Citrus Sinensis ID: 009618
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SAK4 | 528 | Succinate-semialdehyde de | yes | no | 0.994 | 0.998 | 0.782 | 0.0 | |
| B9F3B6 | 527 | Succinate-semialdehyde de | yes | no | 0.971 | 0.977 | 0.762 | 0.0 | |
| P25526 | 482 | Succinate-semialdehyde de | N/A | no | 0.905 | 0.995 | 0.575 | 1e-168 | |
| P51650 | 523 | Succinate-semialdehyde de | yes | no | 0.894 | 0.906 | 0.579 | 1e-159 | |
| Q8BWF0 | 523 | Succinate-semialdehyde de | yes | no | 0.894 | 0.906 | 0.575 | 1e-157 | |
| Q3MSM3 | 535 | Succinate-semialdehyde de | N/A | no | 0.9 | 0.891 | 0.583 | 1e-153 | |
| Q6A2H2 | 535 | Succinate-semialdehyde de | N/A | no | 0.9 | 0.891 | 0.579 | 1e-152 | |
| P51649 | 535 | Succinate-semialdehyde de | yes | no | 0.9 | 0.891 | 0.579 | 1e-152 | |
| Q6A2H1 | 535 | Succinate-semialdehyde de | N/A | no | 0.9 | 0.891 | 0.579 | 1e-152 | |
| Q3MSM4 | 535 | Succinate-semialdehyde de | N/A | no | 0.9 | 0.891 | 0.579 | 1e-152 |
| >sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/529 (78%), Positives = 474/529 (89%), Gaps = 2/529 (0%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL 300
LQAG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKVSLEL
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLEL 298
Query: 301 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 360
GGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L
Sbjct: 299 GGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKL 358
Query: 361 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 420
+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+ +V
Sbjct: 359 EVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDV 418
Query: 421 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480
M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYG
Sbjct: 419 SDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYG 478
Query: 481 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 529
LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 479 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|B9F3B6|SSDH_ORYSJ Succinate-semialdehyde dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=ALDH5F1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/517 (76%), Positives = 454/517 (87%), Gaps = 2/517 (0%)
Query: 12 VGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKT 71
+G+R I A+ S S R MSV + +++R +GLLRTQGLIGGKW+DAYDGKT
Sbjct: 13 LGARHILAAS--STSSSGVLLRRHMSVDAGAAMEKVRAAGLLRTQGLIGGKWVDAYDGKT 70
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV NPATGE +ANVSCMG KET DAI+SA F SWSKLTA ERSK LRKW+DL+++HK
Sbjct: 71 IEVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISHK 130
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
EEL L+TLEQGKP+KEA+ EV YGA FIE++AEEAKR+YG+IIP TL DRRL VLKQPV
Sbjct: 131 EELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQPV 190
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV GA+TPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA+LALQAGIP G +N
Sbjct: 191 GVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAADLALQAGIPAGAIN 250
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311
VVMGNAP+IGDALL S QVRKITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDD
Sbjct: 251 VVMGNAPEIGDALLQSTQVRKITFTGSTAVGKKLMAGSANTVKKVSLELGGNAPCIVFDD 310
Query: 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371
AD++VA+ G+LAAKFRNSGQTCVCANR+LVQEGIYEKFA AF KAV++LKVG+G E
Sbjct: 311 ADIDVAIKGSLAAKFRNSGQTCVCANRILVQEGIYEKFASAFIKAVQSLKVGNGLEESTS 370
Query: 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 431
QGPLIN+AA++KVE F+ DA SKGA ++LGG+RHSLGM+FYEPTV+ NV ++ML+ REEV
Sbjct: 371 QGPLINEAAVQKVEKFINDATSKGANIMLGGKRHSLGMSFYEPTVVGNVSNDMLLFREEV 430
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPVAPL+ FKTEE+AI MANDTNAGLAAYIFT ++ R+WRVSEALEYGLVGVNEG+IST
Sbjct: 431 FGPVAPLVPFKTEEDAIRMANDTNAGLAAYIFTKSIPRSWRVSEALEYGLVGVNEGIIST 490
Query: 492 EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 528
EVAPFGGVKQSGLGREGSKYGMDE+LE+KY+C+G++N
Sbjct: 491 EVAPFGGVKQSGLGREGSKYGMDEYLELKYICMGNLN 527
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Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P25526|GABD_ECOLI Succinate-semialdehyde dehydrogenase [NADP(+)] GabD OS=Escherichia coli (strain K12) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 276/480 (57%), Positives = 364/480 (75%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+
Sbjct: 242 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 301
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 302 YDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 361
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY +
Sbjct: 362 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 421
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
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Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. It appears to be important for nitrogen metabolism under N limitation conditions. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
| >sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 561 bits (1446), Expect = e-159, Method: Compositional matrix adjust.
Identities = 278/480 (57%), Positives = 360/480 (75%), Gaps = 6/480 (1%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL 111
LLR +GG+W+ T V++PA+G + V+ G E + A+ +A+DAF+SW ++
Sbjct: 46 LLRGDSFVGGRWLPT--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEI 103
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
+ ERS LRKWYDL++ +K+EL ++IT E GKPLKEA GE+ Y A F+E+++EEA+RVY
Sbjct: 104 SVKERSSLLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVY 163
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 164 GDIIYTSAKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPY 223
Query: 232 TALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ALA A+LA QAGIPPGV NV+ A ++G+ L T P V KI+FTGSTA GK L+
Sbjct: 224 SALALAQLANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHH 283
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++
Sbjct: 284 AANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDS 343
Query: 349 FADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
F F++A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH
Sbjct: 344 FVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKHVNDAVAKGATVVTGGKRHQS 403
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
G F+EPT+LSNV +ML EE FGPVAP++ F EEEA+ +AN + GLA Y ++ +
Sbjct: 404 GGNFFEPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDP 463
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 527
+ WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 464 AQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 554 bits (1427), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/480 (57%), Positives = 358/480 (74%), Gaps = 6/480 (1%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL 111
LLR +GG+W+ A T V++PA+G + V+ G E + A+ +A+DAFNSW +
Sbjct: 46 LLRGDSFVGGRWLPA--PATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFNSWKGV 103
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
+ ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R+Y
Sbjct: 104 SVKERSLLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIY 163
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+II + D+R VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E TP
Sbjct: 164 GDIIYTSAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPY 223
Query: 232 TALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ALA A+LA QAGIP GV NV+ A ++G+ L T P V KI+FTGSTA GK L+
Sbjct: 224 SALALAQLANQAGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHH 283
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+NR LVQ GI++
Sbjct: 284 AANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDS 343
Query: 349 FADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
F F++A+ K+L+VG+GF EG QGPLIN+ A+EKVE V DAV+KGA V+ GG+RH
Sbjct: 344 FVTKFAEAMKKSLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVAKGATVVTGGKRHQS 403
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
G F+EPT+LSNV +ML EE FGP+AP++ F EEEA+ +AN GLA Y ++ +
Sbjct: 404 GGNFFEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDP 463
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 527
+ WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G +
Sbjct: 464 AQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 282/483 (58%), Positives = 364/483 (75%), Gaps = 6/483 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ AA +VK+VS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ GI
Sbjct: 293 LHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGI 352
Query: 346 YEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
++ F AF++A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+R
Sbjct: 353 HDAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKR 412
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
H LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 413 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 472
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 473 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 532
Query: 525 GDM 527
G +
Sbjct: 533 GGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Hylobates lar (taxid: 9580) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H2|SSDH_PONPY Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 539 bits (1388), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/483 (57%), Positives = 364/483 (75%), Gaps = 6/483 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI
Sbjct: 293 LHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 352
Query: 346 YEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+R
Sbjct: 353 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKR 412
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
H LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 413 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYS 472
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 473 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 532
Query: 525 GDM 527
G +
Sbjct: 533 GGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pongo pygmaeus (taxid: 9600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/483 (57%), Positives = 364/483 (75%), Gaps = 6/483 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI
Sbjct: 293 LHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 352
Query: 346 YEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+R
Sbjct: 353 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 412
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
H LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 413 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 472
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 473 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 532
Query: 525 GDM 527
G +
Sbjct: 533 GGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/483 (57%), Positives = 364/483 (75%), Gaps = 6/483 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI
Sbjct: 293 LHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 352
Query: 346 YEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+R
Sbjct: 353 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 412
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
H LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 413 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 472
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 473 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 532
Query: 525 GDM 527
G +
Sbjct: 533 GGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Gorilla gorilla gorilla (taxid: 9595) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/483 (57%), Positives = 364/483 (75%), Gaps = 6/483 (1%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW 108
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 55 SAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCCW 112
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+
Sbjct: 113 REVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEAR 172
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E
Sbjct: 173 RVYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAED 232
Query: 229 TPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L
Sbjct: 233 TPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKIL 292
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI
Sbjct: 293 LHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 352
Query: 346 YEKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
++ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+R
Sbjct: 353 HDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKR 412
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
H LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 413 HQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYS 472
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 473 QDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCY 532
Query: 525 GDM 527
G +
Sbjct: 533 GGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan paniscus (taxid: 9597) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| 449444298 | 541 | PREDICTED: succinate-semialdehyde dehydr | 0.937 | 0.918 | 0.820 | 0.0 | |
| 356555230 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.952 | 0.940 | 0.803 | 0.0 | |
| 350538647 | 522 | succinic semialdehyde dehydrogenase [Sol | 0.933 | 0.948 | 0.816 | 0.0 | |
| 356528645 | 537 | PREDICTED: succinate-semialdehyde dehydr | 0.954 | 0.942 | 0.792 | 0.0 | |
| 255577875 | 607 | succinate semialdehyde dehydrogenase, pu | 0.935 | 0.817 | 0.825 | 0.0 | |
| 224109088 | 536 | predicted protein [Populus trichocarpa] | 0.956 | 0.945 | 0.816 | 0.0 | |
| 15219379 | 528 | succinate-semialdehyde dehydrogenase [Ar | 0.994 | 0.998 | 0.782 | 0.0 | |
| 297842727 | 527 | ALDH5F1 [Arabidopsis lyrata subsp. lyrat | 0.992 | 0.998 | 0.778 | 0.0 | |
| 225462297 | 530 | PREDICTED: succinate-semialdehyde dehydr | 0.988 | 0.988 | 0.770 | 0.0 | |
| 297736107 | 525 | unnamed protein product [Vitis vinifera] | 0.937 | 0.946 | 0.806 | 0.0 |
| >gi|449444298|ref|XP_004139912.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/497 (82%), Positives = 459/497 (92%)
Query: 34 RQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE 93
RQMS +S+T RL SGLLR+QGLIGGKWIDAYDGKTL+V NPA GEVI NV MG +E
Sbjct: 45 RQMSSEAQSITTRLHSSGLLRSQGLIGGKWIDAYDGKTLKVQNPANGEVITNVPLMGKRE 104
Query: 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153
T DAISSA+DAF SWSKLTAA+RS LRKWY+LLMAHKEELGQLITLEQGKPLKEA+GE
Sbjct: 105 TDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLMAHKEELGQLITLEQGKPLKEALGET 164
Query: 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213
+YGA FIEF++EEAKRVYG+II T+ DRRL VLKQPVGV G ITPWNFPLAMITRKVGP
Sbjct: 165 NYGASFIEFFSEEAKRVYGDIISPTIADRRLLVLKQPVGVVGIITPWNFPLAMITRKVGP 224
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
ALA GCTVV+KPSE TPLTALAAAEL+LQAGIPPGVVNVVMG+AP IGDA+L S QVRKI
Sbjct: 225 ALASGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKI 284
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 333
TFTGSTAVGKKLMAGAAGTVK+VS ELGGNAPCI+FDDAD++VAV G++AAKFRNSGQTC
Sbjct: 285 TFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIIFDDADVDVAVKGSIAAKFRNSGQTC 344
Query: 334 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393
VCANR+LVQEGIYEKF +AFSKAV+NL+VGDGFGEGV QGPLIN+AA++KVE F++DA +
Sbjct: 345 VCANRILVQEGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATT 404
Query: 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453
KGAKVLLGG+RHSLGMTF+EPTV++ VKS+ML+SREEVFGPVAPLL F+TEEEAI +AND
Sbjct: 405 KGAKVLLGGKRHSLGMTFFEPTVVAGVKSDMLLSREEVFGPVAPLLPFRTEEEAIALAND 464
Query: 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 513
TNAGLAAYIFTNN+QR+WRV+EALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSKYGM
Sbjct: 465 TNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 524
Query: 514 DEFLEIKYVCLGDMNRK 530
DE+LE+KYVCLG+M+R+
Sbjct: 525 DEYLELKYVCLGNMDRQ 541
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555230|ref|XP_003545937.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/505 (80%), Positives = 459/505 (90%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA 84
MQ +P +R+MS+ +SV +L SGLLRTQGLIGGKW DAYDGKT++V+NPATGE I
Sbjct: 32 MQPSSPPLTRKMSMDAQSVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESIV 91
Query: 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 144
+V+CMGG+ET DAIS+A+DA+ SWSK TAAERSK LRKWYDLLM HKEEL QLITLEQGK
Sbjct: 92 DVACMGGRETNDAISAAYDAYGSWSKTTAAERSKFLRKWYDLLMVHKEELAQLITLEQGK 151
Query: 145 PLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 204
PLKE+VGE++YGA FIEF AEEAKR+YG+IIPA L DRRLFVLKQPVGV GAITPWNFPL
Sbjct: 152 PLKESVGEINYGAGFIEFAAEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPL 211
Query: 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
AMITRKVGPALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDAL
Sbjct: 212 AMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDAL 271
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324
L SPQVRKITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDDADL+VAV G LAA
Sbjct: 272 LASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAA 331
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384
KFRNSGQTCVCANR++VQEGIYEKFA+A V+N+KVGDGF EGV QGPLIN+AA++KV
Sbjct: 332 KFRNSGQTCVCANRIIVQEGIYEKFANALRDTVQNMKVGDGFSEGVAQGPLINEAAVKKV 391
Query: 385 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444
E+ + DA SKGAKV+LGG+RHSLG TFYEPTV+S+V S+M +SREE FGPVAPLL FKTE
Sbjct: 392 ESLIHDATSKGAKVILGGKRHSLGFTFYEPTVISDVNSDMRISREEAFGPVAPLLRFKTE 451
Query: 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL 504
E+AI +ANDTNAGL +YIFTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQSGL
Sbjct: 452 EDAIRIANDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGL 511
Query: 505 GREGSKYGMDEFLEIKYVCLGDMNR 529
GREGSKYGMDE+LEIKYVCLG+M++
Sbjct: 512 GREGSKYGMDEYLEIKYVCLGNMHK 536
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538647|ref|NP_001233841.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] gi|171854593|dbj|BAG16487.1| succinic semialdehyde dehydrogenase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/495 (81%), Positives = 456/495 (92%)
Query: 34 RQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE 93
R M+ +SV +L SGLLR+Q LIGGKW+DAYDGKT++VHNPATGEVI +V CMGG+E
Sbjct: 28 RLMTTDTQSVAAKLSSSGLLRSQALIGGKWVDAYDGKTIKVHNPATGEVITDVPCMGGRE 87
Query: 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153
T DAISSA+DAF+SWSKLTAAERS+ LRKWYDL+MAHKEELGQL+TLEQGKPLKEA+GEV
Sbjct: 88 TNDAISSAYDAFSSWSKLTAAERSRYLRKWYDLIMAHKEELGQLMTLEQGKPLKEAIGEV 147
Query: 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213
YGA FIEF AEE KR+YG+IIP+ L DRRLFVLKQPVGV GAITPWNFPLAMITRKVGP
Sbjct: 148 SYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVGAITPWNFPLAMITRKVGP 207
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
ALACGCTVV+KPSE TPLTALAAAEL++QAGIPPGVVNVVMGNAPDIGDALL SPQVRKI
Sbjct: 208 ALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMGNAPDIGDALLASPQVRKI 267
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 333
TFTGST VGKKLM GAA TVKKVSLELGGNAPCI+FDDADL VA+ GALA KFRN+GQTC
Sbjct: 268 TFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDADLEVALKGALATKFRNTGQTC 327
Query: 334 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393
VCANR+LVQEGIY+KFA+AF+KAV+N+KVGDGF EGV QGPLIN+AA++KVE FV++A S
Sbjct: 328 VCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPLINEAAVQKVEYFVDEATS 387
Query: 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453
KGAKVL+GG+RHSLGMTFYEPTV++ V SEML+++EEVFGPVAPLL FKT+EEAI MAND
Sbjct: 388 KGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPVAPLLKFKTDEEAIQMAND 447
Query: 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 513
TNAGLAAYIF+ N++R WRV+EALEYG+VGVNEGL+STEVAPFGGVKQSGLGREGSKYGM
Sbjct: 448 TNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAPFGGVKQSGLGREGSKYGM 507
Query: 514 DEFLEIKYVCLGDMN 528
DE+LE+KYVCLG M+
Sbjct: 508 DEYLEMKYVCLGSMS 522
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528645|ref|XP_003532910.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/506 (79%), Positives = 456/506 (90%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA 84
MQ +P +R+MS +S+ +L SGLLRTQGLI GKW DAYDGKT++V+NPATGE +
Sbjct: 32 MQPSSPPLTRKMSTDAQSIASQLNSSGLLRTQGLIAGKWSDAYDGKTIKVYNPATGESVV 91
Query: 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGK 144
+V+CMGG+ET DAIS+A+DA+ SWSK TAAERSK LRKWYDLLM HKEEL QLITLEQGK
Sbjct: 92 DVACMGGRETNDAISAAYDAYGSWSKTTAAERSKLLRKWYDLLMVHKEELAQLITLEQGK 151
Query: 145 PLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPL 204
PLKE+VGE+ YGA FIEF AEEAKR+YG+I+PA DRRLFVLKQPVGV GAITPWNFPL
Sbjct: 152 PLKESVGEIVYGAGFIEFAAEEAKRIYGDIVPAPFSDRRLFVLKQPVGVVGAITPWNFPL 211
Query: 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
AMITRKVGPALACGCTVV+KPSE TPLTALAA EL++QAGIPPGVVNVVMGNAPDIGDAL
Sbjct: 212 AMITRKVGPALACGCTVVIKPSELTPLTALAAVELSIQAGIPPGVVNVVMGNAPDIGDAL 271
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324
L SPQVRKITFTGSTAVGKKLMAG+A TVKKVSLELGGNAPCIVFDDADL+VAV G LAA
Sbjct: 272 LASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAA 331
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384
KFRNSGQTCVCANR++VQEGIYEKFA+A AV+N+KVGDGF EGV QGPLIN+AA++KV
Sbjct: 332 KFRNSGQTCVCANRIIVQEGIYEKFANALRDAVQNMKVGDGFSEGVSQGPLINEAAVKKV 391
Query: 385 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444
E+ + DA SKGAKV+LGG+RHSLG+TFYEPTV+S+V S+M +SREE FGPVAPLL FKTE
Sbjct: 392 ESLIHDATSKGAKVILGGKRHSLGLTFYEPTVISDVNSDMHISREEAFGPVAPLLRFKTE 451
Query: 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGL 504
EEAI +ANDTNAGL +Y+FTN++QR+WRV+EALEYGLVGVNEG+ISTEVAPFGG KQSGL
Sbjct: 452 EEAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGFKQSGL 511
Query: 505 GREGSKYGMDEFLEIKYVCLGDMNRK 530
GREGSKYGMDE+LEIKYVC G+MN++
Sbjct: 512 GREGSKYGMDEYLEIKYVCFGNMNKE 537
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255577875|ref|XP_002529810.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] gi|223530687|gb|EEF32559.1| succinate semialdehyde dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/503 (82%), Positives = 464/503 (92%), Gaps = 7/503 (1%)
Query: 31 AFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMG 90
AF+ ++ + +S+ RLR++GLLRTQGLIGGKW DAYDGKT++VHNPATGEVIA+V CMG
Sbjct: 105 AFTSEVCMKTESLAARLRNAGLLRTQGLIGGKWTDAYDGKTIQVHNPATGEVIADVPCMG 164
Query: 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150
G ETKDAISSA DAF SWSKLTA+ERSK LR+W+DLL+AHKEELGQLITLEQGKPLKEA+
Sbjct: 165 GNETKDAISSAHDAFQSWSKLTASERSKHLRRWFDLLIAHKEELGQLITLEQGKPLKEAI 224
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
GEV YGA FIEF+AEEAKRVYG+IIPATL DRRL VLKQPVGV GAITPWNFPLAMITRK
Sbjct: 225 GEVSYGASFIEFFAEEAKRVYGDIIPATLGDRRLLVLKQPVGVVGAITPWNFPLAMITRK 284
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
VGPALACGCTVVVKPSE TPLTALAAAELALQAGIPPGV+N+VMG APDIGDALL SPQV
Sbjct: 285 VGPALACGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNLVMGKAPDIGDALLASPQV 344
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
RKITFTGSTAVGKKLM GAA TVK+VSLELGGNAPCIVFDDADL+VAV G+LAAKFRNSG
Sbjct: 345 RKITFTGSTAVGKKLMEGAARTVKRVSLELGGNAPCIVFDDADLDVAVKGSLAAKFRNSG 404
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
QTCVCANR++VQEGIY+KFA+ FS+AV+NL+VGDGF EGV QGPLIN+AAL+KVE+FV+D
Sbjct: 405 QTCVCANRLIVQEGIYDKFAETFSRAVQNLQVGDGFTEGVAQGPLINEAALQKVESFVQD 464
Query: 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450
A+SKGAKVL+GG+RHSLG TFYEPTV+S+VKSEM+VSREEVFGPVAP+L FKTEEEAI +
Sbjct: 465 AISKGAKVLIGGKRHSLGRTFYEPTVISDVKSEMVVSREEVFGPVAPILRFKTEEEAISI 524
Query: 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 510
ANDTNAGLAAYIFTNN QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK
Sbjct: 525 ANDTNAGLAAYIFTNNTQRSWRVAEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 584
Query: 511 YGMDEFLEI-------KYVCLGD 526
YGMDE+LE+ ++C G+
Sbjct: 585 YGMDEYLEVSIVLTSFHFLCCGN 607
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109088|ref|XP_002315079.1| predicted protein [Populus trichocarpa] gi|222864119|gb|EEF01250.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/507 (81%), Positives = 464/507 (91%)
Query: 24 SMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVI 83
S +P SR MS+ +++ +L SGLL+TQGLI GKW+DA DG T++V NPATGEV+
Sbjct: 30 STNRTSPPLSRHMSMKSENLVSKLTSSGLLKTQGLIDGKWVDANDGDTIKVLNPATGEVV 89
Query: 84 ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG 143
A V CMG ET +AISSA+DAF SWSKLTA+ERS+ +RKWYDLL+AHKEELGQLITLEQG
Sbjct: 90 AIVPCMGQSETNNAISSAYDAFRSWSKLTASERSQRIRKWYDLLIAHKEELGQLITLEQG 149
Query: 144 KPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 203
KPLKEA+GEV YGA FIEFYAEEAKRVYG+IIPATL DRRLFVLKQPVGV GAITPWNFP
Sbjct: 150 KPLKEAMGEVSYGASFIEFYAEEAKRVYGDIIPATLGDRRLFVLKQPVGVVGAITPWNFP 209
Query: 204 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDA 263
LAMITRKVGPALACGCTVV+KPSE TPLTALAAAELALQAGIPPGV+NVVMG APDIGDA
Sbjct: 210 LAMITRKVGPALACGCTVVLKPSELTPLTALAAAELALQAGIPPGVLNVVMGKAPDIGDA 269
Query: 264 LLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALA 323
LL S +VRKITFTGSTAVGKKLMAGAAGTVK++SLELGGNAPCIVFDDADL+VAV G+LA
Sbjct: 270 LLASHEVRKITFTGSTAVGKKLMAGAAGTVKRLSLELGGNAPCIVFDDADLDVAVKGSLA 329
Query: 324 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 383
AKFRNSGQTCVCANR++VQEGIY+KFAD+FSKAV++++VGDGF EGV QGPLIN+AA++K
Sbjct: 330 AKFRNSGQTCVCANRIIVQEGIYDKFADSFSKAVQSMQVGDGFSEGVTQGPLINEAAVQK 389
Query: 384 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443
VE+FV+DA+ KGAKVLLGG+RHSLGM FYEPT++SNV ML+SREEVFGPVAPLL FKT
Sbjct: 390 VESFVQDAIFKGAKVLLGGKRHSLGMNFYEPTIISNVTEAMLLSREEVFGPVAPLLRFKT 449
Query: 444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSG 503
EEEAI MAN+T AGLAAYIFTNN+QR+WRV+EALEYGLVGVNEGLISTEVAPFGGVKQSG
Sbjct: 450 EEEAILMANNTKAGLAAYIFTNNVQRSWRVTEALEYGLVGVNEGLISTEVAPFGGVKQSG 509
Query: 504 LGREGSKYGMDEFLEIKYVCLGDMNRK 530
LGREGSKYGMDE+LE+KYVCLGDMNRK
Sbjct: 510 LGREGSKYGMDEYLEMKYVCLGDMNRK 536
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15219379|ref|NP_178062.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] gi|118575126|sp|Q9SAK4.2|SSDH_ARATH RecName: Full=Succinate-semialdehyde dehydrogenase, mitochondrial; Short=At-SSADH1; AltName: Full=Aldehyde dehydrogenase family 5 member F1; AltName: Full=NAD(+)-dependent succinic semialdehyde dehydrogenase; Flags: Precursor gi|6684442|gb|AAF23590.1|AF117335_1 succinic semialdehyde dehydrogenase [Arabidopsis thaliana] gi|16226915|gb|AAL16297.1|AF428367_1 At1g79440/T8K14_14 [Arabidopsis thaliana] gi|15810165|gb|AAL07226.1| putative succinic semialdehyde dehydrogenase gabD [Arabidopsis thaliana] gi|332198122|gb|AEE36243.1| succinate-semialdehyde dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/529 (78%), Positives = 474/529 (89%), Gaps = 2/529 (0%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL 300
LQAG+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKVSLEL
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLEL 298
Query: 301 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 360
GGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L
Sbjct: 299 GGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKL 358
Query: 361 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 420
+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+ +V
Sbjct: 359 EVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDV 418
Query: 421 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480
M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYG
Sbjct: 419 SDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYG 478
Query: 481 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 529
LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 479 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842727|ref|XP_002889245.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] gi|297335086|gb|EFH65504.1| ALDH5F1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/529 (77%), Positives = 472/529 (89%), Gaps = 3/529 (0%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + S + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLVSSHTSLLVS---SQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 57
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKWID+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 58 GKWIDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKIL 117
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 118 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 177
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240
DRRL VLKQPVGV GAI PWNFPLAMITRKVGPALA GCTVVVKPSE TPLTALAAAELA
Sbjct: 178 DRRLLVLKQPVGVVGAIAPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 237
Query: 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL 300
LQAG+PP +NVVMGNAP+IGDALL+S QVRKITFTGSTAVGKKLMA AA TVKKVSLEL
Sbjct: 238 LQAGVPPVALNVVMGNAPEIGDALLSSRQVRKITFTGSTAVGKKLMAAAAPTVKKVSLEL 297
Query: 301 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 360
GGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L
Sbjct: 298 GGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKL 357
Query: 361 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 420
+VGDGF EG QGPLIN AA++KV+TF +DAVSKGAK++LGG+RHSLG TFYEPTV+ +V
Sbjct: 358 EVGDGFKEGTTQGPLINDAAVQKVQTFQQDAVSKGAKIILGGKRHSLGSTFYEPTVIRDV 417
Query: 421 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480
++ML+S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYG
Sbjct: 418 SNDMLMSKEEIFGPVAPLIRFKTEEDAIRLANDTIAGLAAYIFTNSVQRSWRVFEALEYG 477
Query: 481 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 529
LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 478 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 526
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225462297|ref|XP_002265514.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/527 (77%), Positives = 467/527 (88%), Gaps = 3/527 (0%)
Query: 5 GVARVAFVGSRRIFASHLPSMQSY---TPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGG 61
G++++ + S H P S + +RQ+S+ +++ RL SGLLR+Q LIGG
Sbjct: 2 GISQMGLLRSSCSALCHGPRTASVLRPSAVLTRQISMDTQNLVARLNSSGLLRSQCLIGG 61
Query: 62 KWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLR 121
KW +AYDGKT+ VHNPATG+V+ NV CMGG+ET DAIS A++AF SWSKLTAAERSK LR
Sbjct: 62 KWTEAYDGKTIPVHNPATGDVLVNVPCMGGQETNDAISVAYEAFLSWSKLTAAERSKRLR 121
Query: 122 KWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD 181
KWYDLL+A+KEELGQ+ITLEQGKPLKEA+GEV+YGA FIEF AEEAKR+YG+IIP+ L D
Sbjct: 122 KWYDLLIANKEELGQIITLEQGKPLKEAIGEVNYGAAFIEFSAEEAKRIYGDIIPSPLAD 181
Query: 182 RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 241
RRL VLKQPVGV GAITPWNFPLAMITRKVGPALACGCTVV+KPSE TPLTALAAAELAL
Sbjct: 182 RRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELAL 241
Query: 242 QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 301
QAGIPPG VNVV GNAP+IGDALL S QVRKITFTGSTAVGKKLMAGAA TVKKVSLELG
Sbjct: 242 QAGIPPGAVNVVFGNAPEIGDALLASRQVRKITFTGSTAVGKKLMAGAAQTVKKVSLELG 301
Query: 302 GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 361
GNAPCI+FDDADL VAV GAL KFRNSGQTCVCANR+LVQEGIYEKFA AFS+AV++++
Sbjct: 302 GNAPCIIFDDADLEVAVKGALGTKFRNSGQTCVCANRILVQEGIYEKFAIAFSQAVQSMQ 361
Query: 362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVK 421
VG+GF EGVVQGPLIN+AA++KVE+FV+DAVSKGAKVLLGG+RHSLGMTFYEPTV+ ++K
Sbjct: 362 VGEGFTEGVVQGPLINEAAVQKVESFVKDAVSKGAKVLLGGKRHSLGMTFYEPTVIGDIK 421
Query: 422 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 481
++ML++R EVFGPVAPLL FKTEEEAI +ANDTNAGLAAY+FT N+QR WRV+EALEYGL
Sbjct: 422 NDMLIARNEVFGPVAPLLRFKTEEEAIRIANDTNAGLAAYVFTENVQRMWRVTEALEYGL 481
Query: 482 VGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 528
VGVNEGL+STEVAPFGGVK+SGLGREGSKYGMDEFLE+KYVC G+++
Sbjct: 482 VGVNEGLVSTEVAPFGGVKESGLGREGSKYGMDEFLEMKYVCFGNIS 528
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736107|emb|CBI24145.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/497 (80%), Positives = 456/497 (91%)
Query: 32 FSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGG 91
+RQ+S+ +++ RL SGLLR+Q LIGGKW +AYDGKT+ VHNPATG+V+ NV CMGG
Sbjct: 27 LTRQISMDTQNLVARLNSSGLLRSQCLIGGKWTEAYDGKTIPVHNPATGDVLVNVPCMGG 86
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
+ET DAIS A++AF SWSKLTAAERSK LRKWYDLL+A+KEELGQ+ITLEQGKPLKEA+G
Sbjct: 87 QETNDAISVAYEAFLSWSKLTAAERSKRLRKWYDLLIANKEELGQIITLEQGKPLKEAIG 146
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
EV+YGA FIEF AEEAKR+YG+IIP+ L DRRL VLKQPVGV GAITPWNFPLAMITRKV
Sbjct: 147 EVNYGAAFIEFSAEEAKRIYGDIIPSPLADRRLLVLKQPVGVVGAITPWNFPLAMITRKV 206
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
GPALACGCTVV+KPSE TPLTALAAAELALQAGIPPG VNVV GNAP+IGDALL S QVR
Sbjct: 207 GPALACGCTVVIKPSELTPLTALAAAELALQAGIPPGAVNVVFGNAPEIGDALLASRQVR 266
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331
KITFTGSTAVGKKLMAGAA TVKKVSLELGGNAPCI+FDDADL VAV GAL KFRNSGQ
Sbjct: 267 KITFTGSTAVGKKLMAGAAQTVKKVSLELGGNAPCIIFDDADLEVAVKGALGTKFRNSGQ 326
Query: 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391
TCVCANR+LVQEGIYEKFA AFS+AV++++VG+GF EGVVQGPLIN+AA++KVE+FV+DA
Sbjct: 327 TCVCANRILVQEGIYEKFAIAFSQAVQSMQVGEGFTEGVVQGPLINEAAVQKVESFVKDA 386
Query: 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451
VSKGAKVLLGG+RHSLGMTFYEPTV+ ++K++ML++R EVFGPVAPLL FKTEEEAI +A
Sbjct: 387 VSKGAKVLLGGKRHSLGMTFYEPTVIGDIKNDMLIARNEVFGPVAPLLRFKTEEEAIRIA 446
Query: 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 511
NDTNAGLAAY+FT N+QR WRV+EALEYGLVGVNEGL+STEVAPFGGVK+SGLGREGSKY
Sbjct: 447 NDTNAGLAAYVFTENVQRMWRVTEALEYGLVGVNEGLVSTEVAPFGGVKESGLGREGSKY 506
Query: 512 GMDEFLEIKYVCLGDMN 528
GMDEFLE+KYVC G+++
Sbjct: 507 GMDEFLEMKYVCFGNIS 523
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| TAIR|locus:2206405 | 528 | ALDH5F1 "AT1G79440" [Arabidops | 0.994 | 0.998 | 0.758 | 1.7e-217 | |
| UNIPROTKB|Q9I6M5 | 483 | gabD "Succinate-semialdehyde d | 0.905 | 0.993 | 0.564 | 6.9e-150 | |
| UNIPROTKB|P25526 | 482 | gabD [Escherichia coli K-12 (t | 0.905 | 0.995 | 0.558 | 7.1e-148 | |
| UNIPROTKB|E1BDP3 | 526 | ALDH5A1 "Uncharacterized prote | 0.898 | 0.904 | 0.578 | 1e-146 | |
| TIGR_CMR|SO_1275 | 482 | SO_1275 "succinate-semialdehyd | 0.901 | 0.991 | 0.579 | 3.5e-146 | |
| UNIPROTKB|Q88RC0 | 480 | gabD "Succinate-semialdehyde d | 0.9 | 0.993 | 0.559 | 6.6e-145 | |
| UNIPROTKB|F1RUE3 | 537 | ALDH5A1 "Uncharacterized prote | 0.898 | 0.886 | 0.568 | 4.6e-144 | |
| UNIPROTKB|Q3MSM3 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.898 | 0.889 | 0.566 | 2.6e-143 | |
| UNIPROTKB|Q6A2H2 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.898 | 0.889 | 0.562 | 5.3e-143 | |
| UNIPROTKB|P51649 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.898 | 0.889 | 0.562 | 1.1e-142 |
| TAIR|locus:2206405 ALDH5F1 "AT1G79440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2101 (744.6 bits), Expect = 1.7e-217, P = 1.7e-217
Identities = 401/529 (75%), Positives = 461/529 (87%)
Query: 1 MTLSGVARVAFVGSRRIFASHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIG 60
M + ARVA G R++ +SH + + RQMS+ +SV+++LR SGLLRTQGLIG
Sbjct: 1 MVIGAAARVAIGGCRKLISSHTSLL--LVSSQCRQMSMDAQSVSEKLRSSGLLRTQGLIG 58
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
GKW+D+YD KT++V+NPATGE+IA+V+CMG KET DAI+S+++AF SWS+LTA ERSK L
Sbjct: 59 GKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAGERSKVL 118
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
R+WYDLL+AHKEELGQLITLEQGKPLKEA+GEV YGA FIE+YAEEAKRVYG+IIP L
Sbjct: 119 RRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDIIPPNLS 178
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXX 240
DRRL VLKQPVGV GAITPWNFPLAMITRKVGPALA GCTVVVKPSE TP
Sbjct: 179 DRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTALAAAELA 238
Query: 241 XXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL 300
G+PPG +NVVMGNAP+IGDALLTSPQVRKITFTGSTAVGKKLMA AA TVKKVSLEL
Sbjct: 239 LQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAPTVKKVSLEL 298
Query: 301 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 360
GGNAP IVFDDADL+VAV G LAAKFRNSGQTCVCANRVLVQ+GIY+KFA+AFS+AV+ L
Sbjct: 299 GGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAEAFSEAVQKL 358
Query: 361 KVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 420
+VGDGF +G QGPLIN AA++KVETFV+DAVSKGAK+++GG+RHSLGMTFYEPTV+ +V
Sbjct: 359 EVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGKRHSLGMTFYEPTVIRDV 418
Query: 421 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480
M++S+EE+FGPVAPL+ FKTEE+AI +ANDT AGLAAYIFTN++QR+WRV EALEYG
Sbjct: 419 SDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALEYG 478
Query: 481 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 529
LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDE+LEIKYVCLGDMNR
Sbjct: 479 LVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDMNR 527
|
|
| UNIPROTKB|Q9I6M5 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas aeruginosa PAO1 (taxid:208964)] | Back alignment and assigned GO terms |
|---|
Score = 1463 (520.1 bits), Expect = 6.9e-150, P = 6.9e-150
Identities = 271/480 (56%), Positives = 359/480 (74%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L+D+ L R Q + G W+DA +G+T++V+NPATGE+I +V MG ET+ AI +A A
Sbjct: 2 QLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR+W+DL++ ++++L +L+T+EQGKPL EA GE+ Y A F+E++ E
Sbjct: 62 PAWRALTAKERANKLRRWFDLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EAKR+YG+ IP PD+R+ V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPSAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP GIP GV +VV G+A ++G L ++P VRK+TFTGST +G++L
Sbjct: 182 ASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
MA A +KKVSLELGGNAP IVFDDADL+ AV GAL +K+RN+GQTCVCANR+ VQ+G+
Sbjct: 242 MAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDGV 301
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y+ F D AV L +G+G GV GPLI+ A+ KVE + DAVSKGAKV+ GG+ H
Sbjct: 302 YDAFVDKLKAAVAKLNIGNGLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGGKPH 361
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
+LG TF+EPT+L +V LVS++E FGP+AP+ FK E E I M+NDT GLA+Y +
Sbjct: 362 ALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDEAEVIAMSNDTEFGLASYFYAR 421
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV+E LEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+CLG
Sbjct: 422 DLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLG 481
|
|
| UNIPROTKB|P25526 gabD [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 268/480 (55%), Positives = 353/480 (73%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP G+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+
Sbjct: 242 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 301
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y++FA+ +AV L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 302 YDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 361
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY +
Sbjct: 362 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 421
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
|
| UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 279/482 (57%), Positives = 354/482 (73%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S LLRT G +GG W+ A T VH+PA+G + V+ G E + A+ +A++AF SW
Sbjct: 47 SALLRTDGFVGGLWVSA--AATFPVHDPASGAELGLVADCGVPEARAAVRAAYEAFCSWR 104
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
++A ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 105 GVSAKERSSLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWFSEEARR 164
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II +RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 165 VYGDIISTPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 224
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+
Sbjct: 225 PFSALALAELANQAGIPPGVYNVIPCSQKKAKEVGEALCTDPLVSKISFTGSTATGKVLL 284
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG+AP IVFD A+++ AV GA+A+KFRNSGQTCVC+NR LVQ GI+
Sbjct: 285 HHAANSVKRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRNSGQTCVCSNRFLVQSGIH 344
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F F++A+K NL VG+GF E QGPLIN A+EKVE V DA+SKGA V+ GG+RH
Sbjct: 345 DSFVKKFAEAIKTNLHVGNGFDERTTQGPLINAKAVEKVEKHVSDAISKGATVVTGGKRH 404
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
+G F+EPT+LSNV +ML S+EE FGPVAP++ F TEEEA+ +AN N GLA Y ++
Sbjct: 405 HVGKNFFEPTLLSNVTRDMLCSQEETFGPVAPVIKFNTEEEAVAIANAANVGLAGYFYSQ 464
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 465 DPAQIWRVAERLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCFG 524
Query: 526 DM 527
+
Sbjct: 525 GL 526
|
|
| TIGR_CMR|SO_1275 SO_1275 "succinate-semialdehyde dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 277/478 (57%), Positives = 348/478 (72%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
L D LLR Q I G+W DA +T+ + NPATG VIA V MG ET+ AI++A A
Sbjct: 3 LNDPSLLRQQCYINGQWCDANSKETVAITNPATGAVIACVPVMGQAETQAAIAAAEAALP 62
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
+W LTA ER LR+W++LL + ++L L+T EQGKPL EA GEV Y A FIE++AEE
Sbjct: 63 AWRALTAKERGAKLRRWFELLNENSDDLALLMTSEQGKPLTEAKGEVTYAASFIEWFAEE 122
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
AKR+YG+ IP D+R+ V+KQPVGV AITPWNFP AMITRK PALA GCT+VVKP+
Sbjct: 123 AKRIYGDTIPGHQGDKRIMVIKQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVKPA 182
Query: 227 EFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
TP GIP GV +V+ G+A IG+ + T+P VRK++FTGST VG KLM
Sbjct: 183 PQTPFTALALAVLAERAGIPAGVFSVITGDAIAIGNEMCTNPIVRKLSFTGSTNVGIKLM 242
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A A T+KK+SLELGGNAP IVFDDA+++ AV GA+ AK+RN+GQTCVCANR+ VQ G+Y
Sbjct: 243 AQCAPTLKKLSLELGGNAPFIVFDDANIDAAVEGAMIAKYRNAGQTCVCANRIYVQAGVY 302
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
++FA+ S AV LKVG+G GV GPLIN AA+EKV++ +EDA+ KGA VL GG+ H
Sbjct: 303 DEFAEKLSMAVAKLKVGEGIIAGVTTGPLINAAAVEKVQSHLEDAIKKGATVLAGGKVHE 362
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
LG F+EPTVL+N M V+REE FGP+APL F ++ I ANDT GLAAY + +
Sbjct: 363 LGGNFFEPTVLTNADKSMRVAREETFGPLAPLFKFNDVDDVIKQANDTEFGLAAYFYGRD 422
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ W+V+E+LEYG+VGVN GLISTEVAPFGG+K SGLGREGSKYG++E+LEIKY+C+
Sbjct: 423 ISLVWKVAESLEYGMVGVNTGLISTEVAPFGGMKSSGLGREGSKYGIEEYLEIKYICM 480
|
|
| UNIPROTKB|Q88RC0 gabD "Succinate-semialdehyde dehydrogenase" [Pseudomonas putida KT2440 (taxid:160488)] | Back alignment and assigned GO terms |
|---|
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 268/479 (55%), Positives = 355/479 (74%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L+D+ L R Q I G+W+DA +G+T++V NPATGEVI V MG ET+ AI +A A
Sbjct: 2 QLKDAQLFRQQAYINGEWLDADNGQTIKVTNPATGEVIGTVPKMGTAETRRAIEAADKAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ERS LR+W++L++ ++++L +L+T EQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERSAKLRRWFELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EAKR+YG+ IP PD+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EAKRIYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP GIP GV++VV G+A ++G L + VRK++FTGST +G++L
Sbjct: 182 ASQTPYSALALVELAHRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GA+ +K+RN+GQTCVCANR+ VQ+G+
Sbjct: 242 MEECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDGV 301
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y+ FA+ + AV LK+G+G EG GPLI+ A+ KV+ +EDAVSKGAKVL GG+
Sbjct: 302 YDAFAEKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIEDAVSKGAKVLSGGKL- 360
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
+ F+EPT+L +V V++EE FGP+APL FK E E I M+NDT GLA+Y +
Sbjct: 361 -IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYAR 419
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
++ R +RV+EALEYG+VG+N GLIS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+
Sbjct: 420 DMSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCI 478
|
|
| UNIPROTKB|F1RUE3 ALDH5A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
Identities = 275/484 (56%), Positives = 355/484 (73%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S LLRT G +GG+W+ A T V++PA+G + V+ G E + A+ +A++AF +W
Sbjct: 56 SALLRTDGFVGGRWLSA--ASTFPVYDPASGAELGLVADCGVSEARAAVRAAYEAFCTWK 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
++A ERS LRKWYDL++ +K++L ++IT E GKPLKEA GE+ Y A F+E+ +EEA+R
Sbjct: 114 GVSAKERSSFLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWCSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG++I +RR VLKQPVGVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDVIYTPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIPPGV NV+ A ++G+AL T P V KI+FTGSTA GK L+
Sbjct: 234 PFSALALAQLANQAGIPPGVYNVIPCSQKKAMEVGEALCTDPLVSKISFTGSTATGKVLL 293
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG+AP IVFD A+++ AV GA+ +KFRNSGQTCVC+NR LVQ GI+
Sbjct: 294 HHAANSVKRVSMELGGHAPFIVFDSANVDQAVAGAMVSKFRNSGQTCVCSNRFLVQRGIH 353
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F F++A+K NL VG+GF E QGPLIN+ A+EKVE V DA+SKGA V+ GG+RH
Sbjct: 354 DSFVKKFAEAIKTNLCVGNGFEERTTQGPLINEKAVEKVEKHVIDAISKGATVVTGGKRH 413
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG--LAAYIF 463
+G F+EPT+LSNV EML SREE FGP+AP++ F TEEEA+ +AN N G ++ Y +
Sbjct: 414 QVGKNFFEPTLLSNVTQEMLCSREETFGPLAPVIKFDTEEEAVAIANAANVGWQVSRYFY 473
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
+ +L + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC
Sbjct: 474 SQDLAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVC 533
Query: 524 LGDM 527
G +
Sbjct: 534 FGGL 537
|
|
| UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)] | Back alignment and assigned GO terms |
|---|
Score = 1401 (498.2 bits), Expect = 2.6e-143, P = 2.6e-143
Identities = 273/482 (56%), Positives = 354/482 (73%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG AP IVFD A+++ AV GALA+KFRN+GQTCVC+NR LVQ GI+
Sbjct: 294 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIH 353
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F AF++A+K NL VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH
Sbjct: 354 DAFVKAFAEAMKKNLHVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRH 413
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 414 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 473
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 474 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 533
Query: 526 DM 527
+
Sbjct: 534 GL 535
|
|
| UNIPROTKB|Q6A2H2 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Pongo pygmaeus (taxid:9600)] | Back alignment and assigned GO terms |
|---|
Score = 1398 (497.2 bits), Expect = 5.3e-143, P = 5.3e-143
Identities = 271/482 (56%), Positives = 354/482 (73%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF SW
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIYTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI+
Sbjct: 294 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 353
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA ++ GG+RH
Sbjct: 354 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATIVTGGKRH 413
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 414 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQ 473
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 474 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 533
Query: 526 DM 527
+
Sbjct: 534 GL 535
|
|
| UNIPROTKB|P51649 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
Identities = 271/482 (56%), Positives = 354/482 (73%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF W
Sbjct: 56 AALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWR 113
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++EEA+R
Sbjct: 114 EVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARR 173
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP+E T
Sbjct: 174 VYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDT 233
Query: 230 PXXXXXXXXXXXXXGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
P GIP GV NV+ NA ++G+A+ T P V KI+FTGST GK L+
Sbjct: 234 PFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILL 293
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ GI+
Sbjct: 294 HHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 353
Query: 347 EKFADAFSKAVK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F AF++A+K NL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ GG+RH
Sbjct: 354 DAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH 413
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y ++
Sbjct: 414 QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQ 473
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KYVC G
Sbjct: 474 DPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 533
Query: 526 DM 527
+
Sbjct: 534 GL 535
