHHHHHHHHHHHHHHH
T ss_pred CHHHc-ccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecc-------cccchhccccCcCCHHHHHHHHHHHHHHHH
Confidence 98654 5654457889999999999999999999999999994 433222234569999999999999999999
Q ss_pred HhCCCCcEEEEEeccCCCCC-------C---CCccc----------HHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 327 RYAKHPALLGIELLNEPSAA-------T---VPLDI----------LVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 327 ry~~~p~v~g~EL~NEP~~~-------~---~~~~~----------l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
+|++.... |-.+|||... + ..... +..-...+++++|+..++..|.+.
T Consensus 152 ~fgd~V~~--W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi~ 219 (449)
T d1qoxa_ 152 ELGGKIKQ--WITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIA 219 (449)
T ss_dssp HHTTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred Hhcccccc--eEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeeee
Confidence 99997665 5599999641 0 01112 222334566778888887665543
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.56 E-value=1.3e-15 Score=162.02 Aligned_cols=155 Identities=15% Similarity=0.192 Sum_probs=119.0
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ +|+|+......+ + .+.++-..+.|.+.++.+ ++||+.||++|+|+.|+++
T Consensus 19 wG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~--~--~~~~~~~~~~a~d~y~ry------~eDi~l~~~lG~~~yRfSi 88 (484)
T d1v02a_ 19 FGAATSAYQIEGAWNEDGKGPSTWDHFCHNFP--E--WIVDRSNGDVAADSYHMY------AEDVRLLKEMGMDAYRFSI 88 (484)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCG--G--GSTTSCCSSSTTCHHHHH------HHHHHHHHHTTCSEEEEEC
T ss_pred EeEEchHHHhCcCcCCCCCCccHHHHhhccCC--C--cccCCCCCCcccchhhhh------HHHHHHHHHhCCCEEEccC
Confidence 34456789999999 445 999986543200 0 012333446677788777 9999999999999999999
Q ss_pred ccccccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC-CCCCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR-DGTTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~-~g~~~W~~~~~~~~~~~~w~~ 323 (532)
.|..++ |+. ++++++..+++++++|+.++++||.+||+|||. +.+... +....|.+++..+.++++.+.
T Consensus 89 sWsRI~-P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hf-------d~P~~l~~~~Ggw~n~~~~~~F~~Ya~~ 160 (484)
T d1v02a_ 89 SWPRIL-PKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW-------DTPQALVDAYGGFLDERIIKDYTDFAKV 160 (484)
T ss_dssp CHHHHS-TTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHH
T ss_pred CHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCC-------cccceeeeecCcccCHHHHHHHHHhhHH
Confidence 996554 432 357899999999999999999999999999994 433211 123468899999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCC
Q 009560 324 LASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~ 344 (532)
+++||++....+ -.+|||.
T Consensus 161 v~~~fgd~V~~W--~T~NEP~ 179 (484)
T d1v02a_ 161 CFEKFGKTVKNW--LTFNEPE 179 (484)
T ss_dssp HHHHHTTTCCEE--EEEECHH
T ss_pred HHHHhcchhhce--EEecCcc
Confidence 999999987764 4999995
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.55 E-value=6.1e-15 Score=156.73 Aligned_cols=310 Identities=12% Similarity=0.136 Sum_probs=183.3
Q ss_pred ceEEeCCCCCCCC--CCC-CcceeeecccC-CCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 171 NQLTSDYPGMPGW--DDN-AATFEMAIVAN-NLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 171 ~~v~ad~~~~~~W--~~~-ps~f~~~~~~~-~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
|.-||.||.|++| +++ +|.++...... ..... ..++--++.|...++.+ ++|++.||++|+|+.|++|
T Consensus 11 G~Atsa~QiEG~~~~~~~~~s~wd~~~~~~~~~~~~--~~~~d~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSI 82 (489)
T d1uwsa_ 11 GWSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAG--LVSGDLPENGPGYWGNY------KTFHDNAQKMGLKIARLNV 82 (489)
T ss_dssp EEECCHHHHSCSSTTCCCCCBHHHHHHHCHHHHHHT--SSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred eEEchHHHhccCCCCCCCCCcchhhhhccCCcccCC--CCCCCccccchhHHHhH------HHHHHHHHHcCCCEEEecc
Confidence 4456778988888 333 77776432210 00000 01111234455566655 9999999999999999999
Q ss_pred ccccccCCCC---------------------------CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCC
Q 009560 247 GWWIAFDPDP---------------------------PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHS 299 (532)
Q Consensus 247 ~ww~~~~~~~---------------------------~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~s 299 (532)
.|..++ |++ .++.+++.+++++++|+.|+++||.++|+|||. +.+
T Consensus 83 ~WsRI~-P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~l~~~GIeP~VTL~H~-------dlP 154 (489)
T d1uwsa_ 83 EWSRIF-PNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHW-------PLP 154 (489)
T ss_dssp CHHHHC-CSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CCB
T ss_pred cHHhcC-cCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCccEEEEcCC-------CCc
Confidence 996554 432 134677899999999999999999999999994 333
Q ss_pred CCC-----------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC---------C---CCcc-----
Q 009560 300 ASR-----------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA---------T---VPLD----- 351 (532)
Q Consensus 300 g~~-----------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~---------~---~~~~----- 351 (532)
-.. .....|.+++..+.++++.+.++++|++....+. .+|||... . ....
T Consensus 155 ~~L~d~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~Wi--TiNEP~~~~~~gy~g~~~~~pp~~~~~~~~ 232 (489)
T d1uwsa_ 155 LWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDEYS--TMNEPNVVGGLGYVGVKSGFPPGYLSFELS 232 (489)
T ss_dssp TTTBCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSEEE--EEECHHHHHHHHHTCGGGCCTTCCCCHHHH
T ss_pred HHHHhhhhccccccccCCCcCCHHHHHHHHHHHHHHHHHhcCcceEEE--eeCCCcEEeecccccccCCCCcccCCHHHH
Confidence 221 1245799999999999999999999999877644 99999630 0 0111
Q ss_pred -----cHHHHHHHHHHHHHhhCCCcEEEE-eCC----CCCCCch----------hhh-h------cc----------CCC
Q 009560 352 -----ILVPYYKQGYQIVRKYSPTAYVIV-CQR----IGNADPL----------ELY-Q------AN----------IGL 394 (532)
Q Consensus 352 -----~l~~~~~~~~~aIR~~~~~~~Viv-~~~----~~~~~~~----------~~~-~------~~----------~~~ 394 (532)
.+.....++++++|+..+...-++ ... ....+.. .++ + .+ ...
T Consensus 233 ~~~~hn~l~Aha~a~~~~~~~~~~~igi~~~~~~~~p~~~~d~~a~~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~~ 312 (489)
T d1uwsa_ 233 RRAMYNIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKG 312 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSTTCHHHHHHHHHHHTHHHHHHHHHCEEC----CEECTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcceeEEeccchhhcchhHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhhhhccccC
Confidence 233334456677788776554233 211 1111110 000 0 00 112
Q ss_pred CcEEEEeeecccCC-----Ccc----------c-------cC--C-hhhh--HHHHHHHHHHHHHHHHhcCCCcEEEecc
Q 009560 395 HNIVVDLHYYNLFD-----TFF----------V-------NM--S-TVDN--ILFIYKSREAQLQALNNANGPLVFIGEW 447 (532)
Q Consensus 395 ~nvv~s~H~Y~~f~-----~~~----------~-------~~--~-~~~~--i~~i~~~~~~~~~~~~~~~g~pv~vGEw 447 (532)
.-..+.+-+|.... ... . +. + ..+. ..-++ ..+..+.++.++||+|+|-
T Consensus 313 ~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~----~~L~~~~~rY~~PI~ITEN 388 (489)
T d1uwsa_ 313 RLDWIGVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLY----DVLTKYWNRYHLYMYVTEN 388 (489)
T ss_dssp CCSEEEEEEEEEEEEEECSSSEEECTTSTTSSCSSSBCTTSCBBCTTCCBCCTHHHH----HHHHHHHHHHCCCEEEEEC
T ss_pred ccCcceecccchhhcccCCCcccccCccCcccccccccCCCCCcCcCCCccCchhhh----HHHHHHhhccCCCEEEecC
Confidence 33556666775421 000 0 00 0 0000 01122 2233344444789999999
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCccc
Q 009560 448 VNEWNVTSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 448 G~~~~~~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
|.....+.....-.+.+++++..+.+. .-.|.++|++-. +-.|..--..+-|++-
T Consensus 389 G~~~~~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~~ 445 (489)
T d1uwsa_ 389 GIADDADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLAD-NYEWASGFSMRFGLLK 445 (489)
T ss_dssp CCCCTTCSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBC-CCCGGGGGGSCCCSEE
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHcCCCEEEEeeccchh-hhChhhhhhccCceEE
Confidence 987543222233346677777777663 345999999987 4456554555666664
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.55 E-value=1.2e-14 Score=154.16 Aligned_cols=312 Identities=14% Similarity=0.169 Sum_probs=183.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| +++ +|.|+...... -...-...++-.++.|.+.++.+ ++|++.||++|+|+.|++|
T Consensus 9 wG~Atsa~QiEG~~~~~g~~~s~wd~~~~~~-~~~~~~~~~gd~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 81 (481)
T d1qvba_ 9 IGYSSSPFQFEAGIPGSEDPNSDWWVWVHDP-ENTAAGLVSGDFPENGPGYWNLN------QNDHDLAEKLGVNTIRVGV 81 (481)
T ss_dssp EEEECCHHHHSCCSTTCCCTTBHHHHHHHCH-HHHHHTSSCSCCGGGSCCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeEechHHHhcCCcCCCCCCCcceeeeeccC-CcccCCCcCCCCcccccchhhcc------HHHHHHHHHcCCCEEEccC
Confidence 34456779989888 444 78777543220 00000011222234555555555 9999999999999999999
Q ss_pred ccccccCCCCCC-----------------------------CCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCC
Q 009560 247 GWWIAFDPDPPA-----------------------------PFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGME 297 (532)
Q Consensus 247 ~ww~~~~~~~~~-----------------------------~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~ 297 (532)
.|..++ |.+.. ..+++.+++++++|+.++++||.++|+|||. +
T Consensus 82 ~WsRi~-P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~i~~l~~~GI~P~VTL~H~-------d 153 (481)
T d1qvba_ 82 EWSRIF-PKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHW-------P 153 (481)
T ss_dssp CHHHHC-SSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCS-------C
T ss_pred cHHhcC-cCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHHHHHHHHhCCeeEEEEecC-------C
Confidence 996554 33211 1366789999999999999999999999994 4
Q ss_pred CCCCCC------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----------CCC--cc--
Q 009560 298 HSASRD------------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----------TVP--LD-- 351 (532)
Q Consensus 298 ~sg~~~------------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----------~~~--~~-- 351 (532)
.+.... ....|.+++..+.++++.+.+++||++.... |-.+|||... ..+ ..
T Consensus 154 lP~~L~d~~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~~~~~gy~~~~G~~~Pg~~~~ 231 (481)
T d1qvba_ 154 LPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVM--WSTMNEPNVVYEQGYMFVKGGFPPGYLSL 231 (481)
T ss_dssp CBTTTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTSCSE--EEEEECHHHHHHHHHTCGGGCCTTCCCCH
T ss_pred CcHHHhhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHhcchhhe--eEecCCCcEEEeeccccccccCCCCccch
Confidence 433221 1347999999999999999999999998776 4499999530 001 11
Q ss_pred --------cHHHHHHHHHHHHHhhCCCcE-EEEeCCCCC--CCchh------------hhhc--------------cCCC
Q 009560 352 --------ILVPYYKQGYQIVRKYSPTAY-VIVCQRIGN--ADPLE------------LYQA--------------NIGL 394 (532)
Q Consensus 352 --------~l~~~~~~~~~aIR~~~~~~~-Viv~~~~~~--~~~~~------------~~~~--------------~~~~ 394 (532)
.+.....++++++|+..+... +++...+.. .++.+ +.+. ....
T Consensus 232 ~~~~~a~~~~l~AHa~A~~~~~~~~~~~igi~~~~~~~~~~~~~~~~~~~~~~~~~~~f~d~~~~g~~~~~~~~~~~i~~ 311 (481)
T d1qvba_ 232 EAADKARRNMIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRDLAN 311 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTTTSS
T ss_pred hhHhHHHHHHHHHHHHHHHHHhhcccCccceEEecccccccCCcHHHHHHHHHHhcccccchhhcCCcccCHHHHHHhhc
Confidence 122334456677888776542 223321110 01100 0000 0112
Q ss_pred CcEEEEeeecccCC----C-------ccc------cCC------h--hhhH--HHHHHHHHHHHHHHHhcCCCcEEEecc
Q 009560 395 HNIVVDLHYYNLFD----T-------FFV------NMS------T--VDNI--LFIYKSREAQLQALNNANGPLVFIGEW 447 (532)
Q Consensus 395 ~nvv~s~H~Y~~f~----~-------~~~------~~~------~--~~~i--~~i~~~~~~~~~~~~~~~g~pv~vGEw 447 (532)
.-..+.+-+|...- . .+. ... . .+.+ .-++ ..+..+.+..++||+|+|-
T Consensus 312 ~~DfiGiNyYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~----~~L~~~~~~Y~~Pi~ITEN 387 (481)
T d1qvba_ 312 RLDWLGVNYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGLY----LLLKELYNRYGVDLIVTEN 387 (481)
T ss_dssp CCSEEEEECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHHH----HHHHHHHHHHCCEEEEEEC
T ss_pred cCCccccccccceEEeccCCCccccccccccccCCCcCCCCCCCCccccccCcHHHH----HHHHHHHHhcCCCEEEECC
Confidence 23577777775421 0 000 000 0 0000 1122 2233444445789999999
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCchHhhHhCCccc
Q 009560 448 VNEWNVTSGTQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWDFEWNIRNNYLQ 503 (532)
Q Consensus 448 G~~~~~~~a~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws~~~~~~~g~~~ 503 (532)
|.....+....+-.++++++...+.+. .-.|.++|++-. +-.|..--..+-|++-
T Consensus 388 G~~~~~D~~Ri~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~~ 444 (481)
T d1qvba_ 388 GVSDSRDALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTD-NYEWAQGFRQKFGLVM 444 (481)
T ss_dssp CCCCTTCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGTTSSCCCSEE
T ss_pred CCCcccChHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchh-hhChhhcccccCceEE
Confidence 986432222233456677777777664 346999999987 4456544445556553
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.55 E-value=7e-15 Score=146.88 Aligned_cols=258 Identities=10% Similarity=0.055 Sum_probs=148.2
Q ss_pred HHHHHHH-HHcCCCEEEEccccccccCC----CCCCCCCcC-hHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFL-YRHGINTVRIPVGWWIAFDP----DPPAPFIGG-SLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSAS 301 (532)
Q Consensus 228 e~d~~~l-a~~G~N~VRIpv~ww~~~~~----~~~~~~~~~-~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~ 301 (532)
+++++.+ +++|++.||++-.|...... ....+-... .+..+|++++.|+++||++++.|...|+.........
T Consensus 23 ~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~yd~~~~D~~~~~~~~~g~~~~~~l~~~p~~~~~~~~~~- 101 (346)
T d1uhva2 23 IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEIGFMPKKLASGTQTV- 101 (346)
T ss_dssp HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEEECCCCTTTBSSCCEE-
T ss_pred HHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCcccChHhHHHHHHHHHHcCCCeEEEEeccCccccCCCCCc-
Confidence 3445444 67999999987432110000 000000000 3688999999999999999999998775322111100
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHhCCC-----CcEEEEEeccCCCCCC----CCcccHHHHHHHHHHHHHhhCCCcE
Q 009560 302 RDGTTDWPASDYISQTLDVIDFLASRYAKH-----PALLGIELLNEPSAAT----VPLDILVPYYKQGYQIVRKYSPTAY 372 (532)
Q Consensus 302 ~~g~~~W~~~~~~~~~~~~w~~la~ry~~~-----p~v~g~EL~NEP~~~~----~~~~~l~~~~~~~~~aIR~~~~~~~ 372 (532)
.........++..+.+.++++.+++||++. +.+..||+.|||.... .+.+.+.++++.++++||+++|+..
T Consensus 102 ~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~~~~~~~aik~~~P~~~ 181 (346)
T d1uhva2 102 FYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVNENLK 181 (346)
T ss_dssp TTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred ccccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHHHHHHHHHHhccCCCce
Confidence 000111124577889999999999999752 4567799999998642 3567788999999999999999988
Q ss_pred EEEeCCCCCCCc--hhhhhcc--CCCCcEEEEeeecccCCCccccC---ChhhhHHHHHHHHHHHHHHHHhc--CCCcEE
Q 009560 373 VIVCQRIGNADP--LELYQAN--IGLHNIVVDLHYYNLFDTFFVNM---STVDNILFIYKSREAQLQALNNA--NGPLVF 443 (532)
Q Consensus 373 Viv~~~~~~~~~--~~~~~~~--~~~~nvv~s~H~Y~~f~~~~~~~---~~~~~i~~i~~~~~~~~~~~~~~--~g~pv~ 443 (532)
|+..+..+.... ..++... ....-.++++|.|.......... ........+.......-..+... .+.|++
T Consensus 182 v~~~~~~~~~~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~ 261 (346)
T d1uhva2 182 VGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFKTVREIIKNSHFPNLPFH 261 (346)
T ss_dssp EEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHHHHHHHHHHTSSCTTCCEE
T ss_pred EeeccccCCccccHHHHHHHHHhcCCcccceeeecCCCCCCcCCccchhhhhhhhhhHHHHHHHHHHHHHhcCCCCccce
Confidence 765532221111 2222221 24456789999997532211100 00001111111111111112222 357899
Q ss_pred EeccCcccCCCC--CCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 444 IGEWVNEWNVTS--GTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 444 vGEwG~~~~~~~--a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
++|||....... .+......|+...+........+..+|++..
T Consensus 262 ~tE~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d 306 (346)
T d1uhva2 262 ITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 306 (346)
T ss_dssp EEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred eccccCCCCCCCCcccHHHHHHHHHHHHHHhcccccEEEEEEeec
Confidence 999998653211 1112234555555544444566888888775
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.54 E-value=3.4e-15 Score=128.52 Aligned_cols=78 Identities=17% Similarity=0.279 Sum_probs=68.5
Q ss_pred cceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCc-eEEEeecCCCCCce
Q 009560 66 GTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGC-VVSATAKSPSTPET 144 (532)
Q Consensus 66 g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~-~~~a~~~~~~~~e~ 144 (532)
|.+|+||| .+|||||++++| .|+|||++++.||+|++.+ ++++++||+.||+||+++++|. .+.+++++++.||+
T Consensus 40 ~g~iaLks-~~GkYlsa~~~g--~l~~~~~~~~~~E~F~ie~-~~g~valrs~nGkylsa~~~g~v~~n~~~~~~~~WE~ 115 (118)
T d1hcda_ 40 GGKVALKT-HCGKYLSIGDHK--QVYLSHHLHGDHSLFHLEH-HGGKVSIKGHHHHYISADHHGHVSTKEHHDHDTTFEE 115 (118)
T ss_dssp TTEEEEES-SSSCEEEEEETT--EEEEECCCSSSSSSBEEEE-ETTEEEEECSTTCEEEECGGGCEEEESSCSSTTCBEE
T ss_pred CCEEEEEe-CCCCEEEecCCC--cEEEeccCCCCceEEEEEE-CCCEEEEEeCCCCEEEEcCCCceeeEcCCCCCCCcee
Confidence 57899999 799999999876 6999999999999999665 5789999999999999998886 45566778889999
Q ss_pred EEE
Q 009560 145 FEI 147 (532)
Q Consensus 145 F~~ 147 (532)
|.|
T Consensus 116 f~i 118 (118)
T d1hcda_ 116 III 118 (118)
T ss_dssp ECC
T ss_pred EEC
Confidence 975
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=4e-13 Score=132.22 Aligned_cols=214 Identities=16% Similarity=0.161 Sum_probs=137.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+.. . + . . +.+.+.|.++||.|+.++..... ....
T Consensus 39 ~~d~~~~k~~G~N~iR~~~----~--~--~---~-------~~~~~~cD~~Gilv~~e~~~~~~------------~~~~ 88 (304)
T d1bhga3 39 VKDFNLLRWLGANAFRTSH----Y--P--Y---A-------EEVMQMCDRYGIVVIDECPGVGL------------ALPQ 88 (304)
T ss_dssp HHHHHHHHHHTCCEEECTT----S--C--C---S-------STHHHHHSTTCCEEEECCSCCCT------------TSSG
T ss_pred HHHHHHHHHcCCCEEEecC----C--C--C---h-------HHHHHHHHhcCCeeeeccccccc------------cccc
Confidence 7899999999999999842 1 1 1 1 14678899999999999875311 1112
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCCchhh
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGNADPLEL 387 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~~~~ 387 (532)
..++...+.+.+.++.+.+|++++|+|++|++.|||.. .......+.+.+.+.||+.||+++|..+...... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~---~~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~-~~~- 163 (304)
T d1bhga3 89 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYA-ADK- 163 (304)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCT---TSHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTT-TCS-
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCc---ccchhhhhhHHHHHHHHhhCCCCceeeecccccc-ccc-
Confidence 23467889999999999999999999999999999975 3455678889999999999999998876544211 111
Q ss_pred hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC-------CCCHHH
Q 009560 388 YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT-------SGTQKD 460 (532)
Q Consensus 388 ~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~-------~a~~~~ 460 (532)
....-.+++.|.|..+...... ..............+......|++++|+|...... ..+.+.
T Consensus 164 ----~~~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~ 233 (304)
T d1bhga3 164 ----GAPYVDVICLNSYYSWYHDYGH------LELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEY 233 (304)
T ss_dssp ----SGGGCSSEEEECCTTSSSSTTC------HHHHHHHHHHHHHHHHHHSCSCEEEEECCCCCCTTCCCSSCCSSCHHH
T ss_pred ----cccccccccccccccccccccc------hhhhhhhhhHHHHHhhccCCCCeEEecchhhcccccCCCcccccCHHH
Confidence 1122345777777543221111 11122222233334455567899999999753211 112232
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEcccC
Q 009560 461 YQDFGSAQLEVYNA----ASFGWAYWTLKN 486 (532)
Q Consensus 461 ~~~~~~~ql~~~~~----~~~Gw~yW~~k~ 486 (532)
...+++.....+.. ..+|-++|++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~G~~~w~~~D 263 (304)
T d1bhga3 234 QKSLLEQYHLGLDQKRRKYVVGELIWNFAD 263 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEESBC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeeeEe
Confidence 23333333222222 356889999875
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.52 E-value=2.9e-15 Score=159.44 Aligned_cols=155 Identities=12% Similarity=0.132 Sum_probs=118.7
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|+.| +++ ||+|+......+ . .+.+..+.+.|.+.++.+ ++|++.||++|+|+.|++|
T Consensus 25 wG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~-~---~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSi 94 (490)
T d1cbga_ 25 FGTASSAFQYEGAAFEDGKGPSIWDTFTHKYP-E---KIKDRTNGDVAIDEYHRY------KEDIGIMKDMNLDAYRFSI 94 (490)
T ss_dssp EEEECCHHHHCCCSSSTTCCCBHHHHHHHHCG-G---GSTTCCCSSSTTCHHHHH------HHHHHHHHHTTCCEEEEEC
T ss_pred EeeEChHHHhcCCcCCCCCccchhhhhhccCC-c---ccCCCCCCCcccchhhhh------HHHHHHHHHcCCCEEEccC
Confidence 34567789999999 444 899986543210 0 112333456788888777 9999999999999999999
Q ss_pred ccccccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC-CCCCCCCChhhHHHHHHHHHH
Q 009560 247 GWWIAFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR-DGTTDWPASDYISQTLDVIDF 323 (532)
Q Consensus 247 ~ww~~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~-~g~~~W~~~~~~~~~~~~w~~ 323 (532)
.|..+ .|+. .+++++..+++++++|+.|+++||.+||+|||. +.+-.. +....|.+++..+.++++.+.
T Consensus 95 ~WsRI-~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~Hf-------dlP~~l~~~~Ggw~n~~~~~~F~~Ya~~ 166 (490)
T d1cbga_ 95 SWPRV-LPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW-------DVPQALEDEYRGFLGRNIVDDFRDYAEL 166 (490)
T ss_dssp CHHHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTTHHHHHHHHHHH
T ss_pred CHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecC-------CChHHHhhcccccCCHHHHHHHHHHHHH
Confidence 98655 4442 347788999999999999999999999999994 333111 112357889999999999999
Q ss_pred HHHHhCCCCcEEEEEeccCCC
Q 009560 324 LASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 324 la~ry~~~p~v~g~EL~NEP~ 344 (532)
++++|++....+ -.+|||.
T Consensus 167 v~~~fgd~V~~W--~T~NEP~ 185 (490)
T d1cbga_ 167 CFKEFGDRVKHW--ITLNEPW 185 (490)
T ss_dssp HHHHHTTTCCEE--EEEECHH
T ss_pred HHHHhcCccceE--EEccCCc
Confidence 999999987764 4999985
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.48 E-value=6.4e-15 Score=155.68 Aligned_cols=156 Identities=13% Similarity=0.164 Sum_probs=120.3
Q ss_pred CceEEeCCCCCCCC--CCC-CcceeeecccCCCCccceeecccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcc
Q 009560 170 GNQLTSDYPGMPGW--DDN-AATFEMAIVANNLHGDYQLANGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPV 246 (532)
Q Consensus 170 ~~~v~ad~~~~~~W--~~~-ps~f~~~~~~~~~~~e~~l~~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv 246 (532)
.|.-||.||.|++| |++ ||+|+......+- ....+...+.|.+.++.+ ++||+.||++|+|+.|+++
T Consensus 9 wG~atsa~Q~EG~~~~dg~~~s~wd~~~~~~~~----~~~~~~~~~~a~d~y~ry------~eDi~l~~~lG~~~yRfSi 78 (462)
T d1wcga1 9 FGTSTASYQIEGGWNEDGKGENIWDRLVHTSPE----VIKDGTNGDIACDSYHKY------KEDVAIIKDLNLKFYRFSI 78 (462)
T ss_dssp EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG----GSTTSCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEEC
T ss_pred EeEEchHHHhcCCcCCCCCcccHHHHhhhcCCC----cccCCCCCCcccchhhhh------HHHHHHHHHhCCCEEEeeC
Confidence 34557789999999 444 8998865432110 012333446677888877 9999999999999999999
Q ss_pred ccccccCCCC-CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHH
Q 009560 247 GWWIAFDPDP-PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 247 ~ww~~~~~~~-~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la 325 (532)
.|..+ .|+. .+.+++..++.++++|+.|+++||.++|+|||. +.+........|.+++..+.++++.+.++
T Consensus 79 ~WsRI-~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf-------d~P~~l~~~GGW~~~~~v~~F~~Ya~~v~ 150 (462)
T d1wcga1 79 SWARI-APSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHW-------DLPQYLQDLGGWVNPIMSDYFKEYARVLF 150 (462)
T ss_dssp CHHHH-STTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTTHHHHHHHHHHHHH
T ss_pred cHHHc-ccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccc-------cchhhhhhcCCcccHHHHHHHHHHHHHHH
Confidence 98655 4542 457788999999999999999999999999994 44322222457999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCCC
Q 009560 326 SRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~~ 345 (532)
++|++....+ -.+|||..
