Citrus Sinensis ID: 009605

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-
Protein Sequence
MLPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEccccccccEEEEEEEcccccccccEEEEEEEcccccccccEEEEEEcccEEEEEEEEEcccEEEEEcccccccHHHHHHHccEEEEEccHHHHHHHHHHHHHHcccccccccccccHHHHHHHccccEEEccccccccccccccccccEEEEEEcccccccHHHHHHHHcccccccEEEEEEcccccEEEEEcccccccccccEEEccHHHHHHHHHccccccccEEEEcccHHHHHHHcHHHHHHHHHHcccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccEEccccccHHHHHHHHHHHHccccccccccEEEcccccccccccccccccccccccccccccccccccEEEccEEEEEcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHcccHccccccccHHccHccccHHHHHHHHHHHHcHHHHcHHHHEEcccccccEEEEccEEEccEEEEEEEcccccccccEEEEEEEcccccccHccEEEEEcccEEEEEEEEEccccEEEEcccccHHHHHHHHHccEEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEccccccEEEccHHHcccccEEEEEEEccccccHHHHHHHHcccccccEEEEEEcccccEEEEEccccccccccEEEEccHHHHHHHHHHcccccccEEEEcccHHHHHHHcHHHHHHHHHHccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHcccccccEEEcccccHHHHHHHHHHHHHcccccccccccEEccccHHHHHHHHHHccccccccHHHcccccccccEEEEEcEEEEEccccccccccccHccccccccccccccccc
Coil and Loop (DISEMBL)
mlpassslsslsNSLTLLLLICTLLltspsnalkypfhprdilpvlprqvswpiLNALNGAadllpafvgsasdqtgtvewkgacfyqnqawmefhnksgsefgggtlhikvsdahswtcMDLYvfatpyrvtwDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVfplftntgwgensnigflkkhmgasfeqrpepwftnvtveeihsgdflAVSKirgrwggfetLEKWVTGAYAGHTAVCLrdsegklwvgesghendegqdiiailpwdewwdfevnkddsnphiallplhpdmrAKFNETAAWEYALsmdgkpygyhnMIFSWidtrsgnypppldAHLVASGMTMWNHIQPAYAANMWNEALNKRlgtegldlpdilveterrgtpfdelltipeqddwiysdgkstSCVAFVLEMYKeaglfdpigssiqvtEFTIKDAYSlrffennssrlpkwcndadtvklpycqirgkyrmelpgynvldpyphmnercpsmppkysrtanc
Flexible Loop (DISEMBL)
mlpassslsSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGesghendegQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVEterrgtpfdelltipeqddwiysdGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFennssrlpkwcndadtVKLPYCQIRGKYRMELPGYNVLDPYPHMnercpsmppkysrtanc
Low Complexity Region (SEG)
MLPAssslsslsnsltllllictllltspsNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC
Disordered region (IsUnstruct)
*************SLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPY********************
Disordered Region (DISOPRED)
************NSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPK*******
Disordered Region (DISEMBL)
***********SNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSM**********
Disordered Region (DISPRO)
******SLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSR****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	531
224115304	526	predicted protein [Populus trichocarpa]	0.981	0.990	0.823	0.0
255563941	524	conserved hypothetical protein [Ricinus	0.979	0.992	0.813	0.0
224124332	526	predicted protein [Populus trichocarpa]	0.971	0.980	0.812	0.0
357494401	525	hypothetical protein MTR_5g092140 [Medic	0.988	1.0	0.775	0.0
356553265	525	PREDICTED: uncharacterized protein LOC10	0.941	0.952	0.816	0.0
225461019	531	PREDICTED: uncharacterized protein LOC10	0.998	0.998	0.785	0.0
297799288	522	hypothetical protein ARALYDRAFT_913846 [	0.943	0.959	0.818	0.0
356501509	519	PREDICTED: uncharacterized protein LOC10	0.941	0.963	0.808	0.0
15236947	523	uncharacterized protein [Arabidopsis tha	0.937	0.952	0.815	0.0
15239765	531	uncharacterized protein [Arabidopsis tha	0.945	0.945	0.782	0.0

>gi|224115304|ref|XP_002316997.1| predicted protein [Populus trichocarpa] gi|222860062|gb|EEE97609.1| predicted protein [Populus trichocarpa]

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/522 (82%), Positives = 479/522 (91%), Gaps = 1/522 (0%)

Query: 10  SLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFV 69
           SL   LT+ L +  L   S S A+K PFHP+D+LP+LPRQVSWPILN LNGAADLLP FV
Sbjct: 6   SLKTILTISLFLFFLTPQS-SLAIKVPFHPQDLLPLLPRQVSWPILNYLNGAADLLPTFV 64

Query: 70  GSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATP 129
           G+AS    T EWKGACFY+N+AWMEFHNK+GSEFGGGTLH+KVS AHSWTCMD+YVFATP
Sbjct: 65  GAASALNDTGEWKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSKAHSWTCMDIYVFATP 124

Query: 130 YRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTN 189
           YRVTWDYYFLSREHTLEF EW+ K EYEYVK +GVSIFLMQAGMLGTL ALWDVFPLFTN
Sbjct: 125 YRVTWDYYFLSREHTLEFKEWDSKAEYEYVKRQGVSIFLMQAGMLGTLSALWDVFPLFTN 184

Query: 190 TGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKW 249
           TGWGENSNIGFLKKHMGA+FEQRP+PW  N++V++IHSGDFLA+SKIRGRWGGFETLEKW
Sbjct: 185 TGWGENSNIGFLKKHMGATFEQRPQPWVNNISVDDIHSGDFLAISKIRGRWGGFETLEKW 244

Query: 250 VTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIAL 309
           V+GAYAGH+AVCL+DSEGKLWVGESGHEN++G+DIIA+LPWDEWW+FE+NKDDSNPHIAL
Sbjct: 245 VSGAYAGHSAVCLKDSEGKLWVGESGHENEQGEDIIAVLPWDEWWEFELNKDDSNPHIAL 304

Query: 310 LPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTM 369
           LPLHPD+RAKFNETAAWEYALSM+GKPYGYHNMIFSWIDT  GNYPPPLD+H+VAS MT+
Sbjct: 305 LPLHPDVRAKFNETAAWEYALSMNGKPYGYHNMIFSWIDTLDGNYPPPLDSHVVASVMTV 364

Query: 370 WNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGK 429
           WNH+QP YAANMWNEALNKRLGT+GLDLPD+LVE E+RG+ F ELLTIPEQDDW+Y+DGK
Sbjct: 365 WNHMQPEYAANMWNEALNKRLGTQGLDLPDVLVEVEKRGSSFGELLTIPEQDDWLYADGK 424

Query: 430 STSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKL 489
           STSC+AFVLEMYKEAGLFDPI  S+QVTEFTIKDAY+LRFFENNSSRLPKWCND D VKL
Sbjct: 425 STSCIAFVLEMYKEAGLFDPISGSVQVTEFTIKDAYTLRFFENNSSRLPKWCNDGDDVKL 484

Query: 490 PYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC 531
           P+CQI+GKYRMELP YN +DPYPHMNERCPS+PPKY RT NC
Sbjct: 485 PFCQIKGKYRMELPEYNTMDPYPHMNERCPSLPPKYYRTQNC 526

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563941|ref|XP_002522970.1| conserved hypothetical protein [Ricinus communis] gi|223537782|gb|EEF39400.1| conserved hypothetical protein [Ricinus communis]

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/521 (81%), Positives = 479/521 (91%), Gaps = 1/521 (0%)

Query: 12  SNSLTLLLLIC-TLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVG 70
           S SLT++L+I  +  + +  +A++ PFHP+D+LP+LPRQVSWPILN LN A DLLP FVG
Sbjct: 4   SLSLTIILIISFSFSIFAAISAVEVPFHPQDLLPLLPRQVSWPILNRLNSAVDLLPTFVG 63

Query: 71  SASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPY 130
           +A+    T EWKGACFY+N AWMEFHNK+GS+FGGGTLHIK+S+AHSWTCMDLYVFATPY
Sbjct: 64  AANSLNNTAEWKGACFYKNTAWMEFHNKTGSQFGGGTLHIKISNAHSWTCMDLYVFATPY 123

Query: 131 RVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNT 190
           RVTWDYYFLS EHTLEF EWEGK EYEYVKN+GVSIFLMQAGMLGTL+ALWDVFPLFTNT
Sbjct: 124 RVTWDYYFLSWEHTLEFKEWEGKAEYEYVKNRGVSIFLMQAGMLGTLQALWDVFPLFTNT 183

Query: 191 GWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWV 250
           GWGENSNIGFL+KHMGA+FE+RP+PW TN+T ++IHSGDFLA+SKIRGRWGGFETLEKWV
Sbjct: 184 GWGENSNIGFLEKHMGATFEERPQPWVTNITTDDIHSGDFLAISKIRGRWGGFETLEKWV 243

Query: 251 TGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALL 310
           +GAYAGHTAVCLRDSEGKLWVGESGHEN++G+DIIA+LPWDEWWDFE+ KDDSNPHIALL
Sbjct: 244 SGAYAGHTAVCLRDSEGKLWVGESGHENEQGEDIIAVLPWDEWWDFELTKDDSNPHIALL 303