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8BWF0 | SSDH_MOUSE | 1, ., 2, ., 1, ., 2, 4 | 0.575 | 0.8943 | 0.9063 | yes | no |
| P51649 | SSDH_HUMAN | 1, ., 2, ., 1, ., 2, 4 | 0.5797 | 0.9 | 0.8915 | yes | no |
| P25526 | GABD_ECOLI | 1, ., 2, ., 1, ., 7, 9 | 0.575 | 0.9056 | 0.9958 | N/A | no |
| Q9US47 | SSDH1_SCHPO | 1, ., 2, ., 1, ., 1, 6 | 0.5 | 0.9358 | 0.9067 | yes | no |
| Q9SAK4 | SSDH_ARATH | 1, ., 2, ., 1, ., 2, 4 | 0.7826 | 0.9943 | 0.9981 | yes | no |
| Q6A2H2 | SSDH_PONPY | 1, ., 2, ., 1, ., 2, 4 | 0.5797 | 0.9 | 0.8915 | N/A | no |
| P94428 | GABD_BACSU | 1, ., 2, ., 1, ., 7, 9 | 0.5426 | 0.8566 | 0.9826 | yes | no |
| Q6A2H0 | SSDH_PANTR | 1, ., 2, ., 1, ., 2, 4 | 0.5797 | 0.9 | 0.8915 | yes | no |
| Q6A2H1 | SSDH_GORGO | 1, ., 2, ., 1, ., 2, 4 | 0.5797 | 0.9 | 0.8915 | N/A | no |
| Q3MSM4 | SSDH_PANPA | 1, ., 2, ., 1, ., 2, 4 | 0.5797 | 0.9 | 0.8915 | N/A | no |
| P51650 | SSDH_RAT | 1, ., 2, ., 1, ., 2, 4 | 0.5791 | 0.8943 | 0.9063 | yes | no |
| Q3MSM3 | SSDH_HYLLA | 1, ., 2, ., 1, ., 2, 4 | 0.5838 | 0.9 | 0.8915 | N/A | no |
| P38067 | UGA2_YEAST | 1, ., 2, ., 1, ., 1, 6 | 0.4979 | 0.9056 | 0.9657 | yes | no |
| B9F3B6 | SSDH_ORYSJ | 1, ., 2, ., 1, ., 2, 4 | 0.7620 | 0.9716 | 0.9772 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| ALDH5F1 | ALDH5F1; 3-chloroallyl aldehyde dehydrogenase/ NAD or NADH binding / succinate-semialdehyde dehydrogenase; Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004). ; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (528 aa) | ||||||||||
(Arabidopsis thaliana) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GAD5 | GAD5 (glutamate decarboxylase 5); calmodulin binding; glutamate decarboxylase 5 (GAD5); FUNCTIO [...] (494 aa) | • | 0.883 | ||||||||
| GLYR1 | GLYR1 (GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase [...] (289 aa) | • | 0.880 | ||||||||
| GAD | GAD; calmodulin binding / glutamate decarboxylase; Encodes one of two isoforms of glutamate dec [...] (502 aa) | • | 0.877 | ||||||||
| POP2 | POP2 (POLLEN-PISTIL INCOMPATIBILITY 2); 4-aminobutyrate transaminase/ 4-aminobutyrate-pyruvate [...] (504 aa) | • | • | • | • | 0.861 | |||||
| CSY2 | CSY2 (citrate synthase 2); citrate (SI)-synthase; Encodes a peroxisomal citrate synthase that i [...] (514 aa) | • | • | • | 0.860 | ||||||
| CSY3 | CSY3 (citrate synthase 3); citrate (SI)-synthase; Encodes a peroxisomal citrate synthase that i [...] (509 aa) | • | • | 0.841 | |||||||
| ICDH | ICDH (ISOCITRATE DEHYDROGENASE); isocitrate dehydrogenase (NADP+)/ oxidoreductase, acting on th [...] (416 aa) | • | • | 0.839 | |||||||
| CSY1 | CSY1 (CITRATE SYNTHASE 1); citrate (SI)-synthase/ transferase, transferring acyl groups, acyl g [...] (480 aa) | • | • | 0.834 | |||||||
| AT2G22450 | riboflavin biosynthesis protein, putative; riboflavin biosynthesis protein, putative; FUNCTIONS [...] (476 aa) | • | 0.831 | ||||||||
| AT3G55410 | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative / al [...] (1017 aa) | • | • | 0.831 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 0.0 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 0.0 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 0.0 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 0.0 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 0.0 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 0.0 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-179 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-178 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-169 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-168 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-167 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-165 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-162 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-160 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-159 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-155 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-154 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-154 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-153 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-153 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-150 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-150 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-150 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-149 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-149 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-148 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-146 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-146 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-146 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-146 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-145 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-144 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-144 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-143 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-141 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-141 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-141 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-140 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-140 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-139 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-139 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-138 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-137 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-136 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-134 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-133 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-133 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-131 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-131 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 1e-127 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-127 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-127 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-127 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-124 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-123 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-121 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-121 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-120 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-118 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-118 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-113 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 1e-113 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-112 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 1e-109 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-106 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 1e-106 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-103 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-103 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 1e-102 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-98 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 1e-96 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 8e-93 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 3e-92 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 2e-85 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 4e-85 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 5e-83 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 6e-80 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 1e-78 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 7e-78 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 7e-77 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 4e-74 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-74 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-72 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-72 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 2e-70 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 8e-70 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 6e-69 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 3e-68 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 2e-67 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 9e-67 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 7e-63 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 1e-57 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 5e-55 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 8e-54 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-53 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-53 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-45 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 2e-42 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 3e-42 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 6e-42 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 3e-40 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 9e-32 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 6e-29 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 5e-27 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 2e-26 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 4e-23 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 5e-22 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 5e-10 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 1e-09 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 6e-09 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 6e-09 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 2e-08 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 1e-07 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 4e-07 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 1e-06 | |
| PRK13805 | 862 | PRK13805, PRK13805, bifunctional acetaldehyde-CoA/ | 8e-05 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 6e-04 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 951 bits (2460), Expect = 0.0
Identities = 403/498 (80%), Positives = 450/498 (90%)
Query: 31 AFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMG 90
+R S+ +S +LR++GLLRTQGLIGGKW DAYDGKT V+NPATGEVIANV CMG
Sbjct: 1 PSTRASSMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMG 60
Query: 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150
ET DAI+SA DAF SWSKLTA+ERSK LR+WYDL++A+KE+L QL+TLEQGKPLKEA+
Sbjct: 61 RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI 120
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
GEV YGA F+E++AEEAKRVYG+IIP+ PDRRL VLKQPVGV GAITPWNFPLAMITRK
Sbjct: 121 GEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRK 180
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
VGPALA GCTVVVKPSE TPLTALAAAELALQAGIPPGV+NVVMG+AP+IGDALL SP+V
Sbjct: 181 VGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKV 240
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
RKITFTGSTAVGKKLMAGAA TVK+VSLELGGNAP IVFDDADL+VAV GALA+KFRNSG
Sbjct: 241 RKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSG 300
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
QTCVCANR+LVQEGIY+KFA+AFSKAV+ L VGDGF EGV QGPLIN+AA++KVE+ V+D
Sbjct: 301 QTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQD 360
Query: 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450
AVSKGAKVLLGG+RHSLG TFYEPTVL +V +ML+ REEVFGPVAPL FKTEEEAI +
Sbjct: 361 AVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAI 420
Query: 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 510
ANDT AGLAAYIFT +LQR WRVSEALEYG+VGVNEGLISTEVAPFGGVKQSGLGREGSK
Sbjct: 421 ANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSK 480
Query: 511 YGMDEFLEIKYVCLGDMN 528
YG+DE+LEIKYVCLG+MN
Sbjct: 481 YGIDEYLEIKYVCLGNMN 498
|
Length = 498 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 813 bits (2102), Expect = 0.0
Identities = 288/451 (63%), Positives = 350/451 (77%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATGEVI V G + AI +A AF +W K TA ER+ LR+W DL+ E+
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+TLEQGKPL EA GEVDY A F+E++AEEA+R+YG IP+ P +R+ V+KQPVGV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AITPWNFP AMITRK+ PALA GCTVV+KP+E TPL+ALA AELA +AG+P GV+NVV
Sbjct: 121 VAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVV 180
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313
G+ +IG+AL SP+VRKI+FTGSTAVGK LMA AA TVK+VSLELGGNAP IVFDDAD
Sbjct: 181 TGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240
Query: 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373
L+ AV+GA+A+KFRN+GQTCVCANR+ V E IY++F + + VK LKVG+G EG G
Sbjct: 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMG 300
Query: 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 433
PLIN+ A+EKVE VEDAV+KGAKVL GG+R LG FYEPTVL++V +ML+ EE FG
Sbjct: 301 PLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFG 360
Query: 434 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 493
PVAP++ F TE+E I ANDT GLAAY+FT +L R WRV+EALE G+VG+N GLIS
Sbjct: 361 PVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAE 420
Query: 494 APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
APFGGVK+SGLGREG K G++E+LE KYV L
Sbjct: 421 APFGGVKESGLGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 688 bits (1777), Expect = 0.0
Identities = 296/448 (66%), Positives = 360/448 (80%), Gaps = 1/448 (0%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V+NPATGE+I +V G ET+ AI +A++AF +W TA ERS LRKWY+L+M +K++
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +LITLE GKPLKEA GE+ Y A F+E++AEEAKRVYG+ IP+ D+RL V+KQPVGV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AITPWNFP AMITRK G ALA GCTVVVKP+E TPL+ALA A LA QAGIP GV+NV+
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 254 MGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
G+ A ++G+ L TSP VRKI+FTGST VGK LM +A TVKKVS+ELGGNAP IVFDDA
Sbjct: 181 TGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ AV GA+A+KFRN+GQTCVCANR+ V +GIY++FA ++AVK LKVG+G EGV Q
Sbjct: 241 DLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQ 300
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 432
GPLIN+ A+EKVE + DAV KGAKV+ GG+RH LG F+EPTVLSNV ++MLVS+EE F
Sbjct: 301 GPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETF 360
Query: 433 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
GP+AP+ F EEE I +ANDT GLAAY F+ +L R WRV+EALEYG+VG+N GLIS
Sbjct: 361 GPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTGLISNV 420
Query: 493 VAPFGGVKQSGLGREGSKYGMDEFLEIK 520
VAPFGGVKQSGLGREGSKYG++E+LE K
Sbjct: 421 VAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 644 bits (1662), Expect = 0.0
Identities = 277/480 (57%), Positives = 366/480 (76%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 2 QLNDSTLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR+W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 62 PAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 122 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AGIP GV NVV G+A +G L ++P VRK++FTGST +G++L
Sbjct: 182 ASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQL 241
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+
Sbjct: 242 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 301
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y++FA+ +AV L +GDG +GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 302 YDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 361
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
LG F++PT+L +V + V++EE FGP+APL FK E + I ANDT GLAAY +
Sbjct: 362 ELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 421
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 422 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
Length = 482 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 614 bits (1586), Expect = 0.0
Identities = 225/461 (48%), Positives = 308/461 (66%), Gaps = 3/461 (0%)
Query: 63 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
W+D+ +T+EV NPATGEVIA V ++ A+++A AF +W+K +ER+ L K
Sbjct: 1 WVDS-SSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLK 59
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDR 182
DLL ++EL +L TLE GKPL EA GEV + +YA A+++ GE +P+ P
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPSD-PGV 118
Query: 183 RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQ 242
+ ++P+GV GAITPWNFPL + K+ PALA G TVV+KPSE TPLTAL AEL +
Sbjct: 119 LAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEE 178
Query: 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 302
AG+PPGV+NVV G+ ++GDAL+ P V K++FTGST VG+++ AA +K+V+LELGG
Sbjct: 179 AGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLELGG 238
Query: 303 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 362
P IVFDDADL+ AV GA+ F N+GQ C +R+LV E IY++F + +A K+LKV
Sbjct: 239 KNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKV 298
Query: 363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKS 422
GD GPLI+K E+V +++EDA +GAK+L GG F EPTVL++V
Sbjct: 299 GDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTP 358
Query: 423 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 482
+M +++EE+FGPV ++ FK E+EAI +ANDT GLAA +FTN+L+R RV+ LE G+V
Sbjct: 359 DMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMV 418
Query: 483 GVNEGLISTEVA-PFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+N+ A PFGG KQSG GREG K G++E+ E K V
Sbjct: 419 WINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETKTV 459
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 598 bits (1544), Expect = 0.0
Identities = 243/469 (51%), Positives = 325/469 (69%), Gaps = 7/469 (1%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
LI G+W+D T+EV NPATGEVIA V ++ A+++A AF +WS+L+A ER+
Sbjct: 4 LIDGEWVDG--ASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA 61
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ DLL A EEL LITLE GKP+ EA GE+ A FI +YAEEA+R+ GE IP
Sbjct: 62 AILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPT 121
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
+ V ++P+GV GAITPWNFPLA+ K+ PALA G TVV+KPSE TPL+ALA A
Sbjct: 122 D-KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALA 180
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
ELA +AG+P GV+NVV G ++GDAL+ P V I+FTGSTAVG+ + A AA +K V+
Sbjct: 181 ELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVT 240
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LELGG +P IV +DADL+ AV+ A+ F N+GQ C A+R++V E +Y++F +
Sbjct: 241 LELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARA 300
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 417
+LKVGD GPLI++ L++VE ++EDAV++GA++L GG+R G F EPT+L
Sbjct: 301 ASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP--GGYFVEPTIL 358
Query: 418 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 477
V +M ++REE+FGPV P++ FK EEEAI +ANDT GLAA IFT +L R +RV+ L
Sbjct: 359 EGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRL 418
Query: 478 EYGLVGVNEGLISTEV--APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
E G+VG+N+ ++ PFGGVKQSGLGREG KYG++EF E+K V +
Sbjct: 419 EAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTI 467
|
Length = 472 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 568 bits (1466), Expect = 0.0
Identities = 223/430 (51%), Positives = 300/430 (69%), Gaps = 2/430 (0%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A+++A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 3 AVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARA 62
Query: 157 AKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
A +YA A+R++GE+IP+ P V ++P+GV GAITPWNFPL + K+ PALA
Sbjct: 63 ADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALA 122
Query: 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TVV+KPSE TPLTAL AEL +AG+PPGV+NVV G+ ++G AL + P+V KI+FT
Sbjct: 123 AGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFT 182
Query: 277 GSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 336
GSTAVGK +M AA +K+V+LELGG +P IVFDDADL+ AV GA+ F N+GQ C A
Sbjct: 183 GSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAA 242
Query: 337 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 396
+R+LV E IY++F + + VK LKVG+ GPLI+ A L++V ++EDA ++GA
Sbjct: 243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGA 302
Query: 397 KVLLGGRR-HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 455
K+L GG+R F PTVL++V +M +++EE+FGPV P++ FK EEEAI +ANDT
Sbjct: 303 KLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTE 362
Query: 456 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMD 514
GLAA +FT +L+R RV+E LE G V +N+ + E APFGGVKQSG+GREG YG++
Sbjct: 363 YGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGREGGPYGLE 422
Query: 515 EFLEIKYVCL 524
E+ E K V +
Sbjct: 423 EYTEPKTVTI 432
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 546 bits (1409), Expect = 0.0
Identities = 213/467 (45%), Positives = 299/467 (64%), Gaps = 5/467 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G+++ + G+T++V NPATGEV+A V ++ A+ +A A +W +L A ER+
Sbjct: 2 INGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAA 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
LRK DL+ + +EL +LI EQGK L A EV++ A +I++ AE A+R+ GEIIP+
Sbjct: 62 YLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSD 121
Query: 179 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 238
P+ +F+ K P+GV I PWNFP +I RK+ PAL G T+V+KPSE TPL AL AE
Sbjct: 122 RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAE 181
Query: 239 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL 298
L +AG+P GV+N+V G +GDAL+ P+V I+ TGST G+K+M AA + KVSL
Sbjct: 182 LVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSL 241
Query: 299 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVK 358
ELGG AP IV DADL++AV + ++ N GQ C CA RV V E IY++F + + +K
Sbjct: 242 ELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMK 301
Query: 359 NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVL 417
+KVGD F GPL+N+AAL+KVE VE AV GA +L GG+R FYEPTVL
Sbjct: 302 AVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVL 361
Query: 418 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 477
+NV+ +M + +EE+FGPV P++ F + +EAI +AND+ GL +YI+T NL R + L
Sbjct: 362 TNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNEL 421
Query: 478 EYGLVGVNEGLISTEVAP--FGGVKQSGLGREGSKYGMDEFLEIKYV 522
E+G +N + E G K+SGLG K+G++E+L+ K V
Sbjct: 422 EFGETYINRE--NFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVV 466
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 518 bits (1336), Expect = 0.0
Identities = 208/472 (44%), Positives = 289/472 (61%), Gaps = 5/472 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS--KLT 112
T I +++D+ GKT NPAT EVI V+ ++ A+ +A AF + K+
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVY 171
ER + L K DL+ ++EL L +L+ GKPL+E A G+V K + +YA A ++
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ IP + + ++P+GV G I PWNFPL M+ K+ PALA G TVV+KP+E TPL
Sbjct: 124 GKTIP-IDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPL 182
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM-AGAA 290
+AL AEL +AG PPGVVN+V G P G A+ + V KI FTGSTAVG+ +M A A
Sbjct: 183 SALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+KKV+LELGG +P IVFDDADL+ AV A F N GQ C +R+ VQE IY++F
Sbjct: 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFV 302
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ F + VGD F QGP ++KA +K+ +++E +GA +L GG RH
Sbjct: 303 EKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGY 362
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
F +PTV ++VK +M +++EE+FGPV +L FKTE+E I ANDT GLAA +FT ++ +
Sbjct: 363 FIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKA 422
Query: 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
RVS AL+ G V VN + PFGG KQSG GRE + G++E+ ++K V
Sbjct: 423 LRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAV 474
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 512 bits (1321), Expect = e-179
Identities = 217/456 (47%), Positives = 293/456 (64%), Gaps = 6/456 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
NPATGEV+A V G E A+++A +AF WS+++ AER++ L K DL+ A +E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L L +L+ GKP+ A ++ A F+A+ ++ GE P +VL+QPVG
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYP-QDGGALNYVLRQPVG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
VAG ITPWN PL ++T K+ PALA G TVV+KPSE+TPLTA AELA +AG+PPGVVNV
Sbjct: 120 VAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G P+ G AL+ P V I+FTG TA G+ +M AA +K VSLELGG P IVF DA
Sbjct: 180 VHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ AV+ A+ + F N+G+ C+ +R+LVQ IY++F + F + K LKVGD
Sbjct: 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEV 299
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVSR 428
GPLI+K LEKV +VE A ++GA +L GG R L F EPTV++ + ++ V++
Sbjct: 300 GPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQ 359
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488
EE+FGPV ++ F EEEAI +ANDT GLAAY++T +L R RV+ LE G V VN L
Sbjct: 360 EEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWL 419
Query: 489 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ PFGGVK SG+GREG Y ++ + E+K VC+
Sbjct: 420 VRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 508 bits (1311), Expect = e-178
Identities = 205/455 (45%), Positives = 280/455 (61%), Gaps = 6/455 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHK 131
NPATGE A V + A+++A AF W KLT ER K LR+ DL+ A+
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
EEL +L T + GK ++E +V Y A++ +YA A ++ G +IP D F ++P+
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV AITPWN PL ++ +K+ PALA G TVV+KPSE TP + L A+LA +AG PPGVVN
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVN 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311
VV G P+ G+AL+ P V KI FTG T G+ + AA + V+LELGG +P IVFDD
Sbjct: 181 VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240
Query: 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371
ADL+ AVNG +A F +GQTCV +R+LVQ IY++F + + ++VGD
Sbjct: 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQ 300
Query: 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLVS 427
GPL + LEKVE +V A +GA+VL GG R S F+EPT+L++V ++M ++
Sbjct: 301 MGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIA 360
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 487
+EEVFGPV ++ F EEEAI +AND+ GLAA I+T +L R RV+ A+E G V VN
Sbjct: 361 QEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTY 420
Query: 488 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ +PFGG K SG+GRE + E+ + K V
Sbjct: 421 RALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSV 455
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 485 bits (1251), Expect = e-169
Identities = 190/447 (42%), Positives = 254/447 (56%), Gaps = 5/447 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATGEV A+ + A+++A AF WS ER L D + A+ EE
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+TLEQGKPL EA EV ++ + A E+I RR+ + ++P+GV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGAVAWLRYTASLDLPD--EVIEDD-DTRRVELRRKPLGV 117
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
AI PWNFPL + K+ PAL G TVV+KPS FTPL L ELA + +PPGV+NVV
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313
G ++G AL + P +RKI+FTGSTA GKK+MA AA T+K+V+LELGGN IV D D
Sbjct: 177 SGGD-ELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235
Query: 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373
++ F NSGQ C R+ V E IY++F +A K VGDG G G
Sbjct: 236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLG 295
Query: 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 433
P+ NK +KV+ VEDA +KGAKVL GG F PT++ + + EE FG
Sbjct: 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFG 355
Query: 434 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 493
PV P+L + E+E I AND+ GL A +++++L+R V+ LE G V +N
Sbjct: 356 PVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPD 415
Query: 494 APFGGVKQSGLGREGSKYGMDEFLEIK 520
APFGG KQSG+G E G+ E+ + +
Sbjct: 416 APFGGHKQSGIGVEFGIEGLKEYTQTQ 442
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 484 bits (1248), Expect = e-168
Identities = 210/458 (45%), Positives = 292/458 (63%), Gaps = 7/458 (1%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV NPA GEVI V + +E ++AI A A + S L A +R K L K +L+ K
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EEL +L+T+E GKP+K++ EV+ + + AEEAK + GE IP R F +
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++P+GV GAITP+NFP + K+ PA+A G +VVVKPS TPLTA+ A++ +AG+PP
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307
GV+NVV G ++GD ++T+P+V I+FTGSTAVG + + A GT KKV+LELGG+ P I
Sbjct: 181 GVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240
Query: 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367
V DADL AV+ A+ +F N+GQ C R+LV+E +Y+KF + VK LKVGD
Sbjct: 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLD 300
Query: 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 427
E GPLI+ A+E++E V DAV KG K+L GG+R +F+ PTVL N +M+V
Sbjct: 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKR--DEGSFFPPTVLENDTPDMIVM 358
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE- 486
+EEVFGPV P+ K +EEA+ +AN T GL A +FTN++ R +V+ LE G V +N+
Sbjct: 359 KEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDS 418
Query: 487 GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ PFGG K+SG+GREG +Y M E E K + +
Sbjct: 419 TRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 480 bits (1238), Expect = e-167
Identities = 201/470 (42%), Positives = 284/470 (60%), Gaps = 7/470 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 116
I G+W++A GKT ++ NPA GEVIA V ++ K AI++A AF+S W L A ER
Sbjct: 2 IDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQER 61
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + D + EEL +L TL GK L+E+ ++D A +YA A + GE+
Sbjct: 62 AALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYD 121
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
P +++PVGV G ITPWN+PL K+ PALA G TVV+KPSE TPLT +A
Sbjct: 122 VP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIAL 180
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG+P GVVN+V G+ +G L SP V ++FTG TA G+ +M AAG VKKV
Sbjct: 181 FELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKKV 240
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
+LELGG P IVF DAD AV+ AL F N+GQ C +R+LV+E I++KF A ++
Sbjct: 241 ALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAER 300
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFY 412
K +K+G+G GPL++ EKV ++++ +GA+++ GG+R + F
Sbjct: 301 AKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFV 360
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
EPT+ +V M + +EE+FGPV + F TEEEAI +ANDT GLA ++T ++ R R
Sbjct: 361 EPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANR 420
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
V+ L G V +N+ AP+GG KQSG+GRE G++E+ E K++
Sbjct: 421 VARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHI 470
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 476 bits (1228), Expect = e-165
Identities = 210/460 (45%), Positives = 287/460 (62%), Gaps = 14/460 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+EV +P GEVI V ++ + AI++A + L A ER++ L + LL +
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EE + I LE GKP+K+A EVD + + AEEAKR+ GE IP R F +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++P+GV AITP+NFPL ++ KVGPA+A G VV+KP+ TPL+AL AEL L+AG+P
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307
G +NVV G+ +GDAL+T P+VR I+FTGS AVG+ + A AG +KKV+LELG NA I
Sbjct: 181 GALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAI-ARKAG-LKKVTLELGSNAAVI 238
Query: 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367
V DADL AV ++ F N+GQ C+ R+ V E IY++F + F A K L VGD
Sbjct: 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLD 298
Query: 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 427
E GP+I++A E++E +VE+AV GA++L GG+R EPTVL++V +M V
Sbjct: 299 EDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDG---AILEPTVLTDVPPDMKVV 355
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 487
EEVF PV L F T +EAI MAND+ GL A +FTN+LQ+ + + LE G V +N+
Sbjct: 356 CEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMIND- 414
Query: 488 LIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
ST + P+GGVK+SG GREG +Y ++E EIK VC
Sbjct: 415 -SSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 469 bits (1209), Expect = e-162
Identities = 188/467 (40%), Positives = 275/467 (58%), Gaps = 12/467 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G W+ +T++V NPAT EVI V + A+++A AF +WS + ER+
Sbjct: 3 IDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAA 62
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRV-YGEIIP 176
L + + A +EL Q ITLE G P+ A +V G + A+ K + E
Sbjct: 63 LLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRG 122
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+L V+++P+GV G ITPWN+PL I KV PALA GCTVV+KPSE PL+A+
Sbjct: 123 NSL------VVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIIL 176
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AE+ +AG+P GV N+V G+ P +G+AL P V ++FTGST GK++ AA TVK+V
Sbjct: 177 AEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKRV 236
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
+LELGG + I+ DDADL AV +AA F NSGQ+C R+LV Y + + + A
Sbjct: 237 ALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAA 296
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYE 413
+ VGD GPL + A ++V+ +++ + +GA+++ GG G+ F +
Sbjct: 297 AEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVK 356
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PTV ++V +M ++REE+FGPV ++ + E+EAI +ANDT GLA Y+++ + +R V
Sbjct: 357 PTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAV 416
Query: 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
+ L G V +N + APFGG KQSG GRE +YG++EFLE+K
Sbjct: 417 ARRLRAGQVHINGAAFNPG-APFGGYKQSGNGREWGRYGLEEFLEVK 462
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 463 bits (1193), Expect = e-160
Identities = 194/452 (42%), Positives = 285/452 (63%), Gaps = 4/452 (0%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
+ NPA G V A V+ ++ + AI++A+DAF +W+ T +ER + L K +++
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV 191
++L L+ E G +A E + + + A E +RV GE +P+ P +++P+
Sbjct: 61 DDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPL 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV ITP+N+PL + T+KV ALA G TVV+KPSE TP+ L AE+ +AG+P GV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311
VV G ++GD L+ P+VR +TFTGSTAVG+++ A +KK++LELGG P IV D
Sbjct: 181 VVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240
Query: 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371
ADL+ AV A F + GQ C+ A+R++V+E +Y++F F LKVGD V
Sbjct: 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTV 300
Query: 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 431
GPLI+ +E+++ VEDAV+KGAK+L GG+ FY+PTVL++V +M + REE
Sbjct: 301 IGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREET 357
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV ++ K EEA+ +ANDT GL+A I TN+LQR ++++E LE G+V +N+ I
Sbjct: 358 FGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILD 417
Query: 492 E-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
E PFGGVK SG GREG ++ M+EF E+K++
Sbjct: 418 EAHVPFGGVKASGFGREGGEWSMEEFTELKWI 449
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 458 bits (1182), Expect = e-159
Identities = 186/430 (43%), Positives = 265/430 (61%), Gaps = 5/430 (1%)
Query: 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154
A ++A A +W+ ER+ LRK ++L ++E+ + E G +A EV
Sbjct: 3 DRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVG 62
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
+ A +R GEI+P+ +P + V + P+GV G I+P+NFPL + R V PA
Sbjct: 63 AAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPA 122
Query: 215 LACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKI 273
LA G VV+KP TP+T L AE+ +AG+P GV+NVV G +IGDAL+ P+VR I
Sbjct: 123 LALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRMI 182
Query: 274 TFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTC 333
+FTGSTAVG+ + A +KKV+LELGGN P IV DDADL++AV+ A F + GQ C
Sbjct: 183 SFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQIC 242
Query: 334 VCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393
+ A R+LV E +Y++F + K L VGD V GPLIN+ +++V VEDAV+
Sbjct: 243 MAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVA 302
Query: 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453
GA++L GG L FY+PTVLS+V +M + REE+FGPVAP++ F +EEA+ +AND
Sbjct: 303 AGARLLTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELAND 359
Query: 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYG 512
T GL+A +FT +L+R +E LE G+V +N+ ++ E PFGGVK SG GR G
Sbjct: 360 TEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGGGRFGGPAS 419
Query: 513 MDEFLEIKYV 522
++EF E +++
Sbjct: 420 LEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 451 bits (1163), Expect = e-155
Identities = 198/462 (42%), Positives = 284/462 (61%), Gaps = 14/462 (3%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDL 126
G+T NPATG V+A V+ + A+++A AF S WS+L+ AER L + DL
Sbjct: 1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADL 60
Query: 127 LMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF 185
+ AH++EL L TL+ GKP+ +A+ +V A +YAE +VYGE+ P T PD
Sbjct: 61 IEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAP-TGPDALAL 119
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
+ ++P+GV GA+ PWNFPL M K+ PALA G +VV+KP+E +PLTAL AELAL+AG+
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNA 304
P GV+NVV G G+AL V + FTGST VG++ + + + +K+V LE GG +
Sbjct: 180 PAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKS 239
Query: 305 PCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 363
P IVF DA DL+ A A A F N G+ C +R+LV E I ++F + A + K G
Sbjct: 240 PNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPG 299
Query: 364 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVK 421
D G L+++A +KV ++E ++GA+++ GG+R G F EPTV V
Sbjct: 300 DPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVT 359
Query: 422 SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 481
+M ++REE+FGPV ++ F +EEEA+ +AND+ GLAA ++T++L R RV+ L G
Sbjct: 360 PDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGT 419
Query: 482 VGVN---EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
V VN EG I+T PFGG KQSG GR+ S + +D++ E+K
Sbjct: 420 VWVNCFDEGDITT---PFGGFKQSGNGRDKSLHALDKYTELK 458
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 447 bits (1153), Expect = e-154
Identities = 190/472 (40%), Positives = 278/472 (58%), Gaps = 4/472 (0%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 112
++T+ LI G+ + +G+ V+NPATGEV+A ++ + A+++A AF WS+ T
Sbjct: 1 MQTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTT 59
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVY 171
ER++ L K D + + +E +L +L GKPL A+ E+ F+A A+ +
Sbjct: 60 PKERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLE 119
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ L + + PVGV +I PWN+PL M K+ PALA G TVV+KPSE TPL
Sbjct: 120 GKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPL 179
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
TAL AELA +PPGV+NVV G +GDAL+ P+VR ++ TGS A GK +++ AA
Sbjct: 180 TALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
+VK+ LELGG AP IVFDDADL+ V G + N+GQ C A R+ Q GIY+
Sbjct: 239 SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVA 298
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMT 410
+ AV LKVGD E GPLI+ A ++V FVE A + G +V+ GG
Sbjct: 299 KLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY 358
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
+YEPT+L+ + + + + EVFGPV + F E++A+ AND++ GLA+ ++T ++ R
Sbjct: 359 YYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRA 418
Query: 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
RVS L+YG VN + P GG KQSG G++ S YG++++ +++V
Sbjct: 419 HRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHV 470
|
Length = 475 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 448 bits (1153), Expect = e-154
Identities = 202/470 (42%), Positives = 291/470 (61%), Gaps = 7/470 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERS 117
I +++ + DG+T++ NP+TGEVIA+V G ++ A+ +A AF + WSK+T ER
Sbjct: 12 INNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG 71
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L K DL+ +++ L + L+ GKP A+G++D I +YA A ++ G+ IP
Sbjct: 72 ELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIP 131
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P++ + L +P GV G I PWN+PLAM K+ PALA G TVV+KP+E TPL+ L
Sbjct: 132 TS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYF 190
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
A L +AG PPGVVN++ G G AL P V KI FTGSTA G+ +M AA +K V
Sbjct: 191 ANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAV 250
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
+LE GG +P +VF+DADL+ AV A A NSGQ C +R+ VQE IY+KF + F +
Sbjct: 251 TLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEH 310
Query: 357 VK-NLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FY 412
VK N KVG F + V GP ++K ++V +++E +GAK++ GG + G+ F
Sbjct: 311 VKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFI 370
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PT+ ++V +M + +EE+FGPV + FKT EEAI ANDT GLAA +FT +++R R
Sbjct: 371 PPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHR 430
Query: 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
V+ LE G+V +N S PFGG K SG+GRE +YG++ + + K V
Sbjct: 431 VARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAV 480
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 445 bits (1147), Expect = e-153
Identities = 203/455 (44%), Positives = 282/455 (61%), Gaps = 7/455 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPAT I + ++ A+ +A AF W K T AER+K LR + + +EE
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV---YGEIIPATLPDRRLFVLKQP 190
L +L + GKPL EA +VD A E+YA+ A+++ +P D + V ++P
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 250
VGV G ITPWNFPL M KV PALA GCTVV+KPSE T LT L AE+A +AG+PPGV+
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 251 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310
NVV G + G L P + KI+FTGSTA G ++M AA +K VSLELGG +P IVFD
Sbjct: 181 NVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240
Query: 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370
DADL AV A+ F N+GQ C +R+LV E I + F + + A + ++VGD EGV
Sbjct: 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGV 300
Query: 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--FYEPTVLSNVKSEMLVSR 428
GPL+++A EKV +F+ +GA++L GGRR + F PTV ++V ++ + R
Sbjct: 301 RLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWR 360
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EG 487
EE+FGPV + F TE+EAI +AND+ GLAA + + + +R RV+EALE G+V +N
Sbjct: 361 EEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQ 420
Query: 488 LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ AP+GG K+SG+GRE ++G+D +LE+K +
Sbjct: 421 PCFPQ-APWGGYKRSGIGRELGEWGLDNYLEVKQI 454
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 446 bits (1149), Expect = e-153
Identities = 190/471 (40%), Positives = 285/471 (60%), Gaps = 7/471 (1%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAE 115
I G+W+ DG+ E NP+ T +V+ + ++ AI++A AF +W + +
Sbjct: 3 NYIDGEWVAGGDGE--ENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEA 60
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII 175
R+ L K D L A KEEL +L+T E+GK L EA GEV + +YA EA R+ GE +
Sbjct: 61 RADILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETL 120
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
P+T P + ++P+GV G ITPWNFP+A+ K+ PALA G TVV KP+E TP +A A
Sbjct: 121 PSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWA 180
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295
E+ +AG+P GV N+VMG+ ++G AL+ P V ++FTGSTAVG+++ A AA +
Sbjct: 181 LVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGAR 240
Query: 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 355
V LE+GG P +V DDADL++AV A+ F ++GQ C ++R++V EGI+++F +A +
Sbjct: 241 VQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVE 300
Query: 356 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--FYE 413
K LKVGD EGV GP++++ LEK ++E A S+GAK++ GG R +
Sbjct: 301 RTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLA 360
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
P + + V ++M ++REE+FGPVA ++ + +EA+ +ANDT GL+A I T +L+
Sbjct: 361 PALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHF 420
Query: 474 SEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 522
+E G+V VN + PFGG K S G RE + ++ + IK V
Sbjct: 421 KRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTV 471
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 439 bits (1132), Expect = e-150
Identities = 205/476 (43%), Positives = 274/476 (57%), Gaps = 12/476 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAF---NSWSK 110
T+ I +W D+ GKT NPATGE I V G K D A+ +A AF + W
Sbjct: 7 TKIFINNEWHDSVSGKTFPTINPATGEKICEVQE-GDKADVDKAVKAARAAFKLGSPWRT 65
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKR 169
+ A+ER + L K DL+ + L L TL+ GKP K + ++ K + +YA A +
Sbjct: 66 MDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADK 125
Query: 170 VYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
++G+ IP D F +PVGV G I PWNFPL M K+ PALACG TVV+KP+E
Sbjct: 126 IHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAE 182
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM- 286
TPLTAL A L +AG PPGVVNVV G P G A+ + P + K+ FTGST VGK +
Sbjct: 183 QTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A +K+V+LELGG +P IVF DADL+ AV A A F N GQ C +R VQE IY
Sbjct: 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY 302
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
++F + K VG+ F QGP I++ +K+ +E +GAK+ GG+RH
Sbjct: 303 DEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHG 362
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
F +PTV S+V +M +++EE+FGPV + FKT +E I AN+T GLAA +FT +
Sbjct: 363 DKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKD 422
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + S AL G V VN + + APFGG K SG GRE +YG+ E+ E+K V
Sbjct: 423 IDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTV 478
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 438 bits (1128), Expect = e-150
Identities = 202/451 (44%), Positives = 285/451 (63%), Gaps = 4/451 (0%)
Query: 76 NPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NPATGE+IA V+ E D A+++A AF +WS + AER + L + +L++A+ +EL
Sbjct: 3 NPATGELIARVA-QASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADEL 61
Query: 135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
+L +L+ GKP++ A +V A +YA A ++ GE+IP + +++PVGV
Sbjct: 62 ARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
GAI PWNFPL KV PALA G TVV+KP+E TPL+AL AEL +AG P GV+NVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313
G G AL+ P V KITFTGSTAVG+K+M GAAG +K+VSLELGG + IVF DAD
Sbjct: 181 TGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240
Query: 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373
L+ AV A F N GQ C +R+LV E IY++F + F+ ++L+ GD G
Sbjct: 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMG 300
Query: 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFG 433
PL+++A ++V +V+ +GA++L GG+R F EPT+ + V EM +++EE+FG
Sbjct: 301 PLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFG 360
Query: 434 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV 493
PV ++ F+ EEEA+ +AN T GLAA ++T +L R RV+ AL+ G V +N
Sbjct: 361 PVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPG 420
Query: 494 APFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+PFGG KQSG GRE + +DE+ E+K V +
Sbjct: 421 SPFGGYKQSGFGREMGREALDEYTEVKSVWV 451
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 433 bits (1115), Expect = e-150
Identities = 189/426 (44%), Positives = 249/426 (58%), Gaps = 61/426 (14%)
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A AF +W+ L AER+ LRK DLL +EEL L TLE GKP++EA+GEV
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219
+ A A ++ G +P+ P +V ++P+GV G ITPWNFPL + K+ PALA G
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 220 TVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 279
TVV+KPSE TPLTALA AEL +AG+PPGVVNVV G ++G ALL+ P+V KI+FTGST
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGST 181
Query: 280 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 339
AVGK +M AA +K V+LELGG +P IV +DADL+ AV GA+ F N+GQ C A+R+
Sbjct: 182 AVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241