T Consensus 151 ~~fgd~V~~W--~T~NEP~~ 168 (462)
T d1wcga1 151 TYFGDRVKWW--ITFNEPIA 168 (462)
T ss_dssp HHHTTTCCEE--EEEECHHH
T ss_pred Hhccccchhe--eeecCCce
Confidence 9999987764 49999963
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=3.9e-14 Score=122.77 Aligned_cols=89 Identities=19% Similarity=0.308 Sum_probs=75.7
Q ss_pred cccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceE
Q 009560 53 SLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVV 132 (532)
Q Consensus 53 ~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~ 132 (532)
..|+-+... ++..+.||+ .+|||||++..| .|+|+|+++++||+|++. ..+++++||+.||+||+++++|. |
T Consensus 33 e~F~le~~~---~~~~~~Lr~-~~gkyl~~~~~g--~v~a~~~~~~~~e~F~~~-~~~g~~alra~nG~yl~a~~~G~-l 104 (123)
T d1dfca3 33 ETFQLEIDR---DTKKCAFRT-HTGKYWTLTATG--GVQSTASSKNASCYFDIE-WRDRRITLRASNGKFVTSKKNGQ-L 104 (123)
T ss_dssp GCEEEEECT---TTCCEEEEE-TTTEEEEECTTS--BEEEEESSCCGGGCBEEE-EETTEEEEECTTSSBCEECSSSB-E
T ss_pred ceEEEEECC---CCCEEEEEe-CCCCEEEEcCCC--cEEEccccCCCceEEEEE-EeCCeEEEEeCCCCEEEeCCCCE-E
Confidence 356643333 356899997 899999998775 699999999999999965 55789999999999999998885 9
Q ss_pred EEeecCCCCCceEEEEE
Q 009560 133 SATAKSPSTPETFEIER 149 (532)
Q Consensus 133 ~a~~~~~~~~e~F~~v~ 149 (532)
.|++++|+.||.|.|.-
T Consensus 105 ~a~~~~~g~~e~f~i~l 121 (123)
T d1dfca3 105 AASVETAGDSELFLMKL 121 (123)
T ss_dssp ESCCSSCCSSSEEEEEE
T ss_pred EEccCCCCCceEEEEEE
Confidence 99999999999999864
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1e-14 Score=128.25 Aligned_cols=78 Identities=18% Similarity=0.388 Sum_probs=69.4
Q ss_pred ccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCc
Q 009560 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPE 143 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e 143 (532)
+++.|.||| .+|||||++.+| .|+|||+++++||+|++...++++++||+ .||+||++++++ |+|++.++++||
T Consensus 49 ~~~~v~Lrs-~~Gkylsa~~~g--~v~a~~~~~~~~E~F~~~~~~dG~~~l~s~~nG~yl~~~~~~--l~a~~~~~~~~e 123 (133)
T d1dfca1 49 GSAAVCLRS-HLGRYLAADKDG--NVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDR--LSCFAQTVSPAE 123 (133)
T ss_dssp --CCBCCBC-TTSCEEEECTTS--CEEEEESSCCGGGCEECCBCSSSCBCCEETTTCCEEEEETTE--EEEEESSCCGGG
T ss_pred CCCEEEEEe-cCCCEEeeccCc--ceEEcCCCCCCCcEEEEEECCCCEEEEEEcCCCcEEEecCCc--eEEeCCCCCCCe
Confidence 678999998 799999999876 69999999999999997777789999999 799999997543 999999999999
Q ss_pred eEEE
Q 009560 144 TFEI 147 (532)
Q Consensus 144 ~F~~ 147 (532)
.|.|
T Consensus 124 ~f~v 127 (133)
T d1dfca1 124 KWSV 127 (133)
T ss_dssp CBEE
T ss_pred eEEE
Confidence 9987
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.33 E-value=1.7e-12 Score=135.23 Aligned_cols=116 Identities=15% Similarity=0.181 Sum_probs=93.6
Q ss_pred hhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 212 ERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 212 ~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
+.|.+.++.+ ++||+.||++|+|+.|++|.|-.+ .|++ ++++++++++++++|+.++++||.+||+|||.
T Consensus 43 ~~a~d~y~ry------~eDi~ll~~lG~~~yRfSisWsRI-~P~~-g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~-- 112 (423)
T d1vffa1 43 GKACNHWELY------RDDIQLMTSLGYNAYRFSIEWSRL-FPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHF-- 112 (423)
T ss_dssp CCTTCHHHHH------HHHHHHHHHHTCCEEEEECCHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESS--
T ss_pred CCcCchHHhh------HHHHHHHHHhCCCEEEecCcHHHe-ecCC-CccChHHHHHHHHHHHHHHhcCCeeEEeecCC--
Confidence 3466677766 999999999999999999998554 5555 47799999999999999999999999999983
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 292 SQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
+.+........|.+++..+.+.++.+.+++++ +.... |-.+|||..
T Consensus 113 -----d~P~~l~~~gGw~~~~~v~~F~~Ya~~~~~~~-d~Vk~--W~T~NEP~~ 158 (423)
T d1vffa1 113 -----TSPLWFMKKGGFLREENLKHWEKYIEKVAELL-EKVKL--VATFNEPMV 158 (423)
T ss_dssp -----CCBHHHHHTTGGGSGGGHHHHHHHHHHHHHHT-TTCCE--EEEEECHHH
T ss_pred -----cchHHHHhhhhccCHHHHHHHHHHHHHHHHhh-cccce--eeccCCcce
Confidence 44322222356999999999999999998777 54443 669999974
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.32 E-value=3.2e-13 Score=143.81 Aligned_cols=155 Identities=10% Similarity=0.038 Sum_probs=116.8
Q ss_pred CceEEeCCCCCCCCCCCCcceeeecccCCCCccceee-cccChhhHHHHHHhhccccCCHHHHHHHHHcCCCEEEEcccc
Q 009560 170 GNQLTSDYPGMPGWDDNAATFEMAIVANNLHGDYQLA-NGYGHERAKEVLKRHRNTFITIEDFNFLYRHGINTVRIPVGW 248 (532)
Q Consensus 170 ~~~v~ad~~~~~~W~~~ps~f~~~~~~~~~~~e~~l~-~~~G~~~a~~~~~~hw~t~ite~d~~~la~~G~N~VRIpv~w 248 (532)
.|.-||.||.|+.|...+|+++......+ . ... ..-..+.|.+.++.+ ++||+.||++|+|+.|++|.|
T Consensus 29 wG~atsa~Q~EG~~gkg~s~wd~~~~~~~--~--~~~~~~~~~~~a~d~y~~y------~eDi~l~~~lG~~~yRfSI~W 98 (499)
T d1e4mm_ 29 FGVASSAYQIEGTIGRGLNIWDGFTHRYP--N--KSGPDHGNGDTTCDSFSYW------QKDIDVLDELNATGYRFSIAW 98 (499)
T ss_dssp EEEECCHHHHSCSTTSCCBHHHHHHHHSH--H--HHCTTCCCSSSTTCHHHHH------HHHHHHHHHHTCSEEEEECCH
T ss_pred EeeechHHHhCCCCCCCccHHhHHhhhcC--C--ccCCCCCCCCcccchHHHH------HHHHHHHHHhCCCEEEccCCH
Confidence 45567788988888555888886432100 0 000 111224677777777 999999999999999999999
Q ss_pred ccccCCCC--CCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCC-CCCCCCCChhhHHHHHHHHHHHH
Q 009560 249 WIAFDPDP--PAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASR-DGTTDWPASDYISQTLDVIDFLA 325 (532)
Q Consensus 249 w~~~~~~~--~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~-~g~~~W~~~~~~~~~~~~w~~la 325 (532)
..+ .|.. .+++++..+++++++|+.|+++||.++|+|||. +.+-.. +....|.+++..+.|+++.+.++
T Consensus 99 sRI-~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf-------dlP~~l~~~~GGW~~~~~~~~F~~YA~~v~ 170 (499)
T d1e4mm_ 99 SRI-IPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHW-------DLPQTLQDEYEGFLDPQIIDDFKDYADLCF 170 (499)
T ss_dssp HHH-CTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHHHHHHHHH
T ss_pred HHc-CcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecC-------chHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 655 4443 346788999999999999999999999999994 443211 12246999999999999999999
Q ss_pred HHhCCCCcEEEEEeccCCC
Q 009560 326 SRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 326 ~ry~~~p~v~g~EL~NEP~ 344 (532)
++|++....+. .+|||.
T Consensus 171 ~~fgd~Vk~W~--T~NEP~ 187 (499)
T d1e4mm_ 171 EEFGDSVKYWL--TINQLY 187 (499)
T ss_dssp HHHTTTCCEEE--EESCTT
T ss_pred HhhccccceeE--EccCce
Confidence 99999877644 999997
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.25 E-value=2.9e-11 Score=119.71 Aligned_cols=122 Identities=21% Similarity=0.305 Sum_probs=91.2
Q ss_pred hhccccCCHHHHHHHHHcCCCEEEEcc-ccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC-----
Q 009560 220 RHRNTFITIEDFNFLYRHGINTVRIPV-GWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQ----- 293 (532)
Q Consensus 220 ~hw~t~ite~d~~~la~~G~N~VRIpv-~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq----- 293 (532)
+||+.-.-++||+.||++|+|+||+++ .| ..++|.++ .+ .++.+|++|+.|+++||+|||+||+...-+
T Consensus 9 ~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W-~~iep~~G-~~---~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~~~ 83 (393)
T d1kwga2 9 EHWPKERWKEDARRMREAGLSHVRIGEFAW-ALLEPEPG-RL---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDR 83 (393)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCH-HHHCSBTT-BC---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEecccch-hhcCCCCC-cc---CHHHHHHHHHHHHHCCCEEEEEcCCCCCchhhhcc
Confidence 455443348999999999999999998 66 44566543 55 378999999999999999999999763110
Q ss_pred ----CCCCCCCCC-----CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC
Q 009560 294 ----NGMEHSASR-----DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA 346 (532)
Q Consensus 294 ----n~~~~sg~~-----~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~ 346 (532)
...+..|.. .....+.++..++.+.++++.++.+|++++.+..+++.|||...
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 84 YPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp CGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred CcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 000111111 11223456889999999999999999999999999999999864
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.19 E-value=4.5e-11 Score=121.33 Aligned_cols=144 Identities=16% Similarity=0.124 Sum_probs=104.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+++|+.||++|+|+||++|.| ...+|.++ .|+-..++.|+++|+.|+++||+|||.+..... ..|... +.+.
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~W-~~~ep~~g-~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~--~~w~~~----~~p~ 110 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVDW-ALLEGNPG-HYSAEGIFDLQPFFDAAKEAGIYLLARPGPYIN--AEVSGG----GFPG 110 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCC--TTBGGG----GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hccCCCCC-cccccchhhHHHHHHHHHHcCCEEEEcCCCCcC--cccccC----CCCc
Confidence 789999999999999999985 56677654 777778889999999999999999998763311 111111 1111
Q ss_pred C----------CChhhHHHHHHHHHHHHHH-----hCCCCcEEEEEeccCCCCCC--CCcccHHHHHHHHHHHHHhhCCC
Q 009560 308 W----------PASDYISQTLDVIDFLASR-----YAKHPALLGIELLNEPSAAT--VPLDILVPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 308 W----------~~~~~~~~~~~~w~~la~r-----y~~~p~v~g~EL~NEP~~~~--~~~~~l~~~~~~~~~aIR~~~~~ 370 (532)
| .++...+...++++.+.++ |+++|.|++|++-||..... .......++.+.+.+..|+.+..
T Consensus 111 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (354)
T d1tg7a5 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (354)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcc
Confidence 1 2456677777777777665 68899999999999986431 12234567777788888998888
Q ss_pred cEEEEeCCC
Q 009560 371 AYVIVCQRI 379 (532)
Q Consensus 371 ~~Viv~~~~ 379 (532)
.++...+.+
T Consensus 191 ~p~~~~~~~ 199 (354)
T d1tg7a5 191 VPFISNDAW 199 (354)
T ss_dssp SCBBCCBSS
T ss_pred cceEeccch
Confidence 776655544
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=99.05 E-value=3.6e-09 Score=104.59 Aligned_cols=214 Identities=17% Similarity=0.194 Sum_probs=130.6
Q ss_pred CCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCCCCCCCCCCCChhh
Q 009560 239 INTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCI---IDLHAAPGSQNGMEHSASRDGTTDWPASDY 313 (532)
Q Consensus 239 ~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VI---LDlH~~pGsqn~~~~sg~~~g~~~W~~~~~ 313 (532)
||.+-.. +- |...+|.++ .| .++.+|+++++|+++||+|. |=.|. +.. .....+..++.
T Consensus 37 fn~~t~~n~~k-W~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~----~~p-------~w~~~~~~~~~ 100 (302)
T d1nq6a_ 37 FGSVTPENEMK-WDAVESSRN-SF---SFSAADRIVSHAQSKGMKVRGHTLVWHS----QLP-------GWVSPLAATDL 100 (302)
T ss_dssp CSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEEEEEEEST----TCC-------TTTTTSCHHHH
T ss_pred CCeeeeccCcc-chhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEeecccccc----ccc-------ccccccchHHH
Confidence 8988874 33 455667654 34 47899999999999999985 22221 110 11112334577
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---cc-cH-----HHHHHHHHHHHHhhCCCcEEEEeCCCCCCC-
Q 009560 314 ISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LD-IL-----VPYYKQGYQIVRKYSPTAYVIVCQRIGNAD- 383 (532)
Q Consensus 314 ~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---~~-~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~- 383 (532)
.+.+.++++.+++||++. |..||++|||...... .. .+ .++++.+++++|+++|+..+++.+......
T Consensus 101 ~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd~~~~~~~ 178 (302)
T d1nq6a_ 101 RSAMNNHITQVMTHYKGK--IHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQN 178 (302)
T ss_dssp HHHHHHHHHHHHHHTTTS--CSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSS
T ss_pred HHHHHHHHHHHHHHcCCC--cceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecccccccCc
Confidence 888999999999999985 6679999999653211 11 11 146899999999999999998875321111
Q ss_pred c--h-------hhhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC
Q 009560 384 P--L-------ELYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT 454 (532)
Q Consensus 384 ~--~-------~~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~ 454 (532)
. . .+.....+.+-+.+..|++.... +.+. +. +.+..+. ..|.||+|+|++....
T Consensus 179 ~~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~------~~~~----~~----~~l~~~~-~~g~pi~iTE~d~~~~-- 241 (302)
T d1nq6a_ 179 AKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSD----FQ----ANLQRFA-DLGVDVQITELDIEGS-- 241 (302)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HH----HHHHHHH-TTTCEEEEEEEEECCC--
T ss_pred hhhHHHHHHHHHHHhccCCcceeEEEeccCCCCC------ChHH----HH----HHHHHHH-hcCCceEEecCCCCCC--
Confidence 1 1 11122244566777777764311 1221 11 1222233 3578999999987532
Q ss_pred CCCHHHHHHHHHHHHHHHHh-CC-CcEEEEcccCCCCCC
Q 009560 455 SGTQKDYQDFGSAQLEVYNA-AS-FGWAYWTLKNDRKHW 491 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~-~~-~Gw~yW~~k~e~~~W 491 (532)
.+...+++++.+..+-+ .. .|.++|.+.. ...|
T Consensus 242 ---~~~Qa~~~~~~~~~~~~~p~v~~i~~W~~~D-~~sw 276 (302)
T d1nq6a_ 242 ---GSAQAANYTKVVNACLAVTRCTGITVWGVTD-KYSW 276 (302)
T ss_dssp ---HHHHHHHHHHHHHHHHTSTTEEEEEESCSCG-GGCT
T ss_pred ---cHHHHHHHHHHHHHHHccCCceEEEEeCCcc-CCCc
Confidence 33344555555544433 33 3788888765 4456
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=99.04 E-value=1.1e-09 Score=108.79 Aligned_cols=228 Identities=18% Similarity=0.166 Sum_probs=136.0
Q ss_pred HHHHcCCCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCC
Q 009560 233 FLYRHGINTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPA 310 (532)
Q Consensus 233 ~la~~G~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~ 310 (532)
.+-..-||.+..- +- |...+|.++ .| .++.+|+++++|+++||.|+- |... | ++........+..
T Consensus 31 ~~~~~~fn~~t~~n~~k-W~~iep~~g-~~---~~~~~D~~v~~a~~~gl~v~g--h~lv-----w-~~~~p~~~~~~~~ 97 (312)
T d1fh9a_ 31 AIADSEFNLVVAENAMK-WDATEPSQN-SF---SFGAGDRVASYAADTGKELYG--HTLV-----W-HSQLPDWAKNLNG 97 (312)
T ss_dssp HHHHHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEE-----E-SSSCCHHHHTCCH
T ss_pred HHHHHhCCcccccccCc-chhhcCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--eccc-----c-cccccccccccch
Confidence 3333458888653 33 455666554 34 478999999999999999863 3210 1 0000000111223
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---cccH-----HHHHHHHHHHHHhhCCCcEEEEeCCCCCC
Q 009560 311 SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LDIL-----VPYYKQGYQIVRKYSPTAYVIVCQRIGNA 382 (532)
Q Consensus 311 ~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~~~~ 382 (532)
++..+.+.++++.+++||++. |..||++|||...... ...+ .+|++.+++++|+++|+..+++.+.....
T Consensus 98 ~~~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~~~ 175 (312)
T d1fh9a_ 98 SAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEG 175 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSCSS
T ss_pred HHHHHHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcccc
Confidence 466778889999999999975 7789999999653211 1111 25789999999999999999887532111
Q ss_pred Cc---hhhh-------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC
Q 009560 383 DP---LELY-------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN 452 (532)
Q Consensus 383 ~~---~~~~-------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~ 452 (532)
.. ..+. ....+.+-+.+..|++.... .++ +. +.+..+. ..+.||+|+|++....
T Consensus 176 ~~~~~~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~-------~~~-~~-------~~l~~~~-~~g~pi~iTE~d~~~~ 239 (312)
T d1fh9a_ 176 INAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQV-------PGD-FR-------QNLQRFA-DLGVDVRITELDIRMR 239 (312)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTCC-------CTT-HH-------HHHHHHH-TTTCEEEEEEEEEEEE
T ss_pred cchhHHHHHHHHHHHHhCCCCccceeEeecccccCc-------HHH-HH-------HHHHHHH-hcCCceEEeccccccC
Confidence 11 1111 11234566778888875411 111 11 1122233 3478999999997643
Q ss_pred CCCC--CHHHHHHHHHHHHHHHHhCC--CcEEEEcccCCCCCCc
Q 009560 453 VTSG--TQKDYQDFGSAQLEVYNAAS--FGWAYWTLKNDRKHWD 492 (532)
Q Consensus 453 ~~~a--~~~~~~~~~~~ql~~~~~~~--~Gw~yW~~k~e~~~Ws 492 (532)
.... +.+...++++..+..+-+.. .|.++|.+.. ...|-
T Consensus 240 ~~~~~~~~~~QA~~~~~~~~~~~~~~~v~~v~~W~~~D-~~~W~ 282 (312)
T d1fh9a_ 240 TPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITD-KYSWV 282 (312)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TTCSH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCCccEEEEeCCcc-CCccc
Confidence 2221 12223466676666655433 3788999875 55673
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=98.96 E-value=3.2e-09 Score=104.32 Aligned_cols=119 Identities=17% Similarity=0.185 Sum_probs=87.4
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
+.||+.||++|+|+||+.- . | +. +++++.|-+.||.|+.++-..- .+....+ .....
T Consensus 39 ~~di~l~k~~G~N~iR~~h----~--p--~~----------~~~~d~cD~~Gilv~~e~~~~~---~~~~~~~--~~~~~ 95 (297)
T d1yq2a5 39 REDLALMKRFNVNAIRTSH----Y--P--PH----------PRLLDLADEMGFWVILECDLET---HGFEAGG--WVENP 95 (297)
T ss_dssp HHHHHHHHHTTCCEEEETT----S--C--CC----------HHHHHHHHHHTCEEEEECSCBC---GGGTTTT--TTTCG
T ss_pred HHHHHHHHHCCCCEEEccC----C--C--Ch----------HHHHHHHHhcCCEEEEeecccc---ccccccC--ccCCc
Confidence 7899999999999999943 1 1 11 2788999999999999864310 0000000 00111
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
..++...+.+.+.++.+.+|++++|+|+.|.+.||+.. ....+++.+.+|+.+|++++....
T Consensus 96 ~~~~~~~~~~~~~~~emV~r~~NHPSIi~W~~gNE~~~--------~~~~~~~~~~~k~~D~tRp~~~~~ 157 (297)
T d1yq2a5 96 SDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT--------GSNLAAMAAWAHARDSSRPVHYEG 157 (297)
T ss_dssp GGCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECTT
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCceEeecccccCCc--------hHHHHHHHHHHHHhccCCcccccC
Confidence 12357788999999999999999999999999999864 234567889999999999987543
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.91 E-value=1e-08 Score=102.16 Aligned_cols=225 Identities=13% Similarity=0.202 Sum_probs=130.5
Q ss_pred CCCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCC-CCCCCCCCCCCCCCCCCCCChhhH
Q 009560 238 GINTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAP-GSQNGMEHSASRDGTTDWPASDYI 314 (532)
Q Consensus 238 G~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~p-Gsqn~~~~sg~~~g~~~W~~~~~~ 314 (532)
=||.+=.. +- |...+|.++ .| .++.+|+++++|+++||+|.- |... +++...... ......++..
T Consensus 38 ~fn~~t~~n~~k-W~~iEp~~G-~~---~~~~~D~~v~~a~~~gi~v~g--h~l~W~~~~p~~~~-----~~~~~~~~~~ 105 (324)
T d1vbua1 38 EFNILTPENQMK-WDTIHPERD-RY---NFTPAEKHVEFAEENDMIVHG--HTLVWHNQLPGWIT-----GREWTKEELL 105 (324)
T ss_dssp HCSEEEESSTTS-HHHHCCBTT-EE---ECHHHHHHHHHHHHTTCEEEE--EEEECSSSCCHHHH-----TSCCCHHHHH
T ss_pred hcCccccccCCc-hHHhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--ecCcccccCCcccc-----ccccchHHHH
Confidence 48988664 44 455677654 34 478999999999999999853 2110 111110000 0011224667
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC---cc----cHHHHHHHHHHHHHhhCCCcEEEEeCCCCCCC-c--
Q 009560 315 SQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP---LD----ILVPYYKQGYQIVRKYSPTAYVIVCQRIGNAD-P-- 384 (532)
Q Consensus 315 ~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~---~~----~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~-~-- 384 (532)
+.+.++++.+++||++. +..||++|||...... .. ....+++.+++++|+++|+..|++.+...... .
T Consensus 106 ~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~~~~~~~~~ 183 (324)
T d1vbua1 106 NVLEDHIKTVVSHFKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEINAKS 183 (324)
T ss_dssp HHHHHHHHHHHHHTTTT--CCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSSSHHH
T ss_pred HHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCcHhH
Confidence 88899999999999985 4569999999653211 01 11367899999999999999988875322111 1
Q ss_pred hhhhh-------ccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCC-
Q 009560 385 LELYQ-------ANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSG- 456 (532)
Q Consensus 385 ~~~~~-------~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a- 456 (532)
..+.. .....+.+.+..|++.. ..+.+ .+. +.+..+. ..|.||+|+|+|........
T Consensus 184 ~~~~~~v~~l~~~~~~id~iG~q~h~~~~------~~~~~----~~~----~~l~~~~-~~g~pi~iTE~~~~~~~~~~~ 248 (324)
T d1vbua1 184 NFVYNMIKELKEKGVPVDGIGFQMHIDYR------GLNYD----SFR----RNLERFA-KLGLQIYITEMDVRIPLSGSE 248 (324)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEEETT------CCCHH----HHH----HHHHHHH-TTTCEEEEEEEEEEEESSSCH
T ss_pred HHHHHHHHHHHhCCCCcceeEeeeccCcC------CCCHH----HHH----HHHHHHH-hcCCceeeeeceeccCCCCCC
Confidence 11111 11234455555554432 11222 222 2233333 34789999999975432111
Q ss_pred --CHHHHHHHHHHHHHHHHh--CCCcEEEEcccCCCCCCc
Q 009560 457 --TQKDYQDFGSAQLEVYNA--ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 457 --~~~~~~~~~~~ql~~~~~--~~~Gw~yW~~k~e~~~Ws 492 (532)
+.+...+|++..+..+-+ ...|-++|.+.. ..+|.
T Consensus 249 ~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D-~~~w~ 287 (324)
T d1vbua1 249 EYYLKKQAEVCAKIFDICLDNPAVKAIQFWGFTD-KYSWV 287 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TSCSH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCeEEEEEecccc-CCccC
Confidence 122345566665555443 234788998875 55664
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.87 E-value=8e-09 Score=102.36 Aligned_cols=236 Identities=13% Similarity=0.166 Sum_probs=134.8
Q ss_pred HHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCC
Q 009560 231 FNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDW 308 (532)
Q Consensus 231 ~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W 308 (532)
.+.+-..-||.+=. .+. |...+|.++ .| .++.+|++|++|+++||.|.--.-..+.....+.. ...+
T Consensus 30 y~~~~~~~fn~~t~~n~~k-W~~iep~~G-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w~~------~~~~ 98 (320)
T d1xyza_ 30 YNSILQREFSMVVCENEMK-FDALQPRQN-VF---DFSKGDQLLAFAERNGMQMRGHTLIWHNQNPSWLT------NGNW 98 (320)
T ss_dssp HHHHHHHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHH------TSCC
T ss_pred HHHHHHHhCCeeeecccCc-hHHhCCCCC-cc---ChHHHHHHHHHHHHCCCEEEeeccccCCCCCcchh------cccc
Confidence 34443444888842 244 456677654 44 37889999999999999986322111100000100 1112
Q ss_pred CChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC---CcccH-----HHHHHHHHHHHHhhCCCcEEEEeCCCC
Q 009560 309 PASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV---PLDIL-----VPYYKQGYQIVRKYSPTAYVIVCQRIG 380 (532)
Q Consensus 309 ~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~---~~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~~ 380 (532)
..++..+.+.++++.+++||++. |..||++|||..... ....+ .+++..+++++|+.+|+..+++.+...