Query: 311 PLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMW 370
           PLHPDM+AKFNETAAW+YALSM+G+PYGYHNMIFSWIDT   NYPPPLDAHLVAS MT+W
Sbjct: 304 PLHPDMQAKFNETAAWDYALSMNGQPYGYHNMIFSWIDTIDKNYPPPLDAHLVASVMTVW 363

Query: 371 NHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKS 430
           + IQPAYAANMWNEALNKRLGT+GL LPDILVE E+RG+ F ELL++PEQDDW+Y+DGKS
Sbjct: 364 SQIQPAYAANMWNEALNKRLGTQGLGLPDILVEVEKRGSSFGELLSVPEQDDWLYTDGKS 423

Query: 431 TSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLP 490
           TSC+AFVL MYKEAGLFDPI SSIQVTEFTIKDAY+LRFFEN+SSRLPKWCND D VKLP
Sbjct: 424 TSCIAFVLAMYKEAGLFDPIASSIQVTEFTIKDAYALRFFENDSSRLPKWCNDGDDVKLP 483

Query: 491 YCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC 531
           +CQI+GKYRMELPGYN +DPYPHMNE CPS+PPKYSR  NC
Sbjct: 484 FCQIKGKYRMELPGYNTMDPYPHMNEMCPSLPPKYSRPRNC 524

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124332|ref|XP_002319305.1| predicted protein [Populus trichocarpa] gi|222857681|gb|EEE95228.1| predicted protein [Populus trichocarpa]

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/518 (81%), Positives = 475/518 (91%), Gaps = 2/518 (0%)

Query: 16  TLLLLICTLLLTSPSNAL--KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSAS 73
           TLL +   L   +P ++L  K PFHP+D+LP+LPRQVSWPILN L+GA DLLP FVG+AS
Sbjct: 9   TLLTISLFLFFVTPQSSLAAKLPFHPQDLLPLLPRQVSWPILNRLHGAVDLLPTFVGAAS 68

Query: 74  DQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVT 133
               T +WKGACFY+N+AWMEFHNK+GSEFGGGTLH+KVS+AHSWTCMD+YVFATPYRVT
Sbjct: 69  ALNETGDWKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSNAHSWTCMDIYVFATPYRVT 128

Query: 134 WDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWG 193
           WDYY LSREHTLEF EWE K EYEYVKN+GVSIFLM AGMLGTL+ALWDVFPLFTNTGWG
Sbjct: 129 WDYYLLSREHTLEFKEWESKAEYEYVKNRGVSIFLMHAGMLGTLQALWDVFPLFTNTGWG 188

Query: 194 ENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGA 253
           ENSNIGFL+KHMGA+FEQRP+PW TN++V++IHSGDFL +SKIRGRWGGFETLEKWV+GA
Sbjct: 189 ENSNIGFLEKHMGATFEQRPQPWATNISVDDIHSGDFLVISKIRGRWGGFETLEKWVSGA 248

Query: 254 YAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLH 313
           YAGH+AV LRDSEGKLWVGESG+EN++G+D+IA+LPWDEWW+FE+NKD+SNPHIALLPLH
Sbjct: 249 YAGHSAVFLRDSEGKLWVGESGNENEQGEDVIAVLPWDEWWEFELNKDNSNPHIALLPLH 308

Query: 314 PDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHI 373
           PD+RAKFNETAAWEYALSM G PYGYHN+IFSWIDT  GNYPPPLDAHLVAS MT+WNHI
Sbjct: 309 PDVRAKFNETAAWEYALSMKGNPYGYHNLIFSWIDTLDGNYPPPLDAHLVASFMTVWNHI 368

Query: 374 QPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSC 433
           QP YAANMWNEALNKRLGT+GLDLPDILVE E+RG+ F +LLTIPEQDDW+Y+DGKSTSC
Sbjct: 369 QPEYAANMWNEALNKRLGTQGLDLPDILVEVEKRGSSFGKLLTIPEQDDWLYTDGKSTSC 428

Query: 434 VAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQ 493
           +AFVLEMYKEAGLFDPI SS+QVTEFTIKDAY+LRFFENNSSRLPKWCND D VKLP+CQ
Sbjct: 429 IAFVLEMYKEAGLFDPITSSVQVTEFTIKDAYTLRFFENNSSRLPKWCNDGDDVKLPFCQ 488

Query: 494 IRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC 531
           I+G+YRMELP YN +DPYPHMNERCPS+PPKY RT NC
Sbjct: 489 IKGQYRMELPEYNTMDPYPHMNERCPSLPPKYFRTQNC 526

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494401|ref|XP_003617489.1| hypothetical protein MTR_5g092140 [Medicago truncatula] gi|355518824|gb|AET00448.1| hypothetical protein MTR_5g092140 [Medicago truncatula]

 Score =  907 bits (2343), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/530 (77%), Positives = 474/530 (89%), Gaps = 5/530 (0%)

Query: 2   LPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGA 61
           + +SS +++ + +  L+ L C    T      K PFHPRD+LP++P+Q+SWPI+N+L+ A
Sbjct: 1   MASSSKVAACAITTLLIFLTCLQFST-----FKSPFHPRDLLPLMPKQISWPIINSLHSA 55

Query: 62  ADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCM 121
            D+LP FV +AS    T EWKGACFY+NQAWMEFHNK+GS+FGGGTLH+KVS+AHS+TCM
Sbjct: 56  VDILPVFVAAASSPNNTPEWKGACFYKNQAWMEFHNKTGSQFGGGTLHLKVSNAHSYTCM 115

Query: 122 DLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALW 181
           D+Y+FATPYRVTWDYYFLSREHTLE  EW+G+ EYEYVKN G+SIFLM+AGMLGTL+ALW
Sbjct: 116 DIYIFATPYRVTWDYYFLSREHTLEIKEWDGRAEYEYVKNHGLSIFLMKAGMLGTLQALW 175

Query: 182 DVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWG 241
           +VFPLFTNTGWGE SNIGF++KHMGASFE R +PW TN++V++IHSGDFLAVSKIRGRWG
Sbjct: 176 EVFPLFTNTGWGEKSNIGFMEKHMGASFETRSQPWVTNISVDDIHSGDFLAVSKIRGRWG 235

Query: 242 GFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKD 301
            FETLEKWV+GAYAGHTAVCLRDS+GKLWVGESGHEN++G+DIIA++ WDEWWDFE+NKD
Sbjct: 236 AFETLEKWVSGAYAGHTAVCLRDSDGKLWVGESGHENEKGEDIIAMIAWDEWWDFELNKD 295

Query: 302 DSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAH 361
           DSNPHIALLPLHPDMRA+FNETAAWEYALSMDG+PYGYHNMIFSWIDT SGNYPPPLDA+
Sbjct: 296 DSNPHIALLPLHPDMRARFNETAAWEYALSMDGQPYGYHNMIFSWIDTLSGNYPPPLDAN 355

Query: 362 LVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQD 421
           +VA  MT+W+ +QPAYAANMWNEALNKRLGT+GLDLP++LVE E+RG+ F ELLTIPEQD
Sbjct: 356 VVACVMTIWSQLQPAYAANMWNEALNKRLGTKGLDLPEVLVEVEKRGSSFAELLTIPEQD 415

Query: 422 DWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPKWC 481
           DW YSDGKSTSCVAF+L MYKEAGLFDPI SSIQVTEFTIKDAY L FFENNSSRLP WC
Sbjct: 416 DWTYSDGKSTSCVAFILAMYKEAGLFDPIASSIQVTEFTIKDAYLLNFFENNSSRLPTWC 475

Query: 482 NDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC 531
           ND DTVKLPYCQI+GKYRMELPGYN + PYPHMNERCPS+P KYSRT NC
Sbjct: 476 NDGDTVKLPYCQIKGKYRMELPGYNTMQPYPHMNERCPSLPTKYSRTKNC 525

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553265|ref|XP_003544978.1| PREDICTED: uncharacterized protein LOC100796964 [Glycine max]

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/500 (81%), Positives = 461/500 (92%)

Query: 32  ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
           ALK PFHPRD+LP+LPRQ+SWPILN L+ A DLLP FVG+A      ++WKGACFY+N+A
Sbjct: 26  ALKSPFHPRDVLPLLPRQLSWPILNRLHSAVDLLPVFVGAAFSPVDNLKWKGACFYENKA 85

Query: 92  WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
           WM FHNKSG+++GGGTLHIKVS+AHSWTCMDLY+FA+PYRVTWDYYFL+REHTLE  EWE
Sbjct: 86  WMVFHNKSGTQYGGGTLHIKVSNAHSWTCMDLYIFASPYRVTWDYYFLAREHTLEIKEWE 145

Query: 152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
           GK EYEYVKN G+SIFL+QAGMLGTLEALW+VFPLFTNTGWGENSNI FL+KHMGASFE 
Sbjct: 146 GKAEYEYVKNHGLSIFLLQAGMLGTLEALWEVFPLFTNTGWGENSNIKFLEKHMGASFEV 205