Query: 340 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 399
LV E IY++F +EK+ T + D
Sbjct: 242 LVHESIYDEF-------------------------------VEKLVTVLVD--------- 261
Query: 400 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 459
V +M +++EE+FGPV P++ FK EEEAI +ANDT GL
Sbjct: 262 --------------------VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLT 301
Query: 460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLE 518
A +FT +L R RV+E L G V +N+ I APFGGVK SG+GREG YG++E+
Sbjct: 302 AGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTR 361
Query: 519 IKYVCL 524
K V +
Sbjct: 362 TKTVVI 367
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 435 bits (1122), Expect = e-149
Identities = 198/457 (43%), Positives = 269/457 (58%), Gaps = 11/457 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V PATGEV+A V C G ++ A+ SA A WS + ER + LRK DLL +E
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-DRRLFVLKQPVG 192
+ +L T++ GKP++EA ++D A +E+YA A + GE +P LP + ++P+G
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVP--LPGGSFAYTRREPLG 118
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V I WN+P+ + + K PALACG +V KPS FTPLTAL AE+ +AG+P GV NV
Sbjct: 119 VCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNV 178
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G + G L P V K++FTGS GKK+M+ AA +K V+LELGG +P I+FDDA
Sbjct: 179 VQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDA 237
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL AVNGA+ A F + GQ C RV VQ I ++F + + K +++GD E
Sbjct: 238 DLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQM 297
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-----GMTFYEPTVLSNVKSEMLVS 427
G LI++ LEKV ++E A +GAKVL GG R + P VL++ +M +
Sbjct: 298 GALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIV 357
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE- 486
REE+FGPV +L F TEEE I ANDT GLAA +FT +LQR RV L+ G +N
Sbjct: 358 REEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTY 417
Query: 487 GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
+ EV PFGG KQSG GRE ++ + ++K V
Sbjct: 418 NISPVEV-PFGGYKQSGFGRENGTAALEHYTQLKTVY 453
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 436 bits (1122), Expect = e-149
Identities = 204/472 (43%), Positives = 290/472 (61%), Gaps = 7/472 (1%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLTAAER 116
IGG+W+D+ G+T + NPA E + + D A+ +A +AF W K+ A R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L + +LL KEEL +L+T E GKPL E G+V ++ A E +R++GE +P
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ LP++ +QP+GV ITPWNFP+A+ + K+ PAL CG TVV KP+E TP AL
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
EL +AG+PPGVVNVV G ++G+AL+ P V ++FTGST VG+++ A K+V
Sbjct: 182 VELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKRV 241
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
+LE+GG P IV DDADL++A+ GAL + F +GQ C +R++V E +Y++F F +
Sbjct: 242 ALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVER 301
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT----FY 412
K L+VGDG E GPLIN+A LEKV + E +GA +LLGG R + G F
Sbjct: 302 AKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFV 361
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
EPTV ++V +M +++EE+FGPV L+ + EEAI +ANDT GL++ I+T ++ + +R
Sbjct: 362 EPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFR 421
Query: 473 VSEALEYGLVGVNEGLISTEV-APFGGVKQSGLG-REGSKYGMDEFLEIKYV 522
LE G+ VN I EV PFGGVK+SG G RE +D F E K V
Sbjct: 422 ARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 433 bits (1116), Expect = e-148
Identities = 184/469 (39%), Positives = 278/469 (59%), Gaps = 7/469 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAER 116
IGG+W+ +T++V +PAT EV+ V + A+++A AF++ W +L+ AER
Sbjct: 3 IGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAER 62
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEII 175
+ LR+ D L A +EL +L T E G P+ + + A + +YA A+ E
Sbjct: 63 AAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEER 122
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
+ V ++PVGV AI PWN PL + K+ PALA GCTVV+KPS TPL A
Sbjct: 123 RPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYL 182
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295
AE A +AG+PPGVVNVV + ++G+ L+ P V K++FTGSTA G+++ A + +
Sbjct: 183 LAEAAEEAGLPPGVVNVVPADR-EVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERLAR 241
Query: 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSK 355
V+LELGG + IV DDADL+ AV G + A N+GQ CV R+LV Y++ +A +
Sbjct: 242 VTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAA 301
Query: 356 AVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYE 413
AV LKVGD GPL + E+VE ++ ++GA+++ GG R F E
Sbjct: 302 AVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVE 361
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PT+ ++V ++M +++EE+FGPV ++ + E++A+ +AND++ GL+ ++T +++R V
Sbjct: 362 PTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAV 421
Query: 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + G VGVN G APFGG KQSG+GREG G+D +LE K +
Sbjct: 422 ARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETKSI 469
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 428 bits (1102), Expect = e-146
Identities = 198/450 (44%), Positives = 263/450 (58%), Gaps = 3/450 (0%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V +PATGE IA V + A+++A AF SW + T AERSK L K D + + EE
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L L + GKPL E+ F+A A+ + G LP + ++P+G
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIG 120
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V I PWN+PL M K+ PALA G TVV+KPSE TPLT L AELA +PPGVVNV
Sbjct: 121 VVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELA-AEVLPPGVVNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G GDAL+ P+VR ++ TGS GKK+ AA T+K+V LELGG AP IVFDDA
Sbjct: 180 VCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ AV G A + N+GQ C A RV V E +Y++F A +AV ++VGD E
Sbjct: 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEM 299
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 432
GPL + A E+V FVE A A+VL GGRR FYEPTV++ V + + +EE+F
Sbjct: 300 GPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIF 358
Query: 433 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
GPV + F E+EAI +AND GLA+ ++T ++ R R+S L++G V VN +
Sbjct: 359 GPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAA 418
Query: 493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
P GG KQSG G++ S Y ++++ IK+V
Sbjct: 419 EMPHGGFKQSGYGKDLSIYALEDYTRIKHV 448
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 427 bits (1101), Expect = e-146
Identities = 181/460 (39%), Positives = 267/460 (58%), Gaps = 11/460 (2%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
G+IGG+W+ + G+T NPA GE IA V ++ + A+++A +AF W K+ A R
Sbjct: 1 GVIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRR 59
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ +R+ + L KE LG+L++LE GK L E +GEV ++ ++ +YG IP
Sbjct: 60 GEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIP 119
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P RL P+GV G IT +NFP+A+ AL CG TVV KPSE TPLTA+A
Sbjct: 120 SERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAV 179
Query: 237 AELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
++ + G+PPGVVN+V G D G+ L+ P+V ++FTGST VG+++ A
Sbjct: 180 TKILAEVLEKNGLPPGVVNLVTGGG-DGGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
+V LELGGN IV DDADL++AV L A +GQ C R++V E +Y++F +
Sbjct: 239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLER 298
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMT 410
KA K +++GD EG + GPLIN+AA+EK +E A S+G VL GG+R
Sbjct: 299 LVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGN 358
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR- 469
+ EPT+++ V + + +EE F P+ ++ F + EEAI + ND GL++ IFT +L+
Sbjct: 359 YVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREA 418
Query: 470 -TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 507
W + + G+V VN E+ FGG K++G GRE
Sbjct: 419 FRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 458
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 426 bits (1097), Expect = e-146
Identities = 199/458 (43%), Positives = 279/458 (60%), Gaps = 10/458 (2%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
L+VHNP GEVI V + ++A+++A + L ER L + DLL
Sbjct: 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRA 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EE ++I E GKP+K+A EVD + AEEA+R+ GE IP +R + +
Sbjct: 61 EEFAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTI 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
++PVGV AITP+NFPL ++ K+ PA+A GC VV+KP+ TPL+AL A++ ++AG+P
Sbjct: 121 REPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPE 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307
GV+ VV G +GDA +V ++FTGS AVG+ L A A G K+++LELGGNAP I
Sbjct: 181 GVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVI 238
Query: 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367
V DADL+ A+ F ++GQ C+ R+ V E +Y++F +AF AVK LKVGD
Sbjct: 239 VDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLD 298
Query: 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 427
E GPLI++ A E+VE +VE+AV GA++L GG R ++PTVL +V + +S
Sbjct: 299 EDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDG---ALFKPTVLEDVPRDTKLS 355
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 487
EE FGPV P++ + EEAI +AN T+ GL A IFT +L ++ +E LE G V VN+
Sbjct: 356 TEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDS 415
Query: 488 -LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
T+ PFGGVK+SG+GREG Y M+E E K V +
Sbjct: 416 SAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 426 bits (1098), Expect = e-146
Identities = 186/456 (40%), Positives = 273/456 (59%), Gaps = 10/456 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKE 132
V NPAT EVI G + AI++A AF++ A ER++ LR+ ++ L A KE
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 133 ELGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEII-----PATLPDRRLFV 186
EL L+ E G P+ +VD + ++A+ A E P RR+ V
Sbjct: 61 ELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRV-V 119
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
++PVGV AITPWNFP + K+ PALA G TVV+KP+ TPL+AL E+ + +P
Sbjct: 120 RREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLP 179
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 306
GVVNVV G+ +G+AL T P+V ++FTGSTAVG+++MA AA T+K+V LELGG +
Sbjct: 180 AGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSAN 239
Query: 307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366
IV DDADL A A+ N+GQ C R+LV Y++ +A + A + L VGD
Sbjct: 240 IVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPA 299
Query: 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-HSLGMTFY-EPTVLSNVKSEM 424
G V GPLI+ A ++VE ++ +GA+++ GG R L FY EPT+ ++V ++M
Sbjct: 300 DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDM 359
Query: 425 LVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 484
+++EE+FGPV ++ + ++EA+ +AND++ GL+ +++ ++ R +RV+ + G VG+
Sbjct: 360 RIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGI 419
Query: 485 NEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
N G APFGG KQSGLGRE G++EFLE K
Sbjct: 420 NGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 426 bits (1096), Expect = e-145
Identities = 200/472 (42%), Positives = 290/472 (61%), Gaps = 5/472 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLT 112
T+ I G+++DA GKT +P GEVIA+V+ ++ A+ +A AF+ W ++T
Sbjct: 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMT 63
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ERS+ L ++ DLL H +EL L T + GKP ++A EV A+ +YA A +++
Sbjct: 64 GYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIH 123
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G +PA P ++ L +P+GV G I PWNFPL M KVGPALACG T+V+KP+E TPL
Sbjct: 124 GMTLPADGP-HHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPL 182
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+AL AA+LA +AG+P GV+N+V G P G A+ + V K+ FTGST VGK +M AA
Sbjct: 183 SALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242
Query: 292 T-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+ +K V+LELGG +P IV +DAD++ AV A A F N GQ C +R V E IY++F
Sbjct: 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFV 302
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ VGD F +GV QGP ++K EK+ +++E +GA ++ GG R
Sbjct: 303 EKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGY 362
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
+ +PT+ S+VK +M ++R+E+FGPV +L FKT +E I AN++ GLAA +F+ N+
Sbjct: 363 YIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTA 422
Query: 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+S AL+ G V VN + PFGG K SG+GRE Y ++ +L++K V
Sbjct: 423 NTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAV 474
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 423 bits (1088), Expect = e-144
Identities = 200/467 (42%), Positives = 282/467 (60%), Gaps = 6/467 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G++++ G T E+ NPA GEVIA V ++ + AI++A A W+ ++ ER +
Sbjct: 2 IDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERGR 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ DL+ EEL +L TL+ GK L+E V ++D GA EF+A A + GEIIP
Sbjct: 62 ILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPL 121
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
P + +++P+GV I WN+PL + + K+ PALA G +V KPSE TPLTAL A
Sbjct: 122 GGPSF-AYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVA 180
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
E+ +AG+P GV NVV G+ ++G L+ P V K++FTG GKK+MA AAG +K V+
Sbjct: 181 EIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVT 240
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
+ELGG +P IVFDDADL AV+GA+ F ++GQ C RV V + I E+F +
Sbjct: 241 MELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERT 300
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGM-TFYE 413
+ +K+GD F E GPLI+ A +KV +++E ++GA + GG R L F E
Sbjct: 301 ERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVE 360
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PTV ++ +M + REE+FGPV +L F E+E I ANDT GLA +FT +L R RV
Sbjct: 361 PTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRV 420
Query: 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
++ LE G V +N + APFGG KQSG+GRE K + + E+K
Sbjct: 421 ADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 421 bits (1085), Expect = e-144
Identities = 186/451 (41%), Positives = 276/451 (61%), Gaps = 3/451 (0%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132
+PA G V+A + ++ A+++A AF+ W +++ AER+ L K DL+ A +E
Sbjct: 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRE 61
Query: 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L + TLE GKP+ +A GE++ A + A A+ ++G+ D VL++P+G
Sbjct: 62 RLALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG 121
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G ITPWNFP ++++K+ ALA GCTVVVKPSEFT T L AEL ++AG+P GVVN+
Sbjct: 122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNI 181
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G +G A+ P V ++FTGST VGK + A AA +KKVSLELGG P IVF DA
Sbjct: 182 VTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ A + + + N+G+ C +R+LV E I + F A + ++VGD
Sbjct: 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKV 301
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEV 431
G +IN+A L K+ +V+ ++GA +LLGG R + FY+PT+ ++V +M ++REE+
Sbjct: 302 GAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEI 361
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV +L F T +EAI +ANDT GL+A +++ ++ V+ + G V VN L +
Sbjct: 362 FGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGS 421
Query: 492 EVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
PFGG KQSG+GRE +YG++E+ E+K V
Sbjct: 422 PELPFGGFKQSGIGRELGRYGVEEYTELKTV 452
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 420 bits (1082), Expect = e-143
Identities = 209/479 (43%), Positives = 294/479 (61%), Gaps = 10/479 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SW 108
R Q IGG+W + GK + V NPAT E I ++ ++ A+ +A AF W
Sbjct: 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDW 66
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
++ T A R+K LR + K EL +L TL+ GKPL EA ++D A E+YA+ A+
Sbjct: 67 ARTTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAE 126
Query: 169 RVYG-EIIPATLPDR--RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
+ + P +LP + +VLK+P+GV G ITPWN+PL M T KV PALA GCT V+KP
Sbjct: 127 ALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 186
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
SE +T L A++ + G+PPGV+NVV G + G L + P V KI FTGSTA G+K+
Sbjct: 187 SELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M AA VK VSLELGG +P IVFDD DL+ AV A+ F +GQ C +R+LV E I
Sbjct: 247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERI 306
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR- 404
+F + K KN+K+ D EG GP++++ EKV F+ A S+GA +L GG+R
Sbjct: 307 ASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRP 366
Query: 405 HSLGMTFY-EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 463
L F+ EPT++++V + M + REEVFGPV + F TE+EAI +AND++ GLA +
Sbjct: 367 EHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVI 426
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+N+L+R RVSEA + G+V +N AP+GG+K+SG GRE ++G++ +L +K V
Sbjct: 427 SNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQV 485
|
Length = 503 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 415 bits (1070), Expect = e-141
Identities = 188/457 (41%), Positives = 269/457 (58%), Gaps = 13/457 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKE 132
V +P+TGEV A ++ G + A+ +A AF S W +L+ AER + L + L+ H +
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
EL +L +L+ GKPL +A +V+ A++ E+Y A +++GE IP P ++ +++P G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G I PWN+PL + R V PALA G VVVKP+E PLTAL AELA +AG+P G +NV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G + G AL+ P V I+FTGS G +M AA V V+LELGG +P IVF DA
Sbjct: 180 VTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL A+ + A +N+GQTC +R+LV IY++ + + + L+VG G E
Sbjct: 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPG-LEDPDL 298
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSRE 429
GPLI+ L++VE FV A ++GA+++ GGR G F PT+L +V + +++E
Sbjct: 299 GPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQE 358
Query: 430 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE--- 486
E+FGPV ++ F E EAI +AN T+ GL A ++T + R RV+ L G V VN
Sbjct: 359 EIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGA 418
Query: 487 -GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
G I PFGGVK+SG GRE + + + K V
Sbjct: 419 GGGIEL---PFGGVKKSGHGREKGLEALYNYTQTKTV 452
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-141
Identities = 191/475 (40%), Positives = 280/475 (58%), Gaps = 10/475 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+++ + G+T E +PAT EV+ +V+ G + A +A +AF W++L AAER
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIP 176
+ L K DL+ H +E+ L L+ G+PL++ +V A+ F+A++ + + G P
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ ++ PVG G ITPWN P + T K+ PALA G TVV+KP+E++PLTA
Sbjct: 124 V--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARL 181
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AE+A +AG+P GV N+V G + G AL+ P V+ ++FTG TA G +M A T+K+
Sbjct: 182 AEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLKRF 241
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
S+ELGG +P IVFDDADL A++ + F +G+ C ++R+LVQE I E F + +
Sbjct: 242 SMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVER 301
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-------GM 409
V+ ++VG GPLI+ L KV +VE A +GA +L+GG R
Sbjct: 302 VRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRG 361
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
+ PTV + + M +++EE+FGPV ++ FK EEEAI ANDT GLA Y++TN++ R
Sbjct: 362 NYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGR 421
Query: 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
RV+ ALE G++ VN + PFGGVK SG+GREG Y D + E K V L
Sbjct: 422 AHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVAL 476
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-141
Identities = 195/479 (40%), Positives = 277/479 (57%), Gaps = 17/479 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G +++A G+T EV NPATGEV+A V + + A++SA W+ +TA ERS+
Sbjct: 11 IDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSR 70
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
LR+ D+L +EL L TL+ GKP++E V ++ GA +E+YA A + GE IP
Sbjct: 71 ILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPL 130
Query: 178 TLPD----RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
RR +P+GV I WN+P+ + K PALA G ++ KPSE TPLTA
Sbjct: 131 RGGSFVYTRR-----EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
L AE+ +AG+P GV NVV G+ +G L P + K++FTG GKK+MA AA ++
Sbjct: 186 LKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASL 244
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 353
K+V++ELGG +P IVFDDADL+ A + A+ A F +SGQ C RV VQ+ I F
Sbjct: 245 KEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARL 304
Query: 354 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---- 409
+ V+ +++GD GPL++ A +KV ++E ++GA++L GG R + G
Sbjct: 305 LERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANG 364
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
F PTV ++ +M + REE+FGPV +L F E+E I ANDT GLAA +FT +L R
Sbjct: 365 AFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSR 424
Query: 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK--YVCLGD 526
RV LE G+ +N S P GG KQSG+GRE ++ + +IK V +G
Sbjct: 425 AHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVEMGP 483
|
Length = 488 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 412 bits (1062), Expect = e-140
Identities = 194/460 (42%), Positives = 266/460 (57%), Gaps = 16/460 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWYDLLMAH 130
LEV NP TGEV+ V T++A+ A A + S LT +RS L K LL A
Sbjct: 1 LEVRNPYTGEVVGTVP----AGTEEALREALALAASYRSTLTRYQRSAILNKAAALLEAR 56
Query: 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFV 186
+EE +LITLE G LK+ EV A + F A EA R GE A R++F
Sbjct: 57 REEFARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFT 116
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
L++P+GV AITP+N PL + K+ PA+A +V+KPSE TPL+A+ A+L +AG+P
Sbjct: 117 LREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLP 176
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 306
P +++VV G +IGD L+T P V +TFTG AVGK + A A K+ LELGGN P
Sbjct: 177 PDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGY--KRQLLELGGNDPL 234
Query: 307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366
IV DDADL A A+A + NSGQ C R+LV E + ++F D + L VGD
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLV 426
G +I++ A ++E VE+A+++GA+VLLG +R Y PTVL +V + +
Sbjct: 295 DPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQG---ALYAPTVLDHVPPDAEL 351
Query: 427 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 486
EE FGPVAP++ K +EAI ++N T GL++ + TN+L R+ E L+ G V VNE
Sbjct: 352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNE 411
Query: 487 GL-ISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 524
+E++PFGGVK SGLG +EG + M E +K L
Sbjct: 412 VPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 413 bits (1062), Expect = e-140
Identities = 198/469 (42%), Positives = 288/469 (61%), Gaps = 7/469 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAER 116
I G+++D+ G T++V+NP+TG++I ++ + A+ A AF W K++ ++R
Sbjct: 11 INGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKR 70
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEII 175
+ L K DL+ + + L + L+ GK A +V A +Y A +++G++I
Sbjct: 71 GRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVI 130
Query: 176 PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA 235
T + + +P+GV G I PWNFPL M K+ PALA G T+V+KPSE TPL+AL
Sbjct: 131 -ETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALY 189
Query: 236 AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VK 294
+L +AG PPGV+NVV G G+A+ + + K+ FTGST VG+K+M AA + +K
Sbjct: 190 MTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLK 249
Query: 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354
KV+LELGG +P IVFDDADL AV F N GQ C +R+ VQEGIY+KF F
Sbjct: 250 KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFK 309
Query: 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 414
+ K LKVGD F E QGP +++ E++ +++E ++GA V GG+RH F EP
Sbjct: 310 EKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEP 369
Query: 415 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 474
T+ ++V +M + +EE+FGPV ++ FKTEEEAI AND+ GLAA +FTNN+ RV+
Sbjct: 370 TIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVA 429
Query: 475 EALEYGLVGVN-EGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
AL+ G V VN L+ +V PFGG KQSG+GRE +Y ++ + +IK V
Sbjct: 430 NALKAGTVWVNCYNLLHHQV-PFGGYKQSGIGRELGEYALENYTQIKAV 477
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 410 bits (1055), Expect = e-139
Identities = 176/435 (40%), Positives = 249/435 (57%), Gaps = 10/435 (2%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+ +A AF +WSK +ER L K DLL + ++E + + E G A
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFN 60
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
VD A + A ++ G IP+ P V+K+PVGV I PWN P+ + TR +
Sbjct: 61 VDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIA 120
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQ 269
LA G TVV+K SE +P T + +AG+P GV+NVV +AP++ +AL+ P
Sbjct: 121 YPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPA 180
Query: 270 VRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329
VRK+ FTGST VG+ + AA +K V LELGG AP IV +DADL+ A N AL F NS
Sbjct: 181 VRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240
Query: 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
GQ C+ R++V E I ++F + A + L G VV G L++ AA ++V+ V+
Sbjct: 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVKELVD 295
Query: 390 DAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448
DA+SKGAK+++GG S T PT+L NV +M + EE FGPV ++ K EEEA+
Sbjct: 296 DALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAV 355
Query: 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFGGVKQSGLGRE 507
+AND+ GL+A +FT +L R V++ +E G V +N + E P GGVK SG GR
Sbjct: 356 RIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTVHDEPTLPHGGVKSSGYGRF 415
Query: 508 GSKYGMDEFLEIKYV 522
K+G+DEF E K++
Sbjct: 416 NGKWGIDEFTETKWI 430
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-139
Identities = 187/456 (41%), Positives = 265/456 (58%), Gaps = 15/456 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
LEV NP TGEV+A V+ G + ++AI++A AF L A R+ L L
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP----ATLPDRRLFVL 187
EEL + I LE GKP+K+A GEV AEEA R+YGE++P A R+ V
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 188 KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP 247
+ P+G AITP+NFPL ++ KV PA+A GC V+KP+ TPL+AL E+ + G+P
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPK 180
Query: 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307
G +V+ + D D L+T +++ ++FTGS AVG L A AG KKV LELGGNA I
Sbjct: 181 GAFSVLPCSRDD-ADLLVTDERIKLLSFTGSPAVGWDLKA-RAGK-KKVVLELGGNAAVI 237
Query: 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367
V DADL+ A + F +GQ+C+ RVLV +Y++F VK LK GD
Sbjct: 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKD 297
Query: 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS 427
+ GP+I+++ E+VE +V +AV GAK+L GG+R EPT+L +V +M V+
Sbjct: 298 DATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDG---ALLEPTILEDVPPDMEVN 354
Query: 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG 487
EEVFGPV + + +EA+ ND+ GL A +FT +L++ R + LE G V +N+
Sbjct: 355 CEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVIND- 413
Query: 488 LIST---EVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
+ T + P+GGVK SG+GREG +Y ++E E +
Sbjct: 414 -VPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPR 448
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 406 bits (1045), Expect = e-138
Identities = 183/434 (42%), Positives = 255/434 (58%), Gaps = 16/434 (3%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 155
A+ A AF +W K + AER+ LRK DLL K+EL +LITLE GKP+ EA EV+
Sbjct: 3 AALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEK 62
Query: 156 GAKFIEFYAEEAKRVYGEIIPATLPDRRL-------FVLKQPVGVAGAITPWNFPLAMIT 208
A +YAE A A L D + +V +P+GV I PWNFP +
Sbjct: 63 CAWICRYYAENA--------EAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVF 114
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
R P L G TV++K + P ALA EL +AG P GV ++ ++ + +A++ P
Sbjct: 115 RFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQV-EAIIADP 173
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 328
+VR +T TGS G+ + A A +KK LELGG+ P IV DDADL+ AV A+ + +N
Sbjct: 174 RVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQN 233
Query: 329 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388
+GQ+C+ A R +V E +Y++F + F +A+ LKVGD E GPL K +++ V
Sbjct: 234 AGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQV 293
Query: 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448
E+AV+ GA +LLGG+R FY PTVL++V M EE+FGPVA ++ K EEEAI
Sbjct: 294 EEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAI 353
Query: 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREG 508
+AND+ GL +FT +L+R RV+ LE G+V +N + S PFGGVK+SG GRE
Sbjct: 354 ALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGYGREL 413
Query: 509 SKYGMDEFLEIKYV 522
++G+ EF+ IK V
Sbjct: 414 GRFGIREFVNIKTV 427
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 404 bits (1041), Expect = e-137
Identities = 179/464 (38%), Positives = 279/464 (60%), Gaps = 5/464 (1%)
Query: 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGL 120
G+W D +T++V NP TGE +A + ++ +A +A A W+ ER++ L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 121 RKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP 180
K +L ++E+ + + E G +A E A R+ G I+P+ +P
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAEL 239
+ V ++P+GV G I+PWNFPL + R V PALA G VV+KP+ TP+T L A++
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI 180
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
+AG+P GV+NVV+G +IGDA + P R I+FTGST VG+ + A +KKV+LE
Sbjct: 181 FEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGGN P +V +DAD++ AVN A+ KF + GQ C+ NR++V E +Y++F + F + VK
Sbjct: 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKA 300
Query: 360 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 419
L GD V GPLIN++ ++ + +E AV +GA +L+GG + EPTVLS+
Sbjct: 301 LPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVL---EPTVLSD 357
Query: 420 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 479
V ++M ++REE+FGPVAP++ EEEA+ +ANDT GL+ +FT++L+R + + ++
Sbjct: 358 VTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDA 417
Query: 480 GLVGVNEGLISTE-VAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
G+ +N+ ++ E PFGG K SGLGR ++ ++EF K++
Sbjct: 418 GMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWI 461
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 400 bits (1031), Expect = e-136
Identities = 183/453 (40%), Positives = 250/453 (55%), Gaps = 7/453 (1%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NPATGEV+ V E A++ A A +W+ L R++ L +W L H +EL
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIP--ATLPDRRLFVLKQPV 191
+L+ E GKP +A EV + I++ A A RV +P +P+++ V +P
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPY 120
Query: 192 GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251
GV G I+PWN+PL + PALA G VV+KPSE TPL AE AG P GV+
Sbjct: 121 GVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQ 180
Query: 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311
VV G+ G AL+ + V K+ FTGS A G+K+MA AA + V LELGG P IV D
Sbjct: 181 VVTGDGA-TGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLAD 238
Query: 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371
ADL A A+ N+GQTC+ RV V E +Y++F + L+ G
Sbjct: 239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDAD 298
Query: 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 431
GP+ L+ V V+DAV+KGAK L GG R + G FYEPTVL++V +M V REE
Sbjct: 299 IGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREET 358
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV P++ E+EAI +AND+ GL+A +F+ +L R ++ LE G V +N+ L++
Sbjct: 359 FGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTA 418
Query: 492 EV--APFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ PFGGVK SG GR G+ EF K +
Sbjct: 419 GIPALPFGGVKDSGGGRRHGAEGLREFCRPKAI 451
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 400 bits (1030), Expect = e-134
Identities = 208/473 (43%), Positives = 295/473 (62%), Gaps = 7/473 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLT 112
TQ LI G+++DA GKT +P TGEVIA+V+ ++ A+++A AF+ W K+T
Sbjct: 58 TQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMT 117
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVY 171
A ERS+ L ++ DLL H +EL L T + GKP +++ E+ A+ +YA A +++
Sbjct: 118 AYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIH 177
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G +PA P + L +P+GVAG I PWNFPL M KVGPALACG T+V+K +E TPL
Sbjct: 178 GLTVPADGP-HHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPL 236
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+AL AA+L +AG+PPGV+NVV G P G AL + V K+ FTGST GK ++ AA
Sbjct: 237 SALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAK 296
Query: 292 T-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+ +K V+LELGG +P IV +DAD++ AV A A F N GQ C +R V E +Y++F
Sbjct: 297 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFV 356
Query: 351 D-AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
+ A ++A+K + VGD F +GV QGP I+ EK+ +++ V GA + GG R
Sbjct: 357 EKAKARALKRV-VGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKG 415
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
+ +PTV SNV+ +ML++++E+FGPV +L FK +E I AN+T GLAA +FT NL
Sbjct: 416 YYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDT 475
Query: 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+S AL G V VN + PFGG K SG+GRE Y ++ +L++K V
Sbjct: 476 ANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAV 528
|
Length = 538 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 396 bits (1020), Expect = e-133
Identities = 201/475 (42%), Positives = 292/475 (61%), Gaps = 11/475 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFN--SWSKL 111
T+ I G+++DA GKT E +P TGEVIA ++ G KE D A+ +A +AF+ W ++
Sbjct: 21 TKLFINGEFVDAASGKTFETRDPRTGEVIARIA-EGDKEDVDLAVKAAREAFDHGPWPRM 79
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGK-PLKEAVGEVDYGAKFIEFYAEEAKRV 170
+ ER + + K+ DL+ H EEL L T++ GK ++ A + +YA A ++
Sbjct: 80 SGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKI 139
Query: 171 YGEIIPATLPDRRL--FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+GE + + R+L + LK+P+GV G I PWNFP M KV PALA GCT+VVKP+E
Sbjct: 140 HGETLKMS---RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQ 196
Query: 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM-A 287
TPL+AL A LA AG+P GV+NVV G P G A+ + V K++FTGST VG+K+M A
Sbjct: 197 TPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQA 256
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
A +K+VSLELGG +P ++FDDAD+++AV+ AL F N G+ CV ++RV VQEGIY+
Sbjct: 257 AATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYD 316
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + K+ VGD F QGP ++K EK+ +++E +GA +L GG+
Sbjct: 317 EFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD 376
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
+ EPT+ ++V +M ++++E+FGPV L+ FKT EEAI AN+T GLAA I T +L
Sbjct: 377 KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDL 436
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
VS ++ G + VN PFGG K SG GR+ +D++L++K V
Sbjct: 437 DVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSV 491
|
Length = 501 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 394 bits (1013), Expect = e-133
Identities = 179/455 (39%), Positives = 260/455 (57%), Gaps = 8/455 (1%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEE 133
+PATGEVI + G E + AI++A AF+ W+ R++ L + D A+ E
Sbjct: 3 DPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAER 61
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L +L+ LE GK L EA E+ + +YA A+ G +I P VL++P+GV
Sbjct: 62 LARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPE-PGSFSLVLREPMGV 120
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE-LALQAGIPPGVVNV 252
AG I PWN P+ ++ R + PALA GCTVVVKP+ T A LA +P GVVN+
Sbjct: 121 AGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNL 180
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
+ + L+ SP V I+FTGSTA G+ +MA AA T+K++ LELGG PCIVFDDA
Sbjct: 181 FTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFDDA 240
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ A+ A +GQ C+ +RVLVQ I ++ D + + +KVG G
Sbjct: 241 DLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDM 300
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---FYEPTVLSNVKSEMLVSRE 429
GPLI++A +++V+ VE A++ GA+V+L G + G+ F PT+L + + +E
Sbjct: 301 GPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQE 360
Query: 430 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 489
E+FGPV L F E EA+ +ANDT+ GLAA ++T +L R RV+ A+ G V +N+
Sbjct: 361 EIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNK 420
Query: 490 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
A GG +QSGLGR +++F+E K++ L
Sbjct: 421 LFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 390 bits (1003), Expect = e-131
Identities = 180/463 (38%), Positives = 254/463 (54%), Gaps = 17/463 (3%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK-LTAAER 116
LI G+W ++ GKT+EV++P GEVI +V + E +A +A+DA W + ER
Sbjct: 5 LINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEER 63
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
L K+ DLL +KEE+ L+ E GK LK+A+ EVD +I EE KR+ G+ +P
Sbjct: 64 IDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLP 123
Query: 177 ATLPDRRLFVL----KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232
+ ++P+GV AI P+N+PL + K+ PAL G TVV KP+ L
Sbjct: 124 GDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLL 183
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
+ AE AG P GVVNVV G +IGD L+T ++ I+FTGST VG +L
Sbjct: 184 GIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK--QHP 241
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
+K++ LELGG P IV DADL +A + SGQ C RVLV E + ++ +
Sbjct: 242 MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVEL 301
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412
+ V LKVG + GV PLI+ + + VE ++DAV+KGA VL GG R G
Sbjct: 302 LKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGR--EGGNLI 359
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PT+L V +M ++ EE FGPV P++ EEAI +AN +N GL A IFT ++ + +
Sbjct: 360 YPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARK 419
Query: 473 VSEALEYGLVGVNEGLISTE----VAPFGGVKQSGLGREGSKY 511
+++ALE G V +N + PF G K SG+G +G
Sbjct: 420 LADALEVGTVNINS---KCQRGPDHFPFLGRKDSGIGTQGIGD 459
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 389 bits (1002), Expect = e-131
Identities = 184/473 (38%), Positives = 272/473 (57%), Gaps = 8/473 (1%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERS 117
I G+ + K L++ NPAT +VIA+V+ + A++SA+ AF S W+K T AER
Sbjct: 4 IDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + DL+ H EEL QL TL GK + + EV A F+ ++A A ++ GE +
Sbjct: 64 RILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLA 123
Query: 177 ATLPDRR-----LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
++P + F ++PVGV I PWNF + + K+G ALA GCT+V+KPSEFTPL
Sbjct: 124 PSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPL 183
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
T L AELA +AGIP GV+NVV G +G L++ P V K++FTGS A GKK+ AA
Sbjct: 184 TLLRVAELAKEAGIPDGVLNVVNGKG-AVGAQLISHPDVAKVSFTGSVATGKKIGRQAAS 242
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
+ +V+LELGG DAD++ V G L A F + GQ C R V +++
Sbjct: 243 DLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVT 302
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
+A+ + +VG E V+ GPL N+ +KV ++++DA ++G +++ GG + F
Sbjct: 303 KLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYF 362
Query: 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471
+PT++ ++ + REE FGPV + ++ EEE I + NDT GL A ++TNNL +
Sbjct: 363 VQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKAL 422
Query: 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
R +E G V VN PFGG+KQSG+GRE +D++ E+K V +
Sbjct: 423 RYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMI 475
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 377 bits (969), Expect = e-127
Identities = 169/406 (41%), Positives = 246/406 (60%), Gaps = 1/406 (0%)
Query: 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179
LRK + E+ LI E GK + A EV + A +I++ AE A+R GEII +
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239
P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFTP A+A A++
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 120
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
+ G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA AA + KV LE
Sbjct: 121 VDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLE 180
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGG AP IV DDADL++AV + ++ NSGQ C CA RV VQ+GIY++F + +A++
Sbjct: 181 LGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240
Query: 360 LKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS 418
++ G+ + GPLIN AALE+VE V AV +GA+V LGG+ +Y PT+L
Sbjct: 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLL 300
Query: 419 NVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 478
+V+ EM + EE FGPV P++ F T EEAI MAND++ GL + I+T NL + + L+
Sbjct: 301 DVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLK 360
Query: 479 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 361 FGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 406
|
Length = 409 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 381 bits (980), Expect = e-127
Identities = 188/463 (40%), Positives = 255/463 (55%), Gaps = 18/463 (3%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
R + L +D G T EV P TGE +A V + + A + A A +W+
Sbjct: 18 RLRRLTAR--VDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPV 75
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA------ 167
ER+ L +++DL++ ++EEL L+ LE GK + A EV A +YA A
Sbjct: 76 RERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAP 135
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+R G + T + L+QP GV G I+PWN+PL + PAL G VV+KP
Sbjct: 136 RRRAGALPVLT----KTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDS 191
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
TPLTALAA EL +AG+P + VV G P +G AL+ + FTGSTA G+ L
Sbjct: 192 QTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALV--DNADYLMFTGSTATGRVLAE 249
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
A + SLELGG P IV DDADL+ A GA+ A F N+GQ C+ R+ V E IY+
Sbjct: 250 QAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYD 309
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS 406
+F AF AV+ +++G G+ G LI++A LE V V+DAV+KGA VL GG+ R
Sbjct: 310 EFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPD 369
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
LG FYEPTVL+ V +M ++REE FGPV + +EA+ ANDT GL A ++T +
Sbjct: 370 LGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGD 429
Query: 467 LQRTWRVSEALEYGLVGVNEGLIST---EVAPFGGVKQSGLGR 506
R ++ + G V VNEG + AP GG+K SGLGR
Sbjct: 430 TARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR 472
|
Length = 524 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-127
Identities = 179/480 (37%), Positives = 263/480 (54%), Gaps = 26/480 (5%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+W+ G+ + +NP G+V+ + ++ A+ +A +AF +W K + AER+
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKR 169
L K D + + E L TL+ GKP++E A+ Y A I A+E
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIR--AQEGSL 121
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
EI TL + +P+GV G I PWNFPL M K+ PALA G TVV+KP+ T
Sbjct: 122 S--EIDEDTLS----YHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQT 175
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PL+ L EL + +P GVVNVV G + G L + P++ K+ FTGST VG+ +M A
Sbjct: 176 PLSILVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYA 234
Query: 290 AGTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 344
A + V+LELGG +P I FDDA D + N G+ C C +R LVQE
Sbjct: 235 AENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQES 294
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
IY++F + + + +KVG+ + G ++K LEK+ ++V+ +GA+VL GG R
Sbjct: 295 IYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGER 354
Query: 405 HSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 460
+LG FYEPT++ ++M + +EE+FGPV ++ FK EEEAI +ANDT GL
Sbjct: 355 LTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGG 414
Query: 461 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
++T ++ R RV+ ++ G V VN APFGG K+SG+GRE K +D + + K
Sbjct: 415 GVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 378 bits (973), Expect = e-127
Identities = 183/470 (38%), Positives = 274/470 (58%), Gaps = 11/470 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I G+W+ G+T++ +NPA GE ++ ++ + A+ +A +AF +W K T AER+
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
L K D++ +KE L + TL+ GKP++E ++ A ++A + G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGS--- 120
Query: 177 ATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
A + D VL++P+GV G I PWNFP M K+ PALA G TVV+KPS T L+ L
Sbjct: 121 ANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
A++ +Q +P GVVN+V G G+ LL P + K+ FTGST VG+ + AA +
Sbjct: 181 ELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239
Query: 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354
+LELGG + I+FDDA+ + A+ GA N GQ C +R+ VQEGIY++F
Sbjct: 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLK 299
Query: 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT---- 410
+ +N+KVG+ G +NK L+K+ ++V+ A +GAK+L GG R +
Sbjct: 300 EKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGF 359
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
F EPT++ NV ++M V++EE+FGPVA ++ FKTE+E I MAND+ GL +FT ++ R
Sbjct: 360 FIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRA 419
Query: 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
RV+ A+E G V VN APFGG K+SG+GRE K +D + ++K
Sbjct: 420 LRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 370 bits (953), Expect = e-124
Identities = 190/457 (41%), Positives = 261/457 (57%), Gaps = 10/457 (2%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATG+VI V + A+++A AF W+ A ER K L + D L A EE
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 134 LGQLITLEQGKPLK-EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVG 192
L +L+ LE G L+ +A E A ++ A + GE +P PD + +++P+G
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLG 119
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V GAI PWN PL + K+ PAL G TVV+K +E PL L AE+ L +P GV+NV
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEI-LAQVLPAGVLNV 178
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
+ G + G AL+ P V K+TFTGST VGK + AA + VSLELGG +P IVF DA
Sbjct: 179 ITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238
Query: 313 DLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371
DL+ AV+GA+A +F GQ+C +R+ V E IY+ F + + LK+GD E
Sbjct: 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATD 298
Query: 372 QGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMT----FYEPTVLSNVKSEMLV 426
G +I++ KV +++ +S GA VL GG G F +PT+ S V +E +
Sbjct: 299 IGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRL 358
Query: 427 SREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE 486
+REE+FGPV + +K E+E I MAND++ GLAAY++T +L R R + ALE G V VN+
Sbjct: 359 AREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQ 418
Query: 487 GLISTEVAPFGGVKQSGLGREGSKYGM-DEFLEIKYV 522
G +GG KQSGLGRE S GM + F + K V
Sbjct: 419 GGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTV 455
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 369 bits (950), Expect = e-123
Identities = 179/480 (37%), Positives = 278/480 (57%), Gaps = 15/480 (3%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLT 112
Q I G+++DA GKT NP G VI VS ++ A+++A +AF + W K+