T Consensus 99 ~~~~~~~~~~~~i~~v~~ry~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~~~~ 176 (320)
T d1xyza_ 99 NRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYNI 176 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSC
T ss_pred chHHHHHHHHHHHHHHHHHcCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeecccc
Confidence 23566788999999999999985 667999999975321 11111 256889999999999999888875321
Q ss_pred CC-Cc--hhhhhc-----cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccC
Q 009560 381 NA-DP--LELYQA-----NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWN 452 (532)
Q Consensus 381 ~~-~~--~~~~~~-----~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~ 452 (532)
.. .+ ..++.. ..+.+-..+.+|.|..... ... ....+. +.+..+.. .+.||+|+|+|....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~id~iG~q~h~~~~~-----~~~-~~~~~~----~~l~~~~~-~g~pI~iTE~~~~~~ 245 (320)
T d1xyza_ 177 EDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGM-----SPE-YLASID----QNIKRYAE-IGVIVSFTEIDIRIP 245 (320)
T ss_dssp SSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC-----CHH-HHHHHH----HHHHHHHH-TTCEEEEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHHHHhCcCccceEEecccccCCC-----Cch-HHHHHH----HHHHHHHh-cCCceeeeccccccC
Confidence 11 11 122221 1233445566666542111 111 112222 22333343 368999999996532
Q ss_pred CCCCC---HHHHHHHHHHHHHHHHhC-C-CcEEEEcccCCCCCC
Q 009560 453 VTSGT---QKDYQDFGSAQLEVYNAA-S-FGWAYWTLKNDRKHW 491 (532)
Q Consensus 453 ~~~a~---~~~~~~~~~~ql~~~~~~-~-~Gw~yW~~k~e~~~W 491 (532)
....+ .+...+|+++.+..+.+. . .|.++|.+.. ...|
T Consensus 246 ~~~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D-~~~w 288 (320)
T d1xyza_ 246 QSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTD-KYTW 288 (320)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBT-TSCS
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhCCCeeEEEEeeccc-CCcc
Confidence 11111 223346667666555543 3 4888999975 5556
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=98.82 E-value=2.5e-08 Score=98.37 Aligned_cols=224 Identities=17% Similarity=0.173 Sum_probs=127.0
Q ss_pred HHHcCCCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCCh
Q 009560 234 LYRHGINTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPAS 311 (532)
Q Consensus 234 la~~G~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~ 311 (532)
+-..-||.+=.- +- |...+|.++ .| .++.+|+++++|+++||.|.--..-.+.....|. .....+
T Consensus 32 ~~~~~fn~~t~~n~~k-W~~~ep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w~--------~~~~~~ 98 (302)
T d1v0la_ 32 IAGREFNMVTAENEMK-IDATEPQRG-QF---NFSSADRVYNWAVQNGKQVRGHTLAWHSQQPGWM--------QSLSGS 98 (302)
T ss_dssp HHHHHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHH--------HTCCHH
T ss_pred HHHhhCCeeeecccCc-hhhhCCCCC-cC---ChHHHHHHHHHHHHCCCEEEEeccccchhccccc--------cccCcH
Confidence 333347777432 33 445566554 44 4688999999999999998642221111110000 001124
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC---Cc-----ccHHHHHHHHHHHHHhhCCCcEEEEeCCCC-CC
Q 009560 312 DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV---PL-----DILVPYYKQGYQIVRKYSPTAYVIVCQRIG-NA 382 (532)
Q Consensus 312 ~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~---~~-----~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~-~~ 382 (532)
...+.+.++++.+++||++. |..||++|||..... .. ....++++.+++++|+++|+..|++.+... +.
T Consensus 99 ~~~~~~~~~i~~~~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~ 176 (302)
T d1v0la_ 99 ALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENW 176 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCST
T ss_pred HHHHHHHHHHHHHHhhcCCC--ceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEeecCcccccC
Confidence 66778889999999999985 566999999964321 11 223468899999999999999998875321 11
Q ss_pred Cc---hhhhhc-----cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCC
Q 009560 383 DP---LELYQA-----NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVT 454 (532)
Q Consensus 383 ~~---~~~~~~-----~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~ 454 (532)
.. ..++.. ..+.+-..+.+|.+..... .+.++. . +.+..+. ..|.||+|+|++...
T Consensus 177 ~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~----p~~~~~----~----~~l~~~~-~~glpi~iTE~d~~~--- 240 (302)
T d1v0la_ 177 TWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGS----PYNSNF----R----TTLQNFA-ALGVDVAITELDIQG--- 240 (302)
T ss_dssp TSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB----CCCTTH----H----HHHHHHH-TTTCEEEEEEEEETT---
T ss_pred ChHHHHHHHHHHHHHHhCCCCccceEEeeccCCCC----CCHHHH----H----HHHHHHH-hcCCceEEeeccCCC---
Confidence 11 122211 1223334444444422111 112221 1 1222333 347899999998752
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 455 SGTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 455 ~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
...+.+.++++..++. ....|.++|.+.. ...|.
T Consensus 241 -~qa~~~~~~~~~~~s~--~~v~gi~~Wg~~D-~~~w~ 274 (302)
T d1v0la_ 241 -APASTYANVTNDCLAV--SRCLGITVWGVRD-SDSWR 274 (302)
T ss_dssp -CCHHHHHHHHHHHHTC--TTEEEEEESCSBG-GGSTT
T ss_pred -CCHHHHHHHHHHHHhh--hCCeEEEECCCcc-CCCCC
Confidence 3445566666554321 2445777898764 44564
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.82 E-value=1.7e-08 Score=100.00 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=88.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+ |...+ + +.+++.|.++||.|+.++...+..... ..+. ....
T Consensus 42 ~~~l~~~k~~G~N~iR~----~~~~~-----~---------~~f~d~~D~~Gi~V~~e~~~~~~w~~~--~~~~--~~~~ 99 (339)
T d2vzsa5 42 ADKLKYVLNLGLNTVRL----EGHIE-----P---------DEFFDIADDLGVLTMPGWECCDKWEGQ--VNGE--EKGE 99 (339)
T ss_dssp HHHHHHHHHTTCCEEEE----ESCCC-----C---------HHHHHHHHHHTCEEEEECCSSSGGGTT--TSTT--SSSC
T ss_pred HHHHHHHHHcCCCEEEe----cCCCC-----C---------HHHHHHHHHCCCeEecccccCcccccc--CCcc--cccC
Confidence 68999999999999998 22211 1 357788999999999997654321110 0110 1111
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
-.++...+.+.+.++.+++|++++|+|++|.+.||+... ..+.+.+.+.+|+.||+++++...
T Consensus 100 ~~~p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~~-------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 100 PWVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCch-------HHHHHHHHHHHHHhCCCceeEecC
Confidence 224678888999999999999999999999999998642 245567788899999999877553
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.81 E-value=7.3e-08 Score=97.46 Aligned_cols=223 Identities=16% Similarity=0.172 Sum_probs=127.4
Q ss_pred cCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEE---EcCCCCCCCCCCCCCCCCCCCCCCCCh
Q 009560 237 HGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCII---DLHAAPGSQNGMEHSASRDGTTDWPAS 311 (532)
Q Consensus 237 ~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VIL---DlH~~pGsqn~~~~sg~~~g~~~W~~~ 311 (532)
.-||.|=. .+- |...+|.++ .| .++.+|+++++|+++||+|.- -.|... +. +... .......+
T Consensus 45 ~~fn~~t~eN~mK-W~~iep~~G-~~---nf~~~D~~v~~a~~~gi~v~GH~lvW~~~~--~~-~~~~----~~~~~~~~ 112 (364)
T d1us3a2 45 KHFNHLTAGNIMK-MSYMQPTEG-NF---NFTNADAFVDWATENNMTVHGHALVWHSDY--QV-PNFM----KNWAGSAE 112 (364)
T ss_dssp HHCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEECCGG--GS-CHHH----HTCCSCHH
T ss_pred HhCCeeeecccCC-hHHhcCCCC-cc---CcHHHHHHHHHHHHCCCEEEEeecCCCccc--CC-cccc----ccCCccHH
Confidence 33777743 233 345566554 44 478899999999999999862 222210 00 0000 00111224
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC------cccH-------HHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 312 DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP------LDIL-------VPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 312 ~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~------~~~l-------~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
+..+++.++++.+++||++...|..||++|||...... ...+ ..|++.+.+++|+++|+..+++.+.
T Consensus 113 ~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy 192 (364)
T d1us3a2 113 DFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDY 192 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhccccceeeccc
Confidence 56778889999999999976779999999999643211 1111 2378889999999999999888753
Q ss_pred CCCCCc---hh-------hhhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccC
Q 009560 379 IGNADP---LE-------LYQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWV 448 (532)
Q Consensus 379 ~~~~~~---~~-------~~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG 448 (532)
....+. .. +.....+.+-+-+..|.|... .+.+ .+. +.+..+. ..|.||.|+|++
T Consensus 193 ~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------p~~~----~i~----~~l~~~~-~~g~~I~iTEld 257 (364)
T d1us3a2 193 NIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNY------PSIA----NIS----AAMKKVV-DLGLLVKITELD 257 (364)
T ss_dssp STTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHH----HHHHHHH-TTTCEEEEEEEE
T ss_pred cccccchhhhHHHHHHHHHHhCCCccccceeeeeccCCC------CCHH----HHH----HHHHHHH-hcCCeeEEEeee
Confidence 211111 11 112223455666777776431 1121 222 2233333 347899999998
Q ss_pred cccCCC-----------CCCH---HHHHHHHHHHHHHHHh-----CCCcEEEEcccC
Q 009560 449 NEWNVT-----------SGTQ---KDYQDFGSAQLEVYNA-----ASFGWAYWTLKN 486 (532)
Q Consensus 449 ~~~~~~-----------~a~~---~~~~~~~~~ql~~~~~-----~~~Gw~yW~~k~ 486 (532)
...... ..+. ....++++..+.++-+ ...|.++|.+..
T Consensus 258 i~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~D 314 (364)
T d1us3a2 258 VAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTD 314 (364)
T ss_dssp EESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBG
T ss_pred EecccCccccccccccCCCChHHHHHHHHHHHHHHHHHHhcccccccceEEEecCCc
Confidence 743211 0111 1223444555544432 224788998765
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.72 E-value=2.2e-07 Score=92.48 Aligned_cols=225 Identities=12% Similarity=0.167 Sum_probs=128.5
Q ss_pred CCEEEEc--cccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEE---EcCC-CCCCCCCCCCCCCCCCCCCCCChh
Q 009560 239 INTVRIP--VGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCII---DLHA-APGSQNGMEHSASRDGTTDWPASD 312 (532)
Q Consensus 239 ~N~VRIp--v~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VIL---DlH~-~pGsqn~~~~sg~~~g~~~W~~~~ 312 (532)
||.+=.. +-| ...+|.++ .| .++.+|+++++|+++||.|.- =.|. .|. |-.... ....+..++
T Consensus 37 fn~~t~~n~~kW-~~iep~~g-~~---~~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~----W~~~~~--~~~~~~~~~ 105 (330)
T d1n82a_ 37 VNSITAENHMKF-EHLQPEEG-KF---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPD----WVFQDG--QGHFVSRDV 105 (330)
T ss_dssp CSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCG----GGGBCS--SSSBCCHHH
T ss_pred cCccccccCCCh-HhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEeecccCCCCCc----hhccCC--cCCcCCHHH
Confidence 8888664 444 45666654 44 468899999999999999753 2232 332 211100 011122245
Q ss_pred hHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCC----CcccH-----HHHHHHHHHHHHhhCCCcEEEEeCCCCCCC
Q 009560 313 YISQTLDVIDFLASRYAKHPALLGIELLNEPSAATV----PLDIL-----VPYYKQGYQIVRKYSPTAYVIVCQRIGNAD 383 (532)
Q Consensus 313 ~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~----~~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~ 383 (532)
..+.+.++++.+++||++. |..||++|||..... ....+ .++++.+++++|+++|+..|++.+.. ...
T Consensus 106 ~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~~~-~~~ 182 (330)
T d1n82a_ 106 LLERMKCHISTVVRRYKGK--IYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYNDYN-ECF 182 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTT--CCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESS-TTS
T ss_pred HHHHHHHHHHHHHHhcCCC--ceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeecccc-ccc
Confidence 6788899999999999975 667999999964311 11112 35778999999999999998887532 111
Q ss_pred c---hhhhhc-----cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC--
Q 009560 384 P---LELYQA-----NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV-- 453 (532)
Q Consensus 384 ~---~~~~~~-----~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~-- 453 (532)
. ..+... ..+.+-..+.+|.|..... .+ ...+. +.+..+.. .|.||.++|++.....
T Consensus 183 ~~~~~~~~~~v~~l~~~g~~idgiG~q~h~~~~~----~~----~~~i~----~~l~~~~~-~g~~i~iTE~d~~~~~~~ 249 (330)
T d1n82a_ 183 PEKREKIFALVKSLRDKGIPIHGIGMQAHWSLTR----PS----LDEIR----AAIERYAS-LGVVLHITELDVSMFEFH 249 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS----SC----HHHHH----HHHHHHHT-TTCEEEEEEEEEESSCTT
T ss_pred ccchhhHHHHHHHHHhCCCCcceEEEeecCccCc----CC----HHHHH----HHHHHHHh-cCCceeeccccccccCcc
Confidence 1 111111 1233445666665532110 11 12222 22333333 4789999999874211
Q ss_pred ------CCCCH---HHHHHHHHHHHHHHHh--CC-CcEEEEcccCCCCCC
Q 009560 454 ------TSGTQ---KDYQDFGSAQLEVYNA--AS-FGWAYWTLKNDRKHW 491 (532)
Q Consensus 454 ------~~a~~---~~~~~~~~~ql~~~~~--~~-~Gw~yW~~k~e~~~W 491 (532)
...+. +...+++++.+.++-+ .+ .|.++|.+.. ...|
T Consensus 250 ~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~p~v~gi~~Wg~~D-~~sW 298 (330)
T d1n82a_ 250 DRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTFWGIAD-DHTW 298 (330)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBT-TSCG
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCeeEEEEecCcc-CCcc
Confidence 01112 2334556665555543 33 3888998765 3444
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=98.72 E-value=6.2e-08 Score=95.53 Aligned_cols=213 Identities=19% Similarity=0.305 Sum_probs=127.3
Q ss_pred CCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC-----Ch
Q 009560 239 INTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWP-----AS 311 (532)
Q Consensus 239 ~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~-----~~ 311 (532)
||.+=. .+- |...+|.++ .| .++.+|+++++|+++||.|.- |..- | +.. .+.|. .+
T Consensus 37 fn~~t~en~~k-W~~iEp~~G-~~---~~~~~D~~v~~a~~~gl~v~g--H~lv-----W-~~~----~P~w~~~~~~~~ 99 (301)
T d1ta3b_ 37 FGVITPENSMK-WDALEPSQG-NF---GWSGADYLVDYATQHNKKVRG--HTLV-----W-HSQ----LPSWVSSIGDAN 99 (301)
T ss_dssp CSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--EEEE-----C-SSS----CCHHHHTCCCHH
T ss_pred CCeecccccCc-chhhCCCCC-cC---CcHHHHHHHHHHHHCCCEEEE--eccc-----c-Ccc----CchhhhccccHH
Confidence 777753 222 455677654 33 468899999999999998765 3221 1 000 11121 23
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC--cccH-----HHHHHHHHHHHHhhCCCcEEEEeCC-CCCCC
Q 009560 312 DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP--LDIL-----VPYYKQGYQIVRKYSPTAYVIVCQR-IGNAD 383 (532)
Q Consensus 312 ~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~--~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~-~~~~~ 383 (532)
+..+.+.++++.+++||++. |-.||++|||...... ...+ .++++.+++++|+++|+..+++.+. ..+..
T Consensus 100 ~~~~~~~~~I~~v~~rY~g~--i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~~ 177 (301)
T d1ta3b_ 100 TLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSAS 177 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCC--cceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeeccccccccc
Confidence 55778889999999999874 6679999999543211 1111 3688999999999999999888652 11111
Q ss_pred c---hhhh-------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCC
Q 009560 384 P---LELY-------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNV 453 (532)
Q Consensus 384 ~---~~~~-------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~ 453 (532)
. ..+. ......+.+.+..|+.... .+.+. +. +.+..+...+.+||.|+|++..
T Consensus 178 ~~~~~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~------~~~~~-~~-------~~l~~~~~~g~~~i~iTE~dv~--- 240 (301)
T d1ta3b_ 178 YAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSH------WSSTE-AA-------GALSSLANTGVSEVAITELDIA--- 240 (301)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTC------CCGGG-HH-------HHHHHHHTTCCSEEEEEEEEET---
T ss_pred hHHHHHHHHHHHHHHhCCCCcceeeeeeecCCCC------CCHHH-HH-------HHHHHHHHcCCCcccccccccc---
Confidence 1 1121 1123455666777764321 11221 11 1233345454567999999875
Q ss_pred CCCCHHHHHHHHHHHHHHHHh-CCCcEEEEcccCCCCCCc
Q 009560 454 TSGTQKDYQDFGSAQLEVYNA-ASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 454 ~~a~~~~~~~~~~~ql~~~~~-~~~Gw~yW~~k~e~~~Ws 492 (532)
....+.|.++++.. ++. ...|.++|.+.. +..|-
T Consensus 241 -~~qa~~~~~~~~~~---~~~p~v~gi~~Wg~~D-~~~w~ 275 (301)
T d1ta3b_ 241 -GAASSDYLNLLNAC---LNEQKCVGITVWGVSD-KDSWR 275 (301)
T ss_dssp -TCCHHHHHHHHHHH---HTCTTEEEEEESCSBG-GGSTT
T ss_pred -hHHHHHHHHHHHHH---HcccCceEEEEcCCcc-CCCCC
Confidence 23456666666543 332 445888998875 44563
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=8.4e-08 Score=93.33 Aligned_cols=116 Identities=14% Similarity=0.174 Sum_probs=88.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+... + . -+.+++.|.++||.|+.++-.. + . +.......
T Consensus 40 ~~di~l~k~~G~N~iR~~~~------p--~----------~~~~~~~~D~~Gilv~~e~~~~---~----~-~~~~~~~~ 93 (292)
T d1jz8a5 40 VQDILLMKQNNFNAVRCSHY------P--N----------HPLWYTLCDRYGLYVVDEANIE---T----H-GMVPMNRL 93 (292)
T ss_dssp HHHHHHHHHTTCCEEECTTS------C--C----------CHHHHHHHHHHTCEEEEECSCB---C----T-TSSSTTTT
T ss_pred HHHHHHHHhcCCCEEEecCC------C--C----------hHHHHHHHhhcCCeEEeeeeec---c----c-CCcccCCC
Confidence 68999999999999998431 1 1 1267899999999999997431 1 0 00111122
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
..++...+.+.+.++.+.+|++++|+|++|.+.||+... ...+.+.+.+|+.+|++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~~--------~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 94 TDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHccCCCcHHHhcccccCCcc--------hhhHHHHHHHHHHhhcCcccccc
Confidence 335788999999999999999999999999999999642 34567778899999999988754
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=1.4e-08 Score=85.46 Aligned_cols=82 Identities=21% Similarity=0.284 Sum_probs=65.9
Q ss_pred ccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCce
Q 009560 52 PSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCV 131 (532)
Q Consensus 52 ~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~ 131 (532)
|..|+ +...+ ..++||+ .||||+|+++.| .|++.+++ .|.|.|-..+++.+++|+ ||+||+++.+|.
T Consensus 29 ~e~F~-l~~~~----g~y~lr~-~~gkyw~~~~dG--~l~~~~~~---~~~F~le~~~~~~~~~~a-nGkYL~~~~~G~- 95 (111)
T d1dfca4 29 YDVFQ-LEFND----GAYNIKD-STGKYWTVGSDS--AVTSSGDT---PVDFFFEFCDYNKVAIKV-GGRYLKGDHAGV- 95 (111)
T ss_dssp CCCBE-EEEET----TEEEEEC-TTSCBCEECSSC--BEESCCSS---CCCBEEEEEETTEEEEEE-TTEEEEECGGGB-
T ss_pred CcEEE-EEEcC----CEEEEEc-CCCCEEEEcCCC--cEEeCCCC---CCCEEEEEeCCCEEEEcc-CCeEEEeCCCCe-
Confidence 47888 44433 5899998 899999999876 46665543 477886666778899995 999999988885
Q ss_pred EEEeecCCCCCceEE
Q 009560 132 VSATAKSPSTPETFE 146 (532)
Q Consensus 132 ~~a~~~~~~~~e~F~ 146 (532)
|.|++++|+..|.|+
T Consensus 96 L~A~~~~~~~~~lwE 110 (111)
T d1dfca4 96 LKASAETVDPASLWE 110 (111)
T ss_dssp EEEEESSCCGGGCBB
T ss_pred EEeCCCCCCccceEe
Confidence 999999999999886
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.58 E-value=2.7e-07 Score=90.99 Aligned_cols=214 Identities=18% Similarity=0.256 Sum_probs=125.0
Q ss_pred CCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCC----C-h
Q 009560 239 INTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWP----A-S 311 (532)
Q Consensus 239 ~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~----~-~ 311 (532)
||.+=. -+- |...+|.++ .| .++..|++++||+++||.|.= |..- | ++ ..+.|. + +
T Consensus 40 fn~~t~eN~~K-W~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~vrG--H~lv-----W-~~----~~P~W~~~~~~~~ 102 (303)
T d1i1wa_ 40 FGQVTPENSMK-WDATEPSQG-NF---NFAGADYLVNWAQQNGKLIRG--HTLV-----W-HS----QLPSWVSSITDKN 102 (303)
T ss_dssp CSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEE-----C-ST----TCCHHHHTCCCHH
T ss_pred CCcccccccCc-chhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--eeee-----e-cC----cCchhhhcccccH
Confidence 666542 112 345566554 33 478999999999999998642 2110 0 10 011221 2 2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCC--cccH-----HHHHHHHHHHHHhhCCCcEEEEeCCC-CCCC
Q 009560 312 DYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVP--LDIL-----VPYYKQGYQIVRKYSPTAYVIVCQRI-GNAD 383 (532)
Q Consensus 312 ~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~--~~~l-----~~~~~~~~~aIR~~~~~~~Viv~~~~-~~~~ 383 (532)
...+.+.++++.+++||++. |..||++|||...... ...+ .+|++.++++.|+++|+..+++.+.. .+..
T Consensus 103 ~~~~~~~~~i~~v~~rY~g~--i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Ndy~~~~~~ 180 (303)
T d1i1wa_ 103 TLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSAS 180 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSS
T ss_pred HHHHHHHHHHHHHHHHcCCC--CchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeecCcccCCc
Confidence 45667788999999999874 6779999999653211 0111 35788999999999999999987532 1111
Q ss_pred c---hhhhhc-----cCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCC
Q 009560 384 P---LELYQA-----NIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTS 455 (532)
Q Consensus 384 ~---~~~~~~-----~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~ 455 (532)
+ ..+... ..+.+-..+.+|.+.... ... .+. +.+..+...+++||.|+|+... .
T Consensus 181 ~~k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~------~~~----~~~----~~~~~~~~~g~~~i~iTElDi~----~ 242 (303)
T d1i1wa_ 181 YPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAG------QGA----SVL----QALPLLASAGTPEVAITELDVA----G 242 (303)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT------THH----HHH----HHHHHHHTTCCSEEEEEEEEET----T
T ss_pred HHHHHHHHHHHHHHHhCCCCccceEeeeccCCC------CcH----HHH----HHHHHHHHcCCCceeecccccc----c
Confidence 1 112111 123333445555442211 111 111 2234455666778999999764 3
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEcccCCCCCCc
Q 009560 456 GTQKDYQDFGSAQLEVYNAASFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 456 a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~e~~~Ws 492 (532)
...+.|.++++..++ .....|.++|.+.. ...|.
T Consensus 243 ~qa~~y~~~~~~~~~--~p~v~git~Wg~~D-~~sW~ 276 (303)
T d1i1wa_ 243 ASSTDYVNVVNACLN--VSSCVGITVWGVAD-PDSWR 276 (303)
T ss_dssp CCHHHHHHHHHHHHH--CTTEEEEEESCSBG-GGSTT
T ss_pred ccHHHHHHHHHHHhc--cCCceEEEEeCCcc-CCCcC
Confidence 445677777765432 13456888998875 44563
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=98.40 E-value=2.9e-06 Score=85.74 Aligned_cols=236 Identities=18% Similarity=0.205 Sum_probs=128.4
Q ss_pred HHHHHHHcCCCEEEE--ccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCCC-CCCCCCCCCC
Q 009560 230 DFNFLYRHGINTVRI--PVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAA-PGSQNG-MEHSASRDGT 305 (532)
Q Consensus 230 d~~~la~~G~N~VRI--pv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn~-~~~sg~~~g~ 305 (532)
..+.+++ -||.+=. .+- |...+|.++ .| .++..|+++++|+++||.|.= |.. .++|.. |-... ..+.
T Consensus 36 ~~~~~~~-~Fn~~t~eN~mK-W~~iep~~G-~~---n~~~aD~~v~~a~~ngi~vrG--H~LvW~~~~P~W~~~~-~~~~ 106 (371)
T d1r85a_ 36 DVQMLKR-HFNSIVAENVMK-PISIQPEEG-KF---NFEQADRIVKFAKANGMDIRF--HTLVWHSQVPQWFFLD-KEGK 106 (371)
T ss_dssp HHHHHHH-HCSEEEESSTTS-HHHHCSBTT-BC---CCHHHHHHHHHHHHTTCEEEE--ECSCCSTTCCGGGGBC-TTSS
T ss_pred HHHHHHH-hcCeecccccCc-chhhcCCCC-cc---CcHHHHHHHHHHHHCCCEEEE--eEEEeecccccccccc-cccc
Confidence 3344444 3888842 133 345566554 44 478899999999999999843 322 111211 11000 0000
Q ss_pred C--CCC--------ChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc------ccH-HHHHHHHHHHHHhh-
Q 009560 306 T--DWP--------ASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL------DIL-VPYYKQGYQIVRKY- 367 (532)
Q Consensus 306 ~--~W~--------~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~------~~l-~~~~~~~~~aIR~~- 367 (532)
. ... .++..+.+.++++.+++||++ .|..||++|||....... +.+ .+|+..+.+..|++
T Consensus 107 ~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~ 184 (371)
T d1r85a_ 107 PMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYG 184 (371)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHHcCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhc
Confidence 0 001 123456677899999999987 477799999996532111 111 45788999999987
Q ss_pred CCCcEEEEeCCCCCCCc--hhhh-------hccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcC
Q 009560 368 SPTAYVIVCQRIGNADP--LELY-------QANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNAN 438 (532)
Q Consensus 368 ~~~~~Viv~~~~~~~~~--~~~~-------~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 438 (532)
+|+..+++.+.....+. ..++ ....+-+.+-+..|+...+. +.+ .+. +.+..+.. .