Query: 212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
           RP+P+ TNV+V++IHSGDFLAVSKIRGRWG FETLEKWV+GAYAGHTAVCLRDS GKLWV
Sbjct: 206 RPQPFVTNVSVDDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSSGKLWV 265

Query: 272 GESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALS 331
           GESGHEN++G+DIIA++PW+EWWDFE+NKDDSNPHIALLPLHPD+RA+FNETAAWEYALS
Sbjct: 266 GESGHENEKGEDIIAVIPWEEWWDFELNKDDSNPHIALLPLHPDLRARFNETAAWEYALS 325

Query: 332 MDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLG 391
           M GKPYGYHNMIFSWIDT +GNYPPPLDA++VA  MT+W+ +QP YAANMWNEALNKRLG
Sbjct: 326 MAGKPYGYHNMIFSWIDTLNGNYPPPLDANVVACVMTIWSQLQPEYAANMWNEALNKRLG 385

Query: 392 TEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIG 451
           T+GLDLP++LVE E+RG+ FDELLTIPEQD W YSDGKSTSC+AF+LEMYKEAGLFDPI 
Sbjct: 386 TKGLDLPEVLVEVEKRGSSFDELLTIPEQDYWTYSDGKSTSCIAFILEMYKEAGLFDPIS 445

Query: 452 SSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPY 511
           SS+QVTEFTIKDAY L FFENNSSRLPKWCND DTVKLPYCQI+GKYRMELPGYN + PY
Sbjct: 446 SSVQVTEFTIKDAYILNFFENNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPY 505

Query: 512 PHMNERCPSMPPKYSRTANC 531
           PHMNE+CPS+PPKYSR  NC
Sbjct: 506 PHMNEKCPSLPPKYSRAQNC 525

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461019|ref|XP_002280959.1| PREDICTED: uncharacterized protein LOC100267545 [Vitis vinifera] gi|297737413|emb|CBI26614.3| unnamed protein product [Vitis vinifera]

 Score =  896 bits (2316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/532 (78%), Positives = 470/532 (88%), Gaps = 2/532 (0%)

Query: 1   MLPASSSLSSLSNS-LTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALN 59
           M P+S S   L  + L   LLI  L+   P +ALK P  PRDILP+LPRQ+SWPILN+L+
Sbjct: 1   MAPSSPSACLLQTTHLRTFLLISLLVFVPPIHALKPPIRPRDILPLLPRQLSWPILNSLH 60

Query: 60  GAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWT 119
            A DLLP FVGSAS    TVEWKG CFY+ +AWMEF+NKSGSEFGGGTLHIKVS AHSWT
Sbjct: 61  SAVDLLPTFVGSASSN-DTVEWKGTCFYETRAWMEFNNKSGSEFGGGTLHIKVSSAHSWT 119

Query: 120 CMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEA 179
           CMDLYVFATPY+VTWDYYFLSREHT+EFN WE K E+EYVKNKGVS+FLMQAGMLGTLEA
Sbjct: 120 CMDLYVFATPYQVTWDYYFLSREHTIEFNAWEEKAEFEYVKNKGVSVFLMQAGMLGTLEA 179

Query: 180 LWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGR 239
           LWDVFPLFTNTGWGEN+N+GFLKKHMGASF+ RP+PW TN++V+++HSGDFLA+SKIRGR
Sbjct: 180 LWDVFPLFTNTGWGENANLGFLKKHMGASFQTRPQPWVTNISVDDLHSGDFLAISKIRGR 239

Query: 240 WGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVN 299
           WGGFETLEKWVTG+YAGH+AVCLRDSEGKLWVGESGH N++G+D+I  LPWDEWWD  + 
Sbjct: 240 WGGFETLEKWVTGSYAGHSAVCLRDSEGKLWVGESGHRNEKGEDVIVTLPWDEWWDDVLT 299

Query: 300 KDDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLD 359
           +DDSN HIALLPLHP +RAKFNETAAWEYA S +GKPYGYHNMIFSWIDT   NYPPPLD
Sbjct: 300 QDDSNSHIALLPLHPHLRAKFNETAAWEYARSSEGKPYGYHNMIFSWIDTLDENYPPPLD 359

Query: 360 AHLVASGMTMWNHIQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPE 419
           AH+VAS MT+WN ++PAYAAN+WNEALNKRLGT+ L LP+ILVETE+RG+ FDELLTIPE
Sbjct: 360 AHVVASVMTVWNQMKPAYAANLWNEALNKRLGTQDLALPEILVETEKRGSSFDELLTIPE 419

Query: 420 QDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSSIQVTEFTIKDAYSLRFFENNSSRLPK 479
           QDDW+Y+DGKSTSCVAF+LEMYKEAGLF P  SSIQVTEFTIKDAY+L FFENNSSRLPK
Sbjct: 420 QDDWVYTDGKSTSCVAFILEMYKEAGLFGPSASSIQVTEFTIKDAYTLNFFENNSSRLPK 479

Query: 480 WCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPHMNERCPSMPPKYSRTANC 531
           WCND D V+LPYCQI+GKYRMELP YN LDPYPHMNERCPS+PPKY R+ANC
Sbjct: 480 WCNDGDNVQLPYCQIKGKYRMELPEYNTLDPYPHMNERCPSLPPKYLRSANC 531

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799288|ref|XP_002867528.1| hypothetical protein ARALYDRAFT_913846 [Arabidopsis lyrata subsp. lyrata] gi|297313364|gb|EFH43787.1| hypothetical protein ARALYDRAFT_913846 [Arabidopsis lyrata subsp. lyrata]

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/501 (81%), Positives = 455/501 (90%)

Query: 31  NALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQ 90
           +++K PFHPRD+LP+LPRQVSWP+LN+LN A DLLP F+GSAS +   VEWKGACFY+N+
Sbjct: 22  SSVKLPFHPRDLLPLLPRQVSWPVLNSLNTAVDLLPTFIGSASVKNDAVEWKGACFYENK 81

Query: 91  AWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEW 150
           AW+E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF+SREHT+EF EW
Sbjct: 82  AWLELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFVSREHTMEFKEW 141

Query: 151 EGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFE 210
           EGK EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F 
Sbjct: 142 EGKAEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFY 201

Query: 211 QRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLW 270
            RP+PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLW
Sbjct: 202 ARPKPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLW 261

Query: 271 VGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYAL 330
           VGESG+EN++G+D+IAILPW+EWW+FE  KDDSNPHIALLPLHPD RAKFN TAAWEYA 
Sbjct: 262 VGESGNENEKGEDVIAILPWEEWWEFEQTKDDSNPHIALLPLHPDYRAKFNVTAAWEYAR 321

Query: 331 SMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRL 390
           SMDGKPYGYHN+IFSWIDT SGNYPPPLDAHLVAS MT+W+ IQP YAANMWNEALNKRL
Sbjct: 322 SMDGKPYGYHNLIFSWIDTISGNYPPPLDAHLVASVMTVWSKIQPDYAANMWNEALNKRL 381

Query: 391 GTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPI 450
           GTEGLDLPD+LVE E+RG+ FDELL +PEQDDWIYSDGKSTSC+AF+LEMYKEAGLFDPI
Sbjct: 382 GTEGLDLPDVLVEVEKRGSSFDELLAVPEQDDWIYSDGKSTSCIAFILEMYKEAGLFDPI 441

Query: 451 GSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDP 510
            SSIQVTEFTIKDAY L+FFENN+SR PKWCND D VKLPYCQI GKYRMELPGYN ++P
Sbjct: 442 SSSIQVTEFTIKDAYMLKFFENNASRFPKWCNDNDDVKLPYCQILGKYRMELPGYNTMEP 501

Query: 511 YPHMNERCPSMPPKYSRTANC 531
           YPHMNE CPS+PPKY R  NC
Sbjct: 502 YPHMNEHCPSLPPKYHRPKNC 522

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501509|ref|XP_003519567.1| PREDICTED: uncharacterized protein LOC100789468 [Glycine max]

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/500 (80%), Positives = 459/500 (91%)

Query: 32  ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
           ALK PFHPRD+LP+LP+Q+SWPILN L+ A DLLP FVG+AS     ++WKGACFY+N+A
Sbjct: 20  ALKSPFHPRDVLPLLPKQLSWPILNRLHSAVDLLPVFVGAASSPDDNLKWKGACFYENKA 79

Query: 92  WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
           WM FHNKSG++FGGGTLH+KVS+AHSWTCMDLY+FATPYRVTWDYYFL+REHTLE  EWE
Sbjct: 80  WMVFHNKSGTQFGGGTLHLKVSNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEIKEWE 139

Query: 152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
           GK EYEYVKN G+SIFL+QAGMLGTL+ALW+VFPLFTNTGWGENSNI FL+KHMGASFE 
Sbjct: 140 GKAEYEYVKNHGLSIFLLQAGMLGTLQALWEVFPLFTNTGWGENSNIKFLEKHMGASFEV 199

Query: 212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
           RP+PW TNV+ ++IHSGDFLAVSKIRGRWG FETLEKWV+GAYAGHTAVCLRDS GKLWV
Sbjct: 200 RPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSSGKLWV 259