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGK----PLKEAVGEVDYGAKFIEFYAEEAK 168
A +R + + + DL+ H+EEL + +L+ G LK VG + ++A
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVG---MSIQTFRYFAGWCD 122
Query: 169 RVYGEIIPAT--LPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ G+ IP P+R L ++P+GV G + PWN+PL M+ K+ LA G TVV+KP
Sbjct: 123 KIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKP 182
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
++ TPLTAL AEL ++AG P GV+N++ G+ +G L P VRK+ FTGST +GK +
Sbjct: 183 AQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHI 242
Query: 286 MAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 344
M A +KKVSLELGG +P I+F D D++ AV +++ F N G+ C+ A R+ V+E
Sbjct: 243 MKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEES 302
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
I+++F + VK +K+GD GP +KA L+K+ + E V +GA ++ GG++
Sbjct: 303 IHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQ 362
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYI 462
F+EPTV ++V+ M +++EE FGP+ + F + + ANDT GLA+ +
Sbjct: 363 VDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGV 422
Query: 463 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
FT ++ + VS+ LE G V VN + APFGG KQSG G++ + ++E+L+ K V
Sbjct: 423 FTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTV 482
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 365 bits (939), Expect = e-121
Identities = 168/469 (35%), Positives = 249/469 (53%), Gaps = 15/469 (3%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 114
+ I G+W+++ + L+V+NPATGEVIA V +E A+++A AF +WS
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 174
+R + + K+ LL + +EL +LITLE GK L +A G+V G + +EF + GE
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLTA 233
+ + +QP+GV ITP+NFP AMI A+ACG T V+KPSE P A
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFP-AMIPLWMFPMAIACGNTFVLKPSERVPGAA 179
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ AEL +AG+P GV+NVV G + +ALL P ++ ++F GST VG+ + AA
Sbjct: 180 MRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANG 238
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 353
K+V G +V DADL N + A F +GQ C+ + + +++
Sbjct: 239 KRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKL 298
Query: 354 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 413
+ K LKVG G G GP+I+ AA E++E +E V +GAK++L GR + YE
Sbjct: 299 VERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVK--VPGYE 356
Query: 414 ------PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
PT+L NV +M + +EE+FGPV ++ T +EAI + N G A IFT +
Sbjct: 357 NGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSG 416
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 514
+ ++ G+VG+N I +A FGG K S G + YG D
Sbjct: 417 AAARKFQREVDAGMVGINVP-IPVPLAFFSFGGWKGSFFG-DLHFYGKD 463
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-121
Identities = 175/454 (38%), Positives = 249/454 (54%), Gaps = 8/454 (1%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
P TGE + + + + A + A A +W+ AER+ +++DL++ ++EL
Sbjct: 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDEL 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIPATLPD-RRLFVLKQPVG 192
LI LE GK + A EV A +YA A+R+ +P R V ++P G
Sbjct: 61 LDLIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKG 120
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V G I+PWN+PL + PAL G VV+KP T LTAL A EL ++AG+P + V
Sbjct: 121 VVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQV 180
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
V G ++G A++ + FTGSTA G+ + A + SLELGG P IV +DA
Sbjct: 181 VTGPGSEVGGAIVD--NADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ A GA+ A F N+GQ CV R+ V E +Y++F F + L++G G
Sbjct: 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDM 298
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEV 431
G LI++A L++V V+DAV+KGA VL GGR R LG FYEPTVL+ V +M + EE
Sbjct: 299 GSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEET 358
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV + ++EAI +ANDT+ GL A ++T + R R++ L G V VNEG +
Sbjct: 359 FGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAA 418
Query: 492 EV---APFGGVKQSGLGREGSKYGMDEFLEIKYV 522
AP GG+K SGLGR G+ ++ E + V
Sbjct: 419 WASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTV 452
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 362 bits (931), Expect = e-120
Identities = 183/461 (39%), Positives = 273/461 (59%), Gaps = 13/461 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I GKW+ + K+ NPATGEV+A+V ++ A+++A AF SWS L R++
Sbjct: 26 INGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRAR 85
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L + + H+ L +L+ GKP++E+ ++ A+ +A + +++
Sbjct: 86 HLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHA-----GWAQLLDT 140
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
L +PVGV G I PWNFPL M+ K+ PALA G TVV+KP+E+TPLTAL A
Sbjct: 141 ELAGW------KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFA 194
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
E+ +AG+PPGV+N+V GN G AL P V K+ FTGST VG+ L AGT KK+S
Sbjct: 195 EICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLS 253
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LELGG +P IVFDDADL+ AV G + A + N GQ C +R+LVQE + E+ + +
Sbjct: 254 LELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERM 313
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL 417
+L+VGD + + G +++ A L+++ VE+ ++GA V G FY PT+
Sbjct: 314 SHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLF 373
Query: 418 SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 477
+NV +++EE+FGPV +L F+T +EA+ +AN+T GLAA +++ NL V+ +L
Sbjct: 374 TNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSL 433
Query: 478 EYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 518
+ G+V +N + A FGG ++SG GREG K G+ E+L
Sbjct: 434 KAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLR 474
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 357 bits (918), Expect = e-118
Identities = 183/480 (38%), Positives = 253/480 (52%), Gaps = 13/480 (2%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAA 114
+ I G ++++ GKT NP G VIA V G E A+++A A W K+T A
Sbjct: 2 RNFINGAFVES--GKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVA 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGE 173
ER+ L D + ++ + GKP A ++ GA +A+ K E
Sbjct: 60 ERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTE 119
Query: 174 IIPATLPDRRL---FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
PD + + +++P+GV G I+PWN PL ++T KVGPALACG TVVVKPSE TP
Sbjct: 120 CFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETP 179
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS-PQVRKITFTGSTAVGKKLMAGA 289
TA E+ G+P GV NVV G PD LT P V ITFTG T G +M A
Sbjct: 180 GTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239
Query: 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
A VK VS ELGG IVF D D + AV G L + F N+GQ C+ RV V+ I+++F
Sbjct: 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRF 299
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
A ++LK+G GPLI+ +KV ++ AV +GA V+ GG G
Sbjct: 300 VAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGD 359
Query: 410 -----TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
+ +PT+ + + V EE+FGP + F +EEE I +ANDT GLAA ++T
Sbjct: 360 ALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWT 419
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+L R RV+ +E G+V VN + PFGG K SG+GREG + ++ + E+ VC+
Sbjct: 420 EDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 354 bits (910), Expect = e-118
Identities = 172/446 (38%), Positives = 247/446 (55%), Gaps = 8/446 (1%)
Query: 80 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLIT 139
G V+ V + A + A A +W+ ER+ LR+ DLL H +E+ I
Sbjct: 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIV 60
Query: 140 LEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 199
E G +A EV + A + GEI+P+ P R + P+GV G I+P
Sbjct: 61 RESGSIRPKAGFEVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISP 119
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAP 258
+NFPL + R V PALA G VV+KP TP++ + A L +AG+P GV++V+ G
Sbjct: 120 FNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG-GA 178
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 318
D G+AL+ P V I+FTGSTAVG+K+ A +KKVSLELGG IV DDADL++A
Sbjct: 179 DAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAA 238
Query: 319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 378
+ F + GQ C+ A R LV E + + + + K+L VGD V GPLIN
Sbjct: 239 SNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINA 298
Query: 379 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438
L++V V+D+V+ GA++ GG L FY PTVLS VK M EE+FGPVAP+
Sbjct: 299 RQLDRVHAIVDDSVAAGARLEAGGTYDGL---FYRPTVLSGVKPGMPAFDEEIFGPVAPV 355
Query: 439 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE-VAPFG 497
F ++EEA+ +ANDT GL+A I + ++ R +++ L G++ +N+ ++ E PFG
Sbjct: 356 TVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFG 415
Query: 498 GVKQSGLG-REGSKYGMDEFLEIKYV 522
G+ SG G R G +EF + ++V
Sbjct: 416 GMGASGNGSRFGGPANWEEFTQWQWV 441
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 343 bits (882), Expect = e-113
Identities = 178/473 (37%), Positives = 266/473 (56%), Gaps = 8/473 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
+ + I G++ A + +T E +P T +A ++ + A+S+A F WS
Sbjct: 18 IENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSL 77
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKR 169
+ A+R L K DL+ AH EEL L TL+ GKP++ ++ ++ A+ I +YAE +
Sbjct: 78 SSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDK 137
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
VYGE+ T ++++PVGV AI PWNFPL + K+GPALA G +V++KPSE +
Sbjct: 138 VYGEVAT-TSSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKS 196
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PL+A+ A LA +AG+P GV+NVV G + G AL + I FTGST GK+L+ A
Sbjct: 197 PLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDA 256
Query: 290 AGT-VKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
+ +K+V LE GG + IVF D DL A + A F N GQ C+ R+L++E I +
Sbjct: 257 GDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIAD 316
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+F + +N + G G LI+ A + V +F+ + SKG ++LL GR L
Sbjct: 317 EFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAGL 375
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
PT+ +V +SREE+FGPV + F +EE+A+ +AND+ GL A ++T +L
Sbjct: 376 -AAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDL 434
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
R R+S L+ G V VN PFGG KQSG GR+ S + +++F E+K
Sbjct: 435 SRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELK 487
|
Length = 494 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 343 bits (883), Expect = e-113
Identities = 172/517 (33%), Positives = 262/517 (50%), Gaps = 28/517 (5%)
Query: 23 PSMQSYTPAFSRQMSVGMKSVTDRL-RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TG 80
P + V + L R+ L+ IGGK + + +E NPA
Sbjct: 5 PFTDFADEENRAAFRAALARVREELGREYPLV-----IGGKEVRT--EEKIESRNPADPS 57
Query: 81 EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 140
EV+ V +E + A+ +A AF +W + ER++ L + LL + EL + L
Sbjct: 58 EVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRRFELAAWMVL 117
Query: 141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PATLPDRRLFVLKQPVGVAGAITP 199
E GK EA +V F+E+YA E R+ G + D R +P+GV I+P
Sbjct: 118 EVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVY--RPLGVGAVISP 175
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD 259
WNFPLA++ AL G TVV+KP+E TP+ A E+ +AG+PPGVVN + G +
Sbjct: 176 WNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEE 235
Query: 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCIVFDDAD 313
+GD L+ P VR I FTGS VG ++ AA +K+V E+GG IV +DAD
Sbjct: 236 VGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDAD 295
Query: 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373
L+ A G + + F GQ C +RV+V E +Y++F + + K LKVGD V G
Sbjct: 296 LDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMG 355
Query: 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSLGMTFYEPTVLSNVKSEMLVSREEV 431
P+I+K A +++ ++E S+G ++LLGG + F +PT+ ++V + +++EE+
Sbjct: 356 PVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEI 414
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV ++ K +EA+ +ANDT GL +F+ + + R E G + N T
Sbjct: 415 FGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRK--IT 472
Query: 492 ----EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 523
PFGG K SG G + G + +F++ K V
Sbjct: 473 GALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPKTVT 509
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 340 bits (874), Expect = e-112
Identities = 166/454 (36%), Positives = 245/454 (53%), Gaps = 7/454 (1%)
Query: 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133
V NPATG+V+A V + A+++A AF W T ER++ LR+ L H EE
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGV 193
L + L+ G P+ +G+V A ++++A + GE IP + L++P GV
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGV 119
Query: 194 AGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253
I +N PL K+ LA G TVVVKP E PL+AL AELA + +PPGV N++
Sbjct: 120 VARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNIL 178
Query: 254 MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313
G+ G AL+ P V++I GS G+ +M AA +K V+LELGG IVF DAD
Sbjct: 179 PGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238
Query: 314 LNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
A + A+A F GQ+C +R+ V E IY++ + V +KVGD
Sbjct: 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTM 298
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFY-EPTVLSNVKSEMLVSR 428
GPL+++ ++V +++ A +GA+++ GG R +L FY EPTV ++V M ++R
Sbjct: 299 GPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAR 358
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488
EE+FGPV +L ++ E E + AN GL A I+TN++ + R + +E G V +N
Sbjct: 359 EEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSS 418
Query: 489 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
APFGGVK SG+GRE + + + K V
Sbjct: 419 RHFLGAPFGGVKNSGIGREECLEELLSYTQEKNV 452
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 333 bits (855), Expect = e-109
Identities = 148/449 (32%), Positives = 222/449 (49%), Gaps = 4/449 (0%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
+P G VIA + + A+ A A W + ER + + +LL A+ +E+
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 194
+ +T + G+P+ +A GE+ + + A+ +I ++ ++P+GV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 195 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254
I PWN+P V PAL G V++K S TPL A +AG+P GV V+
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 314
+ AL+ P++ ++FTGS A G+ + AAG KV LELGG P V DADL
Sbjct: 181 LSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239
Query: 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374
+ A + F NSGQ+C R+ V E IY+ F +AF VK K+GD GP
Sbjct: 240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGP 299
Query: 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSL---GMTFYEPTVLSNVKSEMLVSREEV 431
+++ A + V + DA++KGA+ L+ G G + PTVL+NV M V REE
Sbjct: 300 VVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREET 359
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491
FGPV ++ K++ EAI + ND+ GL A ++T ++ R + E LE G V +N
Sbjct: 360 FGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLD 419
Query: 492 EVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
+ GVK SG G S+ G D+ K
Sbjct: 420 PALAWTGVKDSGRGVTLSRLGYDQLTRPK 448
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 326 bits (836), Expect = e-106
Identities = 169/467 (36%), Positives = 257/467 (55%), Gaps = 4/467 (0%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
LI G+ + +G+ V+NPATGEVI ++ ++ A+ +A AF W + T R+
Sbjct: 5 LINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L K D++ + + +L + GKPL E+ F+A A+ + G
Sbjct: 64 ECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAG 123
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPLTAL
Sbjct: 124 EYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKL 183
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AELA P GVVN++ G +GD L +VR ++ TGS A G+ +++ A ++K+
Sbjct: 184 AELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRT 242
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
+ELGG AP IVFDDAD++ V G F N+GQ C A R+ Q GIY+ + A
Sbjct: 243 HMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAA 302
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPT 415
V LK G E GPL + A LE+V VE+A + G KV+ GG + ++ PT
Sbjct: 303 VATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPT 362
Query: 416 VLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 475
+L+ K + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R R+S
Sbjct: 363 LLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSA 422
Query: 476 ALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
L+YG VN + P GG K SG G++ S YG++++ ++++
Sbjct: 423 RLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHI 469
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 325 bits (835), Expect = e-106
Identities = 180/468 (38%), Positives = 259/468 (55%), Gaps = 19/468 (4%)
Query: 66 AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAAERSKGLRKWY 124
+ +EV P G V+ V K + D + AF A LT ERS L +
Sbjct: 13 VSRDRVIEVRYPYNGTVVGTVP----KASVDDVRRAFAIAAAYRPTLTRYERSAILDRAA 68
Query: 125 DLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP---- 180
LL A KEE+ LITLE G K+++ EV A + F A EA R G+I L
Sbjct: 69 ALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGK 128
Query: 181 DRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239
R++F ++P+ GV AITP+N P+ + K+ PA+A +VVKPSE TPL+AL A++
Sbjct: 129 ARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADI 188
Query: 240 ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299
+AG+PP ++ VV G+ +I D L+T+P V +TFTG A+GK + A A ++ LE
Sbjct: 189 LYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG--YRRQVLE 246
Query: 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
LGGN P IV +DADL+ A + A+ ++NSGQ C R+LVQE + ++F + + +
Sbjct: 247 LGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRA 306
Query: 360 LKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 419
+ GD V G +I++AA E V +A+++GA++LLG R Y PTVL
Sbjct: 307 WRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG---ALYAPTVLDR 363
Query: 420 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 479
V M + REE FGPV+P++ F ++AI ++N T GL++ + TN L R L+
Sbjct: 364 VDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQV 423
Query: 480 GLVGVNE--GLISTEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 524
G V V E G E+ PFGG+K SGLG +EG + M F +K L
Sbjct: 424 GTVNVWEVPGY-RLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 317 bits (816), Expect = e-103
Identities = 173/464 (37%), Positives = 257/464 (55%), Gaps = 18/464 (3%)
Query: 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
G+ G+W G + +PA GE IA V ++ + I +A +AF W + A +R
Sbjct: 1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKR 58
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKR-VYGE 173
+ +R+ D L KE LG+L++LE GK L E +GEV + I+ +A R +YG
Sbjct: 59 GEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLGEVQ---EMIDICDFAVGLSRQLYGL 115
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
IP+ P R+ P+GV G IT +NFP+A+ AL CG VV KPS TPLTA
Sbjct: 116 TIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTA 175
Query: 234 LAA----AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
+A A + + G+P + ++V G A D+G+AL+ P+V ++FTGSTAVG+++
Sbjct: 176 IAVTKIVARVLEKNGLPGAIASLVCGGA-DVGEALVKDPRVPLVSFTGSTAVGRQVGQAV 234
Query: 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
A + LELGGN IV +DADL++AV L A +GQ C R++V E IY++
Sbjct: 235 AARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEV 294
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
+ KA K +++GD +G + GPL KAA++ +E+A S+G VL GG+
Sbjct: 295 LERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPG 354
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
+ EPT++ S+ + +EE F P+ +L F T EEAI N+ GL++ IFT +L+
Sbjct: 355 NYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRN 413
Query: 470 --TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE-GS 509
W + + G+V VN G E+ FGG K++G GRE GS
Sbjct: 414 AFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGS 457
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 171/453 (37%), Positives = 245/453 (54%), Gaps = 5/453 (1%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NPATGE + + + E AI+ A F + T A+R++ DLL A +++
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVA 66
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD---RRLFVLKQPVG 192
L+TLE GK L A E AK +YAE A+ + + PA R +V QP+G
Sbjct: 67 ALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEALLADE-PADAAAVGASRAYVRYQPLG 125
Query: 193 VAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252
V A+ PWNFPL + R PAL G ++K + P TAL A+L +AG P G
Sbjct: 126 VVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQT 185
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
++ + + +A+L P+V T TGS G+ + A A +KK LELGG+ P IV A
Sbjct: 186 LLVGSGAV-EAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSA 244
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL+ A A+ A+ +N+GQ+C+ A R +V +Y+ FA+ F + L+VGD
Sbjct: 245 DLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDV 304
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 432
GPL + ++VE V+DAV+ GA +L GG+R FY PTV++++ +M + EEVF
Sbjct: 305 GPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVF 364
Query: 433 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
GPVA L +EAI +AN T GL + +T + R + LE G V +N +S
Sbjct: 365 GPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYP 424
Query: 493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
PFGGVK+SG GRE S +G+ EF IK V +G
Sbjct: 425 ELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457
|
Length = 457 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 314 bits (807), Expect = e-102
Identities = 182/479 (37%), Positives = 264/479 (55%), Gaps = 20/479 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAE 115
LI GK + G T NPAT EV+ + + AI++A AF+ WS+ TA
Sbjct: 4 LIDGKLVAGSAG-TFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDTAL- 61
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKP--------LKEAVGEVDYGAKFIEFYAEEA 167
R + LR+ D L AH EEL +L E G P L+ V ++ + A E Y
Sbjct: 62 RVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESY--AW 119
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
G P +P RR + ++ VGV GAITPWNFP + K+GPALA G TVV+KP+
Sbjct: 120 TTDLGVASPMGIPTRRT-LRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAP 178
Query: 228 FTPLTALAAAEL-ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
TP A EL A PPGVVN+V + +G L P+V ++FTGSTA G+ +M
Sbjct: 179 DTPWCAAVLGELIAEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM 238
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
A AA T+KKV LELGG + IV DDADL A + A ++GQ C R++V Y
Sbjct: 239 ADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARY 298
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-- 404
++ A + + ++K GD G V GP+I+ ++V+++++ AV++G + GG R
Sbjct: 299 DEAVAAAAATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPA 358
Query: 405 -HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 463
G F EPTV++ + + V+REE+FGPV ++ +++A+ +AND+ GL+ +F
Sbjct: 359 DRDRGF-FVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVF 417
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ +R V+ + G V VN G+ + APFGG KQSG+GRE G +E+LE K +
Sbjct: 418 GADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGFEEYLETKLI 476
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 2e-98
Identities = 159/463 (34%), Positives = 253/463 (54%), Gaps = 15/463 (3%)
Query: 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
++PATG+ + +V ++ +AI++A A W+K + AER K LR ++ ++EE+
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEF---YAEEAKRVYGEIIPATLPDRRLFVLKQP 190
++ + GK + +A GE+ + I + + E+A R + +R V +P
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP 120
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA---LAAAELALQA-GIP 246
+GV GAI WN+P + + AL G +VVK SE ++ L+ L A G
Sbjct: 121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHD 180
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 306
P +V +V P+ +AL + P + ITF GS VGKK+MA AA ++ V LELGG P
Sbjct: 181 PDLVQLVTC-LPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA 239
Query: 307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366
IV DDADL+ + + F++SGQ C+ RV+V E IY+K + + V+ L+ G
Sbjct: 240 IVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPL 299
Query: 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM----TFYEPTVLSNVKS 422
V G +I+ A +++E V DAV KGA++L GG+R+ ++ PT+L +V
Sbjct: 300 DGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTP 359
Query: 423 EMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLV 482
+M +++EEVFGPV ++ +EEA+ +AN T GL A +F +++R R++ LE G+V
Sbjct: 360 DMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMV 419
Query: 483 GVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
+N+ ++ V PFGGVK SG GR + G+ K V
Sbjct: 420 AINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVT 462
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = 1e-96
Identities = 171/480 (35%), Positives = 255/480 (53%), Gaps = 29/480 (6%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
IGG+W+ G+ + P TG+V V ++ + A+ +A A +W K + AER+
Sbjct: 5 IGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERAN 64
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKE--------AVGEVDYGAKFIEFYAEEAKRV 170
L K D + A+ E L T + GKP++E A+ Y A I A+E
Sbjct: 65 ILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIR--AQEGS-- 120
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
EI T+ + +P+GV G I PWNFPL M T K+ PALA G VV+KP+E TP
Sbjct: 121 ISEIDENTVA----YHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTP 176
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
+ L EL + +PPGVVNVV G + G L +S ++ K+ FTG T G+ +M A+
Sbjct: 177 ASILVLMEL-IGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235
Query: 291 GTVKKVSLELGGNAPCIVF------DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 344
+ V+LELGG +P I F DDA + A+ G + N G+ C C +R L+QE
Sbjct: 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQES 294
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
IY++F + + VK +K G+ + G + LEK+ ++++ +GA+VL GG R
Sbjct: 295 IYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGER 354
Query: 405 HSLGMT----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 460
+ LG +Y PT ++M + +EE+FGPV + FK EEEA+ +ANDT GL A
Sbjct: 355 NELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGA 413
Query: 461 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
++T + +R+ ++ G V N + A FGG KQSG+GRE K +D + + K
Sbjct: 414 GVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTK 473
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 292 bits (749), Expect = 8e-93
Identities = 142/455 (31%), Positives = 234/455 (51%), Gaps = 13/455 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGG+ I D + NPA EV+ VS + + A+ +A +AF +W K + +R
Sbjct: 40 IIGGERITTED--KIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDR 97
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L + ++ K E + E GKP EA + F+E+YA + ++
Sbjct: 98 ARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPV 157
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ P P+GV I+PWNFP A++ A+ G TV++KP+ TP+ A
Sbjct: 158 ESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKF 217
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---- 292
E+ +AG+P GVVN V G+ ++GD L+ P+ R ITFTGS VG ++ AA
Sbjct: 218 VEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQ 277
Query: 293 --VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
+K+V E+GG +V +DADL++A +A+ F SGQ C +R +V E +Y++
Sbjct: 278 IWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVL 337
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
+ + K L VG+ + GP+IN+A+ +K+ +++E +G +++LGG
Sbjct: 338 EKVVELTKELTVGNP-EDNAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGY 395
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
F +PT+ ++V + + +EE+FGPV + K + A+ +AN+T GL + +NN +
Sbjct: 396 FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHL 455
Query: 471 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSG 503
+ G + N G V PFGG SG
Sbjct: 456 EKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 289 bits (740), Expect = 3e-92
Identities = 162/448 (36%), Positives = 244/448 (54%), Gaps = 4/448 (0%)
Query: 76 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135
NPATGE ++ + G + ++A+ A F W + R++ LR L A EE+
Sbjct: 13 NPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMA 72
Query: 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAG 195
Q+IT E GKP+ +A EV A ++YAE + + P + +++ + +P+G
Sbjct: 73 QMITREMGKPINQARAEVAKSANLCDWYAEHGPAML-KAEPTLVENQQAVIEYRPLGTIL 131
Query: 196 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255
AI PWNFPL + R P L G ++K + A A++ AGIP GV +
Sbjct: 132 AIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWL-- 189
Query: 256 NAPDIG-DALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 314
NA + G ++ ++ +T TGS G + A A +KK LELGG+ P IV +DADL
Sbjct: 190 NADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADL 249
Query: 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374
+AV A+A +++N+GQ C A R +++EGI F + F A LK+GD E GP
Sbjct: 250 ELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGP 309
Query: 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 434
+ +++ VE +++GA++LLGG + + +Y PTVL+NV EM REE+FGP
Sbjct: 310 MARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGP 369
Query: 435 VAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA 494
VA + K E A+ +AND+ GL+A IFT + + +++ LE G V +N S
Sbjct: 370 VAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARV 429
Query: 495 PFGGVKQSGLGREGSKYGMDEFLEIKYV 522
FGGVK+SG GRE S +G+ EF I+ V
Sbjct: 430 AFGGVKKSGFGRELSHFGLHEFCNIQTV 457
|
Length = 462 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 2e-85
Identities = 162/453 (35%), Positives = 229/453 (50%), Gaps = 16/453 (3%)
Query: 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSWSKLTAAERSKGLRKWYDLLM 128
LEV NP + I V + A+ +A F N+W L A ER L + DL+
Sbjct: 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNW--LPAHERIAILERLADLME 58
Query: 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRL 184
+EL LI E GKPL +A EV +E A+E ++ G IP L R
Sbjct: 59 ERADELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIA 118
Query: 185 FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244
F ++P+GV AI+ +N PL +I +V PA+A GC V+VKP+ TPL+ LA +L +AG
Sbjct: 119 FTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAG 178
Query: 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG-AAGTVKKVSLELGGN 303
+P G V + + L+T P+V +F GS VG L + A GT + +LE GG
Sbjct: 179 LPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPGT--RCALEHGGA 235
Query: 304 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 363
AP IV ADL+ + + F ++GQ CV RV V I + FA + A + L VG
Sbjct: 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVG 295
Query: 364 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 423
D GPLI +++VE +V +AV+ GA++L GG+R L T Y PTVL + +
Sbjct: 296 DPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKR--LSDTTYAPTVLLDPPRD 353
Query: 424 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 483
VS +E+FGPV + + +EAI AN A +FT +L + L+ V
Sbjct: 354 AKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVM 413
Query: 484 VNE-GLISTEVAPFGGVKQSGLGREGSKYGMDE 515
VN+ + PF G +QSG G G Y M +
Sbjct: 414 VNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHD 446
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 271 bits (694), Expect = 4e-85
Identities = 147/433 (33%), Positives = 226/433 (52%), Gaps = 8/433 (1%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
IGGK+ + G + V NPAT EV V+ E A++SA + F +W + + A+R+
Sbjct: 4 WIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L ++ LL H++E+ +LIT E GK +A+G+V G + +E + GE
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-ALACGCTVVVKPSEFTPLTALAA 236
++ ++QP+GV ITP+NFP AMI + P A+ACG T V+KPSE P A+
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFP-AMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKL 182
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
AEL +AG P GV+NVV G+ + D LL P V+ ++F GST +G+ + + K+V
Sbjct: 183 AELFSEAGAPDGVLNVVHGDKEAV-DRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRV 241
Query: 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356
G +V DAD + A + + A + +GQ C+ A V G +++ +
Sbjct: 242 QALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCM-AISAAVLVGAADEWVPEIRER 300
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL----GMTFY 412
+ +++G G G GPLI A ++V + + ++GA+VLL GR + + +
Sbjct: 301 AEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWV 360
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
PT+L V M +EE+FGPV +L T EEAI + N + G IFT + R
Sbjct: 361 GPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARR 420
Query: 473 VSEALEYGLVGVN 485
+E G VGVN
Sbjct: 421 FQHEIEVGQVGVN 433
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 264 bits (676), Expect = 5e-83
Identities = 154/436 (35%), Positives = 223/436 (51%), Gaps = 28/436 (6%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A AF W+ L+ ER+ LR++ +LL A+KEEL +LI+ E GKPL EA E
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 153 VDYGAKFIEF----YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208
V A I+ Y E R P + R + +P GV P+NFP +
Sbjct: 61 VAAMAGKIDISIKAYHE---RTGERATP--MAQGRAVLRHRPHGVMAVFGPFNFPGHLPN 115
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
+ PAL G TVV KPSE TP A EL +AG+PPGV+N+V G + G+AL
Sbjct: 116 GHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQG-GRETGEALAAHE 174
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKV-SLELGGNAPCIVFDDADLNVAVNGALAAKFR 327
+ + FTGS A G L AG K+ +LE+GGN P +V+D AD++ A + + F
Sbjct: 175 GIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFL 234
Query: 328 NSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 386
+GQ C CA R++V +G + F + +A K L++G E GPLI AA +
Sbjct: 235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLL 294
Query: 387 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTE 444
+D ++ G + LL R G F P ++ ++ V EE+FGP+ + +
Sbjct: 295 AQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDAAD---VPDEEIFGPLLQVYRYDDF 351
Query: 445 EEAIHMANDTNAGLAAYIFTNN---LQRTWRVSEALEYGLVGVNE---GLISTEVAPFGG 498
+EAI +AN T GL+A + +++ +R A G+V N G ST APFGG
Sbjct: 352 DEAIALANATRFGLSAGLLSDDEALFERFLARIRA---GIVNWNRPTTGASST--APFGG 406
Query: 499 VKQSGLGREGSKYGMD 514
V SG R + Y D
Sbjct: 407 VGLSGNHRPSAYYAAD 422
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 258 bits (662), Expect = 6e-80
Identities = 152/459 (33%), Positives = 223/459 (48%), Gaps = 19/459 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+I G + G+ V +PA E I VS ++ A++ A AF WS ER
Sbjct: 36 IING--EETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEER 93
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
++ L K DLL A++ EL L E GK L +A EV F +YA +A+ ++ +
Sbjct: 94 AEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E TPL A A
Sbjct: 154 PGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARA 213
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTV 293
EL +AG+P V+ +V G+ +IG+AL+ P++ + FTGST K + +A G +
Sbjct: 214 VELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPI 273
Query: 294 KKVSLELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFAD 351
+ E GG NA IV A AV + + F ++GQ C A R+L +QE I E+F +
Sbjct: 274 LPLIAETGGKNA-MIVDSTALPEQAVKDVVQSAFGSAGQRC-SALRLLYLQEEIAERFIE 331
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
A+ +LKVGD + GPLI+K A + + E + A ++ F
Sbjct: 332 MLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE-LMRGEAWLIAPAPLDDGNGYF 390
Query: 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQR 469
P ++ V L EVFGP+ ++ FK E +EAI N T GL I + + +R
Sbjct: 391 VAPGIIEIVGIFDL--TTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRD-ER 447
Query: 470 TWR-VSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 505
E +E G + +N + PFGG SG G
Sbjct: 448 EIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 1e-78
Identities = 142/460 (30%), Positives = 225/460 (48%), Gaps = 17/460 (3%)
Query: 76 NPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134
NP EV+ VS + + A+ +A AF +W K ER+ L K ++ + E
Sbjct: 52 NPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAAILFKAAAIVRRRRHEF 111
Query: 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVA 194
L+ E GKP EA EV F+E+YA + + + + P GV
Sbjct: 112 SALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYVYTPTGVT 171
Query: 195 GAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254
I+PWNFP A++ + G VV+KP+E P+ A E+ +AG+P GVV V
Sbjct: 172 VVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQFVP 231
Query: 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT------VKKVSLELGGNAPCIV 308
G+ ++GD L+ P+ ITFTGS VG ++ AA +K+V E+GG IV
Sbjct: 232 GSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDTVIV 291
Query: 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368
+DAD+ +A A + F +GQ C +R +V E +Y++ + F + ++LKVG
Sbjct: 292 DEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGPPDSA 351
Query: 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 428
V GP+I++ + K+ ++E ++G +++ GG F PT+ ++V + +++
Sbjct: 352 DVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKARLAQ 410
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488
EE+FGPV + +EA+ +AN+T GL + +NN R E G + N +
Sbjct: 411 EEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNLYFNRNI 470
Query: 489 ISTEVA--PFGGVKQSGLGREGSKYG----MDEFLEIKYV 522
V PFGG K SG SK G + F++ K V
Sbjct: 471 TGAIVGYQPFGGFKMSGT---DSKAGGPDYLALFMQAKTV 507
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 250 bits (641), Expect = 7e-78
Identities = 141/415 (33%), Positives = 214/415 (51%), Gaps = 32/415 (7%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVDYGAKFIEFYAEEA 167
R L+ +L ++EE+ + + GKP EA +GE+D+ K ++ + +
Sbjct: 22 RKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKP- 80
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227
+RV +P L + +V+ +P+GV I PWN+PL + + A+A G TVV+KPSE
Sbjct: 81 RRVS---VPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSE 137
Query: 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287
P T+ A+L + P V VV G ++ ALL P I FTGS AVGK +M
Sbjct: 138 LAPATSALLAKL-IPKYFDPEAVAVVEG-GVEVATALLAEP-FDHIFFTGSPAVGKIVME 194
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AA + V+LELGG +PCIV DA+L VA KF N+GQTC+ + VLV E I +
Sbjct: 195 AAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKD 254
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGR 403
+ + KA+K +GE + G +IN+ +++ + ++D KV++GG+
Sbjct: 255 ELIEELKKAIKEF-----YGEDPKESPDYGRIINERHFDRLASLLDD-----GKVVIGGQ 304
Query: 404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 463
PT+L +V + + +EE+FGP+ P+L + +EAI N LA Y+F
Sbjct: 305 VDKEERYI-APTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLF 363
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 516
+ + RV G V VN+ L+ + PFGGV SG+G K G D F
Sbjct: 364 SEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTF 418
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 7e-77
Identities = 150/497 (30%), Positives = 242/497 (48%), Gaps = 18/497 (3%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAIS 99
M+ R+++ +IGG+W+D + V A EV+ + E + A+
Sbjct: 4 MREALRRVKEEFGRAYPLVIGGEWVDTKERMV-SVSPFAPSEVVGTTAKADKAEAEAALE 62
Query: 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159
+A+ AF +W +R++ L K DLL + EL +T E GK EA+ +V F
Sbjct: 63 AAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDF 122
Query: 160 IEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216
I +YA A R+ E++P D F +G I+PWNFP+A+ T + +A
Sbjct: 123 IRYYARAALRLRYPAVEVVPYPGEDNESFY--VGLGAGVVISPWNFPVAIFTGMIVAPVA 180
Query: 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276
G TV+ KP+E + E+ +AG PPGVV + G ++G L ++R I FT
Sbjct: 181 VGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFT 240
Query: 277 GSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
GS GKK+ AA K++ +E GG IV + AD + V G + + F G
Sbjct: 241 GSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQG 300
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
Q C A+R+++ +G YE + K + L VG G GP+I+ KV +++E
Sbjct: 301 QKCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEH 360
Query: 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAI 448
++G +++LGG+R F PTV+ V + +++EE+FGPV ++ +K ++ EA+
Sbjct: 361 GKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEAL 419
Query: 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG- 505
+AN T GL +++ + G + +N + V PFGG K SG
Sbjct: 420 EVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA 479
Query: 506 REGSKYGMDEFLEIKYV 522
+ G + + FLE+K V
Sbjct: 480 KTGGPHYLRRFLEMKAV 496
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 240 bits (616), Expect = 4e-74
Identities = 137/435 (31%), Positives = 203/435 (46%), Gaps = 49/435 (11%)
Query: 108 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167
TAAER L++ ++A +EE+ + + KP EVD E
Sbjct: 14 LRASTAAERIAKLKRLKKAILARREEIIAALAADFRKP----AAEVD---------LTEI 60
Query: 168 KRVYGEI-----------------IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
V EI P L + + +P GV I+PWN+P +
Sbjct: 61 LPVLSEINHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGP 120
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+ A+A G T ++KPSE TP T+ A++ +A V V G+A ++ ALL P
Sbjct: 121 LVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDA-EVAQALLELP-F 177
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
I FTGS AVGK +MA AA + V+LELGG +P IV + ADL A KF N+G
Sbjct: 178 DHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAG 237
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGP----LINKAALEKVE 385
QTC+ + V V E + + F + + K G P ++N ++++
Sbjct: 238 QTCIAPDYVFVHESVKDAFVEHLKAEIEKFY----GKDAARKASPDLARIVNDRHFDRLK 293
Query: 386 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445
++DAV+KGAKV GG + + PTVL+NV +M + +EE+FGPV P++ ++ +
Sbjct: 294 GLLDDAVAKGAKVEFGG-QFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLD 352
Query: 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA----PFGGVKQ 501
E I N LA Y+F+ + +V G V VN+ ++ PFGGV
Sbjct: 353 EVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVL--HFLNPNLPFGGVNN 410
Query: 502 SGLGREGSKYGMDEF 516
SG+G YG F
Sbjct: 411 SGIGSYHGVYGFKAF 425
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 242 bits (620), Expect = 5e-74
Identities = 149/462 (32%), Positives = 227/462 (49%), Gaps = 21/462 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
G+W + GK++ + NP+T + V +E A+ SA A +W+K +R+
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE---- 173
+ L K +L HK + + + E KP K+AV EV I + AEE R+ GE
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 174 ---IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
P ++ K P+GV AI P+N+P+ + K+ PAL G VV+KP
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTG---STAVGKKLMA 287
+ AL AG P G+++ V G +IGD L P V I+FTG A+ KK
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKK--- 255
Query: 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYE 347
AG V + +ELGG CIV +DADL++A + F SGQ C VLV E + +
Sbjct: 256 --AGMV-PLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVAD 312
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL 407
+ + V L VG + + P++++++ +E V DA KGA +R
Sbjct: 313 ALVEKVNAKVAKLTVGPPEDDCDIT-PVVSESSANFIEGLVMDAKEKGATFCQEWKREG- 370
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
P +L NV+ +M ++ EE FGPV P++ + EE IH N +N GL +FT ++
Sbjct: 371 --NLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDI 428
Query: 468 QRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREG 508
+ +S+A+E G V +N + PF G+K SG+G +G
Sbjct: 429 NKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQG 470
|
Length = 496 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 3e-72
Identities = 148/456 (32%), Positives = 233/456 (51%), Gaps = 11/456 (2%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
+GG+W +G + NPA + IA V ++ ++ + + +A W ++ A +R +
Sbjct: 25 VGGEW--RANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGE 82
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT 178
+R+ D L A + LG+L++LE GK L E +GEV +F ++++ G IIP+
Sbjct: 83 IVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSE 142
Query: 179 LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALA--- 235
P+ + + P+G+ G IT +NFP A++ AL CG VV K + TPL +A
Sbjct: 143 RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTK 202
Query: 236 -AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
AE+ + +P + G A +IG+A+ ++ ++FTGS+ VG +
Sbjct: 203 LVAEVLEKNNLPGAIFTSFCGGA-EIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFG 261
Query: 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354
K LEL GN IV DDAD+ +AV L A +GQ C R+L+ E IY+ +
Sbjct: 262 KCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLL 321
Query: 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEP 414
K +K+GD +G + GPL + + E +E S+G K+L GG F +P
Sbjct: 322 TVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQP 381
Query: 415 TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR--TWR 472
T++ + + V +EE+FGPV ++ FKT EEAI + N GL++ IFT N + W
Sbjct: 382 TIVE-ISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWI 440
Query: 473 VSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGRE 507
+ G+V VN E+ FGG K +G GRE
Sbjct: 441 GPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 236 bits (605), Expect = 6e-72
Identities = 151/464 (32%), Positives = 235/464 (50%), Gaps = 16/464 (3%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I GKW G++ NPAT EV+ + + + A+++A AF +W++L+ ER
Sbjct: 3 IDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIA 61
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKF---IEFYAEEAKRVYGEI 174
++++ LL KE L ++I E GKPL E EV K I+ Y E
Sbjct: 62 VVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP- 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+PD R + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 121 ----MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
+L +AG+P GV+N+V G A + G AL P + + FTGS+ G L AG +
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235
Query: 295 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADA 352
K+ +LE+GGN P IV + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLAR 295
Query: 353 FSKAVKNLKVGDGFGEGV-VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411
+ + L VG E G +I+ A +++ ++ G K LL R+ G
Sbjct: 296 LVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAAL 355
Query: 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471
P ++ +V + EE FGP+ ++ + +EAI +AN+T GL+A + +++ +
Sbjct: 356 LTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414
Query: 472 RVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMD 514
R + G+V N+ L ++ APFGG+ SG R + Y D
Sbjct: 415 RFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD 458
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 232 bits (595), Expect = 2e-70
Identities = 154/472 (32%), Positives = 226/472 (47%), Gaps = 32/472 (6%)
Query: 59 IGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSK 118
I G WI A G+ E NP +GEV+ + + A+ +A AF +W++L+ ER
Sbjct: 5 INGDWI-AGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 119 GLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEF----YAEEAKRVYGEI 174
+ ++ LL +KEEL ++I E GKPL EA EV I Y E E
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE- 122
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+ D + +P GV P+NFP + + PAL G TVV KPSE TP A
Sbjct: 123 ----MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 178
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
+L QAG+P GV+N+V G + G AL P + + FTGS G L AG +
Sbjct: 179 LTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPE 237
Query: 295 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADA 352
K+ +LE+GGN P ++ + AD++ AV+ + + F ++GQ C CA R+LV +G + F
Sbjct: 238 KILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLAR 297
Query: 353 FSKAVKNLKVGDGFGEGV-VQGPLI-NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
K L VG E G +I +AA V ++ G K LL + G
Sbjct: 298 LVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQ-AQLLALGGKSLLEMTQLQAGTG 356
Query: 411 FYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN-- 466
P ++ + V + EE FGP+ ++ + +EAI +AN+T GL+A + +++