T Consensus 185 ~p~~~L~~Ndy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~------~~~----~i~----~~l~~~a~-~ 249 (371)
T d1r85a_ 185 GDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWP------SEA----EIE----KTINMFAA-L 249 (371)
T ss_dssp CTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSS------CHH----HHH----HHHHHHHH-T
T ss_pred CCcceeeeccccccccchhHHHHHHHHHHHHCCCCcceeeccccccCCCC------CHH----HHH----HHHHHHHH-c
Confidence 56777777542111111 1121 11234566667778754211 111 222 22333333 4
Q ss_pred CCcEEEeccCcccCCC--C-------CC---HHHHHHHHHHHHHHHHhC---CCcEEEEcccCCCCCCc
Q 009560 439 GPLVFIGEWVNEWNVT--S-------GT---QKDYQDFGSAQLEVYNAA---SFGWAYWTLKNDRKHWD 492 (532)
Q Consensus 439 g~pv~vGEwG~~~~~~--~-------a~---~~~~~~~~~~ql~~~~~~---~~Gw~yW~~k~e~~~Ws 492 (532)
|.||.|+|+-..-... . .+ .....+++++.+.++.+. .-|.++|.+.. ...|-
T Consensus 250 Gl~i~ITElDV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~D-~~sW~ 317 (371)
T d1r85a_ 250 GLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIAD-NHTWL 317 (371)
T ss_dssp TCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST-TSCGG
T ss_pred CCceEEeeeEeccCCCccccCcccccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCCC-CCccc
Confidence 7899999997642110 0 11 122344556666665442 45899998876 44563
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.24 E-value=2.7e-05 Score=77.80 Aligned_cols=189 Identities=13% Similarity=0.170 Sum_probs=110.6
Q ss_pred HHHHcCCCEEEEcccc--ccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEE---EEEcCCC-CCCCCCCCCCCCCCCCC
Q 009560 233 FLYRHGINTVRIPVGW--WIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKC---IIDLHAA-PGSQNGMEHSASRDGTT 306 (532)
Q Consensus 233 ~la~~G~N~VRIpv~w--w~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~V---ILDlH~~-pGsqn~~~~sg~~~g~~ 306 (532)
.+-..=||.+= |-.- |...++.++ .| .++..|+++++|+++||.| .|-.|.. |. |.... ...
T Consensus 30 ~~~~~~Fn~~t-~eN~~KW~~ie~~~G-~~---~~~~~D~~v~~a~~~gi~vrGH~LvW~~~~P~----w~~~~---~~~ 97 (350)
T d1ur1a_ 30 TLIAKEFNSIT-PENCMKWGVLRDAQG-QW---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIHD----EVFKN---ADG 97 (350)
T ss_dssp HHHHHHCSEEE-ESSTTSHHHHBCTTC-CB---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSCG----GGTBC---TTS
T ss_pred HHHHHHcCeec-ccccCchhhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEEEEEEEcccccc----ccccc---CCc
Confidence 33333477773 3211 345566544 44 4789999999999999987 3445532 11 11110 011
Q ss_pred CCCC-hhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCc--c----cH-HHHHHHHHHHHHhhCCCcEEEEeCC
Q 009560 307 DWPA-SDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPL--D----IL-VPYYKQGYQIVRKYSPTAYVIVCQR 378 (532)
Q Consensus 307 ~W~~-~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~--~----~l-~~~~~~~~~aIR~~~~~~~Viv~~~ 378 (532)
...+ ++..+.+.++++.++.||++. |..||++|||....... . .+ ..|+..+.++.|+++|+..+++.+.
T Consensus 98 ~~~~~~~l~~~~~~~I~~v~~ry~g~--i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Ndy 175 (350)
T d1ur1a_ 98 SYISKAALQKKMEEHITTLAGRYKGK--LAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDY 175 (350)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred cccCHHHHHHHHHHHHHHHHHhcCCc--ceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeeccc
Confidence 1112 355677889999999999864 66799999996532111 0 11 3578899999999999999888653
Q ss_pred CCCCC--chhh-------hhccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCc
Q 009560 379 IGNAD--PLEL-------YQANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVN 449 (532)
Q Consensus 379 ~~~~~--~~~~-------~~~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~ 449 (532)
..... ...+ .....+-+-+-+..|.+... .+.+ .+.. .+..+. ..|.||.|+|+..
T Consensus 176 n~~~~~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~~~~------~~~~----~i~~----~l~~~~-~lg~~i~iTElDv 240 (350)
T d1ur1a_ 176 NIERTGKREATVEMIERLQKRGMPIHGLGIQGHLGIDT------PPIA----EIEK----SIIAFA-KLGLRVHFTSLDV 240 (350)
T ss_dssp STTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SCHH----HHHH----HHHHHH-TTTCEEEEEEEEE
T ss_pred ccccccccHHHHHHHHHHHhCCCCceEEEEeeeccCCC------CCHH----HHHH----HHHHHH-hcCCceeecccce
Confidence 21111 1112 12223456677777976431 1122 2222 233333 3478999999976
Q ss_pred c
Q 009560 450 E 450 (532)
Q Consensus 450 ~ 450 (532)
.
T Consensus 241 ~ 241 (350)
T d1ur1a_ 241 D 241 (350)
T ss_dssp E
T ss_pred e
Confidence 3
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.22 E-value=2.3e-05 Score=75.79 Aligned_cols=208 Identities=13% Similarity=0.117 Sum_probs=120.8
Q ss_pred HcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC--CCCCCCCCCCCCCCCCChhh
Q 009560 236 RHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQ--NGMEHSASRDGTTDWPASDY 313 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq--n~~~~sg~~~g~~~W~~~~~ 313 (532)
.+|++.+|+||+. + ...+...-.+++.|+++|++++...-..|+.. |+.... ..-..++.
T Consensus 31 g~g~s~~R~~id~------~------~~~~~~~i~~~k~A~~~~~ki~~spWSpP~wMK~n~~~~~------gg~L~~~~ 92 (277)
T d1nofa2 31 QIGLSIMRVRIDP------D------SSKWNIQLPSARQAVSLGAKIMATPWSPPAYMKSNNSLIN------GGRLLPAN 92 (277)
T ss_dssp CCCCCEEEEECCS------S------GGGGGGGHHHHHHHHHTTCEEEEECSCCCGGGBTTSSSBS------CCBBCGGG
T ss_pred CCcceEEEeeeCC------C------cchhhHhhHHHHHHHHcCCcEEEcCCCCcHHHcCCCCccc------CCccCHHH
Confidence 4799999999932 1 11222335667778999999999999988742 221111 12235788
Q ss_pred HHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCCC------CCcccHHHHHHHHHHHHHhhCCCcEEEEeCCCCC-CC-c
Q 009560 314 ISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAAT------VPLDILVPYYKQGYQIVRKYSPTAYVIVCQRIGN-AD-P 384 (532)
Q Consensus 314 ~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~~------~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~~~~~-~~-~ 384 (532)
.+.+.+++....+.|+++. .|.++.+.|||.... .+.+...++++... +.-.+..|+..+..+. .+ +
T Consensus 93 ~~~~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~----~~~~~~ki~~~d~~~~~~~~~ 168 (277)
T d1nofa2 93 YSAYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQG----SKFGSLKVIVAESLGFNPALT 168 (277)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHG----GGGTTSEEEEEEETTCCGGGT
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhh----hcccccceEeehhcCCcHHHh
Confidence 9999999999999998653 577889999998742 12344555544332 1222345555442221 11 1
Q ss_pred hhhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHH
Q 009560 385 LELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQD 463 (532)
Q Consensus 385 ~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~ 463 (532)
...+..+ ...--..+.+|.|.--. . .. . ..+..+++++++|.+........+-+....
T Consensus 169 ~~~l~d~~a~~~v~~ia~H~Y~~~~---~---~~--~-------------~~~~~~K~lw~TE~~~~~~~~~~~w~~a~~ 227 (277)
T d1nofa2 169 DPVLKDSDASKYVSIIGGHLYGTTP---K---PY--P-------------LAQNAGKQLWMTEHYVDSKQSANNWTSAIE 227 (277)
T ss_dssp HHHHTCHHHHTTCCEEEEECTTSCC---C---CC--H-------------HHHHTTCEEEEEEECSCTTSCTTCHHHHHH
T ss_pred HHHhhChHHHHHHHHhhccCCCCCc---c---cc--h-------------hhhCCCccceeEEeeccCCCCcccHHHHHH
Confidence 2222111 11223579999995311 1 00 0 011246789999987543222334455566
Q ss_pred HHHHHHHHHHhCCCcEEEEcccC
Q 009560 464 FGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 464 ~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+.+.....+....-+|.+|....
T Consensus 228 ~a~~i~~~l~~~~~a~~~W~~~~ 250 (277)
T d1nofa2 228 VGTELNASMVSNYSAYVWWYIRR 250 (277)
T ss_dssp HHHHHHHHHHTTEEEEEEEESBS
T ss_pred HHHHHHHHHHcCCeeEEEcCCcC
Confidence 66666666665666899996443
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.22 E-value=1.3e-05 Score=80.15 Aligned_cols=157 Identities=17% Similarity=0.235 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHcCCEEE---EEcCCCCCCCCCCCCCCCCCCCCCCC---ChhhHHHHHHHHHHHHHHhCCCCcEEEE
Q 009560 264 SLEALDNALSWAEAYNIKCI---IDLHAAPGSQNGMEHSASRDGTTDWP---ASDYISQTLDVIDFLASRYAKHPALLGI 337 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VI---LDlH~~pGsqn~~~~sg~~~g~~~W~---~~~~~~~~~~~w~~la~ry~~~p~v~g~ 337 (532)
.++..|+++++|+++||.|. |=-|. ..| .+.|. +++..+.+.++++.+++||++. |-.|
T Consensus 58 n~~~~D~~v~~a~~ng~~vrGH~LvW~~--~~~-----------~P~w~~~~~~~~~~~~~~~I~~v~~ry~g~--i~~W 122 (346)
T d1w32a_ 58 SFTNSDRLVSWAAQNGQTVHGHALVWHP--SYQ-----------LPNWASDSNANFRQDFARHIDTVAAHFAGQ--VKSW 122 (346)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECCC--GGG-----------CCTTCSTTCTTHHHHHHHHHHHHHHHTTTT--CSEE
T ss_pred CchHHHHHHHHHHHCCCEEEEEeeecCC--ccc-----------CcccccCCcHHHHHHHHHHHHHHHHhhCCc--ceEE
Confidence 46889999999999999884 33342 111 12233 2456788889999999999974 6679
Q ss_pred EeccCCCCCCCC------------ccc-H-----HHHHHHHHHHHHhhCCCcEEEEeCCCCCCCc---hhhh-------h
Q 009560 338 ELLNEPSAATVP------------LDI-L-----VPYYKQGYQIVRKYSPTAYVIVCQRIGNADP---LELY-------Q 389 (532)
Q Consensus 338 EL~NEP~~~~~~------------~~~-l-----~~~~~~~~~aIR~~~~~~~Viv~~~~~~~~~---~~~~-------~ 389 (532)
|++|||...... ... + ..|++.+.+..|+++|+..+++.+.....+. ..++ .
T Consensus 123 DVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~lv~~L~~ 202 (346)
T d1w32a_ 123 DVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLN 202 (346)
T ss_dssp EEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHH
T ss_pred EEEeeeccccccCccccccccccccchhhhhccChHHHHHHHHHHHHhCCCCEEEeccCCcccCcHHHHHHHHHHHHHHh
Confidence 999999753110 000 1 2578999999999999999988763211111 1222 2
Q ss_pred ccCCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcC-CCcEEEeccCc
Q 009560 390 ANIGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNAN-GPLVFIGEWVN 449 (532)
Q Consensus 390 ~~~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~-g~pv~vGEwG~ 449 (532)
...+-+-+-+..|....+ .+. ..+. +.+..+...+ +.||.|+|+-.
T Consensus 203 ~g~pIDgIG~Q~H~~~~~------p~~----~~~~----~~l~~~~~~g~~l~v~ITElDV 249 (346)
T d1w32a_ 203 NGVPIDGVGFQMHVMNDY------PSI----ANIR----QAMQKIVALSPTLKIKITELDV 249 (346)
T ss_dssp TTCCCCEEEECCEEESSS------SCH----HHHH----HHHHHHHTTCSSCEEEEEEEEE
T ss_pred cCCccceEEEEeeccCCC------CCH----HHHH----HHHHHHHHhCCCceEEEEEEEe
Confidence 224467778888875321 011 2222 2233344332 37899999964
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.21 E-value=2.5e-06 Score=83.62 Aligned_cols=120 Identities=14% Similarity=0.048 Sum_probs=84.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++||+.||++|+|+||+.-+ .. ++ + +.+++.|.++||.|+.++-.. ... .
T Consensus 48 ~~di~l~ke~G~N~IR~~~~----~~--~p-~---------~~f~d~cD~~GilV~~e~~~~---~~~-----------~ 97 (348)
T d2je8a5 48 QTLFRDMKEANMNMVRIWGG----GT--YE-N---------NLFYDLADENGILVWQDFMFA---CTP-----------Y 97 (348)
T ss_dssp HHHHHHHHHTTCCEEEECTT----SC--CC-C---------HHHHHHHHHHTCEEEEECSCB---SSC-----------C
T ss_pred HHHHHHHHHcCCCEEecCCC----CC--CC-C---------HHHHHHHHHCCCEEEeccchh---ccC-----------C
Confidence 78999999999999999321 11 11 1 356789999999999997532 110 1
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC----CC----CcccHHH--------HHHHHHHHHHhhCCCc
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA----TV----PLDILVP--------YYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~----~~----~~~~l~~--------~~~~~~~aIR~~~~~~ 371 (532)
..++...+.+.+-++.+.+|++++|+|++|.+.||+... +. ....... +-......+++.+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (348)
T d2je8a5 98 PSDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDR 177 (348)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCC
Confidence 124678889999999999999999999999999997531 11 1111111 2223456778889998
Q ss_pred EEEEeC
Q 009560 372 YVIVCQ 377 (532)
Q Consensus 372 ~Viv~~ 377 (532)
++...+
T Consensus 178 ~~~~~~ 183 (348)
T d2je8a5 178 FYVHSS 183 (348)
T ss_dssp EEESSB
T ss_pred ceecCC
Confidence 877654
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.02 E-value=0.0001 Score=73.91 Aligned_cols=161 Identities=14% Similarity=0.124 Sum_probs=96.1
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccc---cCCC---CCCC---C---CcChHHHHHHHHHHHHHcCCEEEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIA---FDPD---PPAP---F---IGGSLEALDNALSWAEAYNIKCIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~---~~~~---~~~~---~---~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pG 291 (532)
.+-++.||+++...+|.|=+ .+.+ ..|. |+.. + ....+ -+|+.+++|++-|..++|.+..-.|
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~-G~~Ef~~~~~~~gaep~~~vn~g~~ 115 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEI-GLNEFMDWAKMVGAEVNMAVNLGTR 115 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSS-CHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCC-CHHHHHHHHHHhCCeEEEEEeCCCc
Confidence 68899999999999999853 1222 2121 1100 0 00112 3789999999999999998875211
Q ss_pred CCCCCCCCCCCCCCCCCCChhhHHHHHHHH--------HHHHHHhCC-CC-cEEEEEeccCCCCC----CCCcccHHHHH
Q 009560 292 SQNGMEHSASRDGTTDWPASDYISQTLDVI--------DFLASRYAK-HP-ALLGIELLNEPSAA----TVPLDILVPYY 357 (532)
Q Consensus 292 sqn~~~~sg~~~g~~~W~~~~~~~~~~~~w--------~~la~ry~~-~p-~v~g~EL~NEP~~~----~~~~~~l~~~~ 357 (532)
..+....++++. ..+-.+... .| .|--|||-||+..+ ..+.+.+...+
T Consensus 116 ------------------~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~~~ 177 (367)
T d1qw9a2 116 ------------------GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIA 177 (367)
T ss_dssp ------------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHH
T ss_pred ------------------cHHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHHHH
Confidence 122223333333 223223221 23 57779999998753 23457788889
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCCC--CCchhhhhcc---CCCCcEEEEeeecccC
Q 009560 358 KQGYQIVRKYSPTAYVIVCQRIGN--ADPLELYQAN---IGLHNIVVDLHYYNLF 407 (532)
Q Consensus 358 ~~~~~aIR~~~~~~~Viv~~~~~~--~~~~~~~~~~---~~~~nvv~s~H~Y~~f 407 (532)
++..++||+.+|+..|+.++.... ....+|.... ....=..+++|+|...
T Consensus 178 ~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~~~~~iD~is~H~Y~~~ 232 (367)
T d1qw9a2 178 CEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHTYDHVDYISLHQYYGN 232 (367)
T ss_dssp HHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHHGGGCSEEEEEEEECC
T ss_pred HHHHHHHhhcCCCeeEEEEeCCCCCCcccchHHHHHHhhccccCCcccccCCCCC
Confidence 999999999999988776543211 1111222110 2333457899999653
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=97.81 E-value=1.1e-05 Score=81.35 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
++|++.||++|+|.|+|+|- |...++..|..| .|+.+|++++.++++||+ |||.+|...|
T Consensus 32 ~~~L~~LK~aGV~gV~vdVw-WGivE~~~Pg~Y---dws~yd~l~~mv~~~GLKi~vvmsfH~cGg 93 (417)
T d1vema2 32 ENDLRWAKQNGFYAITVDFW-WGDMEKNGDQQF---DFSYAQRFAQSVKNAGMKMIPIISTHQCGG 93 (417)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-HHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEeee-eeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 89999999999999999995 778888755677 589999999999999987 5889997544
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.75 E-value=0.00028 Score=70.14 Aligned_cols=233 Identities=13% Similarity=0.084 Sum_probs=125.2
Q ss_pred HcCCCEEEEcccccccc------CCCCCC----CCC--cChHHHHHHHHHHHHH---cCCEEEEEcCCCCCCC--CCCCC
Q 009560 236 RHGINTVRIPVGWWIAF------DPDPPA----PFI--GGSLEALDNALSWAEA---YNIKCIIDLHAAPGSQ--NGMEH 298 (532)
Q Consensus 236 ~~G~N~VRIpv~ww~~~------~~~~~~----~~~--~~~l~~Ld~~v~~a~k---~Gi~VILDlH~~pGsq--n~~~~ 298 (532)
-+|++.+|++|+--.+. ...++. .+. ...-+....+++.|++ .+|+|+.+.-.+|+.. |+...
T Consensus 36 Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~aspWSpP~wMk~n~~~~ 115 (354)
T d2nt0a2 36 GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVN 115 (354)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSSS
T ss_pred CceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcCCCCchhhhcCCccc
Confidence 58999999999631110 011111 111 1111222335555555 4689999988888742 22111
Q ss_pred CCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCC-cEEEEEeccCCCCC----------CCCcccHHHHHHH-HHHHHHh
Q 009560 299 SASRDGTTDWPASDYISQTLDVIDFLASRYAKHP-ALLGIELLNEPSAA----------TVPLDILVPYYKQ-GYQIVRK 366 (532)
Q Consensus 299 sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p-~v~g~EL~NEP~~~----------~~~~~~l~~~~~~-~~~aIR~ 366 (532)
.+.... .=..++..+.+.+++..+++.|+.+. .|-++.+.|||... ..+.+...+++.+ +..++++
T Consensus 116 ~~~~~~--~~l~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~~ 193 (354)
T d2nt0a2 116 GKGSLK--GQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLAN 193 (354)
T ss_dssp SSCBBS--SCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHT
T ss_pred CCCCcC--CccchhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 111100 01235678889999999999998763 56678899999641 1245677888865 6778888
Q ss_pred hCCCcEE-EE-eCCCCC-CCc-hhhhhcc-CCCCcEEEEeeecccCCCccccCChhhhHHHHHHHHHHHHHHHH-hcCCC
Q 009560 367 YSPTAYV-IV-CQRIGN-ADP-LELYQAN-IGLHNIVVDLHYYNLFDTFFVNMSTVDNILFIYKSREAQLQALN-NANGP 440 (532)
Q Consensus 367 ~~~~~~V-iv-~~~~~~-~~~-~~~~~~~-~~~~nvv~s~H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~-~~~g~ 440 (532)
.+....+ +. ...... .+. ...+..+ ....-.++.+|.|.-... ..... +..+. +..++
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~v~~ia~H~Y~~~~~--------~~~~~--------~~~~~~~~p~k 257 (354)
T d2nt0a2 194 STHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLA--------PAKAT--------LGETHRLFPNT 257 (354)
T ss_dssp STTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSCC--------CHHHH--------HHHHHHHCTTS
T ss_pred cCCCceEEEeeCCcccchHHHHHHHhcCHhHHHhcCeEEEecCCCCCC--------chhHH--------HHHHHHhCCCc
Confidence 7765433 33 221111 111 1122111 112234799999964111 01111 11112 23478
Q ss_pred cEEEeccCcccCCC-----CCCHHHHHHHHHHHHHHHHhCCCcEEEEcccC
Q 009560 441 LVFIGEWVNEWNVT-----SGTQKDYQDFGSAQLEVYNAASFGWAYWTLKN 486 (532)
Q Consensus 441 pv~vGEwG~~~~~~-----~a~~~~~~~~~~~ql~~~~~~~~Gw~yW~~k~ 486 (532)
+++.+|.+...... ......-..+.+..+.-+....-+|.+|.+-.
T Consensus 258 ~~w~TE~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~a~~~W~l~~ 308 (354)
T d2nt0a2 258 MLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLAL 308 (354)
T ss_dssp EEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEE
T ss_pred eEEeeeeccCCCCCCcccccCcHHHHHHHHHHHHHHHHhhhhhheehhhhc
Confidence 89999987532111 12233344556666666665667999997643
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=0.00032 Score=57.89 Aligned_cols=102 Identities=22% Similarity=0.376 Sum_probs=77.9
Q ss_pred eEEEEEecCCeEEEE--ecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeCCCceEEEeecCCCCCceE
Q 009560 68 QVQIKSVTLEKYVCA--ESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDGEGCVVSATAKSPSTPETF 145 (532)
Q Consensus 68 ~v~~~s~~~~~yv~a--e~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F 145 (532)
||.|+|+...+|+=. +.+ .-|.++++..=+=|+--....-++.++|+++|++|+. +.| .|+ +.|.+.+.|
T Consensus 1 Qvnl~Sv~rkrYahls~~~~--~ei~vD~~vPWG~d~litL~f~~grY~L~t~~~ryL~--~~G-~Lv---~~~~~~t~F 72 (119)
T d1dfca2 1 QVNIYSVTRKRYAHLSARPA--DEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLR--HDG-RLV---ARPEPATGY 72 (119)
T ss_dssp EEEEEETTTCCEEEECSTTS--SSEEEEESSCCTTTTCEEEEECSSSEEEEETTSCEEC--TTS-CEE---SSCCGGGCE
T ss_pred CceEEcccceeEEEeCCCCC--CeEEEcCCCCcccCcEEEEEEcCCEEEEEeCCCCeEC--CCC-cCc---ccCCCCcEE
Confidence 799999999999964 323 3788888876444554445666889999999999995 455 365 456778999
Q ss_pred EEEEcCCCcEEEEecCCceEEeccC-ceEEeCCC
Q 009560 146 EIERNNDSRVHIKLKSGTYLQATLG-NQLTSDYP 178 (532)
Q Consensus 146 ~~v~~~~~~v~i~a~nG~~l~a~~~-~~v~ad~~ 178 (532)
+++.. +++|.+|..+|+||..... +.+-+..+
T Consensus 73 tle~~-~G~vA~rD~~G~yL~p~G~~g~Lk~gk~ 105 (119)
T d1dfca2 73 TLEFR-SGKVAFRDCEGRYLAPSGPSGTLKAGKA 105 (119)
T ss_dssp EEEEC-SSEEEEEESSSCBEEECSSSCCEEECSC
T ss_pred EEEEe-CCeEEEEcCCCCEEeccCCCceEEcCCC
Confidence 99999 5779999999999987653 55666543
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=97.17 E-value=0.0072 Score=57.50 Aligned_cols=201 Identities=9% Similarity=0.024 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 266 EALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 266 ~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
..+...++.+...|..++|.+.-..+ ....... .+.-+...++.+.|.+ + +.| | .+.+.+|+++
T Consensus 42 ~~~~~~~~~~~~~g~~~~it~~P~~~-----~~~~ia~-------G~yD~~i~~~a~~l~~-~-g~p-v-~~R~~hE~ng 105 (273)
T d2v3ga1 42 SWVRPYADAVYNNGSILMITWEPWEY-----NTVDIKN-------GKADAYITRMAQDMKA-Y-GKE-I-WLRPLHEANG 105 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTC-----CHHHHHT-------TTTHHHHHHHHHHHHH-H-CSC-E-EEEESCCTTS
T ss_pred hhHHHHHHHHHhCCCeEEEEeCCCCC-----CHHHHhC-------cchHHHHHHHHHHHHh-c-CCC-E-EEEecccCCC
Confidence 45667778888999999999873110 0000000 0112233333333333 3 334 3 3789999986
Q ss_pred CC-----------CCcccHHHHHHHHHHHHHhhCCCcEEEEeC--CCCCCCchhhhhccCCCCcE-EEEeeecccCCCcc
Q 009560 346 AT-----------VPLDILVPYYKQGYQIVRKYSPTAYVIVCQ--RIGNADPLELYQANIGLHNI-VVDLHYYNLFDTFF 411 (532)
Q Consensus 346 ~~-----------~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~--~~~~~~~~~~~~~~~~~~nv-v~s~H~Y~~f~~~~ 411 (532)
.- .+++.+.+.++.+++++|+.+.+..+.+=. .....+...+...-++++-| +++++.|.......
T Consensus 106 ~W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYPGDdyVD~vG~d~Y~~~~~~~ 185 (273)
T d2v3ga1 106 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQS 185 (273)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCT
T ss_pred CcccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCCCCCEEEEEEEeccCCCCccc
Confidence 31 245789999999999999987777666522 11111112333333455444 88999997533210
Q ss_pred ccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHH-h--CCCcEEEEcccCCC
Q 009560 412 VNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYN-A--ASFGWAYWTLKNDR 488 (532)
Q Consensus 412 ~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~-~--~~~Gw~yW~~k~e~ 488 (532)
.. ........ .+...+. ..+..++|++|+|||..-. +.++. .|++...+.+. + ...+..|+.... .