Query: 272 GESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALS 331
           GESGHEN++G+DIIA++PW+EWWDFE+N DDSNPHIALLPLHP +RA+FNETAAWEYALS
Sbjct: 260 GESGHENEKGEDIIAVIPWEEWWDFELNNDDSNPHIALLPLHPALRARFNETAAWEYALS 319

Query: 332 MDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLG 391
           M GKPYGYHNMIFSWIDT + NYPPPLDA++VA  MT+W+ +QP YAANMWNEALNKRLG
Sbjct: 320 MAGKPYGYHNMIFSWIDTLNENYPPPLDANVVACVMTIWSQLQPEYAANMWNEALNKRLG 379

Query: 392 TEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIG 451
           T+GLDL ++LVE E+RG+ FDELLTIPEQDDWIYSDGKSTSC+AF+LEMYKEAGLFDP+ 
Sbjct: 380 TKGLDLSEVLVEVEKRGSSFDELLTIPEQDDWIYSDGKSTSCIAFILEMYKEAGLFDPVA 439

Query: 452 SSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPY 511
           SS+QVTEFTIKDAY L FFENNS+RLPKWCND DTVKLPYCQI+GKYRM+LPGYN + PY
Sbjct: 440 SSVQVTEFTIKDAYILNFFENNSTRLPKWCNDGDTVKLPYCQIKGKYRMDLPGYNTMQPY 499

Query: 512 PHMNERCPSMPPKYSRTANC 531
           PHMNERCPS+PPKYSR  NC
Sbjct: 500 PHMNERCPSLPPKYSRPQNC 519

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236947|ref|NP_194432.1| uncharacterized protein [Arabidopsis thaliana] gi|4455225|emb|CAB36548.1| putative protein [Arabidopsis thaliana] gi|7269555|emb|CAB79557.1| putative protein [Arabidopsis thaliana] gi|18650639|gb|AAL75889.1| AT4g27020/F10M23_360 [Arabidopsis thaliana] gi|23505979|gb|AAN28849.1| At4g27020/F10M23_360 [Arabidopsis thaliana] gi|332659885|gb|AEE85285.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  887 bits (2292), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/498 (81%), Positives = 449/498 (90%)

Query: 34  KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWM 93
           K PFHPRD+LP+ PRQVSWP++N+LN A DLLP F+GSAS +   VEWKGACFY+N+AW+
Sbjct: 26  KLPFHPRDLLPLFPRQVSWPVVNSLNTAVDLLPTFIGSASVRNDAVEWKGACFYENKAWL 85

Query: 94  EFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGK 153
           E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF SREHT+EF EWEGK
Sbjct: 86  ELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFASREHTMEFKEWEGK 145

Query: 154 LEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRP 213
            EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F  RP
Sbjct: 146 AEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFYPRP 205

Query: 214 EPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGE 273
           +PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLWVGE
Sbjct: 206 KPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLWVGE 265

Query: 274 SGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMD 333
           SG+EN++G+D+IAILPW+EWW+FE  KDDSNPHIALLPLHPD RAKFN TAAWEYA SMD
Sbjct: 266 SGNENEKGEDVIAILPWEEWWEFEQTKDDSNPHIALLPLHPDYRAKFNVTAAWEYARSMD 325

Query: 334 GKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTE 393
           GKPYGYHN+IFSWIDT SGNYPPPLDA LVAS MT+W+ IQP YAANMWNEALNKRLGTE
Sbjct: 326 GKPYGYHNLIFSWIDTISGNYPPPLDAQLVASVMTVWSKIQPDYAANMWNEALNKRLGTE 385

Query: 394 GLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSS 453
           GLDLPD+LVE E+RG+ FDELL +PEQDDWIYSDGKSTSC+AF+LEMYKEAGLFDPI SS
Sbjct: 386 GLDLPDVLVEVEKRGSSFDELLAVPEQDDWIYSDGKSTSCIAFILEMYKEAGLFDPISSS 445

Query: 454 IQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPH 513
           IQVTEFTIKDAY L+FFE+N+SR PKWCND D VKLPYCQI GKYRMELPGYN ++PYPH
Sbjct: 446 IQVTEFTIKDAYMLKFFESNASRFPKWCNDNDVVKLPYCQILGKYRMELPGYNTMEPYPH 505

Query: 514 MNERCPSMPPKYSRTANC 531
           MNE CPS+PPKY R  NC
Sbjct: 506 MNEHCPSLPPKYHRPKNC 523

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239765|ref|NP_200298.1| uncharacterized protein [Arabidopsis thaliana] gi|9758267|dbj|BAB08766.1| unnamed protein product [Arabidopsis thaliana] gi|332009168|gb|AED96551.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/502 (78%), Positives = 450/502 (89%)

Query: 30  SNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQN 89
           + ++K PFHPRD+LP LPRQVSWPILN+L GAADLLP F+G+AS    +V+WKGACF++N
Sbjct: 30  AESVKSPFHPRDLLPHLPRQVSWPILNSLYGAADLLPTFIGTASSGNDSVDWKGACFFEN 89

Query: 90  QAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNE 149
            AW+EFHNKSGSEFGGGTLHIK   AHSWTCMDLYVFATPYRVTW +YF+SR+HT+EF E
Sbjct: 90  TAWLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFISRQHTVEFPE 149

Query: 150 WEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASF 209
           W+GK EYEYVKNKGVSIFLM AGMLGTL+ALWDVFPLF+NTGWGE+SN+ FL+KHMGA+F
Sbjct: 150 WDGKAEYEYVKNKGVSIFLMHAGMLGTLQALWDVFPLFSNTGWGESSNLAFLEKHMGANF 209

Query: 210 EQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKL 269
           E RPEPW TNVT ++I SGD LA+SKIRGRWGGFETLEKWV+GAYAGH+AV LRDSEGKL
Sbjct: 210 EPRPEPWVTNVTTDQIQSGDLLAISKIRGRWGGFETLEKWVSGAYAGHSAVALRDSEGKL 269

Query: 270 WVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYA 329
           WVGESG+END+G+D+IAILPW+EWW FE  KDDSNP IALLPLHPD+RAKF+  AAW+YA
Sbjct: 270 WVGESGNENDKGEDVIAILPWEEWWAFEQTKDDSNPQIALLPLHPDVRAKFDVAAAWKYA 329

Query: 330 LSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKR 389
            SM+GKPYGYHN+IFSWIDT S NYPPPLDAHLVAS MT+W+ +QP YAANMWNEALNKR
Sbjct: 330 RSMEGKPYGYHNLIFSWIDTVSENYPPPLDAHLVASFMTVWSQMQPEYAANMWNEALNKR 389

Query: 390 LGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDP 449
           LGTEGLDL D+LVE E+RG+ FD+LL +PE DDWIYSDGKSTSC+AF+LEMYKEAGLF P
Sbjct: 390 LGTEGLDLSDVLVEVEKRGSSFDKLLAVPELDDWIYSDGKSTSCIAFILEMYKEAGLFGP 449

Query: 450 IGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLD 509
           + SSIQVTEFTIKDAY L FFENN+SRLP WCND D+VKLPYCQI GKYRMELPGYN ++
Sbjct: 450 LASSIQVTEFTIKDAYMLNFFENNASRLPTWCNDNDSVKLPYCQILGKYRMELPGYNTME 509

Query: 510 PYPHMNERCPSMPPKYSRTANC 531
           PY HMNE+CP++PPKY+R  NC
Sbjct: 510 PYSHMNEQCPTLPPKYNRPDNC 531

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	531
TAIR|locus:2116347	523	AT4G27020 "AT4G27020" [Arabido	0.937	0.952	0.815	1.8e-243
TAIR|locus:2160165	531	AT5G54870 "AT5G54870" [Arabido	0.941	0.941	0.786	2.1e-235
TAIR|locus:2020553	523	AT1G70160 "AT1G70160" [Arabido	0.937	0.952	0.675	1.2e-200

TAIR|locus:2116347 AT4G27020 "AT4G27020" [Arabidopsis thaliana (taxid:3702)]

 Score = 2346 (830.9 bits), Expect = 1.8e-243, P = 1.8e-243
 Identities = 406/498 (81%), Positives = 449/498 (90%)

Query:    34 KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWM 93
             K PFHPRD+LP+ PRQVSWP++N+LN A DLLP F+GSAS +   VEWKGACFY+N+AW+
Sbjct:    26 KLPFHPRDLLPLFPRQVSWPVVNSLNTAVDLLPTFIGSASVRNDAVEWKGACFYENKAWL 85

Query:    94 EFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGK 153
             E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF SREHT+EF EWEGK
Sbjct:    86 ELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFASREHTMEFKEWEGK 145

Query:   154 LEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRP 213
              EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F  RP
Sbjct:   146 AEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFYPRP 205

Query:   214 EPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGE 273
             +PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLWVGE
Sbjct:   206 KPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLWVGE 265

Query:   274 SGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALSMD 333
             SG+EN++G+D+IAILPW+EWW+FE  KDDSNPHIALLPLHPD RAKFN TAAWEYA SMD
Sbjct:   266 SGNENEKGEDVIAILPWEEWWEFEQTKDDSNPHIALLPLHPDYRAKFNVTAAWEYARSMD 325