Sbjct: 357 LLTPGIIDVTGVAE---LPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRE 413
Query: 467 -LQRTWRVSEALEYGLVGVNE---GLISTEVAPFGGVKQSGLGREGSKYGMD 514
+ A G+V N+ G S APFGGV SG R + Y D
Sbjct: 414 DYDQFLLEIRA---GIVNWNKPLTGASSA--APFGGVGASGNHRPSAYYAAD 460
|
Length = 487 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 229 bits (587), Expect = 8e-70
Identities = 136/440 (30%), Positives = 212/440 (48%), Gaps = 41/440 (9%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV------ 150
S F S R L++ Y + ++E + + + + G+P E +
Sbjct: 10 IHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSG 69
Query: 151 --GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLA 205
++ + K ++ +A++ K + + K+P+GV I PWN+P+
Sbjct: 70 VKNDILHMLKNLKKWAKDEK------VKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPV- 122
Query: 206 MITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGD 262
++ + P A+A GCTVV+KPSE TP TA AEL + + P VV G P+
Sbjct: 123 LLA--LSPLVGAIAAGCTVVLKPSELTPHTAALLAEL-VPKYLDPDAFQVVQGGVPETT- 178
Query: 263 ALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 322
ALL KI +TGS VG+ + AA + V+LELGG +P IV +ADL +A L
Sbjct: 179 ALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRIL 237
Query: 323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINK 378
KF N+GQ CV + VLV +Y++F + K + + G P ++N
Sbjct: 238 WGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEF-----YPGGANASPDYTRIVNP 292
Query: 379 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438
++++ ++ +KG KV++GG F PT++S+V + + EE+FGPV P+
Sbjct: 293 RHFNRLKSLLDT--TKG-KVVIGGEM-DEATRFIPPTIVSDVSWDDSLMSEELFGPVLPI 348
Query: 439 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APF 496
+ +EAI + N + LA YIFT++ + G V +N+ LI V APF
Sbjct: 349 IKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPF 408
Query: 497 GGVKQSGLGREGSKYGMDEF 516
GGV SG G KYG D F
Sbjct: 409 GGVGDSGYGAYHGKYGFDTF 428
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 6e-69
Identities = 133/420 (31%), Positives = 213/420 (50%), Gaps = 42/420 (10%)
Query: 116 RSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV--------GEVDYGAKFIEFYAEEA 167
R + L+K + ++ E+ + + + GK EA E++Y K ++ + +
Sbjct: 22 RIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKP- 80
Query: 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVK 224
KRV + P + ++ +P GV I PWN+P + + P A+A G T V+K
Sbjct: 81 KRVKTPL--LNFPSKS-YIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLK 134
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
PSE TP T+ A++ ++ V VV G + LL I FTGS VGK
Sbjct: 135 PSELTPNTSKVIAKI-IEETFDEEYVAVVEGGV-EENQELLDQK-FDYIFFTGSVRVGKI 191
Query: 285 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 344
+M AA + V+LELGG +PCIV +DA+L +A + KF N+GQTCV + VLV E
Sbjct: 192 VMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHES 251
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLL 400
+ EKF + +K +GE ++ P +IN+ +++ +++ K++
Sbjct: 252 VKEKFIKELKEEIKKF-----YGEDPLESPDYGRIINEKHFDRLAGLLDN-----GKIVF 301
Query: 401 GGR--RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 458
GG R +L + EPT+L NV + V +EE+FGP+ P+L + T +EAI + L
Sbjct: 302 GGNTDRETL---YIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPL 358
Query: 459 AAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEF 516
A Y+F+ + + +V E L +G +N+ ++ + PFGGV SG+G KY D F
Sbjct: 359 ALYLFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTF 418
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 225 bits (577), Expect = 3e-68
Identities = 130/364 (35%), Positives = 176/364 (48%), Gaps = 67/364 (18%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQ 242
V QP+GV G I PWN+PL + +GP ALA G V++KPSEFTP T+ AEL L
Sbjct: 97 VEYQPLGVVGIIVPWNYPL-YLA--LGPLIAALAAGNRVMIKPSEFTPRTSALLAEL-LA 152
Query: 243 AGIPPGVVNVVMGNAPDIGDA--------LLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294
V VV G D+ A LL FTGSTAVG+ +M AA +
Sbjct: 153 EYFDEDEVAVVTG-GADVAAAFSSLPFDHLL---------FTGSTAVGRHVMRAAAENLT 202
Query: 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354
V+LELGG +P I+ DADL A K N+GQTCV + VLV E E+F A
Sbjct: 203 PVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAK 262
Query: 355 KAVKNLKVGDGFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKV---------LLG 401
AV + + P +IN+ +++ +EDA +KGA+V
Sbjct: 263 AAVAKM-----YPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAA 316
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
R+ PT++ NV +M V +EE+FGP+ P+L + + +EAI N LA Y
Sbjct: 317 TRK-------LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALY 369
Query: 462 IFTNN-------LQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYG 512
F + L+RT S G V +N+ L ++ + PFGGV SG+G K G
Sbjct: 370 YFGEDKAEQDRVLRRT--HS-----GGVTINDTLLHVAQDDLPFGGVGASGMGAYHGKEG 422
Query: 513 MDEF 516
F
Sbjct: 423 FLTF 426
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 224 bits (574), Expect = 2e-67
Identities = 129/431 (29%), Positives = 205/431 (47%), Gaps = 22/431 (5%)
Query: 103 DAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA--------VGEVD 154
++F + R + LR +L +K+E + + + G+ E V E++
Sbjct: 18 ESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIE 77
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
+ K ++ Y + K V P + +++ +P+GV I WN+PL + + A
Sbjct: 78 HLLKHLDEYLKPEK-VDTVG--VFGPGKS-YIIPEPLGVVLVIGAWNYPLNLTLIPLAGA 133
Query: 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 274
+A G TVV+KPSE +P T+ A+L L + P V V+ G LL P I
Sbjct: 134 IAAGNTVVLKPSELSPHTSKLMAKL-LTKYLDPSYVRVIEGGVEVT-TELLKEP-FDHIF 190
Query: 275 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334
FTGS VGK +M AA + +LELGG +P IV +L VA KF N+GQTCV
Sbjct: 191 FTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCV 250
Query: 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394
+ VLV I +KF +A +A+K G+ + ++N+ +++ ++D
Sbjct: 251 APDYVLVHRSIKDKFIEALKEAIKEF-FGEDPKKSEDYSRIVNEFHTKRLAELIKD---H 306
Query: 395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 454
G KV+ GG + + PT++ N + + +EE+FGP+ P+L ++ +E + N
Sbjct: 307 GGKVVYGG-EVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSR 365
Query: 455 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGGVKQSGLGREGSKYG 512
LA Y F + + V E G V +N+ + + PFGGV SG+G KYG
Sbjct: 366 PKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYG 425
Query: 513 MDEFLEIKYVC 523
D F K V
Sbjct: 426 FDTFSHPKPVL 436
|
Length = 493 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 9e-67
Identities = 158/478 (33%), Positives = 247/478 (51%), Gaps = 13/478 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
R LIGG ++++ ++V NPAT EV++ V +E K A+S+A AF W
Sbjct: 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPI 172
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R + + K+ +L+ + ++L IT EQGK LK++ G++ G + +E A GE
Sbjct: 173 TTRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGE 232
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP-ALACGCTVVVKPSEFTPLT 232
+P + +++P+GV I P+NFP AMI + P A+ CG T ++KPSE P
Sbjct: 233 YLPNVSNGVDTYSIREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFILKPSEKDPGA 291
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
++ AELA++AG+P GV+N+V G D +A+ +R ++F GS G + A AA
Sbjct: 292 SVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAK 350
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
K++ +G +V DA+++ +N LAA F +GQ C+ + V V G + + D
Sbjct: 351 GKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTV-VFVGDAKSWEDK 409
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR-----HSL 407
+ K LKV G GP+I+K A E++ ++ V GAK+LL GR +
Sbjct: 410 LVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEK 469
Query: 408 GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
G F PT+LS V +M +EE+FGPV + + +EAI + N G A IFT++
Sbjct: 470 G-NFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSG 528
Query: 468 QRTWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREG--SKYGMDEFLEIKYV 522
+ +E G +G+N + + F G K S G K G+D F +IK V
Sbjct: 529 AAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLV 586
|
Length = 604 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 211 bits (540), Expect = 7e-63
Identities = 141/438 (32%), Positives = 215/438 (49%), Gaps = 36/438 (8%)
Query: 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 153
+A+ A +AF+S R + L +L +++E+ + + + KP EAV E+
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 154 DYGAKFIEFYA-----EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208
I+ YA E K + ATL D +++ K+P+GV I WN+PL +
Sbjct: 61 LLVKNEIK-YAISNLPEWMKPEPVKKNLATLLDD-VYIYKEPLGVVLIIGAWNYPLQLTL 118
Query: 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP----PGVVNVVMGNAPDIGDAL 264
+ A+A G VV+KPSE +P TA AEL IP VV+G +
Sbjct: 119 VPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGGVEET--TE 171
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324
L + I +TGST+VGK +M AA + V+LELGG +PC V D++VA
Sbjct: 172 LLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWG 231
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ----GPLINKAA 380
KF N+GQTC+ + VL + EKF +A K +K + +GE + G +IN
Sbjct: 232 KFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLK-----EFYGEDPKESPDYGRIINDRH 286
Query: 381 LEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 440
++++ + G KV +GG + + PTVL++VK V +EE+FGP+ P++
Sbjct: 287 FQRLKKLLS-----GGKVAIGG-QTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVT 340
Query: 441 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAPFGG 498
+EAI N LA Y+F+NN + ++ G V VN+ + + + PFGG
Sbjct: 341 VNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTLDSLPFGG 400
Query: 499 VKQSGLGREGSKYGMDEF 516
V SG+G KY D F
Sbjct: 401 VGNSGMGAYHGKYSFDTF 418
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 199 bits (507), Expect = 1e-57
Identities = 145/478 (30%), Positives = 217/478 (45%), Gaps = 32/478 (6%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IG + DG+ V NPA +++ V + AI SA AF +W+ A ER
Sbjct: 41 IIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKER 98
Query: 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP 176
+ L + DLL H EL L E GK + A+ EV F +YA++ + V GE
Sbjct: 99 AAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGEFS- 157
Query: 177 ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236
+ GV I+PWNFPLA+ T ++ ALA G TV+ KP+E T L A A
Sbjct: 158 -----------VESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRA 206
Query: 237 AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAGAAGTV 293
EL +AG P G + ++ G D+G AL + P++ + FTGST V + + +A
Sbjct: 207 VELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADA 352
+ E GG IV A V L + F ++GQ C A RVL VQE + ++
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRC-SALRVLCVQEDVADRVLTM 325
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG---AKVLLGGRRHSLGM 409
A++ LKVG GP+I+ A + + +E A++ L R
Sbjct: 326 IQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHG 385
Query: 410 TFYEPTVLS-NVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNN 466
TF PT+ + +E+ EEVFGPV ++ +K E + + N T GL + +
Sbjct: 386 TFVAPTLFELDDIAEL---SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGSKYGMDEFLEIKY 521
+ + G VN + V PFGG SG G + G + + +++Y
Sbjct: 443 ETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 199 bits (509), Expect = 5e-55
Identities = 149/465 (32%), Positives = 224/465 (48%), Gaps = 53/465 (11%)
Query: 65 DAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKW 123
DG T V NPA +V+ V+ ++ + A+++A AF WS AAER+ L +
Sbjct: 562 GDVDGGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERA 621
Query: 124 YDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRR 183
DL+ AH EL L E GK L A+ EV F+ +YA +A+R L
Sbjct: 622 ADLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARR--------LLNGPG 673
Query: 184 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243
+P+G I+PWNFPLA+ T ++ AL G TV+ KP+E TPL A A L +A
Sbjct: 674 H----KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEA 729
Query: 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVKKVSL-- 298
G+P + ++ G+ +G AL+ P++ + FTGST V + + +A +G V L
Sbjct: 730 GVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG--PPVPLIA 787
Query: 299 ELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKA 356
E GG NA IV A V +A+ F ++GQ C A RVL +QE + ++ A
Sbjct: 788 ETGGQNA-MIVDSSALPEQVVADVIASAFDSAGQRC-SALRVLCLQEDVADRVLTMLKGA 845
Query: 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------- 409
+ L++GD + GP+I+ A +E +E + G V H L +
Sbjct: 846 MDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLV------HQLPLPAETEKG 899
Query: 410 TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMANDTNAGLAAYI 462
TF PT+ + ++ S++ EVFGPV ++ FK +E + I N T GL +
Sbjct: 900 TFVAPTLIEIDSI-SDL---EREVFGPVLHVVRFKADELDRVIDDI---NATGYGLTFGL 952
Query: 463 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 505
+ + V+ + G + VN +I V PFGG SG G
Sbjct: 953 HSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 8e-54
Identities = 113/344 (32%), Positives = 170/344 (49%), Gaps = 17/344 (4%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
++ +P+GV I+ WNFP + V A+A G VV+KPSE P T+ A+L + +
Sbjct: 97 IVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKL-IPEYL 155
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 305
+ V+ G ALL + KI FTGS VG+ +MA AA + V+LELGG P
Sbjct: 156 DTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCP 213
Query: 306 CIVFDDADLNVAVNGALAAKF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 364
IV DL VAV K+ N+GQ C+ + VLV+E DA ++
Sbjct: 214 VIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKF---- 269
Query: 365 GFGEGVVQGP----LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNV 420
FGE + ++N +++ ++D S K++ GG R + + EPT+L +
Sbjct: 270 -FGENPKESKDLSRIVNSHHFQRLSRLLDDP-SVADKIVHGGERDEKNL-YIEPTILLDP 326
Query: 421 KSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480
+ + EE+FGP+ P++ K EE+I + N LAAY+FT N + R+ G
Sbjct: 327 PLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSG 386
Query: 481 LVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMDEFLEIKYV 522
V N+ ++ + PFGGV +SG G K+ D F K V
Sbjct: 387 GVTFNDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAV 430
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 1e-53
Identities = 150/466 (32%), Positives = 229/466 (49%), Gaps = 40/466 (8%)
Query: 64 IDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
I +G+ V +PA V+ V+ ++ + A+++A AF +WS+ ER+ L +
Sbjct: 556 IINGEGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILER 615
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLP-- 180
DLL A++ EL L E GK L++A+ EV F +YA +A+R++G P LP
Sbjct: 616 AADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGA--PEKLPGP 673
Query: 181 ---DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
L + GV I+PWNFPLA+ +V ALA G TV+ KP+E TPL A A
Sbjct: 674 TGESNELRL--HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAV 731
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK---KLMAGAAGTVK 294
+L +AGIP V+ ++ G+ +G AL P++ + FTGST + + +A G +
Sbjct: 732 KLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPI- 790
Query: 295 KVSL--ELGG-NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFA 350
V L E GG NA IV A V+ + + FR++GQ C A RVL VQE I ++
Sbjct: 791 -VPLIAETGGQNA-MIVDSTALPEQVVDDVVTSAFRSAGQRC-SALRVLFVQEDIADRVI 847
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM- 409
+ A+ LKVGD GP+I+ A ++ +E + + A++L +
Sbjct: 848 EMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIE-RMKREARLLAQLPLPAGTEN 906
Query: 410 -TFYEPTV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE-----EAIHMANDTNAGLAAY 461
F PT + ++ EVFGP+ ++ +K + +AI N T GL
Sbjct: 907 GHFVAPTAFEIDSIS----QLEREVFGPILHVIRYKASDLDKVIDAI---NATGYGLTLG 959
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG 505
I + + R+++ + G V VN I V PFGG SG G
Sbjct: 960 IHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTG 1005
|
Length = 1038 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 1e-53
Identities = 144/450 (32%), Positives = 217/450 (48%), Gaps = 29/450 (6%)
Query: 68 DGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 126
G+ V NPA +++ V+ + + A+ +A A WS AER+ L + DL
Sbjct: 125 GGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADL 184
Query: 127 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 186
+ A +L L+ E GK L A+ EV F+ +YA +A+ +G +
Sbjct: 185 MEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------L 232
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
+P+G I+PWNFPLA+ T ++ ALA G +V+ KP+E TPL A A L +AG+P
Sbjct: 233 THRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVP 292
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAGAAGTVKKVSLELGGN 303
PGV+ ++ G +G AL +V + FTGST V + + +A G + E GG
Sbjct: 293 PGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQ 352
Query: 304 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKNLKV 362
IV A V LA+ F ++GQ C A RVL +QE + ++ A+ L+V
Sbjct: 353 NAMIVDSSALAEQVVADVLASAFDSAGQRC-SALRVLCLQEDVADRILTMLKGAMAELRV 411
Query: 363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTV--LSN 419
G+ GP+I+ A +E ++ SKG V +SL TF PT+ L N
Sbjct: 412 GNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELEN 471
Query: 420 VKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL 477
+ E+ + EVFGPV ++ +K + +E I N T GL + T + V+E
Sbjct: 472 L-DEL---QREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERA 527
Query: 478 EYGLVGVNEGLISTEVA--PFGGVKQSGLG 505
G + VN ++ V PFGG SG G
Sbjct: 528 HAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 166 bits (422), Expect = 1e-45
Identities = 119/351 (33%), Positives = 173/351 (49%), Gaps = 28/351 (7%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
V+ +P+GV + WNFP+ + + A+A G VV+KPSE P T +A LA A I
Sbjct: 104 VVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT---SAFLA--ANI 158
Query: 246 P----PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 301
P V V+ G P +G+ LL KI FTGS VG+ +M AA + V+LELG
Sbjct: 159 PKYLDSKAVKVIEG-GPAVGEQLLQHKW-DKIFFTGSPRVGRIIMTAAAKHLTPVALELG 216
Query: 302 GNAPCIV--FDDA-DLNVAVNGALAAKFRN-SGQTCVCANRVLVQEGIYEKFADAFSKAV 357
G PCIV + D VAVN + K+ + +GQ C+ + VLV+E + +
Sbjct: 217 GKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTI 276
Query: 358 KNLKVGDGFGEGVVQ----GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 413
K FGE + ++NK +++ ++D A ++ GG + F E
Sbjct: 277 KKF-----FGENPRESKSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSIDEKKL-FIE 329
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PT+L N + + EE+FGP+ P++ K E++I N LA Y FTNN + R+
Sbjct: 330 PTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389
Query: 474 SEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
G V N+ +I + + PFGGV +SG GR KY D F K V
Sbjct: 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAV 440
|
Length = 484 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 2e-42
Identities = 130/480 (27%), Positives = 223/480 (46%), Gaps = 53/480 (11%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGGK + G T + P V+A + AI +A +A W+++ +R
Sbjct: 36 VIGGKEV--RTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDR 93
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 172
+ K DLL ++ EL L QGK + +A E+D + F+ F + A+ +Y
Sbjct: 94 AAIFLKAADLLSGKYRYELNAATMLGQGKNVWQA--EIDAACELIDFLRFNVKYAEELYA 151
Query: 173 EIIPATLPDRRLFVLKQPV-GVAGAITPWNF-------PLAMITRKVGPALACGCTVVVK 224
+ ++ + +P+ G A++P+NF A PAL G V+ K
Sbjct: 152 QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGA-------PALM-GNVVLWK 203
Query: 225 PSEFTPLTALAAAELALQ----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTA 280
PS+ TA+ + L + AG+PPGV+N V G+ P +GD +L SP + + FTGST
Sbjct: 204 PSD----TAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTP 259
Query: 281 VGKKLMAGAAG------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334
K L T ++ E GG +V AD++ V + F GQ C
Sbjct: 260 TFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCS 319
Query: 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA-VS 393
A+R V E ++ + + + +K +K+GD G +I++ A ++++ +++ A
Sbjct: 320 AASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSD 379
Query: 394 KGAKVLLGGR-RHSLGMTFYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKTE--EEAI 448
A+++ GG+ S+G F EPTV+ ++ K +++ EE+FGPV + + EE +
Sbjct: 380 PEAEIIAGGKCDDSVGY-FVEPTVIETTDPKHKLMT--EEIFGPVLTVYVYPDSDFEETL 436
Query: 449 HMANDTNA-GLAAYIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 503
+ + T+ L IF + + ++AL G +N+ V PFGG + SG
Sbjct: 437 ELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 162 bits (411), Expect = 3e-42
Identities = 140/457 (30%), Positives = 214/457 (46%), Gaps = 38/457 (8%)
Query: 68 DGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDL 126
G+ V NPA +++ V E + A+ SA +A W AER+ L + DL
Sbjct: 657 AGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADL 716
Query: 127 LMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFV 186
+ A + L L+ E GK A+ EV F+ +YA + + + T
Sbjct: 717 MEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFDN---DT-------- 765
Query: 187 LKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIP 246
+P+G I+PWNFPLA+ T +V ALA G +V+ KP+E TPL A A + L+AG+P
Sbjct: 766 -HRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVP 824
Query: 247 PGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL---MAG---AAGTVKKVSLEL 300
GVV ++ G +G AL+ +VR + FTGST V + L +AG G + E
Sbjct: 825 AGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAET 884
Query: 301 GGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL-VQEGIYEKFADAFSKAVKN 359
GG IV A V LA+ F ++GQ C A RVL +Q+ + ++ A+
Sbjct: 885 GGQNAMIVDSSALTEQVVADVLASAFDSAGQRC-SALRVLCLQDDVADRTLKMLRGAMAE 943
Query: 360 LKVG--DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM---TFYEP 414
++G D + GP+I+ A +E ++ +KG V R +S TF P
Sbjct: 944 CRMGNPDRLSTDI--GPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPP 1001
Query: 415 TV--LSNVKSEMLVSREEVFGPVAPLLCFKTEE--EAIHMANDTNAGLAAYIFTNNLQRT 470
T+ L + E+ + EVFGPV ++ + + E I N + GL + T +
Sbjct: 1002 TLIELDSF-DEL---KREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETI 1057
Query: 471 WRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG 505
+V+ + G + VN ++ V PFGG SG G
Sbjct: 1058 AQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTG 1094
|
Length = 1318 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 6e-42
Identities = 129/467 (27%), Positives = 212/467 (45%), Gaps = 26/467 (5%)
Query: 58 LIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
+IGG+ + G+ + +P V+A + + A+ +A DA WS L +R
Sbjct: 35 VIGGEEVWT-SGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDR 93
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEAVGEVDYGAK---FIEFYAEEAKRVYG 172
+ K DLL ++ E+ L Q K + +A E+D A+ F F A+ A+ +Y
Sbjct: 94 AAIFLKAADLLSGPYRAEILAATMLGQSKTVYQA--EIDAVAELIDFFRFNAKYARELYE 151
Query: 173 EIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
+ P + P +P+ G AI+P+NF PAL G TV+ KPS+ L
Sbjct: 152 QQ-PISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAML 209
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+ + +AG+PPGV+N V G+ P + D +L P + I FTGST K L A
Sbjct: 210 SNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQ 269
Query: 292 TVKK------VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ + + E GG +V AD+ V+G + F GQ C +R+ V +
Sbjct: 270 NLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA--KVLLGGR 403
+ +F + +KVGD G G +I++ + K+ ++E A S + +L GG+
Sbjct: 330 WPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGK 389
Query: 404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF---KTEEEAIHMANDTNAGLAA 460
F EPTV+ + + + +EE+FGPV + + K +E + + T+ GL
Sbjct: 390 YDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLTG 449
Query: 461 YIFTNNLQRTWRVSEALEY--GLVGVNEGLISTEVA--PFGGVKQSG 503
+F + + L + G +N+ V PFGG + SG
Sbjct: 450 AVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVGQQPFGGARASG 496
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 3e-40
Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 15/343 (4%)
Query: 186 VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI 245
++ +P+GV I+ WN+P + V A++ G VV+KPSE P ++ A+L L+ +
Sbjct: 108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL-LEQYL 166
Query: 246 PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP 305
V VV G + L + KI +TGS+ +G+ +MA AA + V LELGG +P
Sbjct: 167 DSSAVRVVEGAVTET--TALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSP 224
Query: 306 CIVFDDADLNVAVNGALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 364
+V D DL V V +A K+ N+GQ C+ + +L + K DA K ++ G
Sbjct: 225 VVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETF-YGK 283
Query: 365 GFGEGVVQGPLINKAALEKVETFV-EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE 423
E ++N +++ + E VS K++ GG + + PT+L +V +
Sbjct: 284 NPMESKDMSRIVNSTHFDRLSKLLDEKEVSD--KIVYGGEKDRENLKI-APTILLDVPLD 340
Query: 424 MLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 483
L+ EE+FGP+ P+L EE+ + LAAY+FT+N + R + + G +
Sbjct: 341 SLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400
Query: 484 VNEGLISTEVA----PFGGVKQSGLGREGSKYGMDEFLEIKYV 522
VN+ I+ +A PFGGV +SG+G K+ D F K V
Sbjct: 401 VND--IAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAV 441
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 9e-32
Identities = 123/451 (27%), Positives = 193/451 (42%), Gaps = 59/451 (13%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 114
Q + G+W A G +H+ TGEV+A VS G + A++ A + + LT
Sbjct: 2 QSYVAGQWH-AGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFH 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 169
ER+ L+ LM KE+L ++ G +++ ++D G + YA +R
Sbjct: 60 ERAAMLKALAKYLMERKEDLYA-LSAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNA 118
Query: 170 ---VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
V G++ P T + + ++ GVA I +NFP+ + K PAL G V+
Sbjct: 119 HFLVEGDVEPLSKDGTFVGQHILTPRR--GVAVHINAFNFPVWGMLEKFAPALLAGVPVI 176
Query: 223 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
VKP+ T A + +++G+ P G + ++ G+ D+ D L V + FTGS A
Sbjct: 177 VKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL-GEQDV--VAFTGSAAT 233
Query: 282 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD-LNVAVNGALAAK------------FRN 328
KL A + + NA +AD LN A+ G A R
Sbjct: 234 AAKLRAHPNIVARSIRF----NA------EADSLNAAILGPDATPGTPEFDLFVKEVARE 283
Query: 329 ----SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384
+GQ C R V E + +A + + VGD EGV GPL+++ E V
Sbjct: 284 MTVKAGQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDV 343
Query: 385 ETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVL--SNVKSEMLVSREEVFGPV 435
V + A+V+ GG + F+ PT+L + + V E FGPV
Sbjct: 344 RAAVA-TLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPV 402
Query: 436 APLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
A L+ + + EAI +A L A + TN+
Sbjct: 403 ATLMPYDSLAEAIELAARGRGSLVASVVTND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 121 bits (304), Expect = 6e-29
Identities = 113/431 (26%), Positives = 175/431 (40%), Gaps = 31/431 (7%)
Query: 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSKLTAA 114
Q + G+W G+ + V + +TGEV+A V+ G + A++ A + + LT
Sbjct: 2 QSYLSGEWRTG-QGEGVPVRDASTGEVLARVTS-EGLDVAAAVAWAREVGGPALRALTFH 59
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----- 169
ER++ L+ L KE L L G ++ ++D G + Y+ +R
Sbjct: 60 ERARMLKALAQYLSERKEALYAL-AATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDA 118
Query: 170 ---VYGEIIPATLPDRRLF----VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
E P L F +L GVA I +NFP+ + K PA G +
Sbjct: 119 NLIPEDEFEP--LSKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTL 176
Query: 223 VKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
KP+ T A A +++G+ P G + ++ G+A D+ D L V FTGS A
Sbjct: 177 AKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGDLLDHLDHRDVV---AFTGSAAT 233
Query: 282 GKKLMA-------GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334
+L A G + SL D+ + ++ + +GQ C
Sbjct: 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCT 293
Query: 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394
RV+V + + E A + + +GD EGV GPL++ VE V ++
Sbjct: 294 AIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAA 353
Query: 395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPVAPLLCFKTEEEAIHMAND 453
GA+V LGG G F+ PT+L V E FGPVA + EA +A
Sbjct: 354 GAEVRLGGPGRLDG-AFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAAR 412
Query: 454 TNAGLAAYIFT 464
L A + T
Sbjct: 413 GGGSLVATLAT 423
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 5e-27
Identities = 117/449 (26%), Positives = 186/449 (41%), Gaps = 62/449 (13%)
Query: 59 IGGKWID-AYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF------NSWSKL 111
+ G+W + G L +P TGE + VS G +++AF AF + L
Sbjct: 9 VAGRWQAGSGAGTPL--FDPVTGEELVRVSATGLD-----LAAAF-AFAREQGGAALRAL 60
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY 171
T A+R+ L +L A+++ + T G ++ ++D G + +YA+
Sbjct: 61 TYAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAK------ 114
Query: 172 GEIIPATLPDRRLFVLKQPV------------------GVAGAITPWNFPLAMITRKVGP 213
+ A L D RL + V GVA I +NFP + K P
Sbjct: 115 ---LGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWGLWEKAAP 171
Query: 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRK 272
AL G V+VKP+ T + + AGI P G ++VV G++ + D L V
Sbjct: 172 ALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHLQPFDVV-- 229
Query: 273 ITFTGSTAVGKKLMAGAAGTVKKV-------SLELGGNAPCIVFDDADLNVAVNGALAAK 325
+FTGS L + A + V SL P ++ V +
Sbjct: 230 -SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREM 288
Query: 326 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 385
SGQ C R+ V E +Y+ A+A + + VG+ +GV GPL+++A L V
Sbjct: 289 TVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVR 348
Query: 386 TFVEDAVSKGAKVLLGGRRHSL------GMTFYEPTVL--SNVKSEMLVSREEVFGPVAP 437
+ A+ A+VL G +L PT+L S+ + V EVFGPVA
Sbjct: 349 AGLA-ALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDVEVFGPVAT 407
Query: 438 LLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
LL ++ A+ +A L A +++++
Sbjct: 408 LLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 2e-26
Identities = 106/372 (28%), Positives = 147/372 (39%), Gaps = 51/372 (13%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A ++A AF S+ L+ A R+ L D + A +EL E G P GE+
Sbjct: 4 AAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRT 63
Query: 157 AKFIEFYAEEAKR--VYGEII--------PATLPD-RRLFVLKQPVGVAGAITPWNFPLA 205
+ +A+ + I P PD RR+ V PV V GA NFPLA
Sbjct: 64 TGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGAS---NFPLA 120
Query: 206 MITRKVG----PALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 257
G ALA GC VVVK P T+ A A G+P GV +++ G
Sbjct: 121 FSV--AGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGG 178
Query: 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDADLN 315
++G AL+ P ++ + FTGS G+ L AA ELG P + A
Sbjct: 179 REVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGA--- 235
Query: 316 VAVNG-ALAAKFRNS-----GQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGE 368
+A G A+A F S GQ C VLV G + F A ++A+
Sbjct: 236 LAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTP 295
Query: 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVS- 427
G+ + AL G +VL GG G PT+ V + ++
Sbjct: 296 GIAEAYRQGVEALAAA---------PGVRVLAGGAAAEGGNQ-AAPTLFK-VDAAAFLAD 344
Query: 428 ---REEVFGPVA 436
+EEVFGP +
Sbjct: 345 PALQEEVFGPAS 356
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-23
Identities = 92/418 (22%), Positives = 154/418 (36%), Gaps = 32/418 (7%)
Query: 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYG 156
A+ +A + + +L +R+ L + L A ++ L GK A +
Sbjct: 4 ALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFA-ENICGD 62
Query: 157 AKFIEFYAE--EAKRVYGEIIPATLPDRRLFVLKQ--PVGVAGAITPWNFPLAMITRKVG 212
+ A + R+ E + P G I +NFPL + ++
Sbjct: 63 QVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLA 122
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVR 271
ALA G V+VKP + L AG+ PP V ++ G+ ALL P +
Sbjct: 123 GALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDG-KTMQALLLHPNPK 181
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK-FRNSG 330
+ FTGS+ V +KL A ++ LEL G ++ DA V SG
Sbjct: 182 MVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSG 239
Query: 331 QTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389
Q C + + V E + + K+ D ++ GP+ L +
Sbjct: 240 QKCTAQSMLFVPENWSKTPLVEKLKALLARRKLED-----LLLGPVQTFTTLAMIAHMEN 294
Query: 390 DAVSKGAKVLLGGRRHSL--GMTFYEPTVLS--------NVKSEMLVSREEVFGPVAPLL 439
G+ +L G+ + Y V S +K+ LV+ EE+FGP A ++
Sbjct: 295 LL---GSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILKTYELVT-EEIFGPFAIVV 350
Query: 440 CFKTEEEA--IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 495
+K ++ A + + + L A I++N+ + L T VAP
Sbjct: 351 EYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILRGRTGVAP 408
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 5e-22
Identities = 123/453 (27%), Positives = 195/453 (43%), Gaps = 55/453 (12%)
Query: 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD-AFNSWSK 110
+ + Q + G+W G+ +H+ TGE +A VS G + A++ A + +
Sbjct: 2 MQKLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSS-EGLDFAAALAYAREVGGPALRA 59
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR- 169
LT ER+ L+ L+ KEEL L + + G +++ +++ G + YA + +R
Sbjct: 60 LTFHERAAMLKALAKYLLERKEELYAL-SAQTGATRRDSWIDIEGGIGTLFTYASKGRRE 118
Query: 170 -------VYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 218
V GE+ P T R + + GVA I +NFP+ + K+ PA G
Sbjct: 119 LPNDTVLVEGEVEPLSKGGTFAGRHILTPLE--GVAVHINAFNFPVWGMLEKLAPAFLAG 176
Query: 219 CTVVVKPSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTG 277
+VKP+ T A L +++G+ P G + ++ G+A D+ D L V +TFTG
Sbjct: 177 VPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAGDLLDH-LDGQDV--VTFTG 233
Query: 278 STAVGKKLMAGAAGTVKKV-------SLELGGNAPCIVFDDA-------DLNV-AVNGAL 322
S A +KL A V SL NA I+ DA DL V V +
Sbjct: 234 SAATAQKLRAHPNVVANSVPFTAEADSL----NA-AILGPDATPGTPEFDLFVKEVVREM 288
Query: 323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 382
K +GQ C R +V + + +A + + VGD EGV G L + E
Sbjct: 289 TVK---AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQRE 345
Query: 383 KVETFVEDAVSKGAKVLLGGRRHSLGM-------TFYEPTVLS--NVKSEMLVSREEVFG 433
V V A+ A+++ GG + F+ PT+L + V E FG
Sbjct: 346 DVREKV-AALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPAVHDVEAFG 404
Query: 434 PVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
PV+ L+ + +EAI +A L A + T +
Sbjct: 405 PVSTLMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 5e-10
Identities = 108/429 (25%), Positives = 168/429 (39%), Gaps = 68/429 (15%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAE 115
L+ GKW A + + +P G+ +V E + + S S + L E
Sbjct: 2 LVAGKWKGASN--YTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPE 59
Query: 116 RSKGLRKWYDLLMAHKEELGQ---------LITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
R + D+ EL + LI K +A+GEV KF+E +A +
Sbjct: 60 R---YLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGD 116
Query: 167 AKRVY--GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
R +P ++ + P G ITP+NFPL + ++ AL G ++K
Sbjct: 117 QVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLK 176
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
+ L G+P V+++ + P + LL + R FTGS+ V ++
Sbjct: 177 VDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEA-NPRMTLFTGSSKVAER 235
Query: 285 LMAGAAGTVKKVSLELGGN-----APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 339
L A KV LE G P + D A A SGQ C A +
Sbjct: 236 L---ALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYAC----SGQKC-SAQSI 287
Query: 340 L------VQEGIYEKFAD-AFSKAVKNLKVGDGFGEGVVQGPLI---NKAALEKVETFVE 389
L VQ GI +K A + +++L + GP++ + L+ V+ +
Sbjct: 288 LFAHENWVQAGILDKLKALAEQRKLEDLTI----------GPVLTWTTERILDHVDKLLA 337
Query: 390 DAVSKGAKVLLGGR---RHSLGMTF--YEPTV----LSNVKSEM---LVSREEVFGPVAP 437
GAKVL GG+ HS+ + YEPT L + E LV+ EVFGP
Sbjct: 338 ---IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTT-EVFGPFQV 393
Query: 438 LLCFKTEEE 446
+ +K E+
Sbjct: 394 VTEYKDEQL 402
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 59.8 bits (146), Expect = 1e-09
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 69/311 (22%)
Query: 189 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAG 244
+PVGV A+ P P + K AL ++ P ++ AA++ A+ AG
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 245 IPPGVVNVVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 301
P G++ + P I L+ P V I TG M AA + K ++ +G
Sbjct: 154 APEGLIQWI--EEPSIELTQELMKHPDVDLILATGGPG-----MVKAAYSSGKPAIGVGP 206
Query: 302 GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCA--NRVLVQEGIYEKFADAFSKAVK 358
GN P + + AD+ AV + +K F N +CA V+V + IY++ +
Sbjct: 207 GNVPAYIDETADIKRAVKDIILSKTFDNG---TICASEQSVIVDDEIYDEVRAELKR--- 260
Query: 359 NLKVGDGFGEGVVQGPLINKAALEKVETFVE--------DAVSKGAKVLLGGRRHSLGMT 410
G +N+ EK+E + D V K A+ + G+
Sbjct: 261 ---------RGAY---FLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAEL----AGIE 304
Query: 411 FYEPTVLSNVKSEMLVSREEVFGP--------VAPLLCF---KTEEEAIHMAND--TNAG 457
E T + LV+ E GP ++P+L F + EEA+ A + G
Sbjct: 305 VPEDTKV-------LVAEETGVGPEEPLSREKLSPVLAFYRAEDFEEALEKARELLEYGG 357
Query: 458 LA--AYIFTNN 466
A I +N+
Sbjct: 358 AGHTAVIHSND 368
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 6e-09
Identities = 96/401 (23%), Positives = 150/401 (37%), Gaps = 64/401 (15%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG------KPLK-E 148
DA+++A A + K T A+R K + + L+++ EEL ++ E G K K
Sbjct: 8 DAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKIAKNH 67
Query: 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQ-PVGVAGAITPWNFPLAMI 207
E G E A G D L +++ P GV GAITP P I
Sbjct: 68 LAAEKTPG---TEDLTTTA--WSG--------DNGLTLVEYAPFGVIGAITPSTNPTETI 114
Query: 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDA 263
LA G VV P + A EL +AG P +V V + +
Sbjct: 115 INNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNE 174
Query: 264 LLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL-NVAVNGAL 322
L+ P + + TG AV K ++ + KK GN P +V + AD+ A +
Sbjct: 175 LMAHPDINLLVVTGGPAVVKAALS----SGKKAIGAGAGNPPVVVDETADIEKAARDIVQ 230
Query: 323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 382
A F N+ C+ V+ + + + A + G L ++ A +
Sbjct: 231 GASFDNN-LPCIAEKEVIAVDSVADYLIAAMQR------------NGAYV--LNDEQAEQ 275
Query: 383 KVETFVEDA---------VSKGAKVLLGGRRHSLGMTFYEPTVLSNV---KSEMLVSREE 430
+E + V K A +L + G+ L V K V EE
Sbjct: 276 LLEVVLLTNKGATPNKKWVGKDASKILK----AAGIEVPADIRLIIVETDKDHPFVV-EE 330
Query: 431 VFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQR 469
P+ P++ K +EAI +A + G A I + N++
Sbjct: 331 QMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 6e-09
Identities = 67/257 (26%), Positives = 104/257 (40%), Gaps = 28/257 (10%)
Query: 214 ALACGCTVVVKPSEFTPL----TALAAAELALQAGIPPGVVNVVMGNAPD-IGDALLTSP 268
+LA G V+VKP L T A E+ +AG P +V + + I L T P
Sbjct: 217 SLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRP 276
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR- 327
+VR I FTGS A G L A A +V E G +V D D A+ LA
Sbjct: 277 EVRIIDFTGSNAFGDWLEANARQ--AQVYTEKAGVNTVVV-DSTDDLKAMLRNLAFSLSL 333
Query: 328 NSGQTCVCANRVLV-QEGI--------YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 378
SGQ C + V ++GI +++ A + A+ L + D + G + +
Sbjct: 334 YSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSP 392
Query: 379 AALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGP 434
L ++ + +VLL + P +L S+ EE FGP
Sbjct: 393 DTLARIA-----EARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGP 447
Query: 435 VAPLLCFKTEEEAIHMA 451
+A ++ + + +I +A
Sbjct: 448 IAFVVATDSTDHSIELA 464
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 2e-08
Identities = 103/429 (24%), Positives = 163/429 (37%), Gaps = 75/429 (17%)
Query: 73 EVHNPATGEVIANVSCMGGKET-KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131
E+ + T A V MG + DA+++A A + + + A R + + + L+ H
Sbjct: 16 EMLSSQTVSPPAAVGEMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHA 75
Query: 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--EIIPATLPDRRLFVLKQ 189
EEL +L E G +G V+ K + A A++ G ++ L L +
Sbjct: 76 EELAELAVEETG------MGRVE--DKIAKNVAA-AEKTPGVEDLTTEALTGDNGLTLIE 126
Query: 190 --PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQA 243
P GV GA+TP P I LA G +VV P +L A EL + A
Sbjct: 127 YAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAA 186
Query: 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGN 303
G P +V V + L+ P + + TG AV K M + KK GN
Sbjct: 187 GGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGN 242
Query: 304 APCIVFDDADLNVA----VNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359
P +V + AD+ A V G A F N+ C+ V+V + + ++ K
Sbjct: 243 PPVVVDETADIEKAARDIVKG---ASFDNN-LPCIAEKEVIVVDSVADELMRLMEK---- 294
Query: 360 LKVGDGFGEGVVQGPLINKAALEKVETFV--------EDAVSKGAKVLLGGRRHSLGMTF 411
G V + EK++ V + V K A +L G+
Sbjct: 295 --------NGAVL---LTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEA----AGINV 339
Query: 412 YEPTVL---------SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AA 460
+ T L V +E+++ PV P++ K +EAI +A G A
Sbjct: 340 PKDTRLLIVETDANHPFVVTELMM-------PVLPVVRVKDVDEAIALAVKLEHGNRHTA 392
Query: 461 YIFTNNLQR 469
+ + N+
Sbjct: 393 IMHSRNVDN 401
|
Length = 465 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 1e-07
Identities = 72/266 (27%), Positives = 108/266 (40%), Gaps = 28/266 (10%)
Query: 190 PVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT----PLTALAAAELALQAGI 245
P G+A I FP + +LA G V+VKP LT A E+ +AG
Sbjct: 193 PRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGF 252
Query: 246 PPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 304
P +V + + + L T P VR I FTGS A G+ L A +V E G
Sbjct: 253 DPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQA--QVYTEKAGVN 310
Query: 305 PCIVFDDADLN-VAVNGALAAKFRNSGQTCVCANRVLV-QEGI--------YEKFADAFS 354
I+ D + N A + SGQ C +LV ++GI Y++ A +
Sbjct: 311 TVIIESTDDYKAMLRNLAFSLSLY-SGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLA 369
Query: 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMT 410
A+ L +GD V G + + L + + +A + G +VLL + G
Sbjct: 370 TAIDGL-LGDPARATAVLGAIQSPDTLAR----IAEARALG-EVLLASTKIEHPEFPGAR 423
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVA 436
P +L ++ +E FGP+A
Sbjct: 424 VRTPLLLKCDAADEAAYMQERFGPIA 449
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 4e-07
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 24/269 (8%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY 155
DA+++A A S + R + + +L +L E G E
Sbjct: 3 DAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVED------ 56
Query: 156 GAKFIE--FYAEEAKRVY-GEIIPATLPDRRLF---VLKQPVGVAGAITPWNFPLAMITR 209
K I+ F AE VY E L ++ +P+GV +ITP P + +
Sbjct: 57 --KVIKNHFAAEYIYNVYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIF 114
Query: 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG--NAPDI--GDALL 265
K +L +++ P AA L LQA + G ++G + P I L+
Sbjct: 115 KSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLM 174
Query: 266 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAA 324
P + + TG AV K AA + K ++ +G GN P ++ + AD+ AV + +
Sbjct: 175 KFPGIGLLLATGGPAVVK-----AAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAF 353
K ++G C V+V + +Y++ F
Sbjct: 230 KTFDNGVICASEQSVIVVDSVYDEVMRLF 258
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 50/270 (18%), Positives = 105/270 (38%), Gaps = 14/270 (5%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG-KPLKEAV 150
++ ++ I SA A + +T + K ++ D + +L ++ E G ++ V
Sbjct: 8 QQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKV 67
Query: 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
+ + A + ++ K + I+ + + + PVGV + P P + K
Sbjct: 68 IKNVFAATIVYDSIKDMKTI--GILSEDKEKK-VIEIAVPVGVVAGLIPSTNPTSTAIYK 124
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLT 266
++ +V P + +L A +AG P G + + + + L+
Sbjct: 125 TLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMK 184
Query: 267 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAK 325
+ I TG A M AA + ++ +G GN P + A++ AV + +K
Sbjct: 185 NKDTSLILATGGEA-----MVKAAYSSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSK 239
Query: 326 FRNSGQTCVCANRVLVQEGIYEKFADAFSK 355
++G C ++V+E + + K
Sbjct: 240 TFDNGTICASEQSIIVEECNKDAVVEELKK 269
|
Length = 488 |
| >gnl|CDD|237515 PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 8e-05
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 190 PVGVAGAITPWNFP---------LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL- 239
PVGV ITP P +A+ TR ++ +++AAA++
Sbjct: 108 PVGVIAGITPTTNPTSTAIFKALIALKTR---------NPIIFSFHPRAQKSSIAAAKIV 158
Query: 240 ---ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296
A+ AG P ++ + + ++ +AL+ P + I TG M AA + K
Sbjct: 159 LDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPG-----MVKAAYSSGKP 213
Query: 297 SLELG-GNAPCIVFDDADLNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFS 354
+L +G GN P + AD+ AVN L +K F N G C V+V + IY++ + F+
Sbjct: 214 ALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDN-GMICASEQAVIVDDEIYDEVKEEFA 272
Query: 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388
+NK L+K+E F+
Sbjct: 273 SH---------------GAYFLNKKELKKLEKFI 291
|
Length = 862 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 46/192 (23%), Positives = 68/192 (35%), Gaps = 18/192 (9%)
Query: 169 RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
+ ++P +V P+GV I P PL+ IT +A + +P
Sbjct: 82 HIQDVLLPDNG---ETYVRAFPIGVTMHILPSTNPLSGIT-SALRGIATRNQCIFRPHPS 137
Query: 229 TPLTALAAAELALQAGIPPGVVN--VVMGNAPDI--GDALLTSPQVRKITFTGSTAVGKK 284
P T A A L QA V+ P + LL+ P++ I TG
Sbjct: 138 APFTNRALA-LLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDA 196
Query: 285 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR-----NSGQTCVCANRV 339
A V GN+P +V + AD A +KF S Q + V
Sbjct: 197 --AVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQNACASEQNLYVVDDV 254
Query: 340 LVQEGIYEKFAD 351
L + +YE+F
Sbjct: 255 L--DPLYEEFKL 264
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.94 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.76 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 99.43 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.19 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.77 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.62 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.1 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.99 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 96.97 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 96.68 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 96.56 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 96.48 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 96.16 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 95.64 | |
| PLN02926 | 431 | histidinol dehydrogenase | 95.61 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 85.22 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 83.71 |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-122 Score=890.89 Aligned_cols=476 Identities=66% Similarity=1.052 Sum_probs=465.5
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
+.+.||+|+|+++.++++|+|.||++||.|+.+++.+.+|.++||++|.+||++|+.++..+|.++|++|.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|.|||+.||++||.++..+++||++++++.+|..++...+.+..++.++|+||+++|+|||||.++..++..+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999988888899999999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCC---chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
||++||+||+||+++||++++.++++.++||+|+|++|+|+++ ..++|+.|+.+|+|++|+||||+.+|+.++.+++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999963 4589999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
.++|++++|||||.|+||++|||+|+|++..+.++|.++||.|.+.+|+|||++|||+|+++|.++++++++||.+|+++
T Consensus 263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~t 342 (503)
T KOG2451|consen 263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGT 342 (503)
T ss_pred hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-CCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+.||+|+..+.++++.++++|+++||++++||+.. +.+++|++|||+.+++.+|.+.+||+|||+.+|++|+|+||+|+
T Consensus 343 t~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEvi~ 422 (503)
T KOG2451|consen 343 TQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEVIE 422 (503)
T ss_pred ccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHHHH
Confidence 99999999999999999999999999999999954 36779999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCCC
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNR 529 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~~ 529 (530)
++|+++.||++|+||+|.++..+++++|++|+|.+|...+++...||||+|+||+||||+.+|+++|+..|+|++++|..