T Consensus 186 ~~-~~~~~~~~---~~~~~~~-~~~~~~KPi~i~E~G~~~~--~~~~~---~W~~~~~~~~~~~~p~v~~~vwfn~~~-~ 254 (273)
T d2v3ga1 186 WG-SQWQSFDQ---VFSRAYQ-ALASINKPIIIAEFASAEI--GGNKA---RWITEAYNSIRTSYNKVIAAVWFHENK-E 254 (273)
T ss_dssp TT-CCCCCHHH---HHHHHHH-HHTTSSSCEEEEEEEECST--TSCHH---HHHHHHHHHHHHHCTTEEEEEEECCBS-S
T ss_pred ch-hhhhhHHH---HHHHHHH-HHHhCCCCEEEEeecCCCC--CCchh---HHHHHHHHHHHhhCCcEEEEEEecCCC-C
Confidence 00 00011111 1112222 2345689999999997643 23333 34444444332 1 233444444332 3
Q ss_pred CCCch
Q 009560 489 KHWDF 493 (532)
Q Consensus 489 ~~Ws~ 493 (532)
.+|.+
T Consensus 255 ~Dwr~ 259 (273)
T d2v3ga1 255 TDWRI 259 (273)
T ss_dssp SBCCT
T ss_pred CCCcc
Confidence 34554
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.82 E-value=0.0039 Score=62.20 Aligned_cols=141 Identities=13% Similarity=0.107 Sum_probs=82.1
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCC--C---Cc--ChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAP--F---IG--GSLEALDNALSWAEAYNIKCIIDLH---AAPGSQNGM 296 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~--~---~~--~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsqn~~ 296 (532)
.+-++.||++|+|+|-| ||.-......-+..+ | ++ +..+.|+++|+.|+++||+||||+- ..+.+. .+
T Consensus 37 ~~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~-~~ 115 (420)
T d2bhua3 37 AEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGN-YL 115 (420)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CH
T ss_pred HHhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccccccCCCCc-cc
Confidence 34589999999999997 442111000000011 0 11 4799999999999999999999964 222110 00
Q ss_pred CCCC---------C-CCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHh
Q 009560 297 EHSA---------S-RDGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRK 366 (532)
Q Consensus 297 ~~sg---------~-~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~ 366 (532)
+... . ......|.+++.++.+++.+++..+.|+= ..+- ++..+-- ..+....+.+.+.+++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~GV-DGfR-~D~~~~l-----~~~~~~~~~~~~~~~~~~ 188 (420)
T d2bhua3 116 SSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHF-DGLR-LDATPYM-----TDDSETHILTELAQEIHE 188 (420)
T ss_dssp HHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCC-SEEE-ETTGGGC-----CCCSSSCHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccChHHHHHHHHHhheeeecccc-cEEE-Eeeeeee-----ccccccccHHHHHHHHHh
Confidence 0000 0 00112355788899999988888776642 1221 3332211 111223356778889999
Q ss_pred hCCCcEEEEe
Q 009560 367 YSPTAYVIVC 376 (532)
Q Consensus 367 ~~~~~~Viv~ 376 (532)
.+|+.+++-+
T Consensus 189 ~~p~~~~i~E 198 (420)
T d2bhua3 189 LGGTHLLLAE 198 (420)
T ss_dssp TCSCCEEEEE
T ss_pred hcCCceeeec
Confidence 9999887655
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=96.80 E-value=0.024 Score=54.63 Aligned_cols=240 Identities=13% Similarity=0.100 Sum_probs=123.5
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.||++|++.||| | +. +. ++++.+++.||+|+|.+-.. +- ..
T Consensus 16 ~~Vv~llks~~i~~VRl---Y----~~------d~-------~vL~A~~~~gi~v~lGv~n~-------~l-------~~ 61 (306)
T d1ghsa_ 16 SDVVQLYRSKGINGMRI---Y----FA------DG-------QALSALRNSGIGLILDIGND-------QL-------AN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SC------CH-------HHHHHTTTSCCEEEEECCGG-------GH-------HH
T ss_pred HHHHHHHHhCCCCEEEE---e----CC------CH-------HHHHHHHhcCCEEEEEeccc-------hh-------hh
Confidence 45567788999999998 1 22 11 35667788999999976421 00 00
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEE-EeCC---CCCCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVI-VCQR---IGNAD 383 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Vi-v~~~---~~~~~ 383 (532)
+ ....+...+-.+.....|.....|-++-+-||-... ....+...++.+.+++++.+-..+.+ +... .....
T Consensus 62 ~--~~~~~~a~~~v~~~i~~~~~~~~I~~I~VGNEvl~~--~~~~l~~a~~~i~~al~~~gl~~i~v~t~~~~~~~~~~~ 137 (306)
T d1ghsa_ 62 I--AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGG--ATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSF 137 (306)
T ss_dssp H--HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCS
T ss_pred h--ccCHHHHHHHHHHHHHhhCCCceEEEEEecceeccC--CcchhHHHHHHHHHHHHHCCCCCceeecccccccccCCC
Confidence 0 122333333334434456555668888899997643 34578888899999999887654322 2111 11111
Q ss_pred c-----------hhhhhc-cCCCCcEEEEeeecccCC--Cc--------cc----------cCChhhhHHHHHHHHHHHH
Q 009560 384 P-----------LELYQA-NIGLHNIVVDLHYYNLFD--TF--------FV----------NMSTVDNILFIYKSREAQL 431 (532)
Q Consensus 384 ~-----------~~~~~~-~~~~~nvv~s~H~Y~~f~--~~--------~~----------~~~~~~~i~~i~~~~~~~~ 431 (532)
| ....++ ....+-+.+..|+|..+. .. |. +.......+.+.+.....+
T Consensus 138 p~s~~~f~~~~~~~~~~~L~~~~d~~~vN~yPyf~~~~~~~~~~l~~alf~~~~~~~~~~~~~~y~n~~d~~~d~~~~A~ 217 (306)
T d1ghsa_ 138 PPSAGVFKNAYMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAAL 217 (306)
T ss_dssp SGGGCEESSTHHHHHHHHHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHHHHHHHH
T ss_pred CCCccccchhhhhHHHHHHHhcCCceEeecchhhhhcCCccccccchhhcCCCCceecCchHHHHHHHHHHHHHHHHHHH
Confidence 1 111111 011233444444443211 00 00 0000111222222222222
Q ss_pred HHHHhcCCCcEEEeccCcccC-CCCCCHHHHHHHHHHHHHHHHh------CCCcEEEEcccCCCCCCch--HhhHhCCcc
Q 009560 432 QALNNANGPLVFIGEWVNEWN-VTSGTQKDYQDFGSAQLEVYNA------ASFGWAYWTLKNDRKHWDF--EWNIRNNYL 502 (532)
Q Consensus 432 ~~~~~~~g~pv~vGEwG~~~~-~~~a~~~~~~~~~~~ql~~~~~------~~~Gw~yW~~k~e~~~Ws~--~~~~~~g~~ 502 (532)
.. ....++||+|||.|=... ...++.+..+.|.+..+...++ .++..++-+.-+| .|.- ....--|++
T Consensus 218 ~~-~~~~~k~ivI~ETGWPS~G~~~as~~na~~y~~~l~~~~~~gt~~r~~~i~~f~FeaFDE--~wK~~~~~E~~wGlf 294 (306)
T d1ghsa_ 218 EK-AGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLINHVGGGTPKKREALETYIFAMFNE--NQKTGDATERSFGLF 294 (306)
T ss_dssp HH-HTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHTTGGGCCSSCCSCCCEEEECSBCC--TTCCSSGGGGGCCSB
T ss_pred Hh-cCCCCCceEEcccccccCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEeeeCc--CCCCCCCccCccccC
Confidence 22 123478999999994322 2356778888888877665543 3466777765554 2321 223445666
Q ss_pred cCCCCC
Q 009560 503 QLGNSP 508 (532)
Q Consensus 503 ~~~~~p 508 (532)
..+.+|
T Consensus 295 ~~d~~~ 300 (306)
T d1ghsa_ 295 NPDKSP 300 (306)
T ss_dssp CTTSCB
T ss_pred CCCCCE
Confidence 544444
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=96.53 E-value=0.026 Score=54.46 Aligned_cols=220 Identities=16% Similarity=0.151 Sum_probs=116.3
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.|+++|++.||| | +++ . ++++.++..||+|+|.+-... -..
T Consensus 16 ~~vv~lLk~~~i~~IRl---Y----~~d------~-------~vL~A~~~tgi~v~lGv~n~~--------------l~~ 61 (312)
T d2cyga1 16 SEVVSLYKSNNIARMRL---Y----DPN------Q-------AALQALRNSNIQVLLDVPRSD--------------VQS 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SCC------H-------HHHHHHTTSCCEEEEEECHHH--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---e----CCC------H-------HHHHHHHhcCCEEEEeeccch--------------hhh
Confidence 46677889999999998 1 221 1 356677889999999863200 000
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEeC-----CCCCC
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVCQ-----RIGNA 382 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~~-----~~~~~ 382 (532)
| ....++..+.++.....|.....|-++-+-||+.............++...+++++.+-...|.+.. -+..+
T Consensus 62 ~--~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~~~i~~t~~~~~~~~~~s 139 (312)
T d2cyga1 62 L--ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTS 139 (312)
T ss_dssp H--HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCC
T ss_pred c--cCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCCCCceeeeeeeeeccccC
Confidence 0 0111222233333334565556787888999987543223344456667888899887654333321 11111
Q ss_pred Cc-------hh-------hhhccCCCCcEEEEeeecccCCCc------------ccc---------CChhhhHHHHHHHH
Q 009560 383 DP-------LE-------LYQANIGLHNIVVDLHYYNLFDTF------------FVN---------MSTVDNILFIYKSR 427 (532)
Q Consensus 383 ~~-------~~-------~~~~~~~~~nvv~s~H~Y~~f~~~------------~~~---------~~~~~~i~~i~~~~ 427 (532)
.| .+ ..++ ....+..+.+|.|+.|... |.. ....+..+...+..
T Consensus 140 ~p~sa~~~~~~~~~~l~~~~~f-l~~~~~~~~~n~ypy~~~~~~~~~~~l~~a~f~~~~~~~~~~~~~y~n~~d~~~d~~ 218 (312)
T d2cyga1 140 YPPSAGAFSSAAQAYLSPIVQF-LASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIVDAV 218 (312)
T ss_dssp SSGGGCCBCHHHHHHHHHHHHH-HHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHHHHH
T ss_pred CCCccccccchhHHHHHHHHHH-HHhcCCeeeEeccchhhhccCcccccchhhhccCCCccccccHHHHHHHHHHHHHHH
Confidence 11 00 1111 1112223455555544210 000 00111222222222
Q ss_pred HHHHHHHHh--cCCCcEEEeccCcccC--CCCCCHHHHHHHHHHHHHHHHh-------CCCcEEEEcccCC
Q 009560 428 EAQLQALNN--ANGPLVFIGEWVNEWN--VTSGTQKDYQDFGSAQLEVYNA-------ASFGWAYWTLKND 487 (532)
Q Consensus 428 ~~~~~~~~~--~~g~pv~vGEwG~~~~--~~~a~~~~~~~~~~~ql~~~~~-------~~~Gw~yW~~k~e 487 (532)
.. .+.+ ..++|++|+|-|=... ...++.+..+.|.+..+...++ .++..++-+.-+|
T Consensus 219 ~~---a~~~~g~~~~~ivI~EtGWPs~G~~~~as~~na~~y~~~l~~~~~~gtp~~~~~~i~~f~FeaFDE 286 (312)
T d2cyga1 219 FA---ALERVGGANVAVVVSESGWPSAGGGAEASTSNAQTYNQNLIRHVGGGTPRRPGKEIEAYIFEMFNE 286 (312)
T ss_dssp HH---HHHTTTCTTCCEEEEEECCCSSSSSTTSSHHHHHHHHHHHHHHGGGCCSSSCSSCCCEEESCSBCC
T ss_pred HH---HHHHhCCCCCceEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCCCCccEEEEeEeCC
Confidence 22 2333 3468999999995432 1246677788888888776665 5677777766654
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.42 E-value=0.024 Score=55.31 Aligned_cols=134 Identities=15% Similarity=0.197 Sum_probs=79.9
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCCCCCCC-----C--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCC-----
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPF-----I--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGS----- 292 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~-----~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGs----- 292 (532)
+.++.|+++|+|+|=| ||.-. ....+..+. + -+..+.|+++|+.|+++||+||+|+ |..+.+
T Consensus 57 ~kldyl~~LGv~~i~L~Pi~~~--~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~ 134 (382)
T d1j0ha3 57 DHLDYLVDLGITGIYLTPIFRS--PSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQD 134 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEEC--SSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHH
T ss_pred HhHHHHHHcCCCEEEeCCCCcC--CcccCCCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchh
Confidence 4578999999999998 55211 000011111 1 1578999999999999999999997 222110
Q ss_pred ---------CCCC--------CC--CCCC--------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 293 ---------QNGM--------EH--SASR--------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 293 ---------qn~~--------~~--sg~~--------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.+.+ .. .... .....+.+++.++...+..+...+.|+ |=||-+=.=+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~g----iDGfR~Da~~-- 208 (382)
T d1j0ha3 135 VWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFD----IDGWRLDVAN-- 208 (382)
T ss_dssp HHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHC----CCEEEETTGG--
T ss_pred hhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhcc----ccEEEecchh--
Confidence 0000 00 0000 001234467788888888888888775 2233332222
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEE
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
....++.+...+++++..|+..++.
T Consensus 209 -----~~~~~~~~~~~~~~~~~~p~~~~i~ 233 (382)
T d1j0ha3 209 -----EIDHEFWREFRQEVKALKPDVYILG 233 (382)
T ss_dssp -----GSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -----hcchhhhhhhhhhhhccCCCccccc
Confidence 2235566778888999999886554
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=96.27 E-value=0.023 Score=54.63 Aligned_cols=105 Identities=13% Similarity=0.132 Sum_probs=67.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCCCCCCCCCCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQNGMEHSASRDGTTD 307 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsqn~~~~sg~~~g~~~ 307 (532)
++-++.||++|++.||| | +++ + ++++.++..||+|+|.+-... ...
T Consensus 16 ~~Vv~lLk~~~i~~IRl---Y----~~d---~----------~vL~A~~~~gi~v~lGv~n~~--------------l~~ 61 (306)
T d1aq0a_ 16 STVVSMFKSNGIKSMRL---Y----APN---Q----------AALQAVGGTGINVVVGAPNDV--------------LSN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SCC---H----------HHHHHHTTSCCEEEEEECGGG--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---e----CCC---H----------HHHHHHHhcCCEEEEeccchh--------------hhh
Confidence 56677889999999998 1 221 1 466778899999999874310 000
Q ss_pred CCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCc
Q 009560 308 WPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTA 371 (532)
Q Consensus 308 W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~ 371 (532)
+ ....++..+..+...+.| ....|-++-+-||.... ....+...++.+.+++++.+-+.
T Consensus 62 ~--~~~~~~~~~~v~~~v~~~-~~~~I~~i~VGNE~~~~--~~~~l~~a~~ni~~al~~~gl~~ 120 (306)
T d1aq0a_ 62 L--AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAGG--ATRNLVPAMKNVHGALVAAGLGH 120 (306)
T ss_dssp H--HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHTTCTT
T ss_pred c--cCCHHHHHHHHHHhcccc-CCceEEEEEeccEeecC--CccchhhHHHHHHHHHHHCCCCc
Confidence 0 123344444444444444 34567778899999753 34567777888888999877554
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=96.24 E-value=0.023 Score=47.64 Aligned_cols=98 Identities=7% Similarity=0.041 Sum_probs=66.0
Q ss_pred EEEEecCCeEEEEec-CCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCc-eEEEeecCCCCCceEE
Q 009560 70 QIKSVTLEKYVCAES-GGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGC-VVSATAKSPSTPETFE 146 (532)
Q Consensus 70 ~~~s~~~~~yv~ae~-gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~-~~~a~~~~~~~~e~F~ 146 (532)
.||+...|||+..+. +|+..+..--..-+.-.++++... ++.+.||. +.|+++.+++..+ .++.-.+.....++|.
T Consensus 4 ~I~N~~sGk~L~v~~~~~~~~~~~~~~~~~~~qqW~~~~~-~g~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~~~~qqW~ 82 (131)
T d1upsa2 4 LIRNRQTGKFLYIEENNDKVSYGDITLKNEKNAKWSKEYR-DGYTLLKNNETGEYLNIENQTGYIEHGKVPKTWWSAQWS 82 (131)
T ss_dssp EEEETTTCCEEECCTTCSSCEEECCCTTTTGGGCEEEEEE-TTEEEEEETTTCCEEECTTCCSBCEEECCCTTCGGGCEE
T ss_pred EEEEccCCcEEEEeCCCCcEEEeccccCCCcccEEEEEeC-CCEEEEEECCCCcEEEccCCCCceEEEccCCCChhHeEE
Confidence 588899999999543 433333322222233345666666 68899999 8899999886555 4555556666789999
Q ss_pred EEEcCCCcEEEEe--cCCceEEecc
Q 009560 147 IERNNDSRVHIKL--KSGTYLQATL 169 (532)
Q Consensus 147 ~v~~~~~~v~i~a--~nG~~l~a~~ 169 (532)
|+.. ++.++|+- +.|++|.++.
T Consensus 83 l~~~-gg~~~i~n~~~s~~~L~v~~ 106 (131)
T d1upsa2 83 EVPV-DGYTRFVNRWKPNMSIHTES 106 (131)
T ss_dssp EEEE-TTEEEEEESSSTTCEEECTT
T ss_pred EEec-CCcEEEEEeccCCeEEEEec
Confidence 9987 45666654 4588887764
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=96.14 E-value=0.036 Score=54.69 Aligned_cols=137 Identities=9% Similarity=-0.044 Sum_probs=78.5
Q ss_pred HHHHHHHHcCCCEEEE-cccccc-------ccCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC-
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWI-------AFDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQN- 294 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~-------~~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn- 294 (532)
+-++.||++|+|+|-| ||.-.. ..++......+ -+..+.|+++|+.|+++||+||||+ |..+.+..
T Consensus 57 ~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~ 136 (422)
T d1h3ga3 57 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWM 136 (422)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGG
T ss_pred HhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCCccccCCcccccCCHHHHHHHHHHHHHhCccccccCccccccccchhh
Confidence 4578999999999997 441000 00000000001 1578999999999999999999997 32221100
Q ss_pred --C----CCCCCCC--------------------------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEE
Q 009560 295 --G----MEHSASR--------------------------------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLG 336 (532)
Q Consensus 295 --~----~~~sg~~--------------------------------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g 336 (532)
. +...+.. .....+.+++.++...+.++...++|+= ..+-
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~~~~~~~~w~~~~gv-DGfR- 214 (422)
T d1h3ga3 137 KDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGL-SGLR- 214 (422)
T ss_dssp GSCSSTTSBSCCSSCCBCCCCGGGGSCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTC-SEEE-
T ss_pred ccccccccccccccccccccccccccccccccCcccceeecccccCccccccccHHHHHHHhhhHHHHhhheee-eeee-
Confidence 0 0000000 0011233567788888888888888752 1221
Q ss_pred EEeccCCCCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 337 IELLNEPSAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 337 ~EL~NEP~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
++... ..-..+.+...++|++..|+..++-+
T Consensus 215 ~Da~~---------~~~~~f~~~~~~~~~~~~~~~~~i~E 245 (422)
T d1h3ga3 215 IDTYG---------YSDGAFLTEYTRRLMAEYPRLNMVGE 245 (422)
T ss_dssp ETTGG---------GSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ecccc---------cccchhhhhhhhhhhhccccceEEee
Confidence 22221 12345677788889999998765543
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=95.97 E-value=0.073 Score=51.46 Aligned_cols=137 Identities=15% Similarity=0.204 Sum_probs=79.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccC-----CCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC---CCCCC-----
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFD-----PDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH---AAPGS----- 292 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~-----~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGs----- 292 (532)
.+.++.||++|+|+|-|+=-+ .... +......++ +..+.|+++|+.|.++||+||+|+= ..+..
T Consensus 54 ~~kLdylk~LGv~~i~l~Pi~-~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~ 132 (382)
T d1ea9c3 54 IDHLDHLSKLGVNAVYFTPLF-KATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVD 132 (382)
T ss_dssp HHTHHHHHHHTCSEEEECCCS-SCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHH
T ss_pred HHhhHHHHhCCCCEEEeCCCc-cCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEeeecccccccCcchhh
Confidence 355789999999999983212 1100 110111111 4789999999999999999999973 21100
Q ss_pred ---------CCCCCCCCC-----CC--------------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCC
Q 009560 293 ---------QNGMEHSAS-----RD--------------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPS 344 (532)
Q Consensus 293 ---------qn~~~~sg~-----~~--------------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~ 344 (532)
...+-+... .. ....+.+++.++...+......++|+ |-||-+-.=
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~g----vDGfR~Da~-- 206 (382)
T d1ea9c3 133 VLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETG----IDGWRLDVA-- 206 (382)
T ss_dssp HHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHC----CSEEEETTC--
T ss_pred hhhcCCcccccccccccccccccccCcccccccccccccCccccccHHHHHHHHHHHhhccccee----eeEEEecch--
Confidence 000000000 00 01123456778888888888888774 223322111
Q ss_pred CCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 345 AATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 345 ~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
......+.+...+++++..|+.+++.+
T Consensus 207 -----~~~~~~~~~~~~~~~~~~~p~~~~~~e 233 (382)
T d1ea9c3 207 -----NEVSHQFWREFRRVVKQANPDAYILGE 233 (382)
T ss_dssp -----TTSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -----hhCchhhhhhhhhhhhhcCCCeeEEee
Confidence 112345567778889999998876654
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=95.86 E-value=0.033 Score=54.48 Aligned_cols=135 Identities=15% Similarity=0.234 Sum_probs=72.6
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCCC--
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPGSQN-- 294 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsqn-- 294 (532)
.+.++.|+++|+|+|=| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+ |..+-+..
T Consensus 32 ~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~VilD~V~NH~s~~~~~~~ 111 (400)
T d1eh9a3 32 IRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYMV 111 (400)
T ss_dssp HHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHH
T ss_pred HHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCCceeeecccccccCCCcchh
Confidence 35689999999999999 442100 011111111122 579999999999999999999997 43322110
Q ss_pred ---CCCCCCCCC------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcccHHHHHHHHHHHHH
Q 009560 295 ---GMEHSASRD------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLDILVPYYKQGYQIVR 365 (532)
Q Consensus 295 ---~~~~sg~~~------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~~l~~~~~~~~~aIR 365 (532)
.+....... ....+.++..++.+.+.++...+.|+= ..+- ++..+-.. ......+.+++.+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~np~v~~~l~d~~~~Wl~~~gv-DGfR-~Daa~~i~-----~~~~~~~~~~~~~~~~ 184 (400)
T d1eh9a3 112 KLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNV-DGFR-LDAVHAII-----DTSPKHILEEIADVVH 184 (400)
T ss_dssp HHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCC-CCEE-ETTGGGCC-----CCSSSCHHHHHHHHHH
T ss_pred hhccccccccccccccccccccccccHHHHHHHHHHHHHHhhccc-ceEE-eechhhhc-----chhhhhhHHHHHHHHh
Confidence 000000000 111223466777777777776666532 2221 33332221 1122234566667777
Q ss_pred hhCC
Q 009560 366 KYSP 369 (532)
Q Consensus 366 ~~~~ 369 (532)
+.++
T Consensus 185 ~~~~ 188 (400)
T d1eh9a3 185 KYNR 188 (400)
T ss_dssp HTTC
T ss_pred hhhh
Confidence 7665
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=95.76 E-value=0.075 Score=51.44 Aligned_cols=136 Identities=18% Similarity=0.216 Sum_probs=77.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccc---cCCCCCCCCC--cChHHHHHHHHHHHHHcCCEEEEEc---CCCCCCC-----
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIA---FDPDPPAPFI--GGSLEALDNALSWAEAYNIKCIIDL---HAAPGSQ----- 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~---~~~~~~~~~~--~~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pGsq----- 293 (532)
.+-++.||++|+|+|-| ||.-... ..+......+ -+..+.++++|+.|.++||+||+|+ |..+...
T Consensus 56 ~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~ 135 (382)
T d1wzla3 56 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDV 135 (382)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEeeeeecccccccccccch
Confidence 45678999999999998 5521100 0000000001 1478999999999999999999994 3322100
Q ss_pred ------CC------CC-CC--CC-C------------CCCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCC
Q 009560 294 ------NG------ME-HS--AS-R------------DGTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSA 345 (532)
Q Consensus 294 ------n~------~~-~s--g~-~------------~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~ 345 (532)
.. .. +. .. . .....+.+++.++...+..+...+ + + |-||-+-..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~-~-g---vDGfR~D~~~~- 209 (382)
T d1wzla3 136 LQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWME-Q-G---IDGWRLDVANE- 209 (382)
T ss_dssp HHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHH-T-T---CCEEEETTGGG-
T ss_pred hhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHH-c-C---CCceeecchhh-
Confidence 00 00 00 00 0 001123456677777776666654 3 2 33343433332
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEE
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIV 375 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv 375 (532)
....+.+.....+++..|+..++-
T Consensus 210 ------~~~~~~~~~~~~~~~~~p~~~~i~ 233 (382)
T d1wzla3 210 ------VDHAFWREFRRLVKSLNPDALIVG 233 (382)
T ss_dssp ------SCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ------cchhhhhHHHHHHHhhCCceEEee
Confidence 245677788889999999876553
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=95.75 E-value=0.037 Score=52.53 Aligned_cols=60 Identities=13% Similarity=0.214 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc---ccCCCCCCCCC---cChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI---AFDPDPPAPFI---GGSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~---~~~~~~~~~~~---~~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+-++.||++|+|+|-| |+.--. ..++......+ -+.++.|+++|+.|.++||+||||+-
T Consensus 24 ~~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 24 MGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV 90 (347)
T ss_dssp HTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeecc
Confidence 35588999999999999 331100 01111111112 25789999999999999999999984
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.70 E-value=0.009 Score=57.54 Aligned_cols=59 Identities=19% Similarity=0.122 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCC---C-----------CCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPP---A-----------PFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~---~-----------~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.||++|+++|-| |+.-......... . ..++ +..+.|+++|+.|.++||+||||+
T Consensus 26 ~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~VilDv 101 (390)
T d1ud2a2 26 HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (390)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceEEEE
Confidence 45589999999999998 4421000000000 0 1111 468999999999999999999997
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.025 Score=46.17 Aligned_cols=88 Identities=17% Similarity=0.319 Sum_probs=62.9
Q ss_pred cccCccccccccCCcccccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEecCCeEEEEeC
Q 009560 48 GWIKPSLFDGILNGDMLDGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRTSQGQFLTCDG 127 (532)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~~~~~~v~~~~ 127 (532)
+|=.-++|.-. +.| ....|+. .||||++. .| .|+. ..+.--.|. .++-.+.++||..+|+|++..+
T Consensus 30 PWG~d~litL~----f~~-grY~L~t-~~~ryL~~--~G--~Lv~---~~~~~t~Ft-le~~~G~vA~rD~~G~yL~p~G 95 (119)
T d1dfca2 30 PWGVDSLITLA----FQD-QRYSVQT-ADHRFLRH--DG--RLVA---RPEPATGYT-LEFRSGKVAFRDCEGRYLAPSG 95 (119)
T ss_dssp CCTTTTCEEEE----ECS-SSEEEEE-TTSCEECT--TS--CEES---SCCGGGCEE-EEECSSEEEEEESSSCBEEECS
T ss_pred CcccCcEEEEE----EcC-CEEEEEe-CCCCeECC--CC--cCcc---cCCCCcEEE-EEEeCCeEEEEcCCCCEEeccC
Confidence 46666666532 223 4788996 89999995 22 4543 233335577 6777788999999999999986
Q ss_pred CCceEEEeec-CCCCCceEEEEE
Q 009560 128 EGCVVSATAK-SPSTPETFEIER 149 (532)
Q Consensus 128 ~g~~~~a~~~-~~~~~e~F~~v~ 149 (532)
.-+.+.+.+. .+|.-|.|.+++
T Consensus 96 ~~g~Lk~gk~~~~gkdElF~Le~ 118 (119)
T d1dfca2 96 PSGTLKAGKATKVGKDELFALEQ 118 (119)
T ss_dssp SSCCEEECSCSSCCSTTCEEEEE
T ss_pred CCceEEcCCCCCCCceeEEEeec
Confidence 5446989864 599999999986
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=95.39 E-value=0.08 Score=50.65 Aligned_cols=58 Identities=21% Similarity=0.165 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCCEEEEcccccccc--------------CCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAF--------------DPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~--------------~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.||++|+++|=|+-.+.... ++... ..++ +..+.|+++|+.|.++||+||+|+
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy-~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~ 113 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDF-NKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSS-CSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhc-ccCccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 5678999999999999864332111 11100 1111 478999999999999999999996
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.23 E-value=0.013 Score=57.66 Aligned_cols=60 Identities=17% Similarity=0.121 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccC------------CCCC---CCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFD------------PDPP---APFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~------------~~~~---~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
++.++.||++|+|+|-|+=-+..... ..+. ...++ +..+.|+++|+.|.++||+||||+=
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDvV 103 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 67889999999999999432211000 0000 00111 4689999999999999999999953
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=94.95 E-value=0.016 Score=56.31 Aligned_cols=60 Identities=15% Similarity=0.268 Sum_probs=42.4
Q ss_pred CCHHHHHHHHHcCCCEEEEcccc--------ccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 226 ITIEDFNFLYRHGINTVRIPVGW--------WIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 226 ite~d~~~la~~G~N~VRIpv~w--------w~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
|.++-.+.||++|+++|=||=.. |...++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 16 i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy-~vd~~~Gt~~dfk~LV~~aH~~GI~VilDv 85 (354)
T d1g94a2 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSY-ELQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (354)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcc-eeCCCCCCHHHHHHHHHHHhccCceeEEEe
Confidence 34455567999999999995422 222333221 1222 479999999999999999999995
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=94.89 E-value=0.016 Score=55.86 Aligned_cols=147 Identities=10% Similarity=0.050 Sum_probs=78.2
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc-----ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC---CCCCCCCC-
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI-----AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH---AAPGSQNG- 295 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~-----~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH---~~pGsqn~- 295 (532)
++-++.|+++|+|+|-| ||.-.. ..++......++ +..+.|+++|+.|.++||+||||+= ..+.....