Query:   334 GKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLGTE 393
             GKPYGYHN+IFSWIDT SGNYPPPLDA LVAS MT+W+ IQP YAANMWNEALNKRLGTE
Sbjct:   326 GKPYGYHNLIFSWIDTISGNYPPPLDAQLVASVMTVWSKIQPDYAANMWNEALNKRLGTE 385

Query:   394 GLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGSS 453
             GLDLPD+LVE E+RG+ FDELL +PEQDDWIYSDGKSTSC+AF+LEMYKEAGLFDPI SS
Sbjct:   386 GLDLPDVLVEVEKRGSSFDELLAVPEQDDWIYSDGKSTSCIAFILEMYKEAGLFDPISSS 445

Query:   454 IQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPYPH 513
             IQVTEFTIKDAY L+FFE+N+SR PKWCND D VKLPYCQI GKYRMELPGYN ++PYPH
Sbjct:   446 IQVTEFTIKDAYMLKFFESNASRFPKWCNDNDVVKLPYCQILGKYRMELPGYNTMEPYPH 505

Query:   514 MNERCPSMPPKYSRTANC 531
             MNE CPS+PPKY R  NC
Sbjct:   506 MNEHCPSLPPKYHRPKNC 523

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2160165 AT5G54870 "AT5G54870" [Arabidopsis thaliana (taxid:3702)]

 Score = 2270 (804.1 bits), Expect = 2.1e-235, P = 2.1e-235
 Identities = 393/500 (78%), Positives = 449/500 (89%)

Query:    32 ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
             ++K PFHPRD+LP LPRQVSWPILN+L GAADLLP F+G+AS    +V+WKGACF++N A
Sbjct:    32 SVKSPFHPRDLLPHLPRQVSWPILNSLYGAADLLPTFIGTASSGNDSVDWKGACFFENTA 91

Query:    92 WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
             W+EFHNKSGSEFGGGTLHIK   AHSWTCMDLYVFATPYRVTW +YF+SR+HT+EF EW+
Sbjct:    92 WLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFISRQHTVEFPEWD 151

Query:   152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
             GK EYEYVKNKGVSIFLM AGMLGTL+ALWDVFPLF+NTGWGE+SN+ FL+KHMGA+FE 
Sbjct:   152 GKAEYEYVKNKGVSIFLMHAGMLGTLQALWDVFPLFSNTGWGESSNLAFLEKHMGANFEP 211

Query:   212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
             RPEPW TNVT ++I SGD LA+SKIRGRWGGFETLEKWV+GAYAGH+AV LRDSEGKLWV
Sbjct:   212 RPEPWVTNVTTDQIQSGDLLAISKIRGRWGGFETLEKWVSGAYAGHSAVALRDSEGKLWV 271

Query:   272 GESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYALS 331
             GESG+END+G+D+IAILPW+EWW FE  KDDSNP IALLPLHPD+RAKF+  AAW+YA S
Sbjct:   272 GESGNENDKGEDVIAILPWEEWWAFEQTKDDSNPQIALLPLHPDVRAKFDVAAAWKYARS 331

Query:   332 MDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKRLG 391
             M+GKPYGYHN+IFSWIDT S NYPPPLDAHLVAS MT+W+ +QP YAANMWNEALNKRLG
Sbjct:   332 MEGKPYGYHNLIFSWIDTVSENYPPPLDAHLVASFMTVWSQMQPEYAANMWNEALNKRLG 391

Query:   392 TEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIG 451
             TEGLDL D+LVE E+RG+ FD+LL +PE DDWIYSDGKSTSC+AF+LEMYKEAGLF P+ 
Sbjct:   392 TEGLDLSDVLVEVEKRGSSFDKLLAVPELDDWIYSDGKSTSCIAFILEMYKEAGLFGPLA 451

Query:   452 SSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLDPY 511
             SSIQVTEFTIKDAY L FFENN+SRLP WCND D+VKLPYCQI GKYRMELPGYN ++PY
Sbjct:   452 SSIQVTEFTIKDAYMLNFFENNASRLPTWCNDNDSVKLPYCQILGKYRMELPGYNTMEPY 511

Query:   512 PHMNERCPSMPPKYSRTANC 531
              HMNE+CP++PPKY+R  NC
Sbjct:   512 SHMNEQCPTLPPKYNRPDNC 531

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2020553 AT1G70160 "AT1G70160" [Arabidopsis thaliana (taxid:3702)]

 Score = 1942 (688.7 bits), Expect = 1.2e-200, P = 1.2e-200
 Identities = 339/502 (67%), Positives = 407/502 (81%)

Query:    32 ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
             +LK PF   D+LP+LPRQVSWP+LN+ + A DLLP F+GS +    ++EWKGACF  N+A
Sbjct:    24 SLKVPFSVNDVLPMLPRQVSWPVLNSFHNAVDLLPVFIGSVTPNNVSIEWKGACFNGNEA 83

Query:    92 WMEF--HNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNE 149
              ++    ++     GGG LH+K S AHS TCMDLYVFATPYR+TWDYYF +R+HTL F+ 
Sbjct:    84 RLDITGSDRDVPGLGGGVLHLKTSKAHSLTCMDLYVFATPYRITWDYYFSARDHTLNFDS 143

Query:   150 WEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASF 209
             WE K E EYVK  GVS+FLM +GMLGTL +L DV PLF+NT WG+N+N+ FL KHMGA+F
Sbjct:   144 WEEKAELEYVKEHGVSVFLMPSGMLGTLLSLIDVLPLFSNTAWGQNANLAFLTKHMGATF 203

Query:   210 EQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKL 269
             E+R +PW + +  E++HSGDFLAVSKIRGRWGGFETLEKWVTGA+AGHTAVCL+D  G L
Sbjct:   204 EKRSQPWRSMINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDDLGNL 263

Query:   270 WVGESGHENDEGQDIIAILPWDEWWDFEVNKDDSNPHIALLPLHPDMRAKFNETAAWEYA 329
             WVGESGHEN++G++II ++PWDEWW+  + KD+SNP +ALLPLHPD+RAKFN TAAWEYA
Sbjct:   264 WVGESGHENEKGEEIIVVIPWDEWWELTL-KDNSNPQVALLPLHPDIRAKFNNTAAWEYA 322

Query:   330 LSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNHIQPAYAANMWNEALNKR 389
              SM GKPYGYHNMIFSWIDT   NYPPPLDAHLV S M+MW  +QPAYAANMWNEALNKR
Sbjct:   323 RSMLGKPYGYHNMIFSWIDTLGDNYPPPLDAHLVISVMSMWTRVQPAYAANMWNEALNKR 382

Query:   390 LGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDP 449
             LGTE LDL  IL ET RRG  FDELLTIPEQD+W+YSDGKST+CVAF+L MYK AG+FDP
Sbjct:   383 LGTEDLDLYGILEETARRGMSFDELLTIPEQDEWVYSDGKSTTCVAFILAMYKAAGIFDP 442

Query:   450 IGSSIQVTEFTIKDAYSLRFFENNSSRLPKWCNDADTVKLPYCQIRGKYRMELPGYNVLD 509
             +   IQVTEFTI+DAY+L+ FE+N +RLP WCN  +  KL +CQI G+YRMELPGYN + 
Sbjct:   443 LADHIQVTEFTIRDAYTLKLFESNQTRLPSWCNTEEG-KLDFCQILGEYRMELPGYNTIY 501

Query:   510 PYPHMNERCPSMPPKYSRTANC 531
             PYP+MN+ CPS+PP Y R + C
Sbjct:   502 PYPNMNQNCPSLPPNYERPSKC 523


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.452    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      531       505   0.00086  119 3  11 22  0.40    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  638 (68 KB)
  Total size of DFA:  388 KB (2186 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.69u 0.20s 39.89t   Elapsed:  00:00:01
  Total cpu time:  39.69u 0.20s 39.89t   Elapsed:  00:00:01
  Start:  Fri May 10 13:14:46 2013   End:  Fri May 10 13:14:47 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XI.509.1 hypothetical protein (500 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	531
PF05708	158	DUF830: Orthopoxvirus protein of unknown function	99.36
PRK11479	274	hypothetical protein; Provisional	99.15
PRK10030	197	hypothetical protein; Provisional	99.05
PRK11470	200	hypothetical protein; Provisional	98.73
PF05382	145	Amidase_5: Bacteriophage peptidoglycan hydrolase ;	86.54
PF05257	124	CHAP: CHAP domain; InterPro: IPR007921 The CHAP (c	84.32
TIGR02219	134	phage_NlpC_fam putative phage cell wall peptidase,	83.97

>PF05708 DUF830: Orthopoxvirus protein of unknown function (DUF830); PDB: 2IF6_B 3KW0_C

Probab=99.36  E-value=2.1e-12  Score=114.36  Aligned_cols=101  Identities=23%  Similarity=0.360  Sum_probs=74.4