T Consensus 423 ~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L~~ 502 (503)
T KOG2451|consen 423 WANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTLPI 502 (503)
T ss_pred HhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998864
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-114 Score=872.85 Aligned_cols=471 Identities=46% Similarity=0.724 Sum_probs=455.8
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.+.||||+|+++.++++++++||.||+++++|+.++.+|++.++++|++||+ .|+.++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 3689999999999999999999999999999999999999999999999999 69999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
.|+.+.+.+.|||+.+++ .++..+++.++||+.++....+..++.. .....++.++|+|||+.|+|||||+.+..|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~-~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTD-GEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCC-CceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 8999999999999999988877665543 35678999999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
+|||++||+||+||+++||++++.++++++++|+|+||+|+|+|.|.+.+.+|++|++|++|+||||+.+|+.|+++++.
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aaa~ 259 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAAAE 259 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCC
Q 009618 292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEG 369 (530)
Q Consensus 292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 369 (530)
++|++++|||||+|.||++|||+|.|++.++.+.|+|+||+|++.+|+|||+++||+|+++++++.++ +++|||+++.
T Consensus 260 ~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~ 339 (501)
T KOG2450|consen 260 SNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEG 339 (501)
T ss_pred cCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCCCcc
Confidence 58999999999999999999999999999999999999999999999999999999999999999966 9999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+.+||++++.|++++.++|+.++++||++++||.+....|+|++|||+.++.++|.+++||+||||+.|++|++.||+|+
T Consensus 340 ~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~ 419 (501)
T KOG2450|consen 340 TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEEVIE 419 (501)
T ss_pred cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHHHHH
Confidence 99999999999999999999999999999999988655689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|++.|||+++|||+|.++++++++++++|+||||++...+...||||+|+||+||+.|.+++++|++.|+|+++.
T Consensus 420 ~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v~~ 496 (501)
T KOG2450|consen 420 RANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTVKL 496 (501)
T ss_pred HhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999873
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-108 Score=876.84 Aligned_cols=475 Identities=58% Similarity=1.030 Sum_probs=451.7
Q ss_pred CCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
.+...++||+|+|+.+.++.+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++
T Consensus 7 ~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~ 86 (482)
T PRK11241 7 TLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEH 86 (482)
T ss_pred ccccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 33345689999999866678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
+++|++++++|+|||+.+++.|+..+++.++||+..+++..+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus 87 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (482)
T PRK11241 87 QDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 166 (482)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHH
Confidence 99999999999999999999999999999999999988776665444334556788999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+++|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa 246 (482)
T PRK11241 167 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCA 246 (482)
T ss_pred HHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 247 ~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~ 326 (482)
T PRK11241 247 KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGV 326 (482)
T ss_pred hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||++++.+++++++++++++.+|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~ 406 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQ 406 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999764335799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||++||||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 407 aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 407 ANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred hhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 999999999999999999999999999999999999877677889999999999999999999999999999875
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-107 Score=860.46 Aligned_cols=465 Identities=52% Similarity=0.853 Sum_probs=445.1
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
+.||+|+|+.... +++++||.||+++++++.++.+|++.|+++|++||+.|+.+++.+|.++|++++++|++|+++|+
T Consensus 2 ~~~i~g~~~~~~~--~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela 79 (472)
T COG1012 2 KLLIDGEWVDGAS--TIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELA 79 (472)
T ss_pred CccCCCeecCCCC--ceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4699999999644 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+|||+.+++.|+..+++.++||++.+++..+...+... +...+++++|+|||++|+|||||+.+.+|++++||
T Consensus 80 ~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apAL 158 (472)
T COG1012 80 ALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPAL 158 (472)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999988777644333 67889999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|.+.+.++.|+.||+|++|+||||+++|+.|++.+++++||
T Consensus 159 aaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k~ 238 (472)
T COG1012 159 AAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKP 238 (472)
T ss_pred HcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999997777999999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCCcccCc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVVQGP 374 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~~Gp 374 (530)
+++|||||||+||++|||+|.|++.+++++|+|+||+|++.+|+|||+++||+|+++|.++ ++ +++|||.|++|++||
T Consensus 239 ~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gp 317 (472)
T COG1012 239 VTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGP 317 (472)
T ss_pred EEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999 65 999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC
Q 009618 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT 454 (530)
Q Consensus 375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~ 454 (530)
+++.++++++.+++++++.+|++++.||... . |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 318 li~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~-~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t 395 (472)
T COG1012 318 LISEEQLDRVEGYIEDAVAEGARLLAGGKRP-G-GYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDT 395 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC-C-CeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999999843 3 7999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 455 NAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 455 ~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+|||+++|||+|..++.++++++++|+||||++.. ....+||||+|.||+|+++|.+++++|++.|+|+...
T Consensus 396 ~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 396 EYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred CCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 99999999999999999999999999999999853 4467999999999999999999999999999998764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-106 Score=863.18 Aligned_cols=492 Identities=82% Similarity=1.267 Sum_probs=465.3
Q ss_pred cccccccchhhhccCCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHH
Q 009618 37 SVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116 (530)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R 116 (530)
.|+.++...+++.+.+.+.++||+|+|+.+.++++++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R 86 (498)
T PLN02278 7 SMDAQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASER 86 (498)
T ss_pred ccccHHHHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 34444545677777777888999999998656789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEE
Q 009618 117 SKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGA 196 (530)
Q Consensus 117 ~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~ 196 (530)
.++|++++++|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+...+...++...+++++|+|||++
T Consensus 87 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~ 166 (498)
T PLN02278 87 SKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGA 166 (498)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEE
Confidence 99999999999999999999999999999999999999999999999999988776655544445567788999999999
Q ss_pred ECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEee
Q 009618 197 ITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276 (530)
Q Consensus 197 i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ft 276 (530)
|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.||+|++|+||
T Consensus 167 I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fT 246 (498)
T PLN02278 167 ITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKITFT 246 (498)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999998777888999999999999999
Q ss_pred CCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618 277 GSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356 (530)
Q Consensus 277 Gs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 356 (530)
||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 247 GS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~ 326 (498)
T PLN02278 247 GSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKA 326 (498)
T ss_pred CcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceE
Q 009618 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA 436 (530)
Q Consensus 357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~ 436 (530)
++++++|+|+++++++||++++.+++++.+++++++++|+++++||.....+++|++|||+.+++++|++++||+||||+
T Consensus 327 ~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl 406 (498)
T PLN02278 327 VQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVA 406 (498)
T ss_pred HHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEE
Confidence 99999999999999999999999999999999999999999999997643357999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhh
Q 009618 437 PLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEF 516 (530)
Q Consensus 437 ~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~ 516 (530)
+|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|
T Consensus 407 ~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f 486 (498)
T PLN02278 407 PLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEY 486 (498)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999777667899999999999999999999999
Q ss_pred heeeEEEEecCC
Q 009618 517 LEIKYVCLGDMN 528 (530)
Q Consensus 517 ~~~k~v~~~~~~ 528 (530)
++.|+|++++|+
T Consensus 487 t~~k~i~~~~~~ 498 (498)
T PLN02278 487 LEIKYVCLGNMN 498 (498)
T ss_pred heeEEEEEecCC
Confidence 999999998875
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-106 Score=864.79 Aligned_cols=472 Identities=32% Similarity=0.498 Sum_probs=446.9
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||.||+++++++.++.+|++.|+++|++||+.|+.++..+|+++|++++++|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999876678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||+.+++.|+..+++.++||++.+....+...+....+...+++++|+|||++|+|||||+...++++++
T Consensus 193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iap 272 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPV 272 (604)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877765443334556788999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.++.|+.|++|++|+||||+.+|+.|++.+++++
T Consensus 273 ALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~-~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa~~l 351 (604)
T PLN02419 273 AVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT-NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG 351 (604)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC-hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999985 467899999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++ +|+|+++|.++++++++|+|.|+++++|
T Consensus 352 k~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~l~vG~p~d~~t~~G 430 (604)
T PLN02419 352 KRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKALKVTCGSEPDADLG 430 (604)
T ss_pred CcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc---C-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRH---S-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~---~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
|++++.+++++.+++++|+.+||++++||... . .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+
T Consensus 431 Plis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~dEAI~ 510 (604)
T PLN02419 431 PVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAIS 510 (604)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCHHHHHH
Confidence 99999999999999999999999999999753 1 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|+++|||++||||+|.++++++++++++|+||||+.... .+.+||||+|.||+| +++|.+|+++|++.|+|+++.
T Consensus 511 laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 590 (604)
T PLN02419 511 IINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKLVTQKQ 590 (604)
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEEEEEcc
Confidence 99999999999999999999999999999999999987543 467999999999999 789999999999999998875
Q ss_pred C
Q 009618 527 M 527 (530)
Q Consensus 527 ~ 527 (530)
-
T Consensus 591 ~ 591 (604)
T PLN02419 591 K 591 (604)
T ss_pred C
Confidence 3
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-104 Score=849.21 Aligned_cols=474 Identities=41% Similarity=0.676 Sum_probs=449.2
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
..+.||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+ .|+.++.++|+++|++++++|++++
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 99 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHI 99 (501)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 45679999999876678999999999999999999999999999999999997 5999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||+.+++ .|+..+++.++||++.+.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 178 (501)
T PLN02766 100 EELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMS-RQLQGYTLKEPIGVVGHIIPWNFPSTMFFMK 178 (501)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEeccceEEEEECCCCChHHHHHHH
Confidence 9999999999999999997 5999999999999999887766543322 2345678999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.||+|+.|+||||+.+|+.|++.++
T Consensus 179 ~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 258 (501)
T PLN02766 179 VAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAA 258 (501)
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999998
Q ss_pred -cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 291 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 291 -~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++
T Consensus 259 ~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~ 338 (501)
T PLN02766 259 TSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPR 338 (501)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++.++|++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 339 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~deai~ 418 (501)
T PLN02766 339 ARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIK 418 (501)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976433578999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCC
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 528 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 528 (530)
++|+++|||++||||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++...+
T Consensus 419 ~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~~ 497 (501)
T PLN02766 419 KANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQVKSVVTPLYN 497 (501)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEeccc
Confidence 9999999999999999999999999999999999998777778899999999999999999999999999999887543
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-104 Score=842.86 Aligned_cols=468 Identities=36% Similarity=0.618 Sum_probs=443.8
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||+|+|+.+ ++.+++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|
T Consensus 2 ~~~~i~g~~~~~-~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 80 (472)
T TIGR03374 2 HKLLINGELVSG-EGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVF 80 (472)
T ss_pred CCceECCEEecC-CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 467999999975 4788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
++++++|+|||..++. .|+..+++.++||+..++.+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 81 AELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 9999999999999997 599999999999998887766543332223556789999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 239 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSI 239 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999885 9999999999977788999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++|
T Consensus 240 ~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~G 319 (472)
T TIGR03374 240 KRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELG 319 (472)
T ss_pred cceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~G-a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
|+++..+++++.++|++++++| +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 320 pli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an 399 (472)
T TIGR03374 320 PLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWAN 399 (472)
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHHHHHh
Confidence 9999999999999999999999 799999976433478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++|||++||||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 400 ~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 400 DSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999987777789999999999999999999999999999875
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-103 Score=838.99 Aligned_cols=471 Identities=37% Similarity=0.655 Sum_probs=446.0
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4579999999876678999999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCC--CC-ceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATL--PD-RRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~--~g-~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
+|++++++|+|||+.++. .|+..+++.++||+.++++..+...+... ++ ...+.+++|+|||++|+|||||+...+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 69999999999999988877665443221 22 246789999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 245 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKS 245 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred Hhc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 289 AAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 289 ~a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++
T Consensus 246 aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~ 325 (486)
T cd07140 246 CAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLD 325 (486)
T ss_pred HHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCC
Confidence 996 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE 445 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~ 445 (530)
+++++||++++.+++++.++|++++.+||++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+ |++
T Consensus 326 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~ 405 (486)
T cd07140 326 RSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVD 405 (486)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCCCHH
Confidence 999999999999999999999999999999999997643457899999999999999999999999999999998 699
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++||++|++.|+|+++
T Consensus 406 eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 485 (486)
T cd07140 406 GVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKTVTIE 485 (486)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcEEEEEEe
Confidence 99999999999999999999999999999999999999999877777899999999999999999999999999999874
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-103 Score=843.95 Aligned_cols=474 Identities=43% Similarity=0.679 Sum_probs=449.1
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
..+.||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+. |+.++.++|.++|++++++|++++
T Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 136 (538)
T PLN02466 57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN 136 (538)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 346799999998767899999999999999999999999999999999999984 999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||+.+++ .|+..+++.++||+.++.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~ 215 (538)
T PLN02466 137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK 215 (538)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence 9999999999999999996 5999999999999999888776655432 2345688999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+.+..|+.||+|++|+||||+.+|+.|++.++
T Consensus 216 i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~~aa 295 (538)
T PLN02466 216 VGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAA 295 (538)
T ss_pred HhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999998
Q ss_pred c-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 291 G-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 291 ~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++.++++|+|+|++
T Consensus 296 ~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~ 375 (538)
T PLN02466 296 KSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKG 375 (538)
T ss_pred hcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCC
Confidence 5 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||+++.++++++++++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 376 ~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~ 455 (538)
T PLN02466 376 VEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIR 455 (538)
T ss_pred CCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976533578999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEecCC
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMN 528 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~~~ 528 (530)
++|+++|||+++|||+|.+++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++...+
T Consensus 456 ~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~~~ 534 (538)
T PLN02466 456 RANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKN 534 (538)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEEEeCCC
Confidence 9999999999999999999999999999999999998777777899999999999999999999999999999876543
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-103 Score=836.42 Aligned_cols=468 Identities=39% Similarity=0.649 Sum_probs=443.4
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
+||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 589999998766788999999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCC-----CCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL-----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~-----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
+++++|+|||..+++. |+..+++.++|+++++....+...+... .+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 9999999999999888776665432211 124567899999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++. .+..|+.|++|++|+||||+++|+.|++.+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~~~a 240 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDVAKVSFTGSVATGKKIGRQA 240 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 889999999999999999999999999999
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 241 a~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 320 (477)
T cd07113 241 ASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDES 320 (477)
T ss_pred HhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~deai~ 400 (477)
T cd07113 321 VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQ 400 (477)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976433478999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.++++++++++++|+||||++...++.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 401 ~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 476 (477)
T cd07113 401 LINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVMIR 476 (477)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999998877778899999999999999999999999999999764
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-102 Score=835.04 Aligned_cols=468 Identities=31% Similarity=0.510 Sum_probs=441.6
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+ +.+++++||.||+++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 20 ~~~~~I~G~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 97 (508)
T PLN02315 20 NLGCYVGGEWRAN--GPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDY 97 (508)
T ss_pred ccCceECCEEecC--CCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHH
Confidence 4568999999864 68899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||+.+++.|+..+++.++||++.++.+.+...+...++...+..++|+|||++|+|||||+.++++++++
T Consensus 98 la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 177 (508)
T PLN02315 98 LGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACI 177 (508)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHHhH
Confidence 99999999999999999999999999999999888876665554333455677899999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHH----HHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 214 ALACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
||++||+||+|||+.+|+++.. +.+++.++|+|+|++|++++ +.+.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~a 256 (508)
T PLN02315 178 ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTV 256 (508)
T ss_pred HHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999999887 67888999999999999998 778899999999999999999999999999999
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+.+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|.++++++++|+|++++
T Consensus 257 a~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~ 336 (508)
T PLN02315 257 NARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKG 336 (508)
T ss_pred HhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||+++..+.+++.+++++++++|+++++||...+.+|+|++|||+ +++++|++++||+||||++|++|+|+||||+
T Consensus 337 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 415 (508)
T PLN02315 337 TLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIE 415 (508)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999764345799999999 5999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHh--hccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSE--ALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~--~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.++++++++ ++++|+||||+.... .+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~ 494 (508)
T PLN02315 416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTIN 494 (508)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhhEEEEEEe
Confidence 99999999999999999999999985 799999999986554 46789999999999999999999999999998875
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-102 Score=833.98 Aligned_cols=471 Identities=40% Similarity=0.650 Sum_probs=446.8
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
...++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|+++++
T Consensus 5 ~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (488)
T PRK13252 5 PLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERND 84 (488)
T ss_pred ccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34678999999986667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..+++ .|+..+++.++||++.+....+...+.. .+...+.+++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~ 163 (488)
T PRK13252 85 ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACWKS 163 (488)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHH
Confidence 999999999999999998 4999999999999998877666544322 24567889999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++. .++.|+.|++|+.|+||||+++|+.|.+.++.
T Consensus 164 ~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa~ 242 (488)
T PRK13252 164 APALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAA 242 (488)
T ss_pred HHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999998665 88999999999999999999999999999999
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++++
T Consensus 243 ~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 322 (488)
T PRK13252 243 SLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATN 322 (488)
T ss_pred cCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
+||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 323 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ea 402 (488)
T PRK13252 323 FGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEV 402 (488)
T ss_pred ccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999996432 24789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 403 i~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~~ 480 (488)
T PRK13252 403 IARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIKSVQVE 480 (488)
T ss_pred HHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceEEEEEe
Confidence 999999999999999999999999999999999999998776667899999999999999999999999999999875
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-102 Score=832.09 Aligned_cols=469 Identities=42% Similarity=0.706 Sum_probs=445.4
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|+++++
T Consensus 4 ~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07142 4 TKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHAD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHH
Confidence 45799999998666789999999999999999999999999999999999975 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..+++ .|+..+++.++||+.++++..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 84 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 84 ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 999999999999999997 4999999999999998887766654432 23456789999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~~aa~ 242 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAK 242 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777789999999999999999999999999999987
Q ss_pred -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|+++++
T Consensus 243 ~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 322 (476)
T cd07142 243 SNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGV 322 (476)
T ss_pred cCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||++++.+++++.+++++++.+|+++++||.....+++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 ~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 402 (476)
T cd07142 323 EQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKR 402 (476)
T ss_pred cCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765345789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 403 ~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 476 (476)
T cd07142 403 ANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVVM 476 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEeC
Confidence 99999999999999999999999999999999999887777889999999999999999999999999999863
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-102 Score=828.34 Aligned_cols=468 Identities=39% Similarity=0.654 Sum_probs=444.6
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
+.||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 46999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 136 QLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
+++++|+|||+.+++. |+..+++.++||+..+++..+...+.. .+...+++++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 9999999999999985 999999999999988877665543322 24456889999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+.++.|+.|++|+.|+||||+.+|+.|++.++++++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAKKLI 239 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999985 99999999998777889999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 374 (530)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|+++++++||
T Consensus 240 ~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gp 319 (475)
T cd07117 240 PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGA 319 (475)
T ss_pred cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++++.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 320 li~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~ 399 (475)
T cd07117 320 QVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDM 399 (475)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHHHHHHH
Confidence 99999999999999999999999999997642 24789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||+++|||+|.+++.++++++++|+|+||++...++.+||||+|+||+|+++|++|+++|++.|+|++.
T Consensus 400 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~~ 474 (475)
T cd07117 400 ANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYID 474 (475)
T ss_pred HhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999777777899999999999999999999999999999764
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-102 Score=831.31 Aligned_cols=472 Identities=44% Similarity=0.699 Sum_probs=448.4
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhc-----HhhhcCCHHHHHHHHHHHHHHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-----NSWSKLTAAERSKGLRKWYDLLM 128 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~-----~~w~~~~~~~R~~iL~~~a~~l~ 128 (530)
+.++||+|+|+.+.++.+++++||.||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|+
T Consensus 7 ~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~ 86 (503)
T PLN02467 7 RRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKIT 86 (503)
T ss_pred ccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHH
Confidence 4578999999987667899999999999999999999999999999999999 89999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-CCC--CCCceeEEEEeeceEEEEECCCCcchH
Q 009618 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-PAT--LPDRRLFVLKQPVGVAGAITPWNFPLA 205 (530)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~ 205 (530)
+++++|++++++|+|||+.+++.|+..+++.++||+..++++.+... +.. ..+...+++++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T PLN02467 87 ERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLL 166 (503)
T ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHH
Confidence 99999999999999999999999999999999999999988766532 111 123457889999999999999999999
Q ss_pred HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHH
Q 009618 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (530)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (530)
+.++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+.++.|+.|++|+.|+||||+.+|+.|
T Consensus 167 ~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~v 246 (503)
T PLN02467 167 MATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKI 246 (503)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999777889999999999999999999999999
Q ss_pred HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus 247 ~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p 326 (503)
T PLN02467 247 MTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDP 326 (503)
T ss_pred HHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCC
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~ 443 (530)
+|+++++||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 406 (503)
T PLN02467 327 LEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFST 406 (503)
T ss_pred CCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEeeCC
Confidence 99999999999999999999999999999999999997642 2478999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.......+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 407 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~i~ 486 (503)
T PLN02467 407 EDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSVKQVT 486 (503)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999987766678999999999999999999999999999998
Q ss_pred Ee
Q 009618 524 LG 525 (530)
Q Consensus 524 ~~ 525 (530)
+.
T Consensus 487 ~~ 488 (503)
T PLN02467 487 KY 488 (503)
T ss_pred Ee
Confidence 85
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-102 Score=829.31 Aligned_cols=468 Identities=36% Similarity=0.623 Sum_probs=445.5
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999987677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 136 QLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
+++++|+|||+.+++ .|+..+++.++||++......+...+.. .+...+..++|+|||++|+|||||+...++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEID-EDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 4999999999999998877655543322 34567889999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.++++.|+.|++|++|+||||+.+|+.|++.+++++|
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~ 239 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAENLI 239 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999996 99999999999778899999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 295 KVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dA-----D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
|+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|++
T Consensus 240 p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~ 319 (480)
T cd07559 240 PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPE 319 (480)
T ss_pred cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
+++||++++.+++++.+++++++.+||++++||.... ..|+|++|||+.+++++|.+++||+||||++|++|+|+|
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 399 (480)
T cd07559 320 TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEE 399 (480)
T ss_pred CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEeeCCHH
Confidence 9999999999999999999999999999999997642 247899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+|+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 400 eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 479 (480)
T cd07559 400 EAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTKNILVS 479 (480)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999998777777899999999999999999999999999999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-101 Score=827.71 Aligned_cols=468 Identities=38% Similarity=0.614 Sum_probs=442.3
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
++||||+|+. ++++++++||.||+++++++.++.+|++.++++|++||+. |+.++..+|.++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~--~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 79 (481)
T TIGR03216 2 RNFINGAFVE--SGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDF 79 (481)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 4799999997 4789999999999999999999999999999999999997 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCC---CCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 135 GQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATL---PDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~---~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++++++|+|||..++.. |+..+++.++||++.++...+...+... .+...+.+++|+|||++|+|||||+...+++
T Consensus 80 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~ 159 (481)
T TIGR03216 80 LAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWK 159 (481)
T ss_pred HHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHH
Confidence 99999999999999974 9999999999999988776555432211 1345678899999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCch-hHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
+++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++. +.++.|..|++|+.|+||||+.+|+.|++.+
T Consensus 160 ~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 160 VGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998654 4788999999999999999999999999999
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.|++
T Consensus 240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 319 (481)
T TIGR03216 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLKIGVPDDPA 319 (481)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~ 444 (530)
+++||++++.+++++++++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 320 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~~~ 399 (481)
T TIGR03216 320 TNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSE 399 (481)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeCCH
Confidence 9999999999999999999999999999999997532 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
||||+++|+++|||++||||+|.++++++++++++|+||||+....++.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 479 (481)
T TIGR03216 400 EEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNVCI 479 (481)
T ss_pred HHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999987777789999999999999999999999999999976
Q ss_pred e
Q 009618 525 G 525 (530)
Q Consensus 525 ~ 525 (530)
+
T Consensus 480 ~ 480 (481)
T TIGR03216 480 K 480 (481)
T ss_pred e
Confidence 4
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-101 Score=824.49 Aligned_cols=470 Identities=40% Similarity=0.667 Sum_probs=446.0
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
+.++||||+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++
T Consensus 2 ~~~~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 80 (475)
T PRK13473 2 QTKLLINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADE 80 (475)
T ss_pred CccceECCEEecC-CCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999875 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||..+++ .|+..+++.+++|+..++.+.+...+....+...++.++|+|||++|+|||||+...+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 81 FARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 99999999999999996 49999999999999888777665433222344568899999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..+++++.++ +|+|++|++++++.+.+..|+.|++|+.|+||||+++|+.|++.++++
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 239 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADS 239 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999 999999999997788999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus 240 ~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~ 319 (475)
T PRK13473 240 VKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTEL 319 (475)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCC-CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~G-a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
||++++.+++++.++++++..+| +++++||......|+|++|||+.++++++.+++||+||||++|++|+|+||||+++
T Consensus 320 gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 399 (475)
T PRK13473 320 GPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWA 399 (475)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHHHHHH
Confidence 99999999999999999999999 99999997643357899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.+++.++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 400 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~ 473 (475)
T PRK13473 400 NDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVK 473 (475)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEe
Confidence 99999999999999999999999999999999999887777899999999999999999999999999999875
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-101 Score=823.61 Aligned_cols=469 Identities=35% Similarity=0.531 Sum_probs=443.2
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999987567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+|||+.+++.|+..+++.++|++.......+...+....+...+..++|+|||++|+|||||+...++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766665544323355678999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+++++.++|+|+|++|++++ +.+.++.|+.|++|+.|+||||+.+|+.|++.+++++||
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKR 240 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCc
Confidence 9999999999999999999999999999999999999998 457889999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpl 320 (478)
T cd07085 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPV 320 (478)
T ss_pred EEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+++.+++++.+++++++.+||++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~ 400 (478)
T cd07085 321 ISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAII 400 (478)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997532 247899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||++||||+|.++++++++++++|+||||++.... +.+||||+|.||+| +++|++|+++|++.|+|+++
T Consensus 401 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~~~ 477 (478)
T cd07085 401 NANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVTSR 477 (478)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEEEe
Confidence 9999999999999999999999999999999999875543 57899999999999 57899999999999999764
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-101 Score=826.43 Aligned_cols=468 Identities=41% Similarity=0.682 Sum_probs=444.4
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
+.||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46899999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH-HHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK-RVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~-~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
+++++|+|||+.+++.|+..+++.++|+++.+. ...+...+.. +...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVD--THLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCC--CceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999998887 3334433322 3456889999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++++|
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~~l~ 239 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK 239 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999998777888999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 374 (530)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||
T Consensus 240 ~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gp 319 (488)
T TIGR02299 240 RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP 319 (488)
T ss_pred eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-------CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS-------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
++++.+++++.+++++++.+|+++++||.... .+++|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ea 399 (488)
T TIGR02299 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEA 399 (488)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeCCHHHH
Confidence 99999999999999999999999999996532 14789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|+++|||++||||+|.++++++++++++|+||||+.....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 400 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i~~~ 477 (488)
T TIGR02299 400 IEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVALA 477 (488)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEEEEe
Confidence 999999999999999999999999999999999999998777777899999999999999999999999999999875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-101 Score=823.79 Aligned_cols=470 Identities=43% Similarity=0.678 Sum_probs=445.8
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
..++||||+|+.+.++++++++||.||+++++++.++.+|++++++.|++||+ .|+.++.++|.++|+++++.|+++
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERD 85 (481)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHh
Confidence 35679999999876788999999999999999999999999999999999998 699999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 131 KEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
.++|++++++|+|||..++ ..|+..+++.++|+++.+++..+...+.. .+...+.+++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 164 (481)
T cd07141 86 RAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMAAW 164 (481)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHHHH
Confidence 9999999999999999766 56999999999999998888776544322 234568899999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++|+.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 244 (481)
T cd07141 165 KLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAA 244 (481)
T ss_pred HHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778889999999999999999999999999988
Q ss_pred hc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCC
Q 009618 290 AG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368 (530)
Q Consensus 290 a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 368 (530)
+. ++||+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||+++||+|+++|+++++++++|+|+|+
T Consensus 245 a~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 324 (481)
T cd07141 245 GKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDP 324 (481)
T ss_pred hhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 86 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448 (530)
Q Consensus 369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai 448 (530)
++++||++++.+++++.+++++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai 404 (481)
T cd07141 325 KTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVI 404 (481)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999998753347899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++|+++|||++||||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++||+.|+|++
T Consensus 405 ~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 480 (481)
T cd07141 405 ERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVKTVTI 480 (481)
T ss_pred HHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheEEEEE
Confidence 9999999999999999999999999999999999999877777789999999999999999999999999999876
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-101 Score=822.26 Aligned_cols=467 Identities=40% Similarity=0.671 Sum_probs=443.3
Q ss_pred cceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
++||+|+|+.+ +..++++||.| |+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 2 ~~~i~g~~~~~--~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 79 (473)
T cd07097 2 RNYIDGEWVAG--GDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEEL 79 (473)
T ss_pred CceECCEEecC--CCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46999999975 34579999994 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
++++++|+|||..+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 80 a~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~A 159 (473)
T cd07097 80 ARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPA 159 (473)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888776654433345667899999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.|++|++|+||||+.+|+.|++.+++++|
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~ 239 (473)
T cd07097 160 LAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGA 239 (473)
T ss_pred HHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999777889999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 374 (530)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++||
T Consensus 240 ~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gp 319 (473)
T cd07097 240 RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGP 319 (473)
T ss_pred cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
++++.+++++.+++++++.+|+++++||.... .+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|
T Consensus 320 li~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 399 (473)
T cd07097 320 VVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIAN 399 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHHHHh
Confidence 99999999999999999999999999997643 2478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~ 524 (530)
+++|||+++|||+|.++++++++++++|+||||+.... .+.+||||+|.||+| +++|++|+++|++.|+|++
T Consensus 400 ~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 400 DTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV 473 (473)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999987653 468999999999999 8999999999999999863
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-101 Score=821.02 Aligned_cols=467 Identities=38% Similarity=0.634 Sum_probs=444.3
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
+||||+|+.+. +.+++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (478)
T cd07086 1 GVIGGEWVGSG-GETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGR 79 (478)
T ss_pred CcCCCEEecCC-CCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 58999999864 68899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
++++|+|||+.+++.|+..+++.++|++..++++.+...+...++...+..++|+|||++|+|||||+.+.++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALa 159 (478)
T cd07086 80 LVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALV 159 (478)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877765544334556788999999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHHHHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||+||+|||+.+|+++..++++++++ |+|+|++|++++++. .++.|..|++++.|+||||+.+|+.|++.++++
T Consensus 160 aGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa~~ 238 (478)
T cd07086 160 CGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPLVSFTGSTEVGRRVGETVARR 238 (478)
T ss_pred cCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999999 999999999998654 889999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
++++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++
T Consensus 239 ~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 318 (478)
T cd07086 239 FGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLV 318 (478)
T ss_pred CCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
||++++.+++++.+++++++.+|+++++||..... +++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 319 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~ 398 (478)
T cd07086 319 GPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAI 398 (478)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999976432 4789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||+++|||+|.+++++++++ +++|+||||+.... .+.+||||+|.||+|+++|.+++++|++.|+|+++
T Consensus 399 ~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07086 399 NNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 476 (478)
T ss_pred HhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999 99999999987654 46789999999999999999999999999999875
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-100 Score=820.32 Aligned_cols=466 Identities=35% Similarity=0.592 Sum_probs=439.2
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA 81 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 47999999987678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 136 QLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
.++++|+|||+.+++ .|+..+++.++||++......+...+. ..+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 499999999999999887765544332 234457889999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+++|.+.+.+..|+.||+|++|+||||+++|+.|++.+++++|
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~ 239 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASENII 239 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999998 99999999998777889999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecC------CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCC
Q 009618 295 KVSLELGGNAPCIVFDD------ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~d------AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 368 (530)
|+++|||||||+||++| ||+|.|++.++++. +|+||.|++++|||||+++||+|+++|.++++++++|+|+++
T Consensus 240 p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~ 318 (479)
T cd07116 240 PVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDT 318 (479)
T ss_pred eEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999998 79999999999865 589999999999999999999999999999999999999999
Q ss_pred CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444 (530)
Q Consensus 369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~ 444 (530)
++++||++++.+++++++++++++.+|+++++||.... .+|+|++|||+.+++ +|.+++||+||||++|++|+|+
T Consensus 319 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~~~~~~ 397 (479)
T cd07116 319 ETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVTTFKDE 397 (479)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEEEeCCH
Confidence 99999999999999999999999999999999997642 247899999999874 9999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+||++|++.|+|++
T Consensus 398 ~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~~ 477 (479)
T cd07116 398 EEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQTKNLLV 477 (479)
T ss_pred HHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceEEEEE
Confidence 99999999999999999999999999999999999999999877777789999999999999999999999999999976
Q ss_pred e
Q 009618 525 G 525 (530)
Q Consensus 525 ~ 525 (530)
+
T Consensus 478 ~ 478 (479)
T cd07116 478 S 478 (479)
T ss_pred e
Confidence 3
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-100 Score=817.51 Aligned_cols=465 Identities=35% Similarity=0.600 Sum_probs=437.2
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
++|+|+|+.+ +++++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~--~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 78 (474)
T cd07130 1 GVYDGEWGGG--GGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGK 78 (474)
T ss_pred CeECCEEecC--CCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899999984 57899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
++++|+|||+.+++.|+..+++.++|+++..+.+.+...+...++...+..++|+|||++|+|||||+.++++++++||+
T Consensus 79 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 158 (474)
T cd07130 79 LVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALV 158 (474)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHH
Confidence 99999999999999999999999999998877766655444334556788899999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHH----HHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 217 CGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||+||+|||+.+|+++..++++ +.++|+|+|++|+++++ .+.++.|++|++|++|+||||+++|+.|++.++++
T Consensus 159 aGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~-~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 237 (474)
T cd07130 159 CGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG-ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAAR 237 (474)
T ss_pred cCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC-hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhc
Confidence 99999999999999999887766 57999999999999984 56789999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++
T Consensus 238 ~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~ 317 (474)
T cd07130 238 FGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLV 317 (474)
T ss_pred CCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||++++.+++++++++++++++|+++++||...+.+|+|++|||+.++++ |++++||+||||++|++|+|+||||+++|
T Consensus 318 Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN 396 (474)
T cd07130 318 GPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIAWNN 396 (474)
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHh
Confidence 99999999999999999999999999999986433478999999998766 99999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|||+++|||+|.+++++++++ +++|+||||..... .+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 397 ~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 397 EVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred CCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 999999999999999999999987 99999999986543 46799999999999999999999999999998765
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-100 Score=817.08 Aligned_cols=470 Identities=42% Similarity=0.698 Sum_probs=444.9
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH-hhh-cCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWS-KLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~-~w~-~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.+.||+|+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+ .|+ .++.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678899999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..++ ..|+..+++.++|+++++.+..+...+.. .+...+..++|+|||++|+|||||+.+.++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999655 56999999999999999887766544332 34567889999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.||+|+.|+||||+.+|+.|++.+++
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~aa~ 245 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAK 245 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999998885
Q ss_pred -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.++++
T Consensus 246 ~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 325 (481)
T cd07143 246 SNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDT 325 (481)
T ss_pred hcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||++++.+++++.+++++++.+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||++
T Consensus 326 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 405 (481)
T cd07143 326 FQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKR 405 (481)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999765335789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 406 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~~ 480 (481)
T cd07143 406 ANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHIN 480 (481)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEEe
Confidence 999999999999999999999999999999999999877777899999999999999999999999999999864
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-100 Score=821.52 Aligned_cols=473 Identities=26% Similarity=0.400 Sum_probs=441.8
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH-H
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM-A 129 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~-~ 129 (530)
....++||+|+|+.+ ++.+++++||.| |+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+ +
T Consensus 29 ~~~~~~~i~G~~~~~-~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~ 107 (533)
T TIGR01236 29 PIEIPLVIGGEEVMG-SGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGP 107 (533)
T ss_pred CeeeceeECCEEecC-CCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhh
Confidence 456778999999975 467899999997 8999999999999999999999999999999999999999999999999 5
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHHH
Q 009618 130 HKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMI 207 (530)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~ 207 (530)
++++|++++++|+|||+.+++.| +..+++.++|++.++++..+...+....+..+++.++|+ |||++|+|||||+...
T Consensus 108 ~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~ 187 (533)
T TIGR01236 108 YREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAG 187 (533)
T ss_pred cHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHH
Confidence 99999999999999999999886 999999999999988877665332222356688999999 9999999999999999
Q ss_pred HHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHH
Q 009618 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287 (530)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 287 (530)
.+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++
T Consensus 188 ~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~ 266 (533)
T TIGR01236 188 NLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWK 266 (533)
T ss_pred HHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 89999999999999999999999999999999999999977789999999999999999999999999999
Q ss_pred HHhcccce------EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccc
Q 009618 288 GAAGTVKK------VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 361 (530)
Q Consensus 288 ~~a~~~~~------~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 361 (530)
.++++++| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 267 ~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (533)
T TIGR01236 267 WVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK 346 (533)
T ss_pred HHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence 99998874 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCC--CeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEE
Q 009618 362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 439 (530)
Q Consensus 362 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~G--a~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~ 439 (530)
+|+|.|+++++||++++.+++++.+++++++++| +++++||......|+|++|||+.+++++|++++||+||||++|+
T Consensus 347 ~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~v~ 426 (533)
T TIGR01236 347 VGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLTVY 426 (533)
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEEEE
Confidence 9999999999999999999999999999999987 79999997643347999999999999999999999999999999
Q ss_pred EeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHH
Q 009618 440 CFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKY 511 (530)
Q Consensus 440 ~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~ 511 (530)
+|+| +||||+++ |+++|||+++|||+|.+++.+++++++ +|+||||...... +.+||||+|.||+| +++|.+
T Consensus 427 ~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~ 506 (533)
T TIGR01236 427 VYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTNDKAGGPL 506 (533)
T ss_pred EeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCcccCCHH
Confidence 9998 49999999 889999999999999999999999977 9999999866533 57899999999998 999999
Q ss_pred HHHhhheeeEEEEec
Q 009618 512 GMDEFLEIKYVCLGD 526 (530)
Q Consensus 512 ~l~~~~~~k~v~~~~ 526 (530)
||++|++.|+|+...
T Consensus 507 ~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 507 NLLRWTSARSIKETF 521 (533)
T ss_pred HHHHhcceEEEEEEc
Confidence 999999999997753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-100 Score=810.59 Aligned_cols=456 Identities=35% Similarity=0.540 Sum_probs=432.0
Q ss_pred CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009618 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148 (530)
Q Consensus 69 ~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 148 (530)
.++++++||+||+++++++.++.+|+++++++|++||+.|++++..+|+++|++++++|++|+++|++++++|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (530)
Q Consensus 149 a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (530)
++.|+..+++.++||+..+.+..+... ....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEP-TLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999999998876654321 1223556789999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 308 (530)
Q Consensus 229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV 308 (530)
+|+++..+++++.++|+|+|++|+|++++.+ +..|+.||+|+.|+||||+++|+.|++.++.++||+++|+|||||+||
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~iV 243 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceEE
Confidence 9999999999999999999999999986544 456889999999999999999999999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388 (530)
Q Consensus 309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 388 (530)
++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|.++++++||+++..+++++.+++
T Consensus 244 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i 323 (462)
T PRK13968 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQV 323 (462)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
++++.+|+++++||......|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 324 ~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~ 403 (462)
T PRK13968 324 EATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDET 403 (462)
T ss_pred HHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHH
Confidence 99999999999999764333689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++.++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|++..