T Consensus 44 ~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~ 123 (396)
T d1m7xa3 44 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA 123 (396)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSST
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhcccccccCCcccccc
Confidence 45579999999999999 331000 000000000112 4789999999999999999999963 32211000
Q ss_pred ----CCCCCCCCC-----------CCCCCChhhHHHHHHHHHHHHHHhCCCCcEE----------EE-----EeccCCCC
Q 009560 296 ----MEHSASRDG-----------TTDWPASDYISQTLDVIDFLASRYAKHPALL----------GI-----ELLNEPSA 345 (532)
Q Consensus 296 ----~~~sg~~~g-----------~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~----------g~-----EL~NEP~~ 345 (532)
++.....+. ...+.++..++...+........|+-....+ .+ .+.++..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~- 202 (396)
T d1m7xa3 124 EFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFG- 202 (396)
T ss_dssp TGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCSHHHHCC--------------C-
T ss_pred cccCCccccccCCCCCCCCCCCCccccCCCchhHHHHHHHHHHHHHHhCCcceeeechhhhccchhccccccccccccc-
Confidence 000000000 1122356666666666666666664321100 00 0011111
Q ss_pred CCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 346 ATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 346 ~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
........++.+.....++...|+..++.+
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 232 (396)
T d1m7xa3 203 -GRENLEAIEFLRNTNRILGEQVSGAVTMAE 232 (396)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred -ccccchHHHHHHHHHHHHhhhCCCceEEEe
Confidence 112233556778888999999999887765
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=94.87 E-value=0.018 Score=56.75 Aligned_cols=59 Identities=22% Similarity=0.210 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCC-CC---CC-----------CCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPD-PP---AP-----------FIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~-~~---~~-----------~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.||++|+++|-|+=-+-...... +. .. .++ +..+.|+++|+.|.++||+||+|+
T Consensus 24 ~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 4568999999999999932111111100 00 00 122 468999999999999999999998
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=94.77 E-value=0.018 Score=57.79 Aligned_cols=60 Identities=22% Similarity=0.469 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||++|+..|=++| ||-..+...|..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 31 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 92 (490)
T d1wdpa1 31 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 92 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---ChHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 7899999999999999999 7788887766677 588999999999999997 6778887644
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=94.70 E-value=0.019 Score=56.48 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCC---CCC--------C--cChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPP---APF--------I--GGSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~---~~~--------~--~~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.||++|+|+|-| ||.-....+..++ ..| + -+..+.|+++|+.|+++||+||||+
T Consensus 46 ~~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~ 118 (381)
T d2aaaa2 46 IDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhcccccc
Confidence 45688999999999998 4421100000011 111 1 1478999999999999999999997
|
| >d1jlxa1 b.42.3.1 (A:1-153) Agglutinin {Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Agglutinin family: Agglutinin domain: Agglutinin species: Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]
Probab=94.63 E-value=0.31 Score=40.89 Aligned_cols=113 Identities=14% Similarity=0.164 Sum_probs=75.4
Q ss_pred eEEEEEecCCeEEE--EecCCCce-eEEcCCCCC-CcceEEEEE--ecCCeEEEEe-cCCeEEEEeCCCc-eEEEeecCC
Q 009560 68 QVQIKSVTLEKYVC--AESGGGTD-VSVTRDVAS-SWETFTLWR--VSESEFQFRT-SQGQFLTCDGEGC-VVSATAKSP 139 (532)
Q Consensus 68 ~v~~~s~~~~~yv~--ae~gg~~~-l~anr~~~~-~wE~f~~~~--~~~~~~~lr~-~~~~~v~~~~~g~-~~~a~~~~~ 139 (532)
-|.|||--++||+. ||++-+.+ |-...+.++ +--.|++-- .+++.+.+|+ ++||||..-+.+. =++|.+++|
T Consensus 6 ~v~FKs~n~~kYLry~ae~~e~~~~lqF~~ddI~dP~v~~~ve~~~~~dg~Vhik~~~~nKfWrR~spn~~wI~a~aD~~ 85 (153)
T d1jlxa1 6 IMCLKSNNHQKYLRYQSDNIQQYGLLQFSADKILDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVRWSPNHYWITASANEP 85 (153)
T ss_dssp EEEEEETTTTEEEEECCSSSTTTTBEEEEESSTTCTTCCEEEEECSSSTTCEEEEETTTCCEEEESSTTCCBEEEEESSC
T ss_pred EEEEeccCCCeeEEEEecccccccceEecccccCCcceeEEEEeccCCCceEEEEeccCCceeeeCCCCceEEEecCCCC
Confidence 48999966679998 77664443 444545443 445566433 4478899999 8999997743332 588888887
Q ss_pred CC----C--ceEEEEEcC-C--CcEEEEe-cCCceEEec-----cCceEEeCCCCC
Q 009560 140 ST----P--ETFEIERNN-D--SRVHIKL-KSGTYLQAT-----LGNQLTSDYPGM 180 (532)
Q Consensus 140 ~~----~--e~F~~v~~~-~--~~v~i~a-~nG~~l~a~-----~~~~v~ad~~~~ 180 (532)
.. | .-|.-|+-. + ..++++- .+|.+.+-. ..++|.|.++.+
T Consensus 86 ded~S~~scTLF~Pv~~~d~n~~~lr~~hvq~g~~~~~~r~~~~~~~CL~A~~s~~ 141 (153)
T d1jlxa1 86 DENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYLFAESSQI 141 (153)
T ss_dssp CCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCSTTCCSEEECCCSSC
T ss_pred ccccCCCcceEEEEEEeccCCceEEEEEeeccCceEEEEecCCCccceEeeeeccc
Confidence 65 1 469988863 3 4566555 778887643 235688887754
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=94.53 E-value=0.026 Score=56.64 Aligned_cols=55 Identities=25% Similarity=0.523 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCCCCCC--------Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPF--------IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~--------~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.|+++|+|+|-| ||. . .+....-| ++ +..+.|+++|+.|+++||+||||+
T Consensus 34 ~~kLdyLk~LGv~~I~L~Pi~--~--~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 34 IEKLDYLKSLGIDAIWINPHY--D--SPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HHTHHHHHHHTCCEEEECCCE--E--CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEECCCC--C--CCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 34578999999999998 331 1 11111111 11 579999999999999999999997
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=94.53 E-value=0.025 Score=55.54 Aligned_cols=60 Identities=25% Similarity=0.222 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCC-C---CC-----------CCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDP-P---AP-----------FIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~-~---~~-----------~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
++.++.|+++|+|+|=|+=-+........ . .. .++ +..+.|+++|+.|+++||+||||+-
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDvV 100 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVV 100 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 67789999999999988321111110000 0 01 122 4689999999999999999999973
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=94.51 E-value=0.025 Score=55.58 Aligned_cols=60 Identities=17% Similarity=0.259 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccC---CCCCCCCC----------cChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFD---PDPPAPFI----------GGSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~---~~~~~~~~----------~~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+-++.||++|+|+|=| |+.-..... ..++.+|. -+..+.|+++|+.|+++||+||||+-
T Consensus 46 ~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 119 (381)
T d2guya2 46 IDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeecc
Confidence 35589999999999998 442110000 01111221 25799999999999999999999974
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=94.51 E-value=0.027 Score=56.58 Aligned_cols=54 Identities=26% Similarity=0.518 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCEEEE-ccccccccCCCCCCCC--------Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAFDPDPPAPF--------IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~~~~~~~~~--------~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+-++.||++|+|+|-| ||. . .+....-| ++ +..+.++++|+.|.++||+||||+
T Consensus 35 ~kLdYLk~LGv~~I~l~Pi~--~--~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 35 SKLDYLKELGIDVIWLSPVY--E--SPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp TTHHHHHHHTCCEEEECCCE--E--CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCc--C--CCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 3477999999999998 441 1 11111111 11 579999999999999999999996
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=94.43 E-value=0.022 Score=57.22 Aligned_cols=60 Identities=18% Similarity=0.466 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||++|+..|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|+.-|
T Consensus 37 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 98 (498)
T d1fa2a_ 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---CcHHHHHHHHHHHHcCCeeEEEEeecccCC
Confidence 7899999999999999999 7788887766677 588999999999999997 5678887543
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=94.37 E-value=0.024 Score=56.93 Aligned_cols=60 Identities=20% Similarity=0.468 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCE--EEEEcCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIK--CIIDLHAAPG 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~--VILDlH~~pG 291 (532)
+..++.||++|+..|=++| ||-..+...+..| .|..++++++.+++.||+ |||.+|..-|
T Consensus 30 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 91 (500)
T d1b1ya_ 30 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 91 (500)
T ss_dssp HHHHHHHHHTTCCEEEEEE-ETTTGGGGSTTCC---CCHHHHHHHHHHHHHTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 7899999999999999999 7777777666677 489999999999999997 6778887533
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=94.33 E-value=0.12 Score=51.45 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEE-ccccccc-----------------cCCCCCCCCC---------cChHHHHHHHHHHHHHcCCE
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIA-----------------FDPDPPAPFI---------GGSLEALDNALSWAEAYNIK 281 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~-----------------~~~~~~~~~~---------~~~l~~Ld~~v~~a~k~Gi~ 281 (532)
+-++.|+++|+|+|=| ||.-... ..+......+ .+..+.|+++|+.|+++||+
T Consensus 47 ~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~d~~~vdp~y~~~~~~~Gt~~d~~~LV~~aH~~GIr 126 (475)
T d1bf2a3 47 LKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIK 126 (475)
T ss_dssp HTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCE
T ss_pred hhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcccCCCcCcccccCCCCCCCHHHHHHHHHHHHhcCcE
Confidence 4478999999999998 4421100 0000000011 15789999999999999999
Q ss_pred EEEEcC
Q 009560 282 CIIDLH 287 (532)
Q Consensus 282 VILDlH 287 (532)
||+|+=
T Consensus 127 VilD~V 132 (475)
T d1bf2a3 127 VYMDVV 132 (475)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999963
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=94.28 E-value=0.22 Score=51.39 Aligned_cols=146 Identities=12% Similarity=0.168 Sum_probs=81.8
Q ss_pred HHHHHHHHHcCCCEEEE-cccccc------ccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc---CCCCC----
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWI------AFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL---HAAPG---- 291 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~------~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl---H~~pG---- 291 (532)
.+-++.|+++|+|+|=| ||.-.. ..++......++ +.++.|+++|+.|.++||+||||+ |....
T Consensus 116 ~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~V~NHts~~h~w~ 195 (554)
T d1g5aa2 116 KDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDFIFNHTSNEHEWA 195 (554)
T ss_dssp HTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEECCSEEETTSHHH
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECcCCCCCCccch
Confidence 35578999999999998 442100 000111111122 479999999999999999999997 32110
Q ss_pred ---------CCCC--------------------C--CCCCC----CC------------CCCCCCChhhHHHHHHHHHHH
Q 009560 292 ---------SQNG--------------------M--EHSAS----RD------------GTTDWPASDYISQTLDVIDFL 324 (532)
Q Consensus 292 ---------sqn~--------------------~--~~sg~----~~------------g~~~W~~~~~~~~~~~~w~~l 324 (532)
.++. + ..++. .+ -...|.++..++.+.+....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~V~~~~~~~~~~w 275 (554)
T d1g5aa2 196 QRCAAGDPLFDNFYYIFPDRRMPDQYDRTLREIFPDQHPGGFSQLEDGRWVWTTFNSFQWDLNYSNPWVFRAMAGEMLFL 275 (554)
T ss_dssp HHHHTTCGGGTTSBCEESSSHHHHHHTTTCCCSSTTTCSTTEEECTTSCEEECSSSTTEEEBCTTSHHHHHHHHHHHHHH
T ss_pred hhhhccCCccccceEEcCCCCCCccccCCCcccCCCCCCcceeecCCCceeecccCCcccccccCCHHHHHHHHhhhhhh
Confidence 0000 0 00000 00 011244667777777777777
Q ss_pred HHHhCCCCcEEEEEeccCC----CCCCCCcccHHHHHHHHHHHHHhhCCCcEEEEe
Q 009560 325 ASRYAKHPALLGIELLNEP----SAATVPLDILVPYYKQGYQIVRKYSPTAYVIVC 376 (532)
Q Consensus 325 a~ry~~~p~v~g~EL~NEP----~~~~~~~~~l~~~~~~~~~aIR~~~~~~~Viv~ 376 (532)
++ ++ -. .+-++.+... .......+....+.+.+...++...|+.+++-+
T Consensus 276 ~~-~g-vD-GfRlDa~~~~~~~~~~~~~n~p~~~~~~~~~~~~~~~~~p~~~l~aE 328 (554)
T d1g5aa2 276 AN-LG-VD-ILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSE 328 (554)
T ss_dssp HT-TT-CS-EEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred hh-cc-cc-ccccccchhhccccccccccCchhhHHHHHHHHHHhhhCCCceeecc
Confidence 64 32 12 2223433222 111223345677889999999999998876543
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.22 E-value=0.034 Score=54.09 Aligned_cols=60 Identities=28% Similarity=0.312 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEEccccccc-------cCCCCC---------CCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIA-------FDPDPP---------APFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~-------~~~~~~---------~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
.+.++.||++|+|+|=|+=-+... .++... ...++ +..+.|+++|+.|+++||+||||+-
T Consensus 31 ~~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~V 108 (361)
T d1mxga2 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVV 108 (361)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 577899999999999874211100 010000 01122 3689999999999999999999964
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.16 E-value=0.021 Score=56.37 Aligned_cols=58 Identities=16% Similarity=0.404 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEEccc------------cccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVG------------WWIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~------------ww~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
++-.+.|+++|+++|=||=. ||...++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY-~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 26 LECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSY-KLCTRSGNENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCC-ccCCCCCCHHHHHHHHHHHHhcCCEEEEEE
Confidence 33445699999999999532 2222233221 1122 479999999999999999999996
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=94.07 E-value=0.032 Score=54.40 Aligned_cols=59 Identities=25% Similarity=0.319 Sum_probs=40.2
Q ss_pred HHHHHHHHcCCCEEEE-ccccccc---cCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIA---FDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~---~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
+-++.|+++|+|+|-| |+.-... .++......++ +..+.|+++|+.|+++||+||+|+-
T Consensus 27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~V 91 (391)
T d1lwha2 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (391)
T ss_dssp HTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeeccc
Confidence 4578999999999998 5521100 01100000112 4789999999999999999999963
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=93.64 E-value=0.021 Score=56.28 Aligned_cols=58 Identities=28% Similarity=0.321 Sum_probs=39.1
Q ss_pred HHHH--HHHHcCCCEEEE-cccccccc--------CCCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFN--FLYRHGINTVRI-PVGWWIAF--------DPDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~--~la~~G~N~VRI-pv~ww~~~--------~~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+-++ .||++|+|+|=| |+.-.... .+.....|+ + +..+.|+++|+.|.++||+||||+
T Consensus 59 ~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccccHHHHHHHHHHHHhccccceeee
Confidence 5555 789999999999 55210000 000000111 1 478999999999999999999997
|
| >d1jlxa2 b.42.3.1 (A:154-299) Agglutinin {Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Agglutinin family: Agglutinin domain: Agglutinin species: Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]
Probab=93.52 E-value=0.25 Score=41.09 Aligned_cols=99 Identities=9% Similarity=0.128 Sum_probs=68.4
Q ss_pred ceEEEEEecCCeEEEEecCCCce-eEEcCCCCC-CcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCC--C
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTD-VSVTRDVAS-SWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPS--T 141 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~-l~anr~~~~-~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~--~ 141 (532)
.-|.||. -||||+.++.=++-+ |-...+.++ +--+|++.-..++.+.+|+ ++||||...+.+= +.|.++-+. .
T Consensus 10 ~~V~fkg-~NgkYLry~~~~~~~~LqF~sddI~dp~v~~~v~~~~~g~V~iks~~~nKfWRRs~pNW-I~ads~D~~~s~ 87 (146)
T d1jlxa2 10 GYVTFKG-NNGKYLGVITINQLPCLQFGYDNLNDPKVAHQMFVTSNGTICIKSNYMNKFWRLSTDDW-ILVDGNDPRETN 87 (146)
T ss_dssp SSEEEEC-TTSCEEEEEEETTEEEEEEEECCTTCGGGCEEEEECTTSCEEEEETTTTEEEEECGGGB-EEEEECCHHHHC
T ss_pred eeEEEec-CCCcEEEEEEecCcceeEecccccCCccceEEEEECCCCeEEEEeccCCceeecCCCCe-EEecCCCCCCCC
Confidence 4578885 899999998766666 444555553 4457776556788899999 8999998654332 556555443 2
Q ss_pred C--ceEEEEEcCCCcEEEEe-cCCceEEe
Q 009560 142 P--ETFEIERNNDSRVHIKL-KSGTYLQA 167 (532)
Q Consensus 142 ~--e~F~~v~~~~~~v~i~a-~nG~~l~a 167 (532)
| .-|..+..+++.++|+- -|+.|+.-
T Consensus 88 ~~~TLF~p~~~dd~~i~Lrnlgn~~f~~r 116 (146)
T d1jlxa2 88 EAAALFRSDVHDFNVISLLNMQKTWFIKR 116 (146)
T ss_dssp CGGGCEEEEEEETTEEEEEETTTTEEEEE
T ss_pred CcceeEeEEeecCCeeehhhcCCcceeee
Confidence 2 34677777678899876 67777763
|
| >d2fdbm1 b.42.1.1 (M:34-180) Fibroblast growth factor 8, FGF8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 8, FGF8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.44 E-value=0.56 Score=39.63 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=77.2
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEec-CCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCce
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVS-ESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPET 144 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~-~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~ 144 (532)
-..+|-+.++|.||-....| .|-+.++.-+....+++..++ ++.|.+|+ ..+.|+|.+..|. |.+.++.+..-|.
T Consensus 19 R~~qLY~r~~g~~L~I~~dG--~V~Gt~~~~~~~~~l~i~sv~~~g~V~I~gv~s~~YLcmn~~G~-Lyg~~~~~~~dC~ 95 (147)
T d2fdbm1 19 RTYQLYSRTSGKHVQVLANK--RINAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGK-LIAKSNGKGKDCV 95 (147)
T ss_dssp EEEEEEETTTSSEEEECTTS--CEEEEECTTCGGGCEEEEEEETTTEEEEEETTTCCEEEECTTSC-EEEESCCCSGGGE
T ss_pred EEEEEEEcCCCEEEEECCCC--cEeeecCCCCCcceEEEEEcCCCCEEEEEEcccccEEEEcCCCC-EEEecccCCCCce
Confidence 35578887789999998765 677777777788888888887 46899999 7999999999995 9998988888999
Q ss_pred EEEEEcCCCcEEEEe--cCCceEEeccCce
Q 009560 145 FEIERNNDSRVHIKL--KSGTYLQATLGNQ 172 (532)
Q Consensus 145 F~~v~~~~~~v~i~a--~nG~~l~a~~~~~ 172 (532)
|.=....++...... .-+.||-.+..|.
T Consensus 96 F~E~~~en~Y~~y~S~~~~~~yval~~~G~ 125 (147)
T d2fdbm1 96 FTEIVLENNYTALQNAKYEGWYMAFTRKGR 125 (147)
T ss_dssp EEEEECTTSCEEEEESSSTTCBCCBCTTSC
T ss_pred EEEEEccCCCEEEEecCCCCeEEEECCCCc
Confidence 964433344444544 3366666555443
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=93.32 E-value=0.38 Score=46.24 Aligned_cols=52 Identities=25% Similarity=0.249 Sum_probs=35.8
Q ss_pred HHHcCCCEEEE-ccccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcCCEEEEEcC
Q 009560 234 LYRHGINTVRI-PVGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYNIKCIIDLH 287 (532)
Q Consensus 234 la~~G~N~VRI-pv~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~Gi~VILDlH 287 (532)
||++|+|+|=| ||.- ........+. ++ +..+.|+++|+.|.++||+||+|+-
T Consensus 44 i~~LGv~~i~l~Pi~~--~~~~~GY~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 44 IADLGVNGIWLMPIFK--SPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CSSCCCSEEEECCCEE--CSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HhhcCccEEEECCCCC--CCCCCCcCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 48999999998 5521 1000011111 11 4789999999999999999999974
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.23 E-value=0.038 Score=56.77 Aligned_cols=62 Identities=21% Similarity=0.306 Sum_probs=41.7
Q ss_pred HHHHHHHHcCCCEEEE-cccccccc--CCCCCCCC--------C----------cChHHHHHHHHHHHHHcCCEEEEEc-
Q 009560 229 EDFNFLYRHGINTVRI-PVGWWIAF--DPDPPAPF--------I----------GGSLEALDNALSWAEAYNIKCIIDL- 286 (532)
Q Consensus 229 ~d~~~la~~G~N~VRI-pv~ww~~~--~~~~~~~~--------~----------~~~l~~Ld~~v~~a~k~Gi~VILDl- 286 (532)
+-++.||++|+|+|=| ||.-..-. .+.....| + -+..+.++++|+.|+++||+||||+
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDvV 203 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFI 203 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEee
Confidence 4588999999999998 44211000 00000001 1 1568999999999999999999998
Q ss_pred --CCCC
Q 009560 287 --HAAP 290 (532)
Q Consensus 287 --H~~p 290 (532)
|...
T Consensus 204 ~NHts~ 209 (572)
T d1gjwa2 204 PRTAAR 209 (572)
T ss_dssp TTEEET
T ss_pred eccccc
Confidence 6543
|
| >d1jlxa2 b.42.3.1 (A:154-299) Agglutinin {Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Agglutinin family: Agglutinin domain: Agglutinin species: Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]
Probab=93.02 E-value=0.15 Score=42.46 Aligned_cols=84 Identities=11% Similarity=0.111 Sum_probs=60.8
Q ss_pred CCeEEEEecCCeEEEEeCCCc--eEEEeecCCC-CCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCCCCCCCCC
Q 009560 110 ESEFQFRTSQGQFLTCDGEGC--VVSATAKSPS-TPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYPGMPGWDD 185 (532)
Q Consensus 110 ~~~~~lr~~~~~~v~~~~~g~--~~~a~~~~~~-~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~~~~~W~~ 185 (532)
...|+||..||+|+.+...++ -|...++-++ +.-+|++..+.++.||||. .+|||.--.+.+++.||-.....=+.
T Consensus 9 k~~V~fkg~NgkYLry~~~~~~~~LqF~sddI~dp~v~~~v~~~~~g~V~iks~~~nKfWRRs~pNWI~ads~D~~~s~~ 88 (146)
T d1jlxa2 9 KGYVTFKGNNGKYLGVITINQLPCLQFGYDNLNDPKVAHQMFVTSNGTICIKSNYMNKFWRLSTDDWILVDGNDPRETNE 88 (146)
T ss_dssp CSSEEEECTTSCEEEEEEETTEEEEEEEECCTTCGGGCEEEEECTTSCEEEEETTTTEEEEECGGGBEEEEECCHHHHCC
T ss_pred ceeEEEecCCCcEEEEEEecCcceeEecccccCCccceEEEEECCCCeEEEEeccCCceeecCCCCeEEecCCCCCCCCC
Confidence 345899999999999986555 5777777766 4779999999889999999 88999975545688887654321012
Q ss_pred CCcceeee
Q 009560 186 NAATFEMA 193 (532)
Q Consensus 186 ~ps~f~~~ 193 (532)
.-++|..-
T Consensus 89 ~~TLF~p~ 96 (146)
T d1jlxa2 89 AAALFRSD 96 (146)
T ss_dssp GGGCEEEE
T ss_pred cceeEeEE
Confidence 23566643
|
| >d1bfga_ b.42.1.1 (A:) Basic FGF (FGF2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Basic FGF (FGF2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.96 E-value=0.71 Score=37.83 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=72.5
Q ss_pred EEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEEEE
Q 009560 70 QIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFEIE 148 (532)
Q Consensus 70 ~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v 148 (532)
+|-+.++|.||..-..| .|.+.++.-+..-.|++.-++.+.+.||+ ..+.|+|.+..|- |.+.. .+...+.|.-.
T Consensus 4 ~LY~r~~g~~L~I~~dG--~V~Gt~~~~~~~~~l~i~s~~~g~V~i~~~~s~~yLcmn~~G~-lyg~~-~~~~dC~F~E~ 79 (126)
T d1bfga_ 4 RLYCKNGGFFLRIHPDG--RVDGVREKSDPHIKLQLQAEERGVVSIKGVSANRYLAMKEDGR-LLASK-SVTDECFFFER 79 (126)
T ss_dssp EEEETTTTEEEEECTTS--CEEEECCTTCGGGCEEEEECSTTEEEEEETTTTEEEEECTTSC-EEEES-SCCGGGCEEEE
T ss_pred eeEEcCCCeEEEECCCC--CEeeecCCCCCceEEEEEecCCCEEEEEecccccEEEEcCCCc-EEecc-cCCCCcEEEEE
Confidence 45665668999997655 66676766667777887778888999999 8999999998885 77655 45788999765
Q ss_pred EcCCCcEEEEe--cCCceEEeccCce
Q 009560 149 RNNDSRVHIKL--KSGTYLQATLGNQ 172 (532)
Q Consensus 149 ~~~~~~v~i~a--~nG~~l~a~~~~~ 172 (532)
...++...+.. ..|.||-.+..|.