Q ss_pred             cCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccCCCC
Q 009605          224 EIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDS  303 (531)
Q Consensus       224 dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~kd~a  303 (531)
                      .+|+||+|...   |. +.++..++-+|++..||++|++.+.+++.+|+|+..     .++|++.++++|.+      . 
T Consensus         1 ~l~~GDIil~~---~~-~~~s~~i~~~t~~~~~HvgI~~~~~~~~~~viea~~-----~~Gv~~~~l~~~~~------~-   64 (158)
T PF05708_consen    1 KLQTGDIILTR---GK-SSLSKAIRPVTSSPYSHVGIVIGDEGQEPYVIEATP-----GDGVRLEPLSDFLK------R-   64 (158)
T ss_dssp             ---TT-EEEEE---E--SCCHHHHHHHHTSS--EEEEEEEETTE-EEEEEEET-----TTCEEEEECHHHHH------C-
T ss_pred             CCCCeeEEEEE---CC-chHHHHHHHHhCCCCCEEEEEEecCCCceEEEEecc-----CCCeEEeeHHHHhc------C-
Confidence            36899999998   66 889999999999999999999998777899999942     12799999999977      1 


Q ss_pred             CCceEEeeCChhHHhhcchhHHHHHHHHhcCCcccccc
Q 009605          304 NPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYHN  341 (531)
Q Consensus       304 ~~~va~LPL~~e~RakFN~tAAwef~~~~eG~PYGyhN  341 (531)
                      +-+++++.+.+. +..=...+|.+|++++-|+||++..
T Consensus        65 ~~~~~V~r~~~~-~~~~~~~~~~~~a~~~~g~~Y~~~~  101 (158)
T PF05708_consen   65 NEKIAVYRLKDP-LSEEQRQKAAEFAKSYIGKPYDFNF  101 (158)
T ss_dssp             CCEEEEEEECCG-TTCHHHHHHHHHHHCCTTS-B-CC-
T ss_pred             CceEEEEEECCC-CCHHHHHHHHHHHHHHcCCCccccc
Confidence            557999988887 2222455688899999999999753

>PRK11479 hypothetical protein; Provisional

Probab=99.15  E-value=2.1e-10  Score=115.00  Aligned_cols=179  Identities=20%  Similarity=0.231  Sum_probs=117.0

Q ss_pred             ccCCcccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhh
Q 009605          218 TNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFE  297 (531)
Q Consensus       218 ~~i~~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~  297 (531)
                      ..|+.+++|+||+|.++   |. +.++..|++.|+|...|++|.+-|  |  .++|+..      .+|++.+.++|... 
T Consensus        58 ~~Vs~~~LqpGDLVFfs---t~-t~~S~~Ik~~T~s~~SHVgIylGd--g--~vIEA~g------~GVri~pL~~~~~~-  122 (274)
T PRK11479         58 KEITAPDLKPGDLLFSS---SL-GVTSFGIRVFSTSSVSHVAIYLGE--N--NVAEATG------AGVQIVSLKKAIKH-  122 (274)
T ss_pred             cccChhhCCCCCEEEEe---cC-CccccceecccCCCCcEEEEEecC--C--eEEEcCC------CCEEEEechhhhcc-
Confidence            36888999999999998   44 678999999999999999999863  4  3799832      36999999999762 


Q ss_pred             ccCCCCCCceEEe---eCChhHHhhcchhHHHHHHHHhcCCcccccceeeeeeecCCCCCCCCcchhhHHHHhhhhhc-c
Q 009605          298 VNKDDSNPHIALL---PLHPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNH-I  373 (531)
Q Consensus       298 ~~kd~a~~~va~L---PL~~e~RakFN~tAAwef~~~~eG~PYGyhN~iFsWIDT~~dNyPppLd~~~v~~v~s~~~~-~  373 (531)
                            +-.|..+   .|.+|.+++     +.+|+.+..|+||.|.+.+.=.                    =-|+++ +
T Consensus       123 ------~~~I~a~Rv~~lt~e~~~k-----l~~fa~~~lGy~YN~~gI~~i~--------------------~y~~~~~~  171 (274)
T PRK11479        123 ------SDKLFALRVPDLTPQQATK-----ITAFANKIKDSGYNYRGIVEFI--------------------PFMVTRQM  171 (274)
T ss_pred             ------cceEEEEeCCCCCHHHHHH-----HHHHHHHhcCCCCCHHHHHHHH--------------------Hhhhhhhh
Confidence                  2347777   555555554     8899999999999988743110                    000000 0


Q ss_pred             --chHHHHHHHHHHHhhhcCCCCCChhHHHHHHhhcCCChhhccCcccCCcccccCCCcchHHHHHHHHHHHcCCCCCCC
Q 009605          374 --QPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIG  451 (531)
Q Consensus       374 --~P~~a~~mwneALNKRLgT~gL~l~~il~ea~krg~sf~~LlaiPEqD~W~Y~DG~S~~CsafV~~myKaAGlFg~l~  451 (531)
                        .|-+     .+.+=+|+      |..+...  .-|.- .+            .|..+++||.||+++|+++|+--  .
T Consensus       172 ~~~p~~-----~~~~r~~~------~~~la~i--~lg~~-~~------------~~~~~~fCSqfVaeaf~~aG~pi--~  223 (274)
T PRK11479        172 CSLNPF-----SEDFRQQC------VSGLAKA--QLGSV-GE------------GDKKSWFCSEFVTEAFAKAGHPL--T  223 (274)
T ss_pred             ccCCCC-----cHHHHHHH------HHhhhhh--hhccc-cc------------CCCCcEEHHHHHHHHHHHcCCcc--c
Confidence              0000     01111111      1100000  01110 11            46789999999999999999843  2


Q ss_pred             Cceeecccccccceeeeecc
Q 009605          452 SSIQVTEFTIKDAYSLRFFE  471 (531)
Q Consensus       452 ~sIn~tEFTpkD~Y~l~iFe  471 (531)
                       .-+..-.||.|++.++==|
T Consensus       224 -~~~~~~v~P~Dl~~ir~~~  242 (274)
T PRK11479        224 -LAQSGWISPADLLHMREGD  242 (274)
T ss_pred             -cCCcCccCHHHHHhcccCC
Confidence             3455666999999887443

>PRK10030 hypothetical protein; Provisional

Probab=99.05  E-value=1.5e-09  Score=103.36  Aligned_cols=99  Identities=17%  Similarity=0.243  Sum_probs=80.5

Q ss_pred             ccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccCCC
Q 009605          223 EEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDD  302 (531)
Q Consensus       223 ~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~kd~  302 (531)
                      .++|+||+|-.+   |+ +..+..|+.+|+|.-.|++|..+. +|+.+|+|+.       .+|+.+|+++|.+-     .
T Consensus        19 ~~l~~GDlif~~---g~-~~~s~aI~~~T~s~~SHVGIi~~~-~~~~~ViEAv-------~~V~~~pL~~Fl~~-----~   81 (197)
T PRK10030         19 WQPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMIVKR-NKKPYVFEAV-------GPVKYTPLKQWIAH-----G   81 (197)
T ss_pred             cCCCCCCEEEEe---CC-CcHhHHHhHhhCCCCceEEEEEEE-CCcEEEEEec-------CceEEEEHHHHhhc-----C
Confidence            388999999988   66 678999999999999999999984 7899999994       24999999999773     3


Q ss_pred             CCCceEEeeCChhHHhhcchhHHHHHHHHhcCCcccc
Q 009605          303 SNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGY  339 (531)
Q Consensus       303 a~~~va~LPL~~e~RakFN~tAAwef~~~~eG~PYGy  339 (531)
                      .+.++++..++..+... ...++.+|+.++-|+||++
T Consensus        82 ~~~~~~V~Rl~~~lt~~-~~~~li~~A~~~lGkpYD~  117 (197)
T PRK10030         82 EKGKYVVRRLENGLSVE-QQQKLAQTAKRYLGKPYDF  117 (197)
T ss_pred             ccCcEEEEEeCCCCCHH-HHHHHHHHHHHHcCCCCCc
Confidence            35688988877643332 1445788999999999984

>PRK11470 hypothetical protein; Provisional

Probab=98.73  E-value=1.1e-07  Score=91.97  Aligned_cols=102  Identities=16%  Similarity=0.176  Sum_probs=79.4

Q ss_pred             cccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccCC
Q 009605          222 VEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKD  301 (531)
Q Consensus       222 ~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~kd  301 (531)
                      +.++|+||+|-++-  |. ..+ .-|+.+|||-..|++|+.+-..++.+|+||..      .+++++|+++|++-     
T Consensus         6 ~~~l~~GDLvF~~~--~~-~~~-~aI~~aT~s~~sHvGII~~~~~~~~~VlEA~~------~~vr~TpLs~fi~r-----   70 (200)
T PRK11470          6 PAEYEIGDIVFTCI--GA-ALF-GQISAASNCWSNHVGIIIGHNGEDFLVAESRV------PLSTVTTLSRFIKR-----   70 (200)
T ss_pred             cCCCCCCCEEEEeC--Cc-chh-HHHHhccCCccceEEEEEEEcCCceEEEEecC------CceEEeEHHHHHhc-----
Confidence            46899999998872  22 333 45888999999999999954356889999953      23899999999874     