T Consensus 404 ~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~ 461 (462)
T PRK13968 404 QARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDR 461 (462)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEec
Confidence 9999999999999999988777778999999999999999999999999999998764
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-100 Score=815.85 Aligned_cols=470 Identities=43% Similarity=0.714 Sum_probs=445.0
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++|++. |+.++.++|.++|+++++.|++++++
T Consensus 8 ~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 87 (484)
T cd07144 8 TGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDL 87 (484)
T ss_pred cCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999998656788999999999999999999999999999999999996 88999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+..++|+|||++|+|||||+..++++++
T Consensus 88 l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 166 (484)
T cd07144 88 LAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTS-PNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLA 166 (484)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEecceEEEEECcCCCHHHHHHHHHH
Confidence 9999999999998765 67999999999999999888766544332 345568899999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++++.+.++.|+.|++|+.|+||||+.+|+.|++.++++
T Consensus 167 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a~~~ 246 (484)
T cd07144 167 PALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQN 246 (484)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999997778999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCCcc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEGVV 371 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~~~ 371 (530)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|++++++
T Consensus 247 ~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~ 326 (484)
T cd07144 247 LKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTV 326 (484)
T ss_pred CCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999985 999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai 448 (530)
+||++++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 327 ~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai 406 (484)
T cd07144 327 VGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAI 406 (484)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCHHHHH
Confidence 99999999999999999999999999999997642 247899999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|+++|||+++|||+|.+++.++++++++|+|+||+....++.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 407 ~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 483 (484)
T cd07144 407 KKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVHIN 483 (484)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999999877777899999999999999999999999999999864
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-100 Score=809.37 Aligned_cols=453 Identities=37% Similarity=0.561 Sum_probs=430.5
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCc
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~ 229 (530)
|+..+++.++||++.+++..+..... ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999999988776543211 1123467889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEe
Q 009618 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 309 (530)
Q Consensus 230 ~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~ 309 (530)
|+++..+++++.++|+|+|++|+|++ +.+.+..|+.|+++++|+||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~-g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~iV~ 241 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLV-GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFIVM 241 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcC-CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeEEC
Confidence 99999999999999999999999986 44567889999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHH
Q 009618 310 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389 (530)
Q Consensus 310 ~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 389 (530)
+|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|+++++||++++.+++++.++++
T Consensus 242 ~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~ 321 (457)
T PRK09406 242 PSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVD 321 (457)
T ss_pred CCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009618 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469 (530)
Q Consensus 390 ~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 469 (530)
+++.+|+++++||...+.+|+|++|||+.+++++|.+++||+||||++|++|+|+||+|+++|+++|||+++|||+|.++
T Consensus 322 ~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~ 401 (457)
T PRK09406 322 DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAE 401 (457)
T ss_pred HHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHH
Confidence 99999999999997753457999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 470 ~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+.++++++++|+||||+.....+.+||||+|.||+|+++|++++++|++.|+|+++
T Consensus 402 ~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 402 QERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred HHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEeC
Confidence 99999999999999999887778899999999999999999999999999999764
|
|
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-100 Score=814.35 Aligned_cols=467 Identities=46% Similarity=0.765 Sum_probs=446.4
Q ss_pred eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009618 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 137 (530)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 137 (530)
||||+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhc
Q 009618 138 ITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALAC 217 (530)
Q Consensus 138 ~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaa 217 (530)
+++|+|||..+++.|+..+++.++|++.++.+..+...+...++...+.+++|+|||++|+|||||+...++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998887766655544346677899999999999999999999999999999999
Q ss_pred CCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEE
Q 009618 218 GCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297 (530)
Q Consensus 218 GN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~ 297 (530)
||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.++.|+.|+++++|+||||+++|+.|++.+++++||++
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~ 240 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVS 240 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEE
Confidence 99999999999999999999999999999999999999777788999999999999999999999999999999999999
Q ss_pred eecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 377 (530)
Q Consensus 298 lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~ 377 (530)
+|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+++
T Consensus 241 lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~ 320 (468)
T cd07088 241 LELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVN 320 (468)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009618 378 KAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 456 (530)
Q Consensus 378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~ 456 (530)
+.+++++.+++++++.+|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|
T Consensus 321 ~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~ 400 (468)
T cd07088 321 EAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEY 400 (468)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCC
Confidence 99999999999999999999999997653 35789999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 457 GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 457 gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
||+++|||+|.++++++++++++|+||||+.....+..||||+|.||+|+++|++|+++||+.|+|++
T Consensus 401 gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 401 GLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred CceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999987766677999999999999999999999999999863
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-100 Score=819.32 Aligned_cols=470 Identities=26% Similarity=0.413 Sum_probs=438.3
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH-h
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA-H 130 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~-~ 130 (530)
...++||+|+|+.+ +.+++++||.| |+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++ +
T Consensus 31 ~~~~~~i~G~~~~~--~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (522)
T cd07123 31 VEIPLVIGGKEVRT--GNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKY 108 (522)
T ss_pred cccCeeECCEEcCC--CCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhC
Confidence 34678999999974 67899999995 99999999999999999999999999999999999999999999999996 8
Q ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAMIT 208 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~~ 208 (530)
+++|+.++++|+|||+.++.. |+..++++++||+..+.++.+...+....+...++.++|+ |||++|+|||||+....
T Consensus 109 ~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~ 188 (522)
T cd07123 109 RYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGN 188 (522)
T ss_pred HHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHH
Confidence 999999999999999999964 8899999999999988877655433222256678999998 99999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.|++|++|+||||+++|+.|++.
T Consensus 189 ~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~ 267 (522)
T cd07123 189 LAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267 (522)
T ss_pred HHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 699999999999999999999999999999999999999777789999999999999999999999999999
Q ss_pred Hhcccc------eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618 289 AAGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 362 (530)
Q Consensus 289 ~a~~~~------~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 362 (530)
++++++ ++++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 268 aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 347 (522)
T cd07123 268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKM 347 (522)
T ss_pred HHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCcc
Confidence 998877 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEe
Q 009618 363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 441 (530)
Q Consensus 363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~ 441 (530)
|+|+|+++++||+++..+++++.+++++++++ |+++++||.....+|+|++|||+.+++++|++++||+||||++|++|
T Consensus 348 G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 427 (522)
T cd07123 348 GDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVY 427 (522)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEEEEEe
Confidence 99999999999999999999999999999999 99999999754334789999999999999999999999999999999
Q ss_pred CC--HHHHHHHHHcCC-CCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHH
Q 009618 442 KT--EEEAIHMANDTN-AGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGM 513 (530)
Q Consensus 442 ~~--~~eai~~~n~~~-~gL~a~v~s~d~~~~~~~a~~l--~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l 513 (530)
+| +||+|+++|++. |||++||||+|.+++.++++++ ++|+||||+.... .+.+||||+|.||+| +++|++++
T Consensus 428 ~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg~~~g~~~l 507 (522)
T cd07123 428 PDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTNDKAGSPLNL 507 (522)
T ss_pred CCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCcccCCHHHH
Confidence 95 799999999985 9999999999999999999996 5999999987653 357899999999996 99999999
Q ss_pred HhhheeeEEEEe
Q 009618 514 DEFLEIKYVCLG 525 (530)
Q Consensus 514 ~~~~~~k~v~~~ 525 (530)
++|++.|+|+..
T Consensus 508 ~~~~~~k~~~~~ 519 (522)
T cd07123 508 LRWVSPRTIKET 519 (522)
T ss_pred HHhcceEEEEEe
Confidence 999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-100 Score=813.41 Aligned_cols=462 Identities=44% Similarity=0.723 Sum_probs=440.4
Q ss_pred eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Q 009618 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL 137 (530)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~ 137 (530)
||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999998766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 138 ITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 138 ~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
+++|+|||..++ ..|+..+++.++|+++.+++..+...+...+ ...+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~-~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIP-SFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-ceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 6799999999999999888766654433222 45688999999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceE
Q 009618 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~ 296 (530)
+||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+++|+.|++.+++++||+
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l~~~ 239 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHLKHV 239 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcE
Confidence 99999999999999999999999999999999999999876789999999999999999999999999999999999999
Q ss_pred EeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccC
Q 009618 297 SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 376 (530)
Q Consensus 297 ~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli 376 (530)
++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++||++
T Consensus 240 ~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli 319 (467)
T TIGR01804 240 TMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLI 319 (467)
T ss_pred EEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 377 NKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 377 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
++.+.+++.+++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 320 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n 399 (467)
T TIGR01804 320 SAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEVIARAN 399 (467)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHHHHHHh
Confidence 999999999999999999999999997642 2478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheee
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 520 (530)
+++|||+++|||+|.+++.++++++++|+||||++....+.+||||+|+||+|+++|.+|+++|++.|
T Consensus 400 ~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 400 DTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 99999999999999999999999999999999998777778999999999999999999999999876
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-100 Score=815.59 Aligned_cols=468 Identities=43% Similarity=0.681 Sum_probs=445.6
Q ss_pred eecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 58 ~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
||||+|+.+.++.+++++||.||+++++++.++.+|++.+++.|++||+ .|+.++..+|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 6999999765678999999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+|||..+++.|+..+++.++|+++..++..+...+.. .+...+++++|+|||++|+|||||+...++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVP-PHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999877655544332 355678999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|+++++|+||||+.+|+.|++.+++++||
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 239 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNVKK 239 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999987777899999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus 240 ~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpl 319 (482)
T cd07119 240 VALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319 (482)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+++.+++++++++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~ 399 (482)
T cd07119 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLA 399 (482)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHHHHHHH
Confidence 9999999999999999999999999997532 247899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 400 n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 400 NDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 999999999999999999999999999999999987666778999999999999999999999999999998864
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-99 Score=813.34 Aligned_cols=469 Identities=44% Similarity=0.715 Sum_probs=444.5
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhh--hcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w--~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.++||||+|+.+.++.+++++||.||+++++++.++.+|++.++++|++||+.| +.++.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 467999999976667899999999999999999999999999999999999985 499999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..++ ..|+..+++.++|+++++++..+...+.. .+...+..++|+|||++|+|||||+..+++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999999655 46999999999999998877766544432 35667899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~aa~ 242 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAK 242 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999987
Q ss_pred -ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 292 -TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 292 -~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++
T Consensus 243 ~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~ 322 (476)
T cd07091 243 SNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDT 322 (476)
T ss_pred cCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||++++.+++++.+++++++.+|+++++||......++|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 ~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 402 (476)
T cd07091 323 FQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIER 402 (476)
T ss_pred cCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHHHHHHH
Confidence 99999999999999999999999999999999765445789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+|+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 403 ~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 403 ANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999977777889999999999999999999999999999864
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-99 Score=810.87 Aligned_cols=462 Identities=39% Similarity=0.660 Sum_probs=440.1
Q ss_pred CEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 009618 61 GKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL 140 (530)
Q Consensus 61 G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~ 140 (530)
|+|+.+.++.+++++||+||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67887655778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCE
Q 009618 141 EQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCT 220 (530)
Q Consensus 141 e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~ 220 (530)
|+|||+.++..|+..+++.++|++..+.+..+...+...++...+.+++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999988877766555443346677889999999999999999999999999999999999
Q ss_pred EEeecCCCcHHHH-HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEee
Q 009618 221 VVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299 (530)
Q Consensus 221 VVlKps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~le 299 (530)
||+|||+.+|+++ ..+.+++.++|+|+|++|+|++++.+++..|+.|+.+++|.||||+.+|+.|++.+++++||+++|
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lE 240 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALE 240 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 9999999999996 789999999999999999999877788999999999999999999999999999999999999999
Q ss_pred cCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHH
Q 009618 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA 379 (530)
Q Consensus 300 lgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 379 (530)
+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.
T Consensus 241 lGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~ 320 (465)
T cd07151 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINES 320 (465)
T ss_pred CCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcE
Q 009618 380 ALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 459 (530)
Q Consensus 380 ~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~ 459 (530)
+++++.+++++++.+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+
T Consensus 321 ~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~ 397 (465)
T cd07151 321 QVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLS 397 (465)
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccce
Confidence 9999999999999999999999965 3689999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 460 a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|||+|.++++++++++++|+|+||+..... +.+||||+|.||+|+++|++||++|++.|+|++.
T Consensus 398 a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 398 GAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred EEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 99999999999999999999999999887653 6799999999999999999999999999999774
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=812.32 Aligned_cols=471 Identities=37% Similarity=0.616 Sum_probs=446.0
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHH
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMA 129 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~ 129 (530)
.++.++||+|+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+ .|+.+|..+|+++|++++++|++
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~ 96 (494)
T PRK09847 17 AIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEA 96 (494)
T ss_pred ccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHH
Confidence 4556789999999876688999999999999999999999999999999999997 59999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 130 HKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
++++|++++++|+|||+.++. .|+..+++.++||++.+++..+...+.. .+...++.++|+|||++|+|||||+..++
T Consensus 97 ~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 175 (494)
T PRK09847 97 HAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLLLTC 175 (494)
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHHHHH
Confidence 999999999999999999875 5999999999999999988777654432 34456889999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.
T Consensus 176 ~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~~ 255 (494)
T PRK09847 176 WKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKD 255 (494)
T ss_pred HHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred Hh-cccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618 289 AA-GTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366 (530)
Q Consensus 289 ~a-~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 366 (530)
++ .+++|+++|+|||||+||++|+ |+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 256 aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~ 335 (494)
T PRK09847 256 AGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPL 335 (494)
T ss_pred hhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 88 5899999999999999999997 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 446 (530)
Q Consensus 367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e 446 (530)
++++++||++++.+++++.+++++++.+| ++++||... ..+.|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 336 ~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 336 DPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 99999999999999999999999999999 999998764 2467999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 492 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWIS 492 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999999877777899999999999999999999999999999864
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-100 Score=808.66 Aligned_cols=447 Identities=65% Similarity=1.066 Sum_probs=428.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++|++...++..+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999988887766554434456677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
..+++++.++|+|+|++|+++++ +.+.++.|+.|+++++|+||||+.+|+.|++.++.++||+++|+|||||+||++||
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~da 240 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFDDA 240 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCCC
Confidence 99999999999999999999986 67888999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|+|.|++.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.+++++++
T Consensus 241 dl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~ 320 (448)
T TIGR01780 241 DIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAV 320 (448)
T ss_pred CHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618 393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~ 472 (530)
++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 321 ~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~ 400 (448)
T TIGR01780 321 EKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWR 400 (448)
T ss_pred HCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHH
Confidence 99999999997643357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheee
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k 520 (530)
+++++++|+||||++...++.+||||+|.||+|+++|.+|+++|++.|
T Consensus 401 ~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 401 VAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 999999999999998777778999999999999999999999999976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-99 Score=815.28 Aligned_cols=469 Identities=35% Similarity=0.564 Sum_probs=444.2
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
...+.||||+|+.+ +.+++++||+| |+++++++.++.+|++.+++.|++||+.|+.++..+|.++|++++++|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (512)
T cd07124 31 REYPLVIGGKEVRT--EEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERARLLLRAAALLRRRR 108 (512)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 34578999999974 67899999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
++|++++++|+|||..+++.|+..+++.++||++.+++..+...+.. .+...+++++|+|||++|+|||||+.+.++++
T Consensus 109 ~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 187 (512)
T cd07124 109 FELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEMV-PGEDNRYVYRPLGVGAVISPWNFPLAILAGMT 187 (512)
T ss_pred HHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEEecceEEEEECCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999988755544322 35678899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.+++
T Consensus 188 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 267 (512)
T cd07124 188 TAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAK 267 (512)
T ss_pred HHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999777889999999999999999999999999999886
Q ss_pred ------ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 292 ------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 292 ------~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 268 ~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 347 (512)
T cd07124 268 VQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDP 347 (512)
T ss_pred ccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC--CCceEeceEecCCCCCCcccccccccceEEEEEeCC
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~ 443 (530)
.|+++++||++++.+++++.+++++++. |+++++||..... +|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~ 426 (512)
T cd07124 348 EDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKD 426 (512)
T ss_pred CCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCC
Confidence 9999999999999999999999999988 9999999976532 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHHHhhheee
Q 009618 444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIK 520 (530)
Q Consensus 444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k 520 (530)
+||+|+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|+||+| +++|.+|+++||+.|
T Consensus 427 ~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~~~~~t~~k 506 (512)
T cd07124 427 FDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGRQPFGGFKMSGTGSKAGGPDYLLQFMQPK 506 (512)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCcHHHHHHhccEE
Confidence 99999999999999999999999999999999999999999987653 356899999999999 889999999999999
Q ss_pred EEEEe
Q 009618 521 YVCLG 525 (530)
Q Consensus 521 ~v~~~ 525 (530)
+|+++
T Consensus 507 ~v~~~ 511 (512)
T cd07124 507 TVTEN 511 (512)
T ss_pred EEEEe
Confidence 99875
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-99 Score=809.78 Aligned_cols=469 Identities=43% Similarity=0.735 Sum_probs=445.4
Q ss_pred ceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
+||||+|+.+.++++++++||.| ++++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999765678999999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+|||+.+++.|+..+++.++|++...+.+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877665544333345678999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+++++||
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~ 240 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPNKR 240 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCc
Confidence 99999999999999999999999999999999999999987777899999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+
T Consensus 241 ~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl 320 (478)
T cd07131 241 VALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPL 320 (478)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+++.+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 321 i~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~ 400 (478)
T cd07131 321 INEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIA 400 (478)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997532 247899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.++++++++++++|+||||+.... .+.+||||+|+||+| +++|.+|+++|++.|+|+++
T Consensus 401 n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~~ 476 (478)
T cd07131 401 NDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYVD 476 (478)
T ss_pred hCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEEe
Confidence 999999999999999999999999999999999987764 468999999999999 88999999999999999875
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-99 Score=812.76 Aligned_cols=470 Identities=31% Similarity=0.517 Sum_probs=442.1
Q ss_pred ccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
...++||+|+|+.+ +.+++++||. ||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|++++++|++++
T Consensus 31 ~~~~~~i~g~~~~~--~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 108 (511)
T TIGR01237 31 KTYPLYINGEYVET--ENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRR 108 (511)
T ss_pred cccceeECCEEecC--CCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCH
Confidence 34567999999974 5679999999 49999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
++|++++++|+|||+.++..|+..+++.++||++.+++..+...+....+...+++++|+|||++|+|||||+..+++++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i 188 (511)
T TIGR01237 109 HELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMT 188 (511)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999888766543333345677899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a- 290 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|.||||+.+|+.|++.++
T Consensus 189 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~ 268 (511)
T TIGR01237 189 VAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAK 268 (511)
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999977789999999999999999999999999999887
Q ss_pred -----cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 291 -----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 291 -----~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|
T Consensus 269 ~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~~ 348 (511)
T TIGR01237 269 VQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLNVGPT 348 (511)
T ss_pred ccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCCCCCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
.++++++||++++.+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 349 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~~d 427 (511)
T TIGR01237 349 DDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAADFD 427 (511)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCCHH
Confidence 999999999999999999999999999888 8999886543347899999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCC-CChHHHHHhhheeeEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV 522 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v 522 (530)
|||+++|+++|||+++|||+|.+++.++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++|++.|+|
T Consensus 428 eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~~~k~v 507 (511)
T TIGR01237 428 EALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDSKAGGPDYLLQFMQPKTV 507 (511)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCcCCCHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999987653 2468999999999996 7999999999999999
Q ss_pred EEe
Q 009618 523 CLG 525 (530)
Q Consensus 523 ~~~ 525 (530)
+.+
T Consensus 508 ~~~ 510 (511)
T TIGR01237 508 TEN 510 (511)
T ss_pred EEe
Confidence 764
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-99 Score=805.26 Aligned_cols=468 Identities=32% Similarity=0.493 Sum_probs=442.6
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
++||+|+|+.+.++++++++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46999999987667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+|||+.+++.|+..+++.++|++.....+.+...+...++...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877666544333355677899999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+.+++.++|+|+|++|+|++ +.+.++.|+.||+|+.|+||||+.+|+.|.+.++.++||
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g-~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~~~~ 240 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKR 240 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC-CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhcCCe
Confidence 9999999999999999999999999999999999999998 456788999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++ |+|+++|+++++++++|+|.++++++||+
T Consensus 241 v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~ 319 (477)
T TIGR01722 241 VQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPL 319 (477)
T ss_pred EEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+++.+++++.+++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++
T Consensus 320 i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~ 399 (477)
T TIGR01722 320 ITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALI 399 (477)
T ss_pred cCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999999997631 247899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.++++++++++++|+||||++.... +.+||||+|.||+| +++|.+++++||+.|+|+++
T Consensus 400 n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~~~ 476 (477)
T TIGR01722 400 NASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVTTR 476 (477)
T ss_pred hCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEEEe
Confidence 9999999999999999999999999999999999865543 67899999999999 57899999999999999875
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-99 Score=805.03 Aligned_cols=461 Identities=40% Similarity=0.657 Sum_probs=437.9
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
+||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.+|..+|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 48999999876678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 137 LITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
++++|+|||..++. .|+..+++.++|+++..+.+.+... ....+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999986 4999999999999988876644321 23457789999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++.+++|
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~ 235 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADTVKR 235 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCe
Confidence 99999999999999999999999999999999999999987778899999999999999999999999999999999999
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|+|||||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+
T Consensus 236 v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpl 315 (466)
T cd07138 236 VALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPL 315 (466)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
+++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 316 i~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n 395 (466)
T cd07138 316 ASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIAN 395 (466)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHHHHHHh
Confidence 9999999999999999999999999996432 2478999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
+++|||+++|||+|.+++.++++++++|+||||+.. ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 396 ~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 396 DTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999999999999999864 5678999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-98 Score=804.38 Aligned_cols=466 Identities=39% Similarity=0.655 Sum_probs=439.1
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
+||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999998655688999999999999999999999999999999999985 999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
++++++|+|||..++. .|+..+++.++||++.+++..+........+...+..++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 9999999999998775 499999999999999887765432211112456788999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~~~~ 239 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGERL 239 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999998 5678899999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|+++++++|
T Consensus 240 ~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 319 (471)
T cd07139 240 ARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIG 319 (471)
T ss_pred CEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
|++++.+++++.+++++++.+|+++++||.... .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 320 pli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 399 (471)
T cd07139 320 PLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIA 399 (471)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHHHHHHH
Confidence 999999999999999999999999999997643 247899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
|+++|||+++|||+|.+++.++++++++|+|+||+.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 400 n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~~ 471 (471)
T cd07139 400 NDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIYL 471 (471)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999999999999876 56789999999999999999999999999999863
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-98 Score=802.92 Aligned_cols=465 Identities=31% Similarity=0.483 Sum_probs=433.9
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
+||||+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++
T Consensus 3 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 3 LWINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred ceECCEEecC-CCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6899999875 367899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
++++|+|||+.+++.|+..+++.++|++....+..+...+. .++...+++++|+|||++|+|||||+..+++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSE-MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988876665544322 23556788999999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cce
Q 009618 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 295 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~ 295 (530)
+||+||+|||+.+|+++..+++++.++|+|+|++|+|++ +.+.+..|+.|++|+.|+||||+++|+.|++.++++ .++
T Consensus 161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~~~ 239 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKI 239 (487)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcCCCc
Confidence 999999999999999999999999999999999999998 567899999999999999999999999999987755 578
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhccccCCCC-CCCcccC
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGF-GEGVVQG 373 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~-~~~~~~G 373 (530)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|+++++++++|+|+ ++++++|
T Consensus 240 ~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~G 319 (487)
T PRK09457 240 LALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMG 319 (487)
T ss_pred EEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccC
Confidence 899999999999999999999999999999999999999999999999998 99999999999999999997 7889999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~ 453 (530)
|+++..+++++.+++++++++|+++++||...+.+++|++|||+ +++++|++++||+||||++|++|+|+||||+++|+
T Consensus 320 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~ 398 (487)
T PRK09457 320 AVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANN 398 (487)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999988654345789999999 69999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 454 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|||+++|||+|.++++++++++++|+||||+..... +.+||||+|.||+|+++|. ...+|++.|++++..
T Consensus 399 ~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~-~~~~~~~~k~~~~~~ 471 (487)
T PRK09457 399 TRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAY-YAADYCAYPMASLES 471 (487)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCch-hHhhheeeeEEEEec
Confidence 99999999999999999999999999999999876543 5789999999999999995 556699999998773
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-98 Score=806.67 Aligned_cols=469 Identities=31% Similarity=0.514 Sum_probs=439.9
Q ss_pred CccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
....+.||+|+|+.+ +++++++||+ ||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|+++
T Consensus 34 ~~~~~~~i~g~~~~~--~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~ 111 (514)
T PRK03137 34 GQDYPLIIGGERITT--EDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRR 111 (514)
T ss_pred ccccceeECCEEecC--CCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHC
Confidence 345568999999974 6789999999 6999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
+++|++++++|+|||..+++.|+..+++.++||+..+.+..+........+...+++++|+|||++|+|||||+..++++
T Consensus 112 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 112 KHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999987764222111224667889999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++|++|+||||+.+|+.|++.++
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa 271 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAA 271 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999988
Q ss_pred c------ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCC
Q 009618 291 G------TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 364 (530)
Q Consensus 291 ~------~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 364 (530)
+ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 272 ~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~g~ 351 (514)
T PRK03137 272 KVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGN 351 (514)
T ss_pred cccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCCCC
Confidence 6 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618 365 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444 (530)
Q Consensus 365 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~ 444 (530)
|.+++ ++||++++.+++++.+++++++.+ +++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 352 p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 429 (514)
T PRK03137 352 PEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDF 429 (514)
T ss_pred CCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEecCCH
Confidence 99998 999999999999999999999887 6999999764335799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHHHhhheeeE
Q 009618 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKY 521 (530)
Q Consensus 445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~ 521 (530)
||||+++|+++|||++||||+|.++++++++++++|+||||+.... .+.+||||+|.||+| +++|.++|++|++.|+
T Consensus 430 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~ 509 (514)
T PRK03137 430 DHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDSKAGGPDYLLLFLQAKT 509 (514)
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccCCHHHHHHhceEEE
Confidence 9999999999999999999999999999999999999999987553 346899999999999 6899999999999999
Q ss_pred EEE
Q 009618 522 VCL 524 (530)
Q Consensus 522 v~~ 524 (530)
|+.
T Consensus 510 v~~ 512 (514)
T PRK03137 510 VSE 512 (514)
T ss_pred EEE
Confidence 865
|
|
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-98 Score=798.29 Aligned_cols=460 Identities=38% Similarity=0.595 Sum_probs=432.0
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
..||||+|+. ++++++++||.||+++++++.++.+|++.|+++|++|+ +.++..+|.++|++++++|++++++|+
T Consensus 5 ~~~i~g~~~~--~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela 79 (472)
T TIGR03250 5 ALRIAGEKVS--RDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEIS 79 (472)
T ss_pred CceECCEEec--CCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 4689999986 36889999999999999999999999999999998875 578999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCC----CCCCceeEEEEeec-eEEEEECCCCcchHHHHHH
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA----TLPDRRLFVLKQPV-GVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~----~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~~~~~ 210 (530)
+++++|+|||+.+++.|+..+++.++||+..+.+..+...+. ...+...+..++|+ |||++|+|||||+.+++++
T Consensus 80 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~ 159 (472)
T TIGR03250 80 DLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHK 159 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHH
Confidence 999999999999999999999999999999887766544321 11234568899998 9999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++++.|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a~ 239 (472)
T TIGR03250 160 IAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239 (472)
T ss_pred HHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999877788999999999999999999999999998875
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++
T Consensus 240 --~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 317 (472)
T TIGR03250 240 --YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSV 317 (472)
T ss_pred --CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||++++.+++++++++++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 318 ~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~---g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (472)
T TIGR03250 318 DMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRD---GALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRI 394 (472)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC---CEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999998653 789999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||++||||+|.+++.++++++++|+||||...... +.+||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus 395 aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 395 SNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred HhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999876533 46899999999999 56889999999999999875
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-98 Score=801.91 Aligned_cols=461 Identities=27% Similarity=0.375 Sum_probs=421.3
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
++||||+|+.+ ++++++++||.||+++++++.++ +|+++|+++|++| |+.|+.+++.+|+++|++++++|++++++|
T Consensus 2 ~~~I~g~~~~~-~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~l 79 (513)
T cd07128 2 QSYVAGQWHAG-TGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDL 79 (513)
T ss_pred ceeECCEEEcC-CCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999986 36889999999999999999875 8999999999997 799999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC--------cccCCCCCC-ceeEEEEee-ceEEEEECCCCcch
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG--------EIIPATLPD-RRLFVLKQP-VGVAGAITPWNFPL 204 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g--------~~~~~~~~g-~~~~~~~~P-~GVv~~i~p~n~P~ 204 (530)
+++ +.|+|||+.+++.|+..+++.++||++.+++..+ ...+...++ ...++.++| +|||++|+|||||+
T Consensus 80 a~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 80 YAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred HHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHH
Confidence 996 8999999999999999999999999999877642 222221112 135678999 59999999999999
Q ss_pred HHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (530)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (530)
.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.| +.+++|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~~G~ 235 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAATAA 235 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 99999999998654444443 5789999999999999
Q ss_pred HHHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618 284 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356 (530)
Q Consensus 284 ~i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 356 (530)
.|++.+ +++++|+++|||||||+||++||| +|.+++.+++++|.|+||.|++++|+|||+++||+|+++|+++
T Consensus 236 ~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (513)
T cd07128 236 KLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALKAR 315 (513)
T ss_pred HHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHHHH
Confidence 999985 478999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceEeceEecCCCCC--Cccc
Q 009618 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKSE--MLVS 427 (530)
Q Consensus 357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-------~~~~~~~~Ptvl~~~~~~--~~~~ 427 (530)
++++++|+|+++++++||++++.+++++.+++++++.+ |++++||... ..+|+|++|||+.+++++ |.++
T Consensus 316 ~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~ 394 (513)
T cd07128 316 LAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAATAVH 394 (513)
T ss_pred HHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCcccchHH
Confidence 99999999999999999999999999999999999988 9999999652 124789999999988874 8999
Q ss_pred ccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC---------CCCCCcc
Q 009618 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI---------STEVAPF 496 (530)
Q Consensus 428 ~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~---------~~~~~pf 496 (530)
+||+||||++|++|+|+||+|+++|+++|||++||||+|.+++.+++++|+ +|+||||.... ..+.+||
T Consensus 395 ~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~~pf 474 (513)
T cd07128 395 DVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQLVH 474 (513)
T ss_pred hCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999997 99999998642 2357899
Q ss_pred cCCCCCCCCCC-ChHHHHHhhheeeEEE
Q 009618 497 GGVKQSGLGRE-GSKYGMDEFLEIKYVC 523 (530)
Q Consensus 497 GG~~~SG~G~~-~g~~~l~~~~~~k~v~ 523 (530)
||+|.||+|++ +|.+|+++|++.|+|+
T Consensus 475 GG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 475 GGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCcccCCCCcccccHHHHHHhheeeeee
Confidence 99999999999 5799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-98 Score=800.56 Aligned_cols=466 Identities=31% Similarity=0.510 Sum_probs=436.7
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
...++||+|+|+.+.++++++++||.||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|+++++
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ 93 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKA 93 (496)
T ss_pred cccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999976567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc--ccCC-----CCCCceeEEEEeeceEEEEECCCCcchH
Q 009618 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--IIPA-----TLPDRRLFVLKQPVGVAGAITPWNFPLA 205 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~--~~~~-----~~~g~~~~~~~~P~GVv~~i~p~n~P~~ 205 (530)
+|++++++|+|||..+++.|+..+++.++|++..+.+..+. ..+. ...+...+.+++|+|||++|+|||||+.
T Consensus 94 el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~ 173 (496)
T PLN00412 94 PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173 (496)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHH
Confidence 99999999999999999999999999999999887765432 2211 1112345788999999999999999999
Q ss_pred HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHH
Q 009618 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (530)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (530)
.+++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|++++++.+.+..|+.|++|+.|.|||| .+|+.|
T Consensus 174 ~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~~v 252 (496)
T PLN00412 174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAI 252 (496)
T ss_pred HHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHHHH
Confidence 9999999999999999999999999999999999999999999999999877788999999999999999999 999999
Q ss_pred HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++.++ .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++|+|
T Consensus 253 ~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p 330 (496)
T PLN00412 253 SKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPP 330 (496)
T ss_pred HHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHHHHHHhCccCCC
Confidence 98875 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
.+ ++++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 331 ~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~d 406 (496)
T PLN00412 331 ED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVE 406 (496)
T ss_pred cc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHH
Confidence 87 789999999999999999999999999999998754 36999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
|||+++|+++|||++||||+|.+++.++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 407 eai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~i~~ 486 (496)
T PLN00412 407 EGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVI 486 (496)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999764 34579999999999999999999999999999987
Q ss_pred e
Q 009618 525 G 525 (530)
Q Consensus 525 ~ 525 (530)
+
T Consensus 487 ~ 487 (496)
T PLN00412 487 N 487 (496)
T ss_pred e
Confidence 5
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-98 Score=802.63 Aligned_cols=471 Identities=31% Similarity=0.505 Sum_probs=443.0
Q ss_pred CCccccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129 (530)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~ 129 (530)
.+...+.||+|+|+.+ +.+++++||. ||+++++++.++.+|++.++++|++||+.|+.+|.++|.++|++++++|++
T Consensus 15 ~~~~~~~~i~g~~~~~--~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~ 92 (500)
T cd07083 15 FGRAYPLVIGGEWVDT--KERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRR 92 (500)
T ss_pred ccccccceECCEEecC--CCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 3455678999999974 6789999997 699999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
++++|++++++|+|||+.++..|+..+++.++||++.+.+..+.... ....+...+++++|+|||++|+|||||+.+.+
T Consensus 93 ~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~ 172 (500)
T cd07083 93 RRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFT 172 (500)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHH
Confidence 99999999999999999999999999999999999999887664321 11245667889999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+.++.|+.|++|++|+||||+.+|+.|++.
T Consensus 173 ~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 173 GMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999999
Q ss_pred Hhccc------ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618 289 AAGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 362 (530)
Q Consensus 289 ~a~~~------~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 362 (530)
+++++ +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAERLSV 332 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCC
Confidence 98876 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC
Q 009618 363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 442 (530)
Q Consensus 363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~ 442 (530)
|+|.++++++||++++.+++++++++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~ 411 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYK 411 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeC
Confidence 999999999999999999999999999998887 9999997653347899999999999999999999999999999999
Q ss_pred --CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhh
Q 009618 443 --TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFL 517 (530)
Q Consensus 443 --~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~ 517 (530)
|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.||+| +++|++++++|+
T Consensus 412 d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~~~ 491 (500)
T cd07083 412 DDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFL 491 (500)
T ss_pred CCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHHHhh
Confidence 9999999999999999999999999999999999999999999876543 46899999999999 689999999999
Q ss_pred eeeEEEE
Q 009618 518 EIKYVCL 524 (530)
Q Consensus 518 ~~k~v~~ 524 (530)
+.|+|+.
T Consensus 492 ~~k~~~~ 498 (500)
T cd07083 492 EMKAVAE 498 (500)
T ss_pred heeEEEE
Confidence 9999875
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-98 Score=796.94 Aligned_cols=456 Identities=40% Similarity=0.661 Sum_probs=433.5
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||+|+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 21 ~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (480)
T cd07111 21 SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRL 100 (480)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999865578899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||+.+++ .|+..+++.+++++...+...+ .+..++|+|||++|+|||||+.+.+++++
T Consensus 101 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~P~~~~~~~i~ 169 (480)
T cd07111 101 FAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNFPLLMLAWKIC 169 (480)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCccHHHHHHHHHH
Confidence 99999999999999998 4999999999999877765422 13457999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..++++++++|+|+|++|+|++++ +.+..|+.|++|+.|+||||+.+|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~~ 248 (480)
T cd07111 170 PALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEVGRALRRATAGT 248 (480)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999854 6789999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++
T Consensus 249 ~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~ 328 (480)
T cd07111 249 GKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDM 328 (480)
T ss_pred CCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||++++.+++++.+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 329 gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n 408 (480)
T cd07111 329 GAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALAN 408 (480)
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHh
Confidence 99999999999999999999999999999865333579999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeE
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 521 (530)
+++|||+++|||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+
T Consensus 409 ~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~ 477 (480)
T cd07111 409 NTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEYLRPSW 477 (480)
T ss_pred CCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHHhhccC
Confidence 999999999999999999999999999999999987777789999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-98 Score=792.69 Aligned_cols=449 Identities=39% Similarity=0.604 Sum_probs=428.4
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++||.||+++++++.++.+|++.|++.|++||+. |+. ++.+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 231 (530)
|+..+++.++||++.++...+...+. .++...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999999988876654432 23567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618 232 TALAAAELALQ-AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310 (530)
Q Consensus 232 ~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~ 310 (530)
++..+++++++ +|+|+|++|++++++.++++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||++
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~IV~~ 238 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCIVFD 238 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeEECC
Confidence 99999999999 79999999999987778899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390 (530)
Q Consensus 311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 390 (530)
|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus 239 daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~ 318 (455)
T cd07120 239 DADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVER 318 (455)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 391 AVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 391 a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 319 a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~ 398 (455)
T cd07120 319 AIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDL 398 (455)
T ss_pred HHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 9999999999876532 2478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++||+.|+|++
T Consensus 399 ~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 399 ARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 999999999999999999988777789999999999999999999999999999864
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-97 Score=793.77 Aligned_cols=450 Identities=45% Similarity=0.710 Sum_probs=429.2
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhC---cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618 154 DYGAKFIEFYAEEAKRVYG---EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g---~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 230 (530)
..+++.++||++.++++.+ ...+...++...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999998877642 2222222356678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310 (530)
Q Consensus 231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~ 310 (530)
+++..+++++.++|+|+|++|+|++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~~ 240 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVFD 240 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEECC
Confidence 99999999999999999999999997777899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390 (530)
Q Consensus 311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 390 (530)
|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++++++++
T Consensus 241 dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~ 320 (456)
T cd07110 241 DADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIAR 320 (456)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 391 AVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 391 a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
++.+|+++++||.... ..++|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 321 a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~ 400 (456)
T cd07110 321 GKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAE 400 (456)
T ss_pred HHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 9999999999997643 34789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 401 ~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 401 RCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 9999999999999999997767778999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=792.66 Aligned_cols=450 Identities=36% Similarity=0.608 Sum_probs=429.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.+++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++|++.....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999988877766554433 255678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
..+++++.++ +|+|++|++++++.+.++.|+.|+++++|+||||+++|+.|++.++++++|+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dad 238 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFPDAD 238 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCC
Confidence 9999999995 999999999987777889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-hhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAK-FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 314 ~~~a~~~i~~s~-f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
+|.|++.+++++ |.++||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++
T Consensus 239 l~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~ 318 (456)
T cd07107 239 PEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAK 318 (456)
T ss_pred HHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHH
Confidence 999999999995 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 393 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 319 ~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~ 398 (456)
T cd07107 319 REGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDIS 398 (456)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHH
Confidence 99999999997532 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 399 QAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred HHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999887777899999999999999999999999999999874
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-97 Score=791.37 Aligned_cols=450 Identities=42% Similarity=0.685 Sum_probs=429.9
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (530)
+||+||+++++++.++.+|++.+++.|++||+. |+.+|.++|.++|++++++|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 689999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
+..+++.++|++...+++.+...+...++...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999998777765544332234566889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+++++.++|+|+|++|++++++.++++.|+.|++|+.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~~dA 241 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFADA 241 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEECCCC
Confidence 99999999999999999999998777789999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|+++++++||++++.+.+++.+++++++
T Consensus 242 dl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 321 (454)
T cd07118 242 DLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGR 321 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 393 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 322 ~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~ 401 (454)
T cd07118 322 AEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTAL 401 (454)
T ss_pred hCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHH
Confidence 99999999998753 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++|+|+||+....++.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus 402 ~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~ 454 (454)
T cd07118 402 TVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL 454 (454)
T ss_pred HHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 99999999999999988878889999999999999999999999999999863
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=792.23 Aligned_cols=451 Identities=47% Similarity=0.743 Sum_probs=428.5
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++++||.||+++++++.++.+|++.+++.|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
|+..+++.++|+++.+..+.+...+... .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999888766655433221 134567889999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|+++..+++++.++|+|+|++|++++++.+.++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~i 240 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPMI 240 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCeeE
Confidence 99999999999999999999999999997778899999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++++++
T Consensus 241 V~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 320 (456)
T cd07145 241 VLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENL 320 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+++++.+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 321 i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~ 398 (456)
T cd07145 321 VNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDI 398 (456)
T ss_pred HHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999999999764 278999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++.++++++++|+||||+..... +.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 399 ~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 399 NRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 999999999999999999876543 579999999999999999999999999999864
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-98 Score=799.20 Aligned_cols=458 Identities=47% Similarity=0.776 Sum_probs=434.4
Q ss_pred eeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Q 009618 63 WIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ 142 (530)
Q Consensus 63 ~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 142 (530)
|+.+.+ ++++++||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 1 w~~~~~-~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~ 79 (462)
T PF00171_consen 1 WVSSES-ETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALET 79 (462)
T ss_dssp EEE-TS-SEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcCCCC-CEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccc
Confidence 787754 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEE
Q 009618 143 GKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222 (530)
Q Consensus 143 Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 222 (530)
|||+.+++.|+..+++.++||++.++++.+...+. ..+...+..++|+|||++|+|||||+.++++++++||++||+||
T Consensus 80 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 80 GKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp TSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred ccccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99999999999999999999999999977766555 36888999999999999999999999999999999999999999
Q ss_pred eecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCC
Q 009618 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGG 302 (530)
Q Consensus 223 lKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG 302 (530)
+|||+.+|.++..++++++++|+|+|++|++++++.+.+..|+.||+++.|.||||+++|+.|++.++++++|+++|+||
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lelgG 238 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLELGG 238 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEECE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccccccccccc
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred CccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHH
Q 009618 303 NAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALE 382 (530)
Q Consensus 303 ~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~ 382 (530)
|||+||++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+.+
T Consensus 239 ~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~ 318 (462)
T PF00171_consen 239 KNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRE 318 (462)
T ss_dssp EEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHH
T ss_pred cceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhccccccccCCccccccccccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCeEeeCCc---ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcE
Q 009618 383 KVETFVEDAVSKGAKVLLGGR---RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLA 459 (530)
Q Consensus 383 ~~~~~i~~a~~~Ga~vl~gg~---~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~ 459 (530)
++++++++++.+||++++||. .....|+|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+
T Consensus 319 ~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 398 (462)
T PF00171_consen 319 RVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLT 398 (462)
T ss_dssp HHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESE
T ss_pred hcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccCCCce
Confidence 999999999999999999993 22245799999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCHHHHHHHHhhccceEEEECCCCCCCCC-CcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 460 AYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 460 a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~-~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
++|||+|.++++++++++++|+||||++...++. +||||+|.||+|+++|.+||++|++.|+|
T Consensus 399 a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 399 ASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred eEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 9999999999999999999999999999876655 59999999999999999999999999987
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-97 Score=791.99 Aligned_cols=465 Identities=32% Similarity=0.500 Sum_probs=432.8
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
.||+|+|+.+ ++++++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++
T Consensus 1 ~~i~g~~~~~-~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 79 (484)
T TIGR03240 1 LFIDGKWRAG-QGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALAR 79 (484)
T ss_pred CeECCEEecC-CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 4899999875 468899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
++++|+|||..+++.|+..+++.++|++.......+...+. .++...++.++|+|||++|+|||||+...++++++||+
T Consensus 80 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALa 158 (484)
T TIGR03240 80 VIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 158 (484)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888877665544322 23445688899999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cce
Q 009618 217 CGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKK 295 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~ 295 (530)
+||+||+|||+.+|+++..++++++++|+|+|++|+|++ +.+.++.|+.||+|++|+||||+++|+.|++.++++ .++
T Consensus 159 aGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~~~ 237 (484)
T TIGR03240 159 AGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKI 237 (484)
T ss_pred cCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCCCc
Confidence 999999999999999999999999999999999999998 567899999999999999999999999999987765 688
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhccccCCC-CCCCcccC
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDG-FGEGVVQG 373 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p-~~~~~~~G 373 (530)
+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|.++++++++|+| .++++++|
T Consensus 238 ~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~g 317 (484)
T TIGR03240 238 LALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMG 317 (484)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCccc
Confidence 999999999999999999999999999999999999999999999999985 9999999999999999997 57889999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~ 453 (530)
|++++.+++++.+++++++++|+++++||...+.+++|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+
T Consensus 318 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~ 396 (484)
T TIGR03240 318 AVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANN 396 (484)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999988654345689999999 58899999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 454 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|||+++|||+|.++++++++++++|+||||..... .+.+||||+|.||+|+++|.++++ |++.|+++++.