T Consensus 80 ~~en~y~~y~S~~~~~~yval~~~Gk 105 (126)
T d1bfga_ 80 LESNNYNTYRSRKYTSWYVALKRTGQ 105 (126)
T ss_dssp ECTTSCEEEEESSSTTCBCCBCTTSS
T ss_pred ECCCCcEEEEEcCCCCcEEEECcCCC
Confidence 55456666665 3467776655543
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=92.92 E-value=0.049 Score=52.80 Aligned_cols=58 Identities=17% Similarity=0.263 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccCCCC-------CCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFDPDP-------PAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~~~~-------~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.++.|+++|+|+|=| |+.- ....... ...|+ + +..+.|+++|+.|+++||+||||+
T Consensus 20 ~~~ldyl~~lGv~aIwl~Pi~~-~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~VilD~ 95 (344)
T d1ua7a2 20 KHNMKDIHDAGYTAIQTSPINQ-VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (344)
T ss_dssp HHTHHHHHHTTCSEEEECCCEE-ECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhHHHHHHcCCCEEEeCCCee-CCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhcccceeEeecc
Confidence 46678999999999998 3321 1000000 00111 1 478999999999999999999997
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=92.90 E-value=0.082 Score=51.90 Aligned_cols=59 Identities=20% Similarity=0.264 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEE-ccccccccC----CCCCCCCC--------c--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRI-PVGWWIAFD----PDPPAPFI--------G--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRI-pv~ww~~~~----~~~~~~~~--------~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+-++.||++|+|+|=| ||.-..... ......|. + +..+.|+++|+.|.++||+||||+
T Consensus 55 ~~kLdyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 55 RQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccCCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 45678999999999998 331100000 00001121 1 579999999999999999999997
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=92.51 E-value=1.3 Score=36.93 Aligned_cols=111 Identities=11% Similarity=0.145 Sum_probs=73.8
Q ss_pred CCcccccceEEEEEec-CCeEEEEecCCCceeEEcCCCCCCcceEEEEE-ecCCeEEEEe-cCCeEEEEe-CCCceEEEe
Q 009560 60 NGDMLDGTQVQIKSVT-LEKYVCAESGGGTDVSVTRDVASSWETFTLWR-VSESEFQFRT-SQGQFLTCD-GEGCVVSAT 135 (532)
Q Consensus 60 ~~~~~~g~~v~~~s~~-~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~-~~~~~~~lr~-~~~~~v~~~-~~g~~~~a~ 135 (532)
..|+++|..-.++|.. .+|.+-. ..++.|..=...-+.-.+|++.. .+++.+.||+ .+++.+.+. ..|+.++.-
T Consensus 3 ~~~~~~~~~y~i~~~~Ns~kvlD~--~s~t~Vq~w~~~g~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~~~g~~v~~~ 80 (145)
T d1qxma1 3 ANDLRNNEVFFISPSNNTNKVLDK--ISQSEVKLWNKLSGANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSVK 80 (145)
T ss_dssp TTSCCTTCEEEEEETTCTTEEEEE--CSSSCEEEEECCCCGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEEE
T ss_pred CcccCcCCEEEEEECCCCCeEEEe--cCCCEEEEEcCCCChhheEEEEEcCCCCEEEEEECCCCCEEEeccCCCceEEEE
Confidence 4678888888888855 4555543 33355555333334456677654 5568899998 677777654 334467777
Q ss_pred ecCCCCCceEEEEEcC-CCcEEEEe--cCCceEEeccCce
Q 009560 136 AKSPSTPETFEIERNN-DSRVHIKL--KSGTYLQATLGNQ 172 (532)
Q Consensus 136 ~~~~~~~e~F~~v~~~-~~~v~i~a--~nG~~l~a~~~~~ 172 (532)
...-++.+.|.|+... ++..+|+- +.|+-|.+..+..
T Consensus 81 ~~~g~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~gg~~ 120 (145)
T d1qxma1 81 TDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNIDDT 120 (145)
T ss_dssp CCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECTTSC
T ss_pred cCCCCchheEEEeecCCCCEEEEEEccCCCEEEEecCCce
Confidence 7777889999998754 66777875 4588888765443
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=92.45 E-value=2 Score=41.60 Aligned_cols=209 Identities=11% Similarity=0.087 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHHcCCEEEEEcCCC-CCCCC-CCCCCCCCCCCCCCCChhhHHHH---HHHHHHHHHHhCCCC----cE
Q 009560 264 SLEALDNALSWAEAYNIKCIIDLHAA-PGSQN-GMEHSASRDGTTDWPASDYISQT---LDVIDFLASRYAKHP----AL 334 (532)
Q Consensus 264 ~l~~Ld~~v~~a~k~Gi~VILDlH~~-pGsqn-~~~~sg~~~g~~~W~~~~~~~~~---~~~w~~la~ry~~~p----~v 334 (532)
.++.+.+.+.++.++|--|.+..|-. |.... .++.+..... ..-......+.+ ++-+..++...++.. .|
T Consensus 86 ~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~-~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~~VPV 164 (366)
T d2bvya2 86 NIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLR-AVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPI 164 (366)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHH-HHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCE
T ss_pred hHHHHHHHHHHhhccCCEEEEEEecCCCCCCCcccCCchhHHH-HhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCccE
Confidence 56667777777788899999999954 21111 1111100000 000001223334 444455566666532 24
Q ss_pred EEEEeccCCCCC-------CCCcccHHHHHHHHHHHHHhh-CCCcEEEEeCCCC--CCCchhhhhccCCCC-cEEEEeee
Q 009560 335 LGIELLNEPSAA-------TVPLDILVPYYKQGYQIVRKY-SPTAYVIVCQRIG--NADPLELYQANIGLH-NIVVDLHY 403 (532)
Q Consensus 335 ~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR~~-~~~~~Viv~~~~~--~~~~~~~~~~~~~~~-nvv~s~H~ 403 (532)
+ |-.+.|..+. ..+++.++++++.+++.+|+. +-+.+|.+=+.-. ..+...+...-++++ =.|+.+-.
T Consensus 165 l-~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG~D~ 243 (366)
T d2bvya2 165 V-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 243 (366)
T ss_dssp E-EECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred E-EeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCCCCCeEEEEEEec
Confidence 4 8899998763 136688999999999999975 5566666532111 112233444334444 46888888
Q ss_pred cccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcccCCCCCCHHHHHHHHHHHHHHHHhC----CCcE
Q 009560 404 YNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNEWNVTSGTQKDYQDFGSAQLEVYNAA----SFGW 479 (532)
Q Consensus 404 Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~~~~~~a~~~~~~~~~~~ql~~~~~~----~~Gw 479 (532)
|..... ......+... .+.+..+++.+++|+.++|+|..-..... ..+-..|.+..+....+. .+.|
T Consensus 244 Y~~~~~-------~~~~~~~~~~-l~~~~~~a~~~~Kp~altE~G~~~~~~~~-~~~~~~W~~~~l~~i~~~~~~~~~~y 314 (366)
T d2bvya2 244 YDSTGS-------DAFLAGLVAD-LRMIAEIADEKGKVSAFTEFGVSGGVGTN-GSSPAQWFTKVLAAIKADPVASRNAY 314 (366)
T ss_dssp EESSCC-------HHHHHHHHHH-HHHHHHHHHHHTCEECBCEEEETTCSSTT-SCCCTTHHHHHHHHHHHSTTTTCCSE
T ss_pred cCCCCC-------cchHHHHHHH-HHHHHHHHHhcCCcEEEeceeccCCcccc-CCCcchHHHHHHHHHHhCccccceeE
Confidence 865321 1111112111 23344455566789999999975321110 001123555555555542 3455
Q ss_pred E-EEc
Q 009560 480 A-YWT 483 (532)
Q Consensus 480 ~-yW~ 483 (532)
+ .|.
T Consensus 315 ~~~W~ 319 (366)
T d2bvya2 315 METWA 319 (366)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 4 564
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=92.41 E-value=1.3 Score=36.81 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=69.9
Q ss_pred eEEEEEecCCeEEEEecCC---CceeEE---cCCCCCCcceEEEEEec--CCeEEEEe-cCCeEEEEeC----CCceEEE
Q 009560 68 QVQIKSVTLEKYVCAESGG---GTDVSV---TRDVASSWETFTLWRVS--ESEFQFRT-SQGQFLTCDG----EGCVVSA 134 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg---~~~l~a---nr~~~~~wE~f~~~~~~--~~~~~lr~-~~~~~v~~~~----~g~~~~a 134 (532)
...|+++..|++|-...+. |++|+. |-+......+|.+-.++ ++.|.+|. ..++++.+.+ .|.+|+.
T Consensus 6 ~Y~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v~~ 85 (154)
T d2ihoa1 6 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNG 85 (154)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSCCTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEEEE
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCCCcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEEEE
Confidence 4479999999999876543 356765 44444456778766665 46799998 7799998763 2334543
Q ss_pred ---eecCCCCCceEEEEEcCCC-cEEEEe-cCCceEEecc
Q 009560 135 ---TAKSPSTPETFEIERNNDS-RVHIKL-KSGTYLQATL 169 (532)
Q Consensus 135 ---~~~~~~~~e~F~~v~~~~~-~v~i~a-~nG~~l~a~~ 169 (532)
...+.++++.|.|+..+++ ..+|+. ..|+.|.+..
T Consensus 86 ~~~~~~~~~~~Q~W~~~~~~~g~~y~i~n~~sg~~Ldv~~ 125 (154)
T d2ihoa1 86 WQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVN 125 (154)
T ss_dssp ECCCTTCCCGGGCEEEEECTTSSSEEEEETTTCCEEEEGG
T ss_pred EeecccCCCcccEEEEccCCCcceEEEEEcCCCcEEEcCC
Confidence 2345578899999998744 466766 6688888753
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=91.81 E-value=0.043 Score=53.51 Aligned_cols=57 Identities=18% Similarity=0.323 Sum_probs=38.8
Q ss_pred HHHH-HHHHcCCCEEEEcccc----------ccccCCCCCCCCCc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 229 EDFN-FLYRHGINTVRIPVGW----------WIAFDPDPPAPFIG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 229 ~d~~-~la~~G~N~VRIpv~w----------w~~~~~~~~~~~~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
+.+. .|+++|+++|=|+=.. |...++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY-~id~~~Gt~~df~~LV~~aH~~GI~VilDv 95 (378)
T d1jaea2 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (378)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccc-eeCCCCCCHHHHHHHHHHHHhcCceeeeee
Confidence 4444 5999999999884321 111222111 1122 479999999999999999999995
|
| >d1nuna_ b.42.1.1 (A:) Fibroblast growth factor-10, FGF10 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor-10, FGF10 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.61 E-value=0.34 Score=40.69 Aligned_cols=64 Identities=23% Similarity=0.208 Sum_probs=55.0
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.+|-+.+|.|+....+|. |.++++.-.+...|++.-.+.+.|+|+. ..|.|||.+..|.|.+.-
T Consensus 12 ~~Ly~r~~~~L~I~~dG~-V~Gt~~~~~~~~~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~Ly~~~ 76 (139)
T d1nuna_ 12 RKLFSFTKYFLKIEKNGK-VSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGKLYGSK 76 (139)
T ss_dssp EEEEETTSCEEEECTTSC-EEEECCSCCTTSCEEEEEEETTEEEEEETTTTEEEEECTTSBEEEES
T ss_pred EEEEecCCeEEEECCCCe-EEeEcCCCCcceeEEEEeeccCEEEEEEcccceEEEECCCCcEecCC
Confidence 566677899999988885 9999988888999998888778999998 889999999999988754
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=90.54 E-value=0.17 Score=51.07 Aligned_cols=23 Identities=9% Similarity=0.320 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHH-HHcCCEEEEEc
Q 009560 264 SLEALDNALSWA-EAYNIKCIIDL 286 (532)
Q Consensus 264 ~l~~Ld~~v~~a-~k~Gi~VILDl 286 (532)
.++.++++|+.| +++||+||||+
T Consensus 178 ~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 178 RIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhccCceeeecC
Confidence 478899999876 78999999996
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=89.65 E-value=1.7 Score=41.49 Aligned_cols=144 Identities=15% Similarity=0.161 Sum_probs=89.3
Q ss_pred HHHHHHHHHcCCCEEEEcc----ccccccCCC-C----------C----CCCCcC---hHHHHHHHHHHHHHcCCEEEEE
Q 009560 228 IEDFNFLYRHGINTVRIPV----GWWIAFDPD-P----------P----APFIGG---SLEALDNALSWAEAYNIKCIID 285 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv----~ww~~~~~~-~----------~----~~~~~~---~l~~Ld~~v~~a~k~Gi~VILD 285 (532)
++.++.|+..++|.+-+++ +| .+.-+. | . .++... .-+.++++++.|+++||.||..
T Consensus 21 k~~id~ma~~K~N~lhlHltDdq~~-~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt~~e~~~lv~yA~~rgI~viPe 99 (344)
T d1yhta1 21 KSFIDTISLSGGNFLHLHFSDHENY-AIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPE 99 (344)
T ss_dssp HHHHHHHHHTTCCEEEEECBSSSCB-CBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEeecCCCc-eecccCCchhhhhccccCCCCCCCCCCCCcccCHHHHHHHHHHHHHcCCEEEec
Confidence 6778889999999997765 22 111110 0 0 011111 5788999999999999999988
Q ss_pred cCCCCCCCCCCC---------------CCCCCCCCCCCCChhhHHHHHHHHHHHHHHhCCCCcE--EEEEeccCCCCCCC
Q 009560 286 LHAAPGSQNGME---------------HSASRDGTTDWPASDYISQTLDVIDFLASRYAKHPAL--LGIELLNEPSAATV 348 (532)
Q Consensus 286 lH~~pGsqn~~~---------------~sg~~~g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v--~g~EL~NEP~~~~~ 348 (532)
+- .||....+- ......+.....+++..+-..++++.+++-|.+.... +| .-|......
T Consensus 100 iD-~PGH~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~F~~~~~~~HiG---gDE~~~~~~ 175 (344)
T d1yhta1 100 LD-SPNHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIG---GDEFGYSVE 175 (344)
T ss_dssp EE-ESSSCHHHHHHHHHHHCHHHHHHHBCSSCTTSBCTTCHHHHHHHHHHHHHHHHHHGGGCSEEEEE---CCSCCTTSC
T ss_pred cc-hhhHHHHHHHhchhhcCCCCccCCCCCCCCCcccCCCchhHHHHHHHHHHHHHhcCCccceEEee---chhhhcccc
Confidence 75 355321000 0000112233446777888889999999999653222 33 356544444
Q ss_pred CcccHHHHHHHHHHHHHhhCCCcEEEEeC
Q 009560 349 PLDILVPYYKQGYQIVRKYSPTAYVIVCQ 377 (532)
Q Consensus 349 ~~~~l~~~~~~~~~aIR~~~~~~~Viv~~ 377 (532)
....+..++.++.+.+++.+. .+++=++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~Gk-~~~~W~d 203 (344)
T d1yhta1 176 SNHEFITYANKLSYFLEKKGL-KTRMWND 203 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC-EEEEEST
T ss_pred cchHHHHHHHHHHHHHHHCCC-EEEEEhh
Confidence 556688899999999999875 4444344
|
| >d1rg8a_ b.42.1.1 (A:) Acidic FGF (FGF1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Acidic FGF (FGF1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.44 E-value=2.8 Score=34.83 Aligned_cols=102 Identities=15% Similarity=0.166 Sum_probs=72.9
Q ss_pred ceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceE
Q 009560 67 TQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETF 145 (532)
Q Consensus 67 ~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F 145 (532)
...+|=+.++|.||..-..| .|.+.++.-+..-.|++.-++.+.|.+|+ ..+.|+|.+..|- |.+.. .+..-+.|
T Consensus 14 r~~~LY~r~~g~~L~I~~dG--~V~Gt~~~~~~~~~l~i~s~~~g~V~Irgv~s~~YLcmn~~G~-Lygs~-~~~~dC~F 89 (141)
T d1rg8a_ 14 KPKLLYCSNGGHFLRILPDG--TVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGL-LYGSQ-TPNEECLF 89 (141)
T ss_dssp SCEEEEETTTTEEEEECTTS--CEEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSC-EEEES-SCCGGGCE
T ss_pred eeEEEEECCCCcEEEECCCC--eEecccCCCCCceEEEEEEccCCEEEEEEcccccEEEECCCCC-EEecC-CCCCCceE
Confidence 55667776678999888654 77777777777777888888889999999 7999999999985 87755 46788889
Q ss_pred EEEEcCCCcEEEEe----cCCceEEeccCce
Q 009560 146 EIERNNDSRVHIKL----KSGTYLQATLGNQ 172 (532)
Q Consensus 146 ~~v~~~~~~v~i~a----~nG~~l~a~~~~~ 172 (532)
.=....++-..... ..+.||..+..|.
T Consensus 90 ~E~~~en~YntY~S~~~~~~~~yval~k~G~ 120 (141)
T d1rg8a_ 90 LERLEENHYNTYISKKHAEKNWFVGLKKNGS 120 (141)
T ss_dssp EEEEETTTEEEEEESTTGGGTCBCCBCTTSC
T ss_pred EEEEccCCeEEEEEeccCCCceEEEECCCCC
Confidence 64444334333333 1245666655443
|
| >d1qqka_ b.42.1.1 (A:) Keratinocyte growth factor, FGF7 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Keratinocyte growth factor, FGF7 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.43 E-value=0.72 Score=38.17 Aligned_cols=64 Identities=22% Similarity=0.175 Sum_probs=53.7
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
..|-+.+|.|+....+|. |.++.+.-.+...|++.--+.+.|+|++ ..+.|||.+..|.|.+..
T Consensus 5 ~~Ly~r~~~~L~I~~dG~-V~Gt~~~~~~~s~l~~~sv~~~~V~I~gv~s~~YLcmn~~G~Ly~~~ 69 (132)
T d1qqka_ 5 RRLFCRTQWYLRIDKRGK-VKGTQEMRNSYNIMEIRTVAVGIVAIKGVESEYYLAMNKEGKLYAKK 69 (132)
T ss_dssp EEEEETTSCEEEECTTSC-EEEESCTTCSTTEEEEEECSSSEEEEEETTTCCCCEECTTCCEECCS
T ss_pred EEEEecCCcEEEECCCCc-EeeEcCCCCcceeeEEEEcccCEEEEEEcccCCEEeECCCCcEeccc
Confidence 345566888999988885 9999888788899999988778999998 789999999999988754
|
| >d1bfga_ b.42.1.1 (A:) Basic FGF (FGF2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Basic FGF (FGF2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.31 E-value=0.67 Score=37.97 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=50.3
Q ss_pred CCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCCC
Q 009560 119 QGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDYP 178 (532)
Q Consensus 119 ~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~~ 178 (532)
+|.|+....+|. |.++++.-.....|++...+.+.|+|+. ..+.||+.+..|.|.+.-.
T Consensus 10 ~g~~L~I~~dG~-V~Gt~~~~~~~~~l~i~s~~~g~V~i~~~~s~~yLcmn~~G~lyg~~~ 69 (126)
T d1bfga_ 10 GGFFLRIHPDGR-VDGVREKSDPHIKLQLQAEERGVVSIKGVSANRYLAMKEDGRLLASKS 69 (126)
T ss_dssp TTEEEEECTTSC-EEEECCTTCGGGCEEEEECSTTEEEEEETTTTEEEEECTTSCEEEESS
T ss_pred CCeEEEECCCCC-EeeecCCCCCceEEEEEecCCCEEEEEecccccEEEEcCCCcEEeccc
Confidence 388999988885 9999888778889999988778899998 8899999999999876543
|
| >d1rg8a_ b.42.1.1 (A:) Acidic FGF (FGF1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Acidic FGF (FGF1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.86 E-value=0.55 Score=39.42 Aligned_cols=63 Identities=22% Similarity=0.301 Sum_probs=52.2
Q ss_pred EEEecC-CeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 114 QFRTSQ-GQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 114 ~lr~~~-~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.|=+.+ |.|+....+|. |.++++.-.....|+++-.+.+.|+|+. ..+.|||.+..|.|.+.-
T Consensus 17 ~LY~r~~g~~L~I~~dG~-V~Gt~~~~~~~~~l~i~s~~~g~V~Irgv~s~~YLcmn~~G~Lygs~ 81 (141)
T d1rg8a_ 17 LLYCSNGGHFLRILPDGT-VDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTDGLLYGSQ 81 (141)
T ss_dssp EEEETTTTEEEEECTTSC-EEEECCTTCTTCCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEES
T ss_pred EEEECCCCcEEEECCCCe-EecccCCCCCceEEEEEEccCCEEEEEEcccccEEEECCCCCEEecC
Confidence 454534 78999988885 9999988778888998887777999999 789999999999988754
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=88.29 E-value=1.3 Score=36.31 Aligned_cols=83 Identities=11% Similarity=0.038 Sum_probs=56.2
Q ss_pred ccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe--cCCeEEEEeCCCceEEEeecCCC-C
Q 009560 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT--SQGQFLTCDGEGCVVSATAKSPS-T 141 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~--~~~~~v~~~~~g~~~~a~~~~~~-~ 141 (532)
|| ...|++...|||+..++..|+.++.--+.-..-.+|.|... ++.+.|+. ..++++-.++..+..+++-...+ .
T Consensus 44 ~g-~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~~~~qqW~l~~~-gg~~~i~n~~~s~~~L~v~~~sG~~~~~~~~~~~~ 121 (131)
T d1upsa2 44 DG-YTLLKNNETGEYLNIENQTGYIEHGKVPKTWWSAQWSEVPV-DGYTRFVNRWKPNMSIHTESYEGVLQYGNVPNTYW 121 (131)
T ss_dssp TT-EEEEEETTTCCEEECTTCCSBCEEECCCTTCGGGCEEEEEE-TTEEEEEESSSTTCEEECTTCCSBCEEECCCTTCG
T ss_pred CC-EEEEEECCCCcEEEccCCCCceEEEccCCCChhHeEEEEec-CCcEEEEEeccCCeEEEEecCCcceeeeeccCCCc
Confidence 55 58999999999999998877766655555555577787665 46677776 35889888764443445443332 3
Q ss_pred CceEEEEE
Q 009560 142 PETFEIER 149 (532)
Q Consensus 142 ~e~F~~v~ 149 (532)
...++|++
T Consensus 122 ~qqW~l~p 129 (131)
T d1upsa2 122 TSQWQLIP 129 (131)
T ss_dssp GGCEEEEE
T ss_pred CccEEEEE
Confidence 45666664
|
| >d1nuna_ b.42.1.1 (A:) Fibroblast growth factor-10, FGF10 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor-10, FGF10 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.17 E-value=5.2 Score=32.94 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=63.4
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFE 146 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~ 146 (532)
.++|-+ .+|.|+-....| .|...++.-+.-..|++.-++.+.+.+|+ ..+.|+|.+..|. |.+.. .+..-+.|.
T Consensus 11 ~~~Ly~-r~~~~L~I~~dG--~V~Gt~~~~~~~~~l~~~sv~~g~V~I~gv~s~~YLcmn~~G~-Ly~~~-~~~~dC~F~ 85 (139)
T d1nuna_ 11 WRKLFS-FTKYFLKIEKNG--KVSGTKKENCPYSILEITSVEIGVVAVKAINSNYYLAMNKKGK-LYGSK-EFNNDCKLK 85 (139)
T ss_dssp EEEEEE-TTSCEEEECTTS--CEEEECCSCCTTSCEEEEEEETTEEEEEETTTTEEEEECTTSB-EEEES-SCCTTSEEE
T ss_pred eEEEEe-cCCeEEEECCCC--eEEeEcCCCCcceeEEEEeeccCEEEEEEcccceEEEECCCCc-EecCC-cCCCCCeEE
Confidence 378887 478899987665 66777777777788888888889999999 8899999999885 87765 457888996
Q ss_pred EEEcCCCc
Q 009560 147 IERNNDSR 154 (532)
Q Consensus 147 ~v~~~~~~ 154 (532)
=....++-
T Consensus 86 E~~~en~Y 93 (139)
T d1nuna_ 86 ERIEENGY 93 (139)
T ss_dssp EEECTTSC
T ss_pred EEECCCCc
Confidence 54443344
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=88.15 E-value=8 Score=37.27 Aligned_cols=174 Identities=11% Similarity=0.102 Sum_probs=92.6
Q ss_pred HHHHHHHHHHcCCEEEEEcCCC-CCCC--CCCCCCCCC-CCCC---CCC-ChhhHHHHHHHHHHHH---HHhCCCC----
Q 009560 268 LDNALSWAEAYNIKCIIDLHAA-PGSQ--NGMEHSASR-DGTT---DWP-ASDYISQTLDVIDFLA---SRYAKHP---- 332 (532)
Q Consensus 268 Ld~~v~~a~k~Gi~VILDlH~~-pGsq--n~~~~sg~~-~g~~---~W~-~~~~~~~~~~~w~~la---~ry~~~p---- 332 (532)
.+.+++++ ++|--|.+..|-. |-.. .++...+.. +... .-. ..+.-+.+.+.++.+| ++.++..
T Consensus 84 ~~~~~~~~-~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~~v 162 (381)
T d1odza_ 84 VAQVKKAY-ARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGRLI 162 (381)
T ss_dssp HHHHHHHH-HTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSCBC
T ss_pred HHHHHHHH-HCCCeEEEEEeeCCCCCCCCCccccCCcccchhhhHhhcCCCCchhHHHHHHHHHHHHHHHHhhhccCCCc
Confidence 44455554 5688899999964 4221 111001100 0000 000 1133344544444444 4565532
Q ss_pred cEEEEEeccCCCCC-------CCCcccHHHHHHHHHHHHHhh-CCCcEEEEeCCCC--CCCchhhhhccCCCC-cEEEEe
Q 009560 333 ALLGIELLNEPSAA-------TVPLDILVPYYKQGYQIVRKY-SPTAYVIVCQRIG--NADPLELYQANIGLH-NIVVDL 401 (532)
Q Consensus 333 ~v~g~EL~NEP~~~-------~~~~~~l~~~~~~~~~aIR~~-~~~~~Viv~~~~~--~~~~~~~~~~~~~~~-nvv~s~ 401 (532)
.|+ |-.+.|-.+. ..+++.++++++.+++.+|+. +-+.+|.+=.... ......+...-++++ =.|+.+
T Consensus 163 PVl-~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG~ 241 (381)
T d1odza_ 163 PVI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLGF 241 (381)
T ss_dssp CEE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEECC
T ss_pred cEE-EeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCccccccccCCCCCeEEEEEe
Confidence 344 8899998763 234678999999999999986 4566666532211 111233444334444 468888
Q ss_pred eecccCCCccccCChhhhHHHHHHHHHHHHHHHHhcCCCcEEEeccCcc
Q 009560 402 HYYNLFDTFFVNMSTVDNILFIYKSREAQLQALNNANGPLVFIGEWVNE 450 (532)
Q Consensus 402 H~Y~~f~~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~g~pv~vGEwG~~ 450 (532)
-.|.+.... ..+ ...+.. ....+..+++.+++|+.++|+|..