Q ss_pred             CCCCceEEeeCChhHHhhcchhHHHHHHHHhcCCcccc
Q 009605          302 DSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGY  339 (531)
Q Consensus       302 ~a~~~va~LPL~~e~RakFN~tAAwef~~~~eG~PYGy  339 (531)
                      ..+..+++-.|+..+++. =..+|.+++.++-|+||++
T Consensus        71 ~~~g~i~v~Rl~~~l~~~-~~~~~~~~A~~~lGkpYD~  107 (200)
T PRK11470         71 SANQRYAIKRLDAGLTEQ-QKQRIVEQVPSRLRKLYHT  107 (200)
T ss_pred             CcCceEEEEEecCCCCHH-HHHHHHHHHHHHcCCCCCC
Confidence            457889999997655542 1455899999999999994

>PF05382 Amidase_5: Bacteriophage peptidoglycan hydrolase ; InterPro: IPR008044 This entry is represented by Bacteriophage SFi21, lysin (Cell wall hydrolase; 3

Probab=86.54  E-value=2.1  Score=40.39  Aligned_cols=54  Identities=22%  Similarity=0.463  Sum_probs=38.8

Q ss_pred             ccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhh
Q 009605          223 EEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDF  296 (531)
Q Consensus       223 ~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~  296 (531)
                      .++|.||++..++- |.           ++...|||+|+|..  +.  +|.-.   | +..+|.++..+..|.+
T Consensus        74 ~~~q~GDI~I~g~~-g~-----------S~G~~GHtgif~~~--~~--iIhc~---y-~~~g~~~~~~~~~~~~  127 (145)
T PF05382_consen   74 WNLQRGDIFIWGRR-GN-----------SAGAGGHTGIFMDN--DT--IIHCN---Y-GANGIAINNYDWYWYY  127 (145)
T ss_pred             ccccCCCEEEEcCC-CC-----------CCCCCCeEEEEeCC--Cc--EEEec---C-CCCCeEecCCCeeeec
Confidence            37899999997733 33           55678999999842  22  33332   3 8889999998888775

5.1.28 from EC). At least one of proteins in this entry, the Pal protein from the pneumococcal bacteriophage Dp-1 (O03979 from SWISSPROT) has been shown to be an N-acetylmuramoyl-L-alanine amidase []. According to the known modular structure of this and other peptidoglycan hydrolases from the pneumococcal system, the active site should reside within this domain while a C-terminal domain binds to the choline residues of the cell wall teichoic acids [, ].

>PF05257 CHAP: CHAP domain; InterPro: IPR007921 The CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain is a region between 110 and 140 amino acids that is found in proteins from bacteria, bacteriophages, archaea and eukaryotes of the Trypanosomidae family

Probab=84.32  E-value=2.6  Score=36.65  Aligned_cols=43  Identities=23%  Similarity=0.200  Sum_probs=32.0

Q ss_pred             CcccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEc-CCCcEEEEEcCCC
Q 009605          221 TVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRD-SEGKLWVGESGHE  277 (531)
Q Consensus       221 ~~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd-~dG~L~v~ES~~~  277 (531)
                      .....++||++.+.              ..++...||+||+... .+|.+.++|....
T Consensus        59 ~~~~P~~Gdivv~~--------------~~~~~~~GHVaIV~~v~~~~~i~v~e~N~~  102 (124)
T PF05257_consen   59 TGSTPQPGDIVVWD--------------SGSGGGYGHVAIVESVNDGGTITVIEQNWG  102 (124)
T ss_dssp             ECS---TTEEEEEE--------------ECTTTTT-EEEEEEEE-TTSEEEEEECSST
T ss_pred             cCcccccceEEEec--------------cCCCCCCCeEEEEEEECCCCEEEEEECCcC
Confidence            45677899999885              2457789999999997 6799999999864

Many of these proteins are uncharacterised, but it has been proposed that they may function mainly in peptidoglycan hydrolysis. The CHAP domain is found in a wide range of protein architectures; it is commonly associated with bacterial type SH3 domains and with several families of amidase domains. It has been suggested that CHAP domain containing proteins utilise a catalytic cysteine residue in a nucleophilic-attack mechanism [, ]. The CHAP domain contains two invariant residues, a cysteine and a histidine. These residues form part of the putative active site of CHAP domain containing proteins. Secondary structure predictions show that the CHAP domain belongs to the alpha + beta structural class, with the N-terminal half largely containing predicted alpha helices and the C-terminal half principally composed of predicted beta strands [, ]. Some proteins known to contain a CHAP domain are listed below: Bacterial and trypanosomal glutathionylspermidine amidases. A variety of bacterial autolysins. A Nocardia aerocolonigenes putative esterase. Streptococcus pneumoniae choline-binding protein D. Methanosarcina mazei protein MM2478, a putative chloride channel. Several phage-encoded peptidoglycan hydrolases. Cysteine peptidases belonging to MEROPS peptidase family C51 (D-alanyl-glycyl endopeptidase, clan CA). ; PDB: 2LRJ_A 2VPM_B 2VOB_B 2VPS_A 2K3A_A 2IO9_A 2IO8_A 2IOB_A 2IOA_B 2IO7_B ....

>TIGR02219 phage_NlpC_fam putative phage cell wall peptidase, NlpC/P60 family

Probab=83.97  E-value=1.2  Score=40.30  Aligned_cols=54  Identities=22%  Similarity=0.387  Sum_probs=34.8

Q ss_pred             cCCcccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhh
Q 009605          219 NVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWD  295 (531)
Q Consensus       219 ~i~~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~  295 (531)
                      .++.+++|+||+|.+. .             ..|..++|++|.+ + +|++  |-+..    + .++.+...+.||.
T Consensus        71 ~v~~~~~qpGDlvff~-~-------------~~~~~~~HvGIy~-G-~g~~--iHa~~----~-~~v~~~~~~~yw~  124 (134)
T TIGR02219        71 PVPCDAAQPGDVLVFR-W-------------RPGAAAKHAAIAA-S-PTRF--IHAYD----G-AAVVESALVPWWR  124 (134)
T ss_pred             ccchhcCCCCCEEEEe-e-------------CCCCCCcEEEEEe-C-CCcE--EEECC----C-CCEEEeCCcHHHH
Confidence            5677899999999875 2             2355689999888 2 5664  44322    1 1344555667775

Members of this family show sequence similarity to members of the NlpC/P60 family described by Pfam model pfam00877 and by Anantharaman and Aravind (PubMed:12620121). The NlpC/P60 family includes a number of characterized bacterial cell wall hydrolases. Members of this related family are all found in prophage regions of bacterial genomes.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	531
3kw0_A	214	Cysteine peptidase; structural genomics, joint cen	99.42
2if6_A	186	Hypothetical protein YIIX; structural genomics, me	99.28
4h4j_A	240	Hypothetical protein; PF07313 family protein, DUF	89.26

>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus}

Probab=99.42  E-value=9.9e-13  Score=124.22  Aligned_cols=161  Identities=17%  Similarity=0.160  Sum_probs=115.5

Q ss_pred             cccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhc-cC
Q 009605          222 VEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEV-NK  300 (531)
Q Consensus       222 ~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~-~k  300 (531)
                      ++++++||+|.+.   |+ +.++.+|+++|+|..+|++|++.+ +++++|+|+..     ..||++.++++|.+-.. ..
T Consensus        37 ~~~l~~GDlif~~---~~-~~~s~~I~~~T~s~~sHvgI~~~~-~~~~~vieA~~-----~~GV~~~~L~~fl~~~~~~~  106 (214)
T 3kw0_A           37 INVLKTGDIFLCS---GN-YLVSKLIKKVSESMFSHTGIIVKW-GEHTLIMESVE-----DDGVRIVPLEHYIKNYENSN  106 (214)
T ss_dssp             TTTCCTTCEEEEE---EC-SHHHHHHHHHTTSSCCEEEEEEEE-TTEEEEEEEET-----TTEEEEEETHHHHHCGGGSS
T ss_pred             HhhCCCCCEEEEe---CC-CcHHHHHHHhcCCCCcEEEEEEec-CCceEEEEecC-----CCCEEEecHHHHHHHhhccc
Confidence            5799999999997   77 889999999999999999999986 68999999964     36799999999986321 01


Q ss_pred             CCCCCceEEeeC--------ChhHHhhcchhHHHHHHHHhcCCcccccceeeeeeecCCCCCCCCcchhhHHHHhhhhhc
Q 009605          301 DDSNPHIALLPL--------HPDMRAKFNETAAWEYALSMDGKPYGYHNMIFSWIDTRSGNYPPPLDAHLVASGMTMWNH  372 (531)
Q Consensus       301 d~a~~~va~LPL--------~~e~RakFN~tAAwef~~~~eG~PYGyhN~iFsWIDT~~dNyPppLd~~~v~~v~s~~~~  372 (531)
                      +.++..|++..|        .++.+     .++.+|+.++.|+||++.+++.                        +.  
T Consensus       107 ~~y~~~i~V~Rl~~~~~v~lt~~~~-----~~l~~~a~~~lGkpYd~~~~~~------------------------l~--  155 (214)
T 3kw0_A          107 NRYNGSLFIARHELLQNVNDDSEMI-----RNLIKVGFSLLNSGYDKNEIAQ------------------------IV--  155 (214)
T ss_dssp             SCCSEEEEEEEEGGGTTSCTTSHHH-----HHHHHHHHHHCCSCCCHHHHHH------------------------HH--
T ss_pred             ccccCceEEEEeccccccCCCHHHH-----HHHHHHHHHhcCCCCCcHHHHH------------------------HH--
Confidence            234456888755        44444     4589999999999999765210                        00  


Q ss_pred             cchHHHHHHHHHHHhhhcCCCCCChhHHHHHHhhcCCChhhccCcccCCcccccCCCcchHHHHHHHHHHHcCCCCCCCC
Q 009605          373 IQPAYAANMWNEALNKRLGTEGLDLPDILVETERRGTPFDELLTIPEQDDWIYSDGKSTSCVAFVLEMYKEAGLFDPIGS  452 (531)
Q Consensus       373 ~~P~~a~~mwneALNKRLgT~gL~l~~il~ea~krg~sf~~LlaiPEqD~W~Y~DG~S~~CsafV~~myKaAGlFg~l~~  452 (531)
                                     .|.          +     .|..+             -.+...+.||.||+++|+++|+--.   
T Consensus       156 ---------------~r~----------~-----~~~~~-------------~~~~~~~~CSelv~~a~~~~g~~~~---  189 (214)
T 3kw0_A          156 ---------------ARI----------G-----LGIGR-------------HEDNNEYICSEFVNECFKKIGVEFL---  189 (214)
T ss_dssp             ---------------HHH----------H-----HTCCC-------------CSSCCCCCHHHHHHHHHHTTTCCCC---
T ss_pred             ---------------Hhh----------h-----hcccc-------------cCCCCcEEeHHHHHHHHHHcCCCcc---
Confidence                           010          0     12221             1367889999999999999998542   


Q ss_pred             ceeecccccccceeeee
Q 009605          453 SIQVTEFTIKDAYSLRF  469 (531)
Q Consensus       453 sIn~tEFTpkD~Y~l~i  469 (531)
                      .-+..-+||.|..+-.-
T Consensus       190 ~~~~~~v~P~dl~~s~~  206 (214)
T 3kw0_A          190 TDSEGFIFPEHIAADHH  206 (214)
T ss_dssp             -----CCCHHHHHHCTT
T ss_pred             CCCCCEEecHHHhCCCC
Confidence            22566799999875443

>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21

Probab=99.28  E-value=1.5e-11  Score=112.17  Aligned_cols=101  Identities=16%  Similarity=0.219  Sum_probs=80.3

Q ss_pred             CcccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccC
Q 009605          221 TVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNK  300 (531)
Q Consensus       221 ~~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~k  300 (531)
                      +++++|+||+|.+.   |+ +.++.+|+.+|++..+|++|.+.+ +|+.+|+|+..       +|++.++++|.+.    
T Consensus         1 ~~~~l~~GDlvf~~---~~-~~~s~~I~~~t~~~~sHvgI~~~~-~~~~~viea~~-------gV~~~~l~~f~~~----   64 (186)
T 2if6_A            1 SLWQPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMLVMR-NKKPYVFEAVG-------PVKYTPLKQWIAH----   64 (186)
T ss_dssp             --CCCCTTCEEEEC---CC-STTHHHHHHHHTSSCCEEEEEEEE-TTEEEEEEESS-------SEEEEEHHHHHHT----
T ss_pred             CcccCCCCCEEEEE---cC-CchHHHHHHHcCCCCceEEEEEEe-CCcEEEEEeCC-------CeEEEEHHHHHhh----
Confidence            46789999999886   66 788999999999999999999975 68899999972       5999999999773    


Q ss_pred             CCCCCceEEeeCChhHHhhcchhHHHHHHHHhcCCcccc
Q 009605          301 DDSNPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGY  339 (531)
Q Consensus       301 d~a~~~va~LPL~~e~RakFN~tAAwef~~~~eG~PYGy  339 (531)
                       ..+-++++.+|+.++.+. ...++.+++.++.|+||+|
T Consensus        65 -~~~~~~~v~Rl~~~ls~~-~~~~~~~~a~~~~G~pY~~  101 (186)
T 2if6_A           65 -GEKGKYVVRRVEGGLSVE-QQQKLAQTAKRYLGKPYDF  101 (186)
T ss_dssp             -SGGGCEEEEEETTCCCHH-HHHHHHHHHGGGTTCCBCT
T ss_pred             -ccCCcEEEEEeCCCCCHH-HHHHHHHHHHHHcCCcCCc
Confidence             123478999887533222 2456888999999999997

>4h4j_A Hypothetical protein; PF07313 family protein, DUF 1460, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.15A {Bacteroides uniformis}

Probab=89.26  E-value=0.5  Score=46.03  Aligned_cols=72  Identities=15%  Similarity=0.307  Sum_probs=53.1

Q ss_pred             cccCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccCC
Q 009605          222 VEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKD  301 (531)
Q Consensus       222 ~~dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~kd  301 (531)
                      .+.||+||+|+|..=             ..|--+.|+++++|. +|+++......  ..++-.|...|+.|+.+.    .
T Consensus       168 ~~~l~~GDiIai~t~-------------~~GLDvsH~Giai~~-~~~l~l~hASS--~~~~vvv~d~pl~~Yl~~----~  227 (240)
T 4h4j_A          168 LPWIKDGDIIAITTN-------------TPGLDVAHMGIAFYA-DNKLLLVHASS--TDKKVVVSKVPLSQMLKD----N  227 (240)
T ss_dssp             CTTSCTTCEEEEEEC-------------STTCSEEEEEEEEEE-TTEEEEEEEET--TTTEEEECSSCHHHHHHH----C
T ss_pred             HhhCCCCcEEEEEec-------------CCCceEEEEEEEEEE-CCeEEEEEcCC--CCCceEEcCccHHHHHhh----C
Confidence            467999999999832             257788999999995 88899988665  445566667899999872    2


Q ss_pred             CCCCceEEeeCC
Q 009605          302 DSNPHIALLPLH  313 (531)
Q Consensus       302 ~a~~~va~LPL~  313 (531)
                      .+.+-|.++.++
T Consensus       228 ~~~~GI~V~R~k  239 (240)
T 4h4j_A          228 NKWTGIRVLRMK  239 (240)
T ss_dssp             TTEEEEEEEEEC
T ss_pred             CCCCCeEEEEeC
Confidence            344557666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	531
d2if6a1	182	Hypothetical protein YiiX {Escherichia coli [TaxId	99.36

>d2if6a1 d.3.1.21 (A:19-200) Hypothetical protein YiiX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: YiiX-like
domain: Hypothetical protein YiiX
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=1.4e-12  Score=115.21  Aligned_cols=99  Identities=16%  Similarity=0.226  Sum_probs=81.3

Q ss_pred             cCCCCCEEEEeeecccCCchhhHHHhhcCcCcceeEEEEEcCCCcEEEEEcCCCCcCccceeeecchhhhhhhhccCCCC
Q 009605          224 EIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEGQDIIAILPWDEWWDFEVNKDDS  303 (531)
Q Consensus       224 dI~sGDflaiskirGr~~Gf~~l~kw~tGs~aGHtav~Lrd~dG~L~v~ES~~~~~~g~~~I~~~~w~eW~~~~~~kd~a  303 (531)
                      ++|+||+|.++   |+ +.++..|+++|+|..+|.+|++.. +|+.+|+|+..       +|+..+.++|...     ..
T Consensus         2 q~q~GDIlf~~---~~-s~~s~aI~~~T~s~~sHvgIv~~~-~~~~~v~~a~~-------~V~~~~l~~f~~~-----~~   64 (182)
T d2if6a1           2 QPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMLVMR-NKKPYVFEAVG-------PVKYTPLKQWIAH-----GE   64 (182)
T ss_dssp             CCCTTCEEEEC---CC-STTHHHHHHHHTSSCCEEEEEEEE-TTEEEEEEESS-------SEEEEEHHHHHHT-----SG
T ss_pred             CCCCccEEEEe---CC-CcHHHHHHHHhCCCCceEEEEEEe-CCeEEEEeecc-------cEEEeechHhhhh-----cC
Confidence            57999999986   77 889999999999999999999974 78999999853       5999999999874     33


Q ss_pred             CCceEEeeCChhHHhhcchhHHHHHHHHhcCCccccc
Q 009605          304 NPHIALLPLHPDMRAKFNETAAWEYALSMDGKPYGYH  340 (531)
Q Consensus       304 ~~~va~LPL~~e~RakFN~tAAwef~~~~eG~PYGyh  340 (531)
                      +.++++..+.+++.+. ...++.++++++.|+||+++
T Consensus        65 ~~~~~v~R~~~~~~~~-~~~~~~~~a~~~lGkpYd~~  100 (182)
T d2if6a1          65 KGKYVVRRVEGGLSVE-QQQKLAQTAKRYLGKPYDFS  100 (182)
T ss_dssp             GGCEEEEEETTCCCHH-HHHHHHHHHGGGTTCCBCTT
T ss_pred             CCCEEEEEecCCCCHH-HHHHHHHHHHHhcCCCCccc
Confidence            4567888777666555 34567789999999999853