T Consensus 242 D~Y~~~~~~-----~~~-~~~~~~-~l~~~~~~A~~~gKp~altE~G~~ 283 (381)
T d1odza_ 242 DTYGPVADN-----ADW-FRNVVA-NAALVARMAEARGKIPVISGIGIR 283 (381)
T ss_dssp EEEECSSSC-----HHH-HHHHHH-HHHHHHHHHHHHTCEECBCEEEEC
T ss_pred eccCCCCCc-----hhH-HHHHHH-HHHHHHHHHHhcCCceeeeecccc
Confidence 888753221 111 122221 223445566677899999999964
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=88.09 E-value=4.5 Score=38.53 Aligned_cols=133 Identities=19% Similarity=0.253 Sum_probs=81.2
Q ss_pred HHHHHHHHHcCCCEEEEccc----cccccCCC---------------CCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC
Q 009560 228 IEDFNFLYRHGINTVRIPVG----WWIAFDPD---------------PPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~----ww~~~~~~---------------~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~ 288 (532)
++.|+.|+...+|.+-+.+. |..-.+.- +.+.| ..+.+.+++++|+++||.||..+-
T Consensus 21 ~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~y---T~~di~~iv~ya~~rgI~viPEid- 96 (356)
T d1jaka1 21 KRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYY---TKAEYKEIVRYAASRHLEVVPEID- 96 (356)
T ss_dssp HHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCB---CHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred HHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCcc---CHHHHHHHHHHHHHcCCeEeecCC-
Confidence 56778889999999988773 21111110 11122 588999999999999999999875
Q ss_pred CCCCCCCC------------C---CCCCCC--CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcc
Q 009560 289 APGSQNGM------------E---HSASRD--GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAATVPLD 351 (532)
Q Consensus 289 ~pGsqn~~------------~---~sg~~~--g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~~~~~~ 351 (532)
.||....+ . ..+... +...-.+++..+-..++++.+++-|.+.--.+| .-|... ...+
T Consensus 97 ~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~~~~HiG---gDE~~~--~~~~ 171 (356)
T d1jaka1 97 MPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPGRYLHIG---GDEAHS--TPKA 171 (356)
T ss_dssp CSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCSSEEECC---CCCCTT--SCHH
T ss_pred CcchhHHHHHhCccccccCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHhccccEEEec---cccccc--chHH
Confidence 35532110 0 000000 011112456677777888888887764211122 233322 2456
Q ss_pred cHHHHHHHHHHHHHhhCC
Q 009560 352 ILVPYYKQGYQIVRKYSP 369 (532)
Q Consensus 352 ~l~~~~~~~~~aIR~~~~ 369 (532)
.+..|.+++.+.+++.+.
T Consensus 172 ~~~~f~~~~~~~v~~~gk 189 (356)
T d1jaka1 172 DFVAFMKRVQPIVAKYGK 189 (356)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 788999999999999875
|
| >d1q1ua_ b.42.1.1 (A:) Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.63 E-value=0.81 Score=38.18 Aligned_cols=64 Identities=22% Similarity=0.209 Sum_probs=53.6
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.+|-+.+|.|+....+|. |.++++.-.+...|++.--+.+.|+||. ..|.||+.+..|.|.+.-
T Consensus 8 ~rLycr~g~~L~I~~dG~-V~Gt~~~~s~~s~le~~sv~~g~V~Irgv~s~~YLcmn~~G~ly~s~ 72 (138)
T d1q1ua_ 8 TRLFSQQGYFLQMHPDGT-IDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSD 72 (138)
T ss_dssp EEEEETTTEEEEECTTSC-EEEESCTTSGGGCEEEEEEETTEEEEEETTTCCEEEECTTSCEEEES
T ss_pred EEEEcCCCcEEEEcCCCc-EecccCCCCCCceEEEEeccCCEEEEEEcccccEEEECCCCCEecCC
Confidence 466677899999987785 9999888777888888876678999998 889999999999987753
|
| >d1jlxa1 b.42.3.1 (A:1-153) Agglutinin {Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Agglutinin family: Agglutinin domain: Agglutinin species: Love-lies-bleeding (Amaranthus caudatus) [TaxId: 3567]
Probab=87.60 E-value=2.3 Score=35.41 Aligned_cols=83 Identities=20% Similarity=0.207 Sum_probs=53.2
Q ss_pred eEEEEecCC-eEEE--EeCCCc--eEEEeecCCC-CCceEEEEEcC--CCcEEEEe-cCCceEEeccC--ceEEeCCCCC
Q 009560 112 EFQFRTSQG-QFLT--CDGEGC--VVSATAKSPS-TPETFEIERNN--DSRVHIKL-KSGTYLQATLG--NQLTSDYPGM 180 (532)
Q Consensus 112 ~~~lr~~~~-~~v~--~~~~g~--~~~a~~~~~~-~~e~F~~v~~~--~~~v~i~a-~nG~~l~a~~~--~~v~ad~~~~ 180 (532)
-++||+.|+ ||+. +++... -|...++-++ +.-.|++.... ++.||||. .+|||.-.-+. ..+.|+....
T Consensus 6 ~v~FKs~n~~kYLry~ae~~e~~~~lqF~~ddI~dP~v~~~ve~~~~~dg~Vhik~~~~nKfWrR~spn~~wI~a~aD~~ 85 (153)
T d1jlxa1 6 IMCLKSNNHQKYLRYQSDNIQQYGLLQFSADKILDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVRWSPNHYWITASANEP 85 (153)
T ss_dssp EEEEEETTTTEEEEECCSSSTTTTBEEEEESSTTCTTCCEEEEECSSSTTCEEEEETTTCCEEEESSTTCCBEEEEESSC
T ss_pred EEEEeccCCCeeEEEEecccccccceEecccccCCcceeEEEEeccCCCceEEEEeccCCceeeeCCCCceEEEecCCCC
Confidence 489999654 9998 443332 3777777666 57889998843 78999999 88999965343 3556554332
Q ss_pred CCCCCC-C-cceeeec
Q 009560 181 PGWDDN-A-ATFEMAI 194 (532)
Q Consensus 181 ~~W~~~-p-s~f~~~~ 194 (532)
..=..+ + ++|+.-.
T Consensus 86 ded~S~~scTLF~Pv~ 101 (153)
T d1jlxa1 86 DENKSNWACTLFKPLY 101 (153)
T ss_dssp CCCTTSTTCCCEEEEE
T ss_pred ccccCCCcceEEEEEE
Confidence 221122 2 6776433
|
| >d1ihka_ b.42.1.1 (A:) Fibroblast growth factor 9, FGF9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 9, FGF9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.55 E-value=0.83 Score=38.97 Aligned_cols=63 Identities=24% Similarity=0.176 Sum_probs=53.2
Q ss_pred EEEEecCCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeC
Q 009560 113 FQFRTSQGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSD 176 (532)
Q Consensus 113 ~~lr~~~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad 176 (532)
.+|-+.+|.|+....+|. |.++++.-.+...|++.--+.+.|+|+. ..|.|||.+..|.|.+.
T Consensus 13 ~qLy~r~g~~L~I~~dG~-V~Gt~~~~s~~s~lei~sv~~g~V~Irgv~s~~YLcmn~~G~Lygs 76 (157)
T d1ihka_ 13 RQLYCRTGFHLEIFPNGT-IQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGS 76 (157)
T ss_dssp EEEEETTSCEEEECTTSC-EEEESSTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTCCEEEE
T ss_pred EEEEecCCcEEEECCCCe-EEeeccCCCCcceEEEEeccCCEEEEEEcccccEEEECCCCCEEec
Confidence 466667888999987885 9999888788888988877678999988 88999999999998875
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=87.44 E-value=0.46 Score=49.91 Aligned_cols=57 Identities=11% Similarity=0.163 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCC--------Cc--ChHHHHHHHHHHHHHcCCEEEEEc
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPF--------IG--GSLEALDNALSWAEAYNIKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~--------~~--~~l~~Ld~~v~~a~k~Gi~VILDl 286 (532)
.+.+..|+++|+++|=|+=-+.. ...+ ..-| ++ +..+.++++|+.|+++||+||+|+
T Consensus 20 ~~~LpYL~~LGVs~IyLsPi~~a-~~gS-~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDi 86 (653)
T d1iv8a2 20 IDNLWYFKDLGVSHLYLSPVLMA-SPGS-NHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDI 86 (653)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-CTTC-SSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECccCCC-CCCC-CCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688999999999988421111 1111 0012 12 579999999999999999999996
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=85.63 E-value=3.2 Score=34.36 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=61.4
Q ss_pred ccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEE-ecCCeEEEEe-cC-CeEEEEeCCCceEEEeecCCCC
Q 009560 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWR-VSESEFQFRT-SQ-GQFLTCDGEGCVVSATAKSPST 141 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~-~~~~~~~lr~-~~-~~~v~~~~~g~~~~a~~~~~~~ 141 (532)
++...+|+++.+++.+-+....|+.++.-...-++...|.+.. .+++.+.||. .+ ++.+-+.+ |+.|+.-...-++
T Consensus 52 ~~g~Y~I~~~~s~~~l~~~~~~g~~v~~~~~~g~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g-g~~v~~~~~~g~~ 130 (145)
T d1qxma1 52 NKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTNGDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI-DDTLMVSTQTSSS 130 (145)
T ss_dssp TTTEEEEEESSSSCCEEEECTTSSCEEEECCCCCGGGCEEEEECTTTCCEEEEESSCTTEEEEECT-TSCEEEEECCSCG
T ss_pred CCCEEEEEECCCCCEEEeccCCCceEEEEcCCCCchheEEEeecCCCCEEEEEEccCCCEEEEecC-CceEEEeCCCCCc
Confidence 3467889999999988776666677787777778889898765 5678899997 54 66665544 3356666666678
Q ss_pred CceEEEEE
Q 009560 142 PETFEIER 149 (532)
Q Consensus 142 ~e~F~~v~ 149 (532)
.++|++..
T Consensus 131 nQ~w~~~~ 138 (145)
T d1qxma1 131 NQFFKFSN 138 (145)
T ss_dssp GGCEEEEE
T ss_pred ccEEEEec
Confidence 88888764
|
| >d2fdbm1 b.42.1.1 (M:34-180) Fibroblast growth factor 8, FGF8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 8, FGF8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.24 E-value=1.4 Score=37.09 Aligned_cols=62 Identities=18% Similarity=0.317 Sum_probs=51.7
Q ss_pred EEEEec-CCeEEEEeCCCceEEEeecCCCCCceEEEEEcC-CCcEEEEe-cCCceEEeccCceEEe
Q 009560 113 FQFRTS-QGQFLTCDGEGCVVSATAKSPSTPETFEIERNN-DSRVHIKL-KSGTYLQATLGNQLTS 175 (532)
Q Consensus 113 ~~lr~~-~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~-~~~v~i~a-~nG~~l~a~~~~~v~a 175 (532)
.+|=+. +|.|+....+|. |.++++.-.+...++|+.-+ ++.|+|+. ..|.|||.+..|.|.+
T Consensus 21 ~qLY~r~~g~~L~I~~dG~-V~Gt~~~~~~~~~l~i~sv~~~g~V~I~gv~s~~YLcmn~~G~Lyg 85 (147)
T d2fdbm1 21 YQLYSRTSGKHVQVLANKR-INAMAEDGDPFAKLIVETDTFGSRVRVRGAETGLYICMNKKGKLIA 85 (147)
T ss_dssp EEEEETTTSSEEEECTTSC-EEEEECTTCGGGCEEEEEEETTTEEEEEETTTCCEEEECTTSCEEE
T ss_pred EEEEEcCCCEEEEECCCCc-EeeecCCCCCcceEEEEEcCCCCEEEEEEcccccEEEEcCCCCEEE
Confidence 455564 589999998885 99999887788889988875 56899998 8999999999998876
|
| >d1sr4a_ b.42.2.1 (A:) Cytolethal distending toxin subunit A {Haemophilus ducreyi [TaxId: 730]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Cytolethal distending toxin subunit A species: Haemophilus ducreyi [TaxId: 730]
Probab=82.75 E-value=3.5 Score=35.04 Aligned_cols=70 Identities=17% Similarity=0.220 Sum_probs=50.0
Q ss_pred CcceEEEEEe-cCCeEEEEe-cCCeEEEEeCCCceEEEee-cCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccC
Q 009560 99 SWETFTLWRV-SESEFQFRT-SQGQFLTCDGEGCVVSATA-KSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLG 170 (532)
Q Consensus 99 ~wE~f~~~~~-~~~~~~lr~-~~~~~v~~~~~g~~~~a~~-~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~ 170 (532)
+..+++++.. +++++.|+. ..|+-+.+..++ ++-.. +.-.....|+++..+++.+.|+. ..|+-|++...
T Consensus 56 ~~Q~W~~~~~~~~g~~~i~N~~sg~CLd~~g~~--v~q~~C~~~~~~Q~W~~~~~~~G~~~i~n~~sg~CLdv~~~ 129 (167)
T d1sr4a_ 56 NIRNWKMEPGKHREYFRFVNQSLGTCVEAYGNG--LIHDICSLDKLAQEFELLPTDSGAVVIKSVSQGRCVTYNPV 129 (167)
T ss_dssp GGGCEEEEECSSTTCEEEEETTTCCEEEEETTE--EEEECCCTTCGGGCEEEEEBTTSCEEEEETTTCCEEEECSS
T ss_pred ccceEEEEecCCCCEEEEEECCCCcEEecCCCc--EEEEecCCCChHHeEEEEEecCceEEEEeccccEEEEecCC
Confidence 4566676664 678899998 778988776443 44433 33235789999998777889987 77998887653
|
| >d1q1ua_ b.42.1.1 (A:) Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibrobast growth factor homologous factor 1 (FHF1b, FGF12b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.94 E-value=5 Score=33.02 Aligned_cols=77 Identities=17% Similarity=0.274 Sum_probs=60.7
Q ss_pred ccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCc
Q 009560 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPE 143 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e 143 (532)
-|--.+|-+. ||.|+.....| .|..-|+.-+..-.|++.-++-+.+.+|+ ..+.|+|.+..|- |-+... +...+
T Consensus 4 ~g~v~rLycr-~g~~L~I~~dG--~V~Gt~~~~s~~s~le~~sv~~g~V~Irgv~s~~YLcmn~~G~-ly~s~~-~~~eC 78 (138)
T d1q1ua_ 4 KGIVTRLFSQ-QGYFLQMHPDG--TIDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGY-LYSSDV-FTPEC 78 (138)
T ss_dssp CCEEEEEEET-TTEEEEECTTS--CEEEESCTTSGGGCEEEEEEETTEEEEEETTTCCEEEECTTSC-EEEESS-CCGGG
T ss_pred cceEEEEEcC-CCcEEEEcCCC--cEecccCCCCCCceEEEEeccCCEEEEEEcccccEEEECCCCC-EecCCc-CCccc
Confidence 3455678874 79899987554 67777777777777887778888999999 8999999999985 877655 67888
Q ss_pred eEE
Q 009560 144 TFE 146 (532)
Q Consensus 144 ~F~ 146 (532)
.|.
T Consensus 79 ~F~ 81 (138)
T d1q1ua_ 79 KFK 81 (138)
T ss_dssp CEE
T ss_pred ceE
Confidence 885
|
| >d1ihka_ b.42.1.1 (A:) Fibroblast growth factor 9, FGF9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 9, FGF9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.76 E-value=4.5 Score=34.12 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=60.9
Q ss_pred eEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEecCCeEEEEe-cCCeEEEEeCCCceEEEeecCCCCCceEE
Q 009560 68 QVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVSESEFQFRT-SQGQFLTCDGEGCVVSATAKSPSTPETFE 146 (532)
Q Consensus 68 ~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~~~~~~lr~-~~~~~v~~~~~g~~~~a~~~~~~~~e~F~ 146 (532)
.++|-+. +|.|+-.-..| .|.+.++.-+..-.|++..++.+.|.+|+ ..+.|+|.+..|- |.+. ..+...+.|.
T Consensus 12 ~~qLy~r-~g~~L~I~~dG--~V~Gt~~~~s~~s~lei~sv~~g~V~Irgv~s~~YLcmn~~G~-Lygs-~~~~~dC~F~ 86 (157)
T d1ihka_ 12 RRQLYCR-TGFHLEIFPNG--TIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGE-LYGS-EKLTQECVFR 86 (157)
T ss_dssp EEEEEET-TSCEEEECTTS--CEEEESSTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTCC-EEEE-SSCCGGGCEE
T ss_pred EEEEEec-CCcEEEECCCC--eEEeeccCCCCcceEEEEeccCCEEEEEEcccccEEEECCCCC-EEec-CCCCCCceEE
Confidence 5778874 68889997554 67888888888888988888889999999 8899999999985 8775 4567889995
|
| >d1nowa1 c.1.8.6 (A:200-552) beta-hexosaminidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-hexosaminidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.94 E-value=7.2 Score=36.91 Aligned_cols=136 Identities=10% Similarity=0.104 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCCEEEEcccc---ccccCC-----------CCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCCCCCCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGW---WIAFDP-----------DPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHAAPGSQ 293 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~w---w~~~~~-----------~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~~pGsq 293 (532)
++.|+.|+..++|.+-+.+.= |.+.-+ .+.+.| .-+.+.++++.|+++||.||-.+-. ||..
T Consensus 21 k~~id~ma~~K~N~lhlHl~D~~~~~~e~~~~P~l~~~g~~~~~~~y---T~~d~~~lv~yA~~rgI~iiPEid~-PGH~ 96 (353)
T d1nowa1 21 LKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVY---TPNDVRMVIEYARLRGIRVLPEFDT-PGHT 96 (353)
T ss_dssp HHHHHHHHHTTCCEEEEECCCSSCCCBCCSSCHHHHHHHSSSTTSCB---CHHHHHHHHHHHHHTTCEEEEEEEE-SSSC
T ss_pred HHHHHHHHHcCCcEEEEEEecCCCceeccCCCcchhhcCCCCCCCCc---CHHHHHHHHHHHHHCCCEEEecccc-hhhH
Confidence 577888999999999876621 111111 011223 5688999999999999999988753 5533
Q ss_pred CCCCC--CC----CCC--------CCCCCCChhhHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCC-------------
Q 009560 294 NGMEH--SA----SRD--------GTTDWPASDYISQTLDVIDFLASRYAKHPALLGIELLNEPSAA------------- 346 (532)
Q Consensus 294 n~~~~--sg----~~~--------g~~~W~~~~~~~~~~~~w~~la~ry~~~p~v~g~EL~NEP~~~------------- 346 (532)
..+-. +. ... ....-.+++..+-..++++.+++-|.+.--.+| .-|....
T Consensus 97 ~~~~~~~pel~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~v~~e~~~~F~~~~~HiG---gDE~~~~~w~~~~~~~~~~~ 173 (353)
T d1nowa1 97 LSWGKGQKDLLTPCYSRQNKLDSFGPINPTLNTTYSFLTTFFKEISEVFPDQFIHLG---GDEVEFKCWESNPKIQDFMR 173 (353)
T ss_dssp TTHHHHSTTCEEECCC----CCSEEEECTTCHHHHHHHHHHHHHHHHHCCSSEEEEE---CCSCCCHHHHTCHHHHHHHH
T ss_pred HHHHHHhhhhcCCccccCCcCCCccccCCCchhhHHHHHHHHHHHHHhhccceeeee---cccccccccccChHHHHHHH
Confidence 22100 00 000 001112456677777889999988875322233 3344310
Q ss_pred ----CCCcccH-HHHHHHHHHHHHhhCCC
Q 009560 347 ----TVPLDIL-VPYYKQGYQIVRKYSPT 370 (532)
Q Consensus 347 ----~~~~~~l-~~~~~~~~~aIR~~~~~ 370 (532)
......+ ..|.+++.+.|++.+.+
T Consensus 174 ~~g~~~~~~~l~~~f~~~~~~~~~~~gk~ 202 (353)
T d1nowa1 174 QKGFGTDFKKLESFYIQKVLDIIATINKG 202 (353)
T ss_dssp HTTCTTCHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHcCCc
Confidence 0111233 33678899999988754
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=80.93 E-value=6.8 Score=31.59 Aligned_cols=85 Identities=12% Similarity=0.136 Sum_probs=60.7
Q ss_pred ccceEEEEEecCCeEEEEecCCCceeEEcCCCCCCcceEEEEEec--CCeEEEEe-c-CCeEEEEeC----CCceEEEee
Q 009560 65 DGTQVQIKSVTLEKYVCAESGGGTDVSVTRDVASSWETFTLWRVS--ESEFQFRT-S-QGQFLTCDG----EGCVVSATA 136 (532)
Q Consensus 65 ~g~~v~~~s~~~~~yv~ae~gg~~~l~anr~~~~~wE~f~~~~~~--~~~~~lr~-~-~~~~v~~~~----~g~~~~a~~ 136 (532)
++....+++...++.+.+.++.|+.++.-...-++-..|.+...+ ++.+.||. . .++.+.+.+ .|+.|+.-.
T Consensus 45 ~~~~y~i~~~~~~~~l~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~~~g~y~i~~~~~s~~~Ldv~~~~~~nGt~v~~~~ 124 (138)
T d1qxma2 45 TKSAYTLKCQENNRYLTWIQNSNNYVETYQSTDSLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIVDS 124 (138)
T ss_dssp TTTEEEEEETTTTEEEEECCSTTCBEEEECCCSSGGGCEEEEEETTEEEEEEEEETTCTTEEEEEGGGCCSTTCBEEEEE
T ss_pred CcCEEEEEeCCCCCEEccccCCCcEEEEEcCCCChhcEEEEeccccCCCcEEEEEecCCCccEEECCCCcCCCCEEEEEC
Confidence 345678999999999999888888887765555666777766554 45789997 4 477776653 233566666
Q ss_pred cCCCCCceEEEEE
Q 009560 137 KSPSTPETFEIER 149 (532)
Q Consensus 137 ~~~~~~e~F~~v~ 149 (532)
..-++.+.|.|..
T Consensus 125 ~~g~~nQ~W~l~~ 137 (138)
T d1qxma2 125 YHGNTNQQWIINL 137 (138)
T ss_dssp CCCSGGGCEEEEE
T ss_pred CCCCccceEEEEE
Confidence 6667888888764
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=80.74 E-value=0.99 Score=43.79 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=37.7
Q ss_pred HHHHHHHHH-cCCCEEEE-ccccccccCCCCCCCC-----Cc--ChHHHHHHHHHHHHHcC----CEEEEEc
Q 009560 228 IEDFNFLYR-HGINTVRI-PVGWWIAFDPDPPAPF-----IG--GSLEALDNALSWAEAYN----IKCIIDL 286 (532)
Q Consensus 228 e~d~~~la~-~G~N~VRI-pv~ww~~~~~~~~~~~-----~~--~~l~~Ld~~v~~a~k~G----i~VILDl 286 (532)
.+-++.|++ +|+|+|-| ||.- .....+..+. ++ +..+.++++|+.|.++| |+||||+
T Consensus 72 ~~kLdYl~~~LGv~~I~L~Pi~~--~~~~~GY~~~d~~~id~~~Gt~~d~~~lv~~~H~~g~~~~I~VilD~ 141 (432)
T d1ji1a3 72 DQKLGYIKKTLGANILYLNPIFK--APTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDG 141 (432)
T ss_dssp HHTHHHHHTTTCCCEEEESCCEE--CSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HHHhhHHHhhcCCCEEEeCCCCc--CCCCCCcccccccccCcccCCHHHHHHHHHHHHHhhhhcceeEeccc
Confidence 356788986 99999998 4411 0000011110 11 46899999999999887 7899995
|
| >d1ijta_ b.42.1.1 (A:) Fibroblast growth factor 4 (FGF4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 4 (FGF4) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.32 E-value=1.5 Score=35.95 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=45.9
Q ss_pred CCeEEEEeCCCceEEEeecCCCCCceEEEEEcCCCcEEEEe-cCCceEEeccCceEEeCC
Q 009560 119 QGQFLTCDGEGCVVSATAKSPSTPETFEIERNNDSRVHIKL-KSGTYLQATLGNQLTSDY 177 (532)
Q Consensus 119 ~~~~v~~~~~g~~~~a~~~~~~~~e~F~~v~~~~~~v~i~a-~nG~~l~a~~~~~v~ad~ 177 (532)
.|.|+....+|. |..+++. .....|++.--+.+.|+|+. ..+.|||.+..|.|.+..
T Consensus 14 ~g~~L~I~~dG~-V~Gt~~~-~~~~~l~~~sv~~g~V~I~gv~t~~YLcmn~~G~Lygs~ 71 (128)
T d1ijta_ 14 IGFHLQALPDGR-IGGAHAD-TRDSLLELSPVERGVVSIFGVASRFFVAMSSKGKLYGSP 71 (128)
T ss_dssp TCEEEEECTTSC-EEEESSC-CGGGCEEEEEEETTEEEEEETTTTEEEEECTTCCEEEES
T ss_pred CceEEEECCCCc-EecccCC-CCceeEEEEeccCCEEEEEEeccccEEEECCCCCEEECc
Confidence 388999987775 8887764 56777887776678999998 889999999989887754
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=80.05 E-value=0.87 Score=41.64 Aligned_cols=53 Identities=15% Similarity=0.254 Sum_probs=36.1
Q ss_pred HHHHHHHHHcCCCEEEEccccccccCCCCCCCCCcChHHHHHHHHHHHHHcCCEEEEEcCC
Q 009560 228 IEDFNFLYRHGINTVRIPVGWWIAFDPDPPAPFIGGSLEALDNALSWAEAYNIKCIIDLHA 288 (532)
Q Consensus 228 e~d~~~la~~G~N~VRIpv~ww~~~~~~~~~~~~~~~l~~Ld~~v~~a~k~Gi~VILDlH~ 288 (532)
++-++.+++.||+.|=..+. .++.. .+...+++++++++|+++||+||+|+-.
T Consensus 20 ~~yi~~a~~~Gf~~iFTSL~-----~~e~~---~~~~~~~~~~l~~~a~~~g~~vi~DIsp 72 (244)
T d1x7fa2 20 MAYISAAARHGFSRIFTCLL-----SVNRP---KEEIVAEFKEIINHAKDNNMEVILDVAP 72 (244)
T ss_dssp HHHHHHHHTTTEEEEEEEEC-----CC-----------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEecCc-----cCCCC---HHHHHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 45677888899987755442 12211 2346789999999999999999999864
|