T Consensus 397 ~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~~ 469 (484)
T TIGR03240 397 TRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLEA 469 (484)
T ss_pred CCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEec
Confidence 9999999999999999999999999999999987653 457899999999999999976655 99999998873
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-97 Score=790.46 Aligned_cols=450 Identities=43% Similarity=0.715 Sum_probs=431.5
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 231 (530)
|+..+++.+++++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999999988876665554435667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311 (530)
Q Consensus 232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d 311 (530)
++..+++++.++|+|+|++|++++++.+.++.|+.|++|++|.||||+.+|+.|++.+++++||+++|+|||||+||++|
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~~d 240 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVLAD 240 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECCC
Confidence 99999999999999999999999877788999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 241 adl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a 320 (451)
T cd07150 241 ADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320 (451)
T ss_pred CChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
+.+|+++++||... |+|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++
T Consensus 321 ~~~Ga~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~ 397 (451)
T cd07150 321 VAKGAKLLTGGKYD---GNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAF 397 (451)
T ss_pred HhCCCEEEeCCccC---CcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHH
Confidence 99999999998653 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 472 RVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++|+|+||++.... +.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 398 ~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 398 KLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred HHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 99999999999999987644 578999999999999999999999999999864
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-97 Score=788.53 Aligned_cols=448 Identities=35% Similarity=0.519 Sum_probs=423.7
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh-hhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~-w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
+++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 2 ~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 81 (455)
T cd07148 2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAKV 81 (455)
T ss_pred CccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 47899999999999999999999999999999998 56799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
|+..+++.++|++..++++.+...+.. .++...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 82 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 161 (455)
T cd07148 82 EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCC
Confidence 999999999999999888766543321 1345678899999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|+++..+++++.++|+|+|++|+++++ .+.++.|+.|++|+.|+||||+++|+.|++.++. .+|+++|+|||||+|
T Consensus 162 ~~p~~~~~l~~~~~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~i 239 (455)
T cd07148 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCE-NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVI 239 (455)
T ss_pred cccHHHHHHHHHHHHcCCCcCcEEEEeCC-hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceE
Confidence 99999999999999999999999999984 4678999999999999999999999999998876 489999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.++++++++
T Consensus 240 V~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 319 (455)
T cd07148 240 VDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEW 319 (455)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+++++.+|+++++||... +++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~ 397 (455)
T cd07148 320 VNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDL 397 (455)
T ss_pred HHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCH
Confidence 999999999999999764 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++.++++++++|+||||++.... +.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 398 ~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 398 DVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 999999999999999999876543 468999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-97 Score=797.67 Aligned_cols=467 Identities=40% Similarity=0.614 Sum_probs=438.9
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.+++|.|.|-. ++++++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|
T Consensus 19 ~~~~~~~~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~el 96 (524)
T PRK09407 19 LRRLTARVDGA--AGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREEL 96 (524)
T ss_pred HHHHHhhcCCC--CCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 35678888755 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
++++++|+|||..++..|+..++..++||+..+.+..+.... ...+ ....+..++|+|||++|+|||||+...+++++
T Consensus 97 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~ 176 (524)
T PRK09407 97 LDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAI 176 (524)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHH
Confidence 999999999999999999999999999999988876654321 1111 25678899999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.+.++.|+.| ++.|+||||+.+|+.|++.++++
T Consensus 177 ~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred HHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999777889999986 68899999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++++++
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~ 334 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADM 334 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
||++++++++++++++++++++|+++++||.... .+|+|++|||+.+++++|.+++||+||||++|++|+|+||||+++
T Consensus 335 Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~ 414 (524)
T PRK09407 335 GSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERA 414 (524)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHH
Confidence 9999999999999999999999999999997532 357899999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC---CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||++||||+|.+++.++++++++|+||||+... .++.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 415 N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 491 (524)
T PRK09407 415 NDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491 (524)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEc
Confidence 99999999999999999999999999999999998654 345689999999999999999999999999999876
|
|
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-97 Score=811.66 Aligned_cols=462 Identities=25% Similarity=0.358 Sum_probs=422.6
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
++||||+|+.+. +++++++||.||+++++++.++ +|+++|+++|++| |+.|+.++..+|+++|++++++|++++++|
T Consensus 2 ~~~i~g~~~~~~-~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 79 (663)
T TIGR02278 2 QSYLSGEWRTGQ-GEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEAL 79 (663)
T ss_pred ceeECCEEEcCC-CCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999863 6789999999999999999999 6999999999996 999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEEeec-eEEEEECCCCcch
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNFPL 204 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------g~~~~~~~~g-~~~~~~~~P~-GVv~~i~p~n~P~ 204 (530)
++ +++|+|||+.+++.|+..+++.++||+..+++.. |...+...++ ...++.++|+ |||++|+|||||+
T Consensus 80 a~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~ 158 (663)
T TIGR02278 80 YA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPV 158 (663)
T ss_pred HH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHH
Confidence 99 5999999999999999999999999999887632 3333322222 3468899997 9999999999999
Q ss_pred HHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (530)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (530)
.++++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|+..+ .+..+++++.|+||||+++|+
T Consensus 159 ~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~~---~~~~~~~~~~V~FTGS~~~G~ 235 (663)
T TIGR02278 159 WGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAGD---LLDHLDHRDVVAFTGSAATAD 235 (663)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChHH---HHhcCCCCCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 999999999985322 333346789999999999999
Q ss_pred HHHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618 284 KLMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356 (530)
Q Consensus 284 ~i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 356 (530)
.|++.+ +++++|+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++
T Consensus 236 ~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~ 315 (663)
T TIGR02278 236 RLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQAR 315 (663)
T ss_pred HHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHHHH
Confidence 999874 478999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCC-cccccccccce
Q 009618 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEM-LVSREEVFGPV 435 (530)
Q Consensus 357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~-~~~~eE~FGPv 435 (530)
++++++|+|+++++++||++++.+++++++++++++++|+++++||... .+|+|++|||+.+++++| .+++||+||||
T Consensus 316 ~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTvl~~~~~~~~~i~~eE~FGPV 394 (663)
T TIGR02278 316 LAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTLLLAEDPWAGAVHATEAFGPV 394 (663)
T ss_pred HHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEEEeeCCcchhhHHhccccCCe
Confidence 9999999999999999999999999999999999999999999999764 347999999999998886 79999999999
Q ss_pred EEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEE-CCC-------C-CCCCCCcccCCCCCCC
Q 009618 436 APLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGV-NEG-------L-ISTEVAPFGGVKQSGL 504 (530)
Q Consensus 436 ~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~v~v-N~~-------~-~~~~~~pfGG~~~SG~ 504 (530)
++|++|+|.||||+++|+++|||++||||+|.+++.+++++| ++|+||| |.. . ...+.+||||+|.||+
T Consensus 395 l~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~SG~ 474 (663)
T TIGR02278 395 ATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGRAGG 474 (663)
T ss_pred EEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCccCcC
Confidence 999999999999999999999999999999999999999999 8999999 642 1 1235789999999999
Q ss_pred CCC-ChHHHHHhhheeeEEEE
Q 009618 505 GRE-GSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 505 G~~-~g~~~l~~~~~~k~v~~ 524 (530)
|++ +|.+++++|++.|+|+.
T Consensus 475 G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 475 GEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred CCccchHHHHHHhceeEEEEc
Confidence 999 57899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-96 Score=786.99 Aligned_cols=450 Identities=44% Similarity=0.703 Sum_probs=430.0
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++||++.++.+.+...+.. .+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999998877665544332 256778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
..+.+++.++|+|+|++|+++++ .+.++.|+.|++|+.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~dAd 238 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFDDAD 238 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCC-hhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECCCCC
Confidence 99999999999999999999985 46889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
+|.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||+++..+++++.+++++++.
T Consensus 239 l~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 318 (457)
T cd07090 239 LENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQ 318 (457)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccC-----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 394 KGAKVLLGGRRHS-----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 394 ~Ga~vl~gg~~~~-----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 319 ~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~ 398 (457)
T cd07090 319 EGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQ 398 (457)
T ss_pred CCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHH
Confidence 9999999997532 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++++++|+||||+....++.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 399 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 399 RAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred HHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 999999999999999999877777899999999999999999999999999999874
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=785.69 Aligned_cols=451 Identities=41% Similarity=0.645 Sum_probs=429.0
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-G 151 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 151 (530)
++||.||+++++++.++.+|+++++++|++|++.|+ .++..+|.++|++++++|++++++|++++++|+|||+.++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCccc-CCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEII-PAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~-~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
|+..+++.++||++.+.+..+... +.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999887665542 221 1355678999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|.++..+.+++.++|+|+|++|++++++.+++..|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 99999999999999999999999999997777899999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+.++++++
T Consensus 241 V~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~ 320 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGY 320 (459)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009618 388 VEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~ 465 (530)
+++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 321 i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~ 400 (459)
T cd07089 321 IARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSA 400 (459)
T ss_pred HHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcC
Confidence 9999999999999997643 25789999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 466 d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
|.++++++++++++|+|+||+....++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 401 d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 401 DVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred CHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 99999999999999999999988777889999999999999999999999999999864
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-96 Score=785.20 Aligned_cols=449 Identities=41% Similarity=0.660 Sum_probs=427.6
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhh-cCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS-KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~-~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (530)
++||+||+++++++.++.+|++.++++|++|++.|. .++.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999876 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
+..+++.++||++..++..+...+.. ++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPLG-PGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 99999999999998877766554432 35678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+++++.++|+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~~da 239 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVFADA 239 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEECCCC
Confidence 99999999999999999999998777889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.+ ++++||++++++.+++.+++++++
T Consensus 240 Dl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~ 318 (454)
T cd07109 240 DLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARAR 318 (454)
T ss_pred CHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986 689999999999999999999999
Q ss_pred HCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009618 393 SKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 469 (530)
.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++
T Consensus 319 ~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~ 398 (454)
T cd07109 319 ARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDR 398 (454)
T ss_pred hCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHH
Confidence 99999999987542 257899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCC-CCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 470 TWRVSEALEYGLVGVNEGL-ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 470 ~~~~a~~l~~G~v~vN~~~-~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+.++++++++|+|+||+.. ..++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 399 ~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 399 ALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred HHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 9999999999999999987 456679999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-96 Score=783.25 Aligned_cols=450 Identities=44% Similarity=0.727 Sum_probs=430.5
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 153 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev 153 (530)
+||.||+++++++.++.++++++++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999997 499
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++|++.++++..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPVR-GPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 9999999999998877766544432 356678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
..+.+++.++|+|+|+++++++++.++++.|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~dAd 240 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFADAD 240 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECCCCC
Confidence 99999999999999999999997778889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++++
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~ 320 (453)
T cd07115 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGRE 320 (453)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473 (530)
Q Consensus 394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~ 473 (530)
+|+++++||......++|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++
T Consensus 321 ~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~ 400 (453)
T cd07115 321 EGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRV 400 (453)
T ss_pred CCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHH
Confidence 99999999976433478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++++++|+|+||+.....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 401 ~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 401 AAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999998777778899999999999999999999999999999774
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-96 Score=783.45 Aligned_cols=454 Identities=42% Similarity=0.695 Sum_probs=431.7
Q ss_pred CeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618 70 KTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (530)
Q Consensus 70 ~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (530)
++++++||.||+++++++.++.+|++.+++.|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..
T Consensus 2 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 81 (462)
T cd07112 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPIS 81 (462)
T ss_pred CeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 4688999999999999999999999999999999998 49999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecC
Q 009618 148 EAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226 (530)
Q Consensus 148 ~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps 226 (530)
+++. |+..+++.++|++..+++..+...+.. .+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 82 ~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps 160 (462)
T cd07112 82 DALAVDVPSAANTFRWYAEAIDKVYGEVAPTG-PDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCC
Confidence 9975 999999999999999887766543322 34567889999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-cccceEEeecCCCcc
Q 009618 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAP 305 (530)
Q Consensus 227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-~~~~~~~lelgG~~~ 305 (530)
+.+|+++..+++++.++|+|+|++|+|++++.+.+..|+.|++++.|.||||+++|+.|++.++ .++||+++|+||+||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~ 240 (462)
T cd07112 161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSP 240 (462)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCCe
Confidence 9999999999999999999999999999977788999999999999999999999999999988 489999999999999
Q ss_pred EEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHH
Q 009618 306 CIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384 (530)
Q Consensus 306 ~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 384 (530)
+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++
T Consensus 241 ~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v 320 (462)
T cd07112 241 NIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKV 320 (462)
T ss_pred EEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEE
Q 009618 385 ETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 462 (530)
Q Consensus 385 ~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v 462 (530)
.+++++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|
T Consensus 321 ~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i 400 (462)
T cd07112 321 LGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASV 400 (462)
T ss_pred HHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEE
Confidence 9999999999999999997642 24789999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 463 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 463 ~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 401 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 462 (462)
T cd07112 401 WTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462 (462)
T ss_pred EcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence 99999999999999999999999987777789999999999999999999999999999863
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-96 Score=782.00 Aligned_cols=448 Identities=39% Similarity=0.622 Sum_probs=423.0
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (530)
.||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCccc-CCCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 155 YGAKFIEFYAEEAKRVYGEII-PATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 155 ~~~~~l~~~a~~~~~~~g~~~-~~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
.+++.++|++..+.+..+... +...+ ....+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999998877654432 11111 3467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+.+++.++|+|+|++|++++++.+.+..|++| ++.|.||||+++|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dA 238 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLEDA 238 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCCC
Confidence 99999999999999999999999878889999987 4789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||++++.+++++++++++++
T Consensus 239 dl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~ 318 (454)
T cd07101 239 DLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAV 318 (454)
T ss_pred CHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 393 SKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
++|+++++||.... .+++|++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.
T Consensus 319 ~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~ 398 (454)
T cd07101 319 AKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGR 398 (454)
T ss_pred HCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 99999999986532 34689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCC---CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 472 RVSEALEYGLVGVNEGLI---STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~---~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++|+||||++.. ..+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 399 RIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 999999999999998654 34678999999999999999999999999999864
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-96 Score=789.48 Aligned_cols=467 Identities=32% Similarity=0.445 Sum_probs=437.7
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
....+||+|+|.. ++++++++||.| |+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++
T Consensus 31 ~~~~p~i~g~~~~--~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 108 (518)
T cd07125 31 WEAIPIINGEETE--TGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANR 108 (518)
T ss_pred cccCceECCEEee--CCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 3456899999984 588999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||+.+++.|+..+++.++|+++.+++..+.. .+.. .+...+.+++|+|||++|+|||||+...+++
T Consensus 109 ~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 187 (518)
T cd07125 109 GELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGP-TGELNGLELHGRGVFVCISPWNFPLAIFTGQ 187 (518)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC-CCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence 9999999999999999999999999999999999888766543 2222 2566789999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.+.+..|+.|++|+.|+||||+++|+.|++.++
T Consensus 188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa 267 (518)
T cd07125 188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALA 267 (518)
T ss_pred HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999876678899999999999999999999999999888
Q ss_pred cc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 291 GT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 291 ~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++
T Consensus 268 ~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~ 347 (518)
T cd07125 268 ERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWD 347 (518)
T ss_pred hccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCC
Confidence 54 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE 445 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~ 445 (530)
+++++||++++.+++++.+++++++. ++++++||.....+|+|++|||+.++ +|.+++||+||||++|++|+ |+|
T Consensus 348 ~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~FgPVl~v~~~~~~~~d 424 (518)
T cd07125 348 LSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFGPILHVIRFKAEDLD 424 (518)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccCCeEEEEEeCCCCHH
Confidence 99999999999999999999999987 57899998754225799999999887 89999999999999999999 999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCC-CChHHHHHhhheeeEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV 522 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v 522 (530)
|||+++|+++|||++||||+|.++++++++++++|+||||+.... .+.+||||+|.||+|+ ++|++++++|++.|+|
T Consensus 425 eAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~~~gg~~~~~~ft~~k~i 504 (518)
T cd07125 425 EAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGPKAGGPNYLLRFGNEKTV 504 (518)
T ss_pred HHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCcccccHHHHHHhcceEEE
Confidence 999999999999999999999999999999999999999987653 3568999999999995 6899999999999999
Q ss_pred EEe
Q 009618 523 CLG 525 (530)
Q Consensus 523 ~~~ 525 (530)
+++
T Consensus 505 ~~~ 507 (518)
T cd07125 505 SLN 507 (518)
T ss_pred EEE
Confidence 875
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-96 Score=780.61 Aligned_cols=445 Identities=43% Similarity=0.650 Sum_probs=423.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++++++... .+...+. .++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999987762 2222222 2356778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
..+++++.++ +|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g-~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~dAD 235 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPDVD 235 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeC-ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCCCC
Confidence 9999999996 99999999998 456889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++..
T Consensus 236 l~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ 315 (446)
T cd07106 236 IDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKA 315 (446)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473 (530)
Q Consensus 394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~ 473 (530)
+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++
T Consensus 316 ~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~ 395 (446)
T cd07106 316 KGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAV 395 (446)
T ss_pred CCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 99999999976533478999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 396 ~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 396 ARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999998877788999999999999999999999999999986
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-96 Score=778.56 Aligned_cols=431 Identities=28% Similarity=0.416 Sum_probs=403.0
Q ss_pred CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHH
Q 009618 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEA 167 (530)
Q Consensus 89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~ 167 (530)
....|++.++++|++||+.|+.++..+|.++|++++++|++|+++|++++++|+|||..++.. |+..+++.++|+++.+
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999975 9999999999999988
Q ss_pred HHHhCccc---CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618 168 KRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (530)
Q Consensus 168 ~~~~g~~~---~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 244 (530)
++..+... +....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 87765211 1112234578999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324 (530)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s 324 (530)
+|+|++|+|+| +.+.+..|+. ++|++|+||||+++|+.|++.+++++||+++|||||||+||++|||++.|++.++++
T Consensus 166 lp~gvv~vv~G-~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g 243 (484)
T PLN02174 166 LDSSAVRVVEG-AVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAG 243 (484)
T ss_pred CCCCEEEEEEC-ChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999998 4455677876 899999999999999999999999999999999999999999999999999999999
Q ss_pred Hh-hccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618 325 KF-RNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 403 (530)
Q Consensus 325 ~f-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 403 (530)
+| .|+||.|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||.
T Consensus 244 ~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~ 321 (484)
T PLN02174 244 KWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGE 321 (484)
T ss_pred HhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCC
Confidence 99 59999999999999999999999999999999999999988 89999999999999999999997 78999999997
Q ss_pred ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 009618 404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 483 (530)
Q Consensus 404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~ 483 (530)
.. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+||
T Consensus 322 ~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~ 400 (484)
T PLN02174 322 KD-RENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV 400 (484)
T ss_pred cC-CCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEE
Confidence 53 35789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCCC--CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 484 VNEGLIST--EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 484 vN~~~~~~--~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
||++.... +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 401 IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 401 VNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred ECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99876543 6789999999999999999999999999999876
|
|
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-96 Score=782.33 Aligned_cols=447 Identities=44% Similarity=0.710 Sum_probs=426.4
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (530)
Q Consensus 73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (530)
+++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 81 (453)
T cd07094 2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARVE 81 (453)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (530)
+..+++.++|+++.+.+..+...+... .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~ 161 (453)
T cd07094 82 VDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASK 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999998887665443322 2456778899999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 308 (530)
Q Consensus 229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV 308 (530)
+|+++..+++++.++|+|+|+++++++++.++++.|+.|++++.|+||||+++|+.|++.+ .++|+++|+|||||+||
T Consensus 162 ~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~iV 239 (453)
T cd07094 162 TPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVIV 239 (453)
T ss_pred chHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceEE
Confidence 9999999999999999999999999997778899999999999999999999999999887 58999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388 (530)
Q Consensus 309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 388 (530)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++
T Consensus 240 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 319 (453)
T cd07094 240 DRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWV 319 (453)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
++++.+|+++++||... ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 320 ~~a~~~Ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 396 (453)
T cd07094 320 EEAVEAGARLLCGGERD---GALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLN 396 (453)
T ss_pred HHHHHCCCEEEeCccCC---CeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHH
Confidence 99999999999998653 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 469 RTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++.++++++++|+||||++... .+.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus 397 ~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 397 VAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred HHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 9999999999999999998654 4689999999999999999999999999999863
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-96 Score=781.15 Aligned_cols=449 Identities=33% Similarity=0.519 Sum_probs=428.0
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (530)
+||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHH
Q 009618 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234 (530)
Q Consensus 155 ~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 234 (530)
.+++.++|++..+++..+........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999999888765543222223566788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCH
Q 009618 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADL 314 (530)
Q Consensus 235 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~ 314 (530)
.|.++++++|+|+|++|++++++ +.+..|+.|++|+.|+||||+++|+.|++.++++++|+++|+|||||+||++|||+
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~dADl 239 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADL 239 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCCCCH
Confidence 99999999999999999999966 78899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394 (530)
Q Consensus 315 ~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 394 (530)
|.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||+++..+++++++++++++.+
T Consensus 240 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ 319 (452)
T cd07102 240 DAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAK 319 (452)
T ss_pred HHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 395 GAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 395 Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.
T Consensus 320 ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 399 (452)
T cd07102 320 GARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAE 399 (452)
T ss_pred CCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHH
Confidence 999999997532 35789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++|+||||++...++..||||+|+||+|+++|++|+++|++.|++++
T Consensus 400 ~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 400 ALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999999999999987777789999999999999999999999999999863
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-96 Score=787.30 Aligned_cols=464 Identities=25% Similarity=0.354 Sum_probs=420.5
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhc-HhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~-~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
++||+|+|+.+ ++.+++++||.||+++++++. +.+|+++|+++|++|+ +.|+.+++.+|+++|++++++|++++++|
T Consensus 6 ~~~i~G~~~~~-~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~el 83 (521)
T PRK11903 6 ANYVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAY 83 (521)
T ss_pred hhhCCCEEEcC-CCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999975 357899999999999999997 8899999999999995 99999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC--------CCceeEEEEee-ceEEEEECCCCcchH
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL--------PDRRLFVLKQP-VGVAGAITPWNFPLA 205 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~--------~g~~~~~~~~P-~GVv~~i~p~n~P~~ 205 (530)
++++++|+|||+.+++.|+..+++.++||++++..+.+....... .....+..++| +|||++|+|||||+.
T Consensus 84 a~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 163 (521)
T PRK11903 84 YDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAW 163 (521)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHH
Confidence 999999999999999999999999999999988776543211110 12234667899 699999999999999
Q ss_pred HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHH
Q 009618 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284 (530)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 284 (530)
.+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|++.++++.| ++++.|+||||+++|+.
T Consensus 164 ~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G~~ 240 (521)
T PRK11903 164 GLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETAAV 240 (521)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHHHH
Confidence 999999999999999999999999999999999999999 99999999998666655544 78999999999999999
Q ss_pred HHHHH--hcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh
Q 009618 285 LMAGA--AGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357 (530)
Q Consensus 285 i~~~~--a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~ 357 (530)
|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++||+|+++|++++
T Consensus 241 v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~ 320 (521)
T PRK11903 241 LRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARL 320 (521)
T ss_pred HHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHHHH
Confidence 99864 478999999999999999999999 59999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceEeceEecCCCC--CCccccc
Q 009618 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKS--EMLVSRE 429 (530)
Q Consensus 358 ~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~------~~~~~~~Ptvl~~~~~--~~~~~~e 429 (530)
+++++|+|+++++++||++++.+++++.++++. ..+|+++++||.... .+|+|++|||+.++++ ++.+++|
T Consensus 321 ~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~-~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~~e 399 (521)
T PRK11903 321 AKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAA-LRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV 399 (521)
T ss_pred HhccCCCCCCCcCccCCCCCHHHHHHHHHHHHH-HhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHHhC
Confidence 999999999999999999999999999999985 568999999996521 2478999999986554 4788999
Q ss_pred ccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------CCCCCcccC
Q 009618 430 EVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI---------STEVAPFGG 498 (530)
Q Consensus 430 E~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~v~vN~~~~---------~~~~~pfGG 498 (530)
|+||||++|++|+|+||+|+++|+++|||++||||+|.+++.++++++ ++|+||||+... ..+.+||||
T Consensus 400 E~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~PfGG 479 (521)
T PRK11903 400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLHGG 479 (521)
T ss_pred cccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999 899999997542 345789999
Q ss_pred CCCCCCCCC-ChHHHHHhhheeeEEEEe
Q 009618 499 VKQSGLGRE-GSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 499 ~~~SG~G~~-~g~~~l~~~~~~k~v~~~ 525 (530)
+|.||+|++ ||.+++++||+.|+|...
T Consensus 480 ~k~SG~Gr~~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 480 PGRAGGGEELGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred CCcCcCCcccccHHHHHHHhccceeeCC
Confidence 999999999 558999999998887543
|
|
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=781.53 Aligned_cols=466 Identities=39% Similarity=0.609 Sum_probs=441.9
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcC-CHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKL-TAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~-~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+. +++++++||.||+++++++.++.+|+++++++|++|++.|+.+ +.++|.++|++++++|++++++
T Consensus 2 ~~~~i~g~~~~~~-~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~e 80 (473)
T cd07082 2 FKYLINGEWKESS-GKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEE 80 (473)
T ss_pred CCceECCEEecCC-CCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999864 6899999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC----CCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL----PDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~----~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
|++++++|+|||..++..|+..+++.++|+++..+++.+...+... .+...+.+++|+|||++|+|||||+...++
T Consensus 81 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 81 VANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 9999999999999999999999999999999998887665443321 355678899999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|.++..+.+++.++|+|+|+++++++++.++++.|+.|++++.|+||||+++|+.|++.+
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 240 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQH 240 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999997778899999999999999999999999999987
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+ ++|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.++++++++|+|.+++
T Consensus 241 ~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~ 318 (473)
T cd07082 241 P--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMPWDNG 318 (473)
T ss_pred C--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCC
Confidence 6 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++++++++++.+|+++++||... .++|++|||+.+++++|++++||+||||++|++|+|+||+|+
T Consensus 319 ~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~ 396 (473)
T cd07082 319 VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIE 396 (473)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999764 378999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.+++.++++++++|+||||++.... +.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~~~ 473 (473)
T cd07082 397 LANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIVIN 473 (473)
T ss_pred HHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEEEC
Confidence 999999999999999999999999999999999999976543 4689999999999999999999999999999763
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=781.33 Aligned_cols=455 Identities=30% Similarity=0.450 Sum_probs=426.9
Q ss_pred CCccccceecCEeeeCCCCCeEEeecCCCC-CEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPATG-EVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129 (530)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g-~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~ 129 (530)
..++.++||||+|+. ++++++++||.|+ +++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++
T Consensus 34 ~~~~~~~~i~g~~~~--~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~ 111 (500)
T TIGR01238 34 KTWQAAPIIGHSYKA--DGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLEL 111 (500)
T ss_pred CceecCceECCEEec--CCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 567889999999987 4789999999996 8999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
++++|++++++|+|||..+++.|+..+++.++||++..+...+. ..++|+|||++|+|||||+...++
T Consensus 112 ~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~~P~GVV~~I~pwN~P~~~~~~ 179 (500)
T TIGR01238 112 HMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSVESRGVFVCISPWNFPLAIFTG 179 (500)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eeccCcceEEEECCCchHHHHHHH
Confidence 99999999999999999999999999999999999887654321 358999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|++++++.+.++.|+.|++|+.|+||||+.+|+.|++.+
T Consensus 180 ~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~a 259 (500)
T TIGR01238 180 QISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTL 259 (500)
T ss_pred HHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred hccc---ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618 290 AGTV---KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366 (530)
Q Consensus 290 a~~~---~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 366 (530)
+++. +|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|.++++++++|+|.
T Consensus 260 a~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~ 339 (500)
T TIGR01238 260 AQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPH 339 (500)
T ss_pred hhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCC
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc---cCCCCceEeceEecCCCCCCcccccccccceEEEEEeC-
Q 009618 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR---HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK- 442 (530)
Q Consensus 367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~---~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~- 442 (530)
++++++||++++.++++++++++++++.|++++.++.. ...+|+|++|||+.+ ++|.+++||+||||++|++|+
T Consensus 340 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 340 LLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHhhCCCcCCEEEEEEeCC
Confidence 99999999999999999999999999999998754321 113579999999984 688899999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhhe
Q 009618 443 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE 518 (530)
Q Consensus 443 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~ 518 (530)
++||||+++|+++|||+++|||+|.+++.++++++++|+|+||+..... +.+||||+|.||+| +++|.+++++|++
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~~~gg~~~~~~~~~ 497 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQ 497 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCCccCCHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999876533 45799999999999 8999999999999
Q ss_pred eeE
Q 009618 519 IKY 521 (530)
Q Consensus 519 ~k~ 521 (530)
.|+
T Consensus 498 ~k~ 500 (500)
T TIGR01238 498 VQY 500 (500)
T ss_pred hcC
Confidence 884
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-95 Score=777.44 Aligned_cols=451 Identities=45% Similarity=0.727 Sum_probs=429.7
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++||.||+++++++.++.+|++.++++|++|++ .|+.++.++|.++|++++++|.+++++|++++++|+|||+.+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 499999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 231 (530)
|+..+++.++||+...+...+...+....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999998887765544443324566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311 (530)
Q Consensus 232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d 311 (530)
++..++++|.++|+|+|++|++++++.+.++.|+.|++++.|+||||+++|+.|++.+++++||+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~d 240 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIVFDD 240 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEECCC
Confidence 99999999999999999999999977778999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
||++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++++++
T Consensus 241 Adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a 320 (457)
T cd07114 241 ADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARA 320 (457)
T ss_pred CCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 392 VSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 392 ~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+.+|+++++||.... ..|+|++|||+.++++++.+++||+||||++|++|+|.||||+++|+++|||+++|||+|.
T Consensus 321 ~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~ 400 (457)
T cd07114 321 REEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDL 400 (457)
T ss_pred HHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCH
Confidence 999999999997642 2478999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+|+++|++.|+|++
T Consensus 401 ~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 401 ARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred HHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 999999999999999999877777889999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-95 Score=806.63 Aligned_cols=464 Identities=26% Similarity=0.364 Sum_probs=421.4
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
..++||||+|+.+ ++++++++||.||+++++++.++ +|++.|+++|++| ++.|+++++.+|+++|++++++|+++++
T Consensus 4 ~~~~~i~G~~~~~-~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 4 KLQSYVAGRWQTG-QGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred cccceecCEEEcC-CCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 3468999999986 56789999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--------CcccCCCCCC-ceeEEEEeec-eEEEEECCCCc
Q 009618 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--------GEIIPATLPD-RRLFVLKQPV-GVAGAITPWNF 202 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--------g~~~~~~~~g-~~~~~~~~P~-GVv~~i~p~n~ 202 (530)
+|++ +++|+|||+.+++.|+..+++.++||+..+++.. |...+...++ ...+..++|+ |||++|+||||
T Consensus 82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence 9998 5899999999999999999999999999886643 3333222112 2246788997 99999999999
Q ss_pred chHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHH
Q 009618 203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281 (530)
Q Consensus 203 P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~ 281 (530)
|+.+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+.. +.+..++.+++|+||||+++
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~---~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG---DLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---HHhhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 99999999998532 23333467999999999999
Q ss_pred HHHHHHH--HhcccceEEeecCCCccEEEecCCC-----HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHH
Q 009618 282 GKKLMAG--AAGTVKKVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFS 354 (530)
Q Consensus 282 g~~i~~~--~a~~~~~~~lelgG~~~~iV~~dAD-----~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~ 354 (530)
|+.|++. +++++||+++|||||||+||++||| +|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 317 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEALR 317 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHHHHH
Confidence 9999985 4588999999999999999999995 99999999999999999999999999999999999999999
Q ss_pred HHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-------CCCCceEeceEecCCCC--CCc
Q 009618 355 KAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-------SLGMTFYEPTVLSNVKS--EML 425 (530)
Q Consensus 355 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-------~~~~~~~~Ptvl~~~~~--~~~ 425 (530)
++++++++|+|+++++++||++++.+++++.+++++|+++ |++++||... ..+|+|++|||+.++++ ++.
T Consensus 318 ~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 318 ARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 9999999999999999999999999999999999999999 9999999531 12478999999999998 579
Q ss_pred ccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCC--------C-CCCC
Q 009618 426 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLI--------S-TEVA 494 (530)
Q Consensus 426 ~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~--------~-~~~~ 494 (530)
+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.+++++++ +|+||||..+. . .+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999997 99999997521 1 2578
Q ss_pred cccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 009618 495 PFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 495 pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~ 524 (530)
||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 477 pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 477 VHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 9999999999999 57999999999999864
|
|
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-95 Score=775.57 Aligned_cols=447 Identities=41% Similarity=0.659 Sum_probs=423.0
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
|+..++..++|++..+.+..+...+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999998877655433221 1345667889999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|.++..++++++++|+|+|++|+++++ .+.+..|+.|++++.|+||||+.+|+.|++.++ .+|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~-~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~p~i 237 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCS-RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNAAVI 237 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCC-ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCCcEE
Confidence 99999999999999999999999999984 567899999999999999999999999999876 469999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++
T Consensus 238 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 317 (452)
T cd07147 238 VDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317 (452)
T ss_pred ECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 318 i~~a~~~Ga~~l~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~ 394 (452)
T cd07147 318 VNEAVDAGAKLLTGGKRD---GALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDL 394 (452)
T ss_pred HHHHHHCCCEEEecCCcC---CEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 999999999999999763 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++.++++++++|+||||+.... .+.+||||+|+||+|+++|++|+++|++.|+|++
T Consensus 395 ~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 395 EKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred HHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999999987654 4678999999999999999999999999999874
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-95 Score=773.39 Aligned_cols=449 Identities=44% Similarity=0.685 Sum_probs=426.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GE 152 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~E 152 (530)
++||.||+++++++.++.+|++.+++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998775 59
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
+..+++.+++++..++.+.+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999988877655433222334567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+.+++++ |+|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~dA 239 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFDDA 239 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECCCC
Confidence 9999999999 999999999998777788999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|+|.|++.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++++++++.++++++.
T Consensus 240 dl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~ 319 (450)
T cd07092 240 DLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP 319 (450)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618 393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~ 472 (530)
+|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+++++
T Consensus 320 -~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~ 398 (450)
T cd07092 320 -AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMR 398 (450)
T ss_pred -cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHH
Confidence 9999999997643357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++++++|+|+||++....+.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 399 ~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 450 (450)
T cd07092 399 LSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVMV 450 (450)
T ss_pred HHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEeC
Confidence 9999999999999987777889999999999999999999999999999863
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-95 Score=771.41 Aligned_cols=440 Identities=39% Similarity=0.617 Sum_probs=419.1
Q ss_pred CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 009618 80 GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKF 159 (530)
Q Consensus 80 g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~ 159 (530)
|+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH-HHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA-LAAAE 238 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~-~~l~~ 238 (530)
+++++..+....+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~~-~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCcccccc-CCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 9999987766555544432 456678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHH
Q 009618 239 LALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 318 (530)
Q Consensus 239 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~ 318 (530)
++.++|+|+|++|++++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|+
T Consensus 160 ~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa 238 (443)
T cd07152 160 LFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAA 238 (443)
T ss_pred HHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHH
Confidence 99999999999999998 56788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeE
Q 009618 319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV 398 (530)
Q Consensus 319 ~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v 398 (530)
+.+++++|.|+||.|++++|||||+++||+|+++|.++++++++|+|.++++++||++++.+++++.+++++++.+|+++
T Consensus 239 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v 318 (443)
T cd07152 239 SNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARL 318 (443)
T ss_pred HHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc
Q 009618 399 LLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE 478 (530)
Q Consensus 399 l~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~ 478 (530)
++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.+++++++
T Consensus 319 l~gg~~~---g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~ 395 (443)
T cd07152 319 EAGGTYD---GLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLR 395 (443)
T ss_pred EeccCcC---CEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCC
Confidence 9999753 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEECCCCCCC-CCCcccCCCCCCCC-CCChHHHHHhhheeeEEEE
Q 009618 479 YGLVGVNEGLIST-EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 479 ~G~v~vN~~~~~~-~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~ 524 (530)
+|+||||++.... +.+||||+|.||+| +++|++||++|++.|++++
T Consensus 396 ~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 396 TGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred cCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 9999999877654 57999999999999 8899999999999999864
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-95 Score=772.60 Aligned_cols=450 Identities=64% Similarity=1.031 Sum_probs=432.6
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV 153 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev 153 (530)
++||.||+++++++.++.+|++.+++.|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHH
Q 009618 154 DYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~ 233 (530)
..+++.++|++..+++..+...+...++...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999999988877766555444567788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 234 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
..+.++|+++|+|+|+++++++++.+.++.|+.|++++.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 240 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFDDAD 240 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCC
Confidence 99999999999999999999987777889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
++.|++.+++++|.|+||.|+++++||||++++|+|+++|.++++++++|+|.++++++||++++.+++++.+++++++.
T Consensus 241 l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~ 320 (451)
T cd07103 241 LDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVA 320 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473 (530)
Q Consensus 394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~ 473 (530)
+|+++++||.....+|+|++|||+.++++++.++++|+||||++|++|+|+||||+++|+++|||+++|||+|.++++++
T Consensus 321 ~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~ 400 (451)
T cd07103 321 KGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRV 400 (451)
T ss_pred CCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHH
Confidence 99999999976533578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 401 ~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 401 AEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999998877788999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-95 Score=773.30 Aligned_cols=449 Identities=42% Similarity=0.666 Sum_probs=426.1
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-HHHHHH
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL-KEAVGE 152 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~E 152 (530)
++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 699999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
+..+++.++|++.....+.+...+.. .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999998877666554432 35566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+.+++.++ +|+|++|++++++.+.++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||++||
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~~dA 238 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVFPDA 238 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEECCCC
Confidence 99999999986 99999999998777888999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHH-HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAA-KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 313 D~~~a~~~i~~s-~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
|++.|++.++++ +|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.++++++
T Consensus 239 dl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a 318 (457)
T cd07108 239 DLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLG 318 (457)
T ss_pred CHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999 4999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-CCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009618 392 VS-KGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466 (530)
Q Consensus 392 ~~-~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d 466 (530)
++ +|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 319 ~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d 398 (457)
T cd07108 319 LSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRD 398 (457)
T ss_pred HhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCC
Confidence 98 9999999997642 347899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHH-HHhhheeeEEEE
Q 009618 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYG-MDEFLEIKYVCL 524 (530)
Q Consensus 467 ~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~-l~~~~~~k~v~~ 524 (530)
.++++++++++++|+|+||++....+.+||||+|.||+|+++|.++ +++|++.|+|++
T Consensus 399 ~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~ 457 (457)
T cd07108 399 LGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457 (457)
T ss_pred HHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence 9999999999999999999987777789999999999999999866 799999999863
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-94 Score=771.29 Aligned_cols=447 Identities=41% Similarity=0.642 Sum_probs=424.2
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVD 154 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~ 154 (530)
+||+||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCcc-cCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHH
Q 009618 155 YGAKFIEFYAEEAKRVYGEI-IPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231 (530)
Q Consensus 155 ~~~~~l~~~a~~~~~~~g~~-~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~ 231 (530)
.+++.++|+++.+.+..+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999887765442 2211 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311 (530)
Q Consensus 232 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d 311 (530)
++..|.+++.++|+|+|++|++++++ +.+..|+.| .|+.|+||||+++|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~d 238 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLAD 238 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCC
Confidence 99999999999999999999999865 788899987 5999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++.++++++
T Consensus 239 adl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (453)
T cd07099 239 ADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA 318 (453)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
+++|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~ 398 (453)
T cd07099 319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAE 398 (453)
T ss_pred HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHH
Confidence 99999999999764234789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 472 RVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
++++++++|+||||+... ..+.+||||+|.||+|+++|++++++|++.|+|+
T Consensus 399 ~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 399 AIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999998754 3468999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-94 Score=767.23 Aligned_cols=444 Identities=43% Similarity=0.641 Sum_probs=419.0
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Q 009618 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152 (530)
Q Consensus 73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E 152 (530)
+++||+||+++++++.++.+|++.++++|+++ |+.++..+|.++|+++++.|++++++|++++++|+|||+.+++.|
T Consensus 2 ~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~e 78 (451)
T cd07146 2 EVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRYE 78 (451)
T ss_pred CccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 47899999999999999999999999998864 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCC
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~ 228 (530)
+..+++.++||++.+....+...+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999998877655443321 13455678999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEE
Q 009618 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 308 (530)
Q Consensus 229 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV 308 (530)
+|+++..+.++++++|+|+|++|++++++.++++.|+.|++++.|+||||+.+|+.|++.++ .+++++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 99999999999999999999999999877788999999999999999999999999998775 6899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388 (530)
Q Consensus 309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 388 (530)
++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||++++.+++++++++
T Consensus 237 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v 316 (451)
T cd07146 237 MDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRV 316 (451)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 317 ~~a~~~Ga~vl~gg~~~---g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~ 393 (451)
T cd07146 317 EEAIAQGARVLLGNQRQ---GALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLD 393 (451)
T ss_pred HHHHhCCCEEEeCCCcC---CEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999999998653 689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCC-CCCChHHHHHhhheeeEEEE
Q 009618 469 RTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGL-GREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~-G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++++++++++|+||||+.... .+.+||||+|.||+ |+++|++|+++|++.|+|++
T Consensus 394 ~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 394 TIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred HHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEeC
Confidence 9999999999999999986543 46799999999995 89999999999999999863
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-94 Score=761.54 Aligned_cols=428 Identities=43% Similarity=0.667 Sum_probs=406.8
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~ 173 (530)
++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+.
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999998876543
Q ss_pred -ccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618 174 -IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (530)
Q Consensus 174 -~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~ 252 (530)
..+. ++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 2322 2456788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCc
Q 009618 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 332 (530)
Q Consensus 253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~ 332 (530)
+++++ +.+..|+.|++|+.|.||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.
T Consensus 159 v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~ 237 (429)
T cd07100 159 LLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQS 237 (429)
T ss_pred EeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCC
Confidence 99854 56789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceE
Q 009618 333 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412 (530)
Q Consensus 333 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~ 412 (530)
|++++|||||+++||+|+++|+++++++++|+|+|+++++||++++.+++++.+++++++.+|+++++||...+..|+|+
T Consensus 238 C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~ 317 (429)
T cd07100 238 CIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFY 317 (429)
T ss_pred CCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997643346899
Q ss_pred eceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCC
Q 009618 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492 (530)
Q Consensus 413 ~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~ 492 (530)
+|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||+++|||+|.++++++++++++|+||||++....+
T Consensus 318 ~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~ 397 (429)
T cd07100 318 PPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDP 397 (429)
T ss_pred cCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887777
Q ss_pred CCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 493 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
.+||||+|.||+|+++|++++++|++.|+|++
T Consensus 398 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 429 (429)
T cd07100 398 RLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429 (429)
T ss_pred CCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence 89999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-94 Score=765.67 Aligned_cols=450 Identities=34% Similarity=0.552 Sum_probs=420.4
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHH
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEV 153 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev 153 (530)
+||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++++|++++++|++++++|+|||+.+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999996 599
Q ss_pred HHHHHHHHHHHHHHHHHhCc-ccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618 154 DYGAKFIEFYAEEAKRVYGE-IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (530)
Q Consensus 154 ~~~~~~l~~~a~~~~~~~g~-~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 230 (530)
..+++.++|++..+...... ..+.. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999887664332 22221 1234567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccE
Q 009618 231 LTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 306 (530)
Q Consensus 231 ~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~ 306 (530)
+++..++++ |.++|+|+|++|+|++++ +.++.|+.|++|+.|.||||+.+|+.|++.+++++||+++|+|||||+
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~ 239 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPA 239 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeE
Confidence 999876655 578999999999999955 789999999999999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHH
Q 009618 307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 386 (530)
Q Consensus 307 iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~ 386 (530)
||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|+++++++++|+|+++++++||++++.+++++.+
T Consensus 240 iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~ 319 (465)
T cd07098 240 IVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEE 319 (465)
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEE
Q 009618 387 FVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 462 (530)
Q Consensus 387 ~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v 462 (530)
++++++.+|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|
T Consensus 320 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i 399 (465)
T cd07098 320 LVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASV 399 (465)
T ss_pred HHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEE
Confidence 99999999999999986532 24799999999999999999999999999999999999999999999999999999
Q ss_pred EcCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 463 FTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 463 ~s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
||+|.+++.++++++++|+||||.... ..+.+||||+|.||+|+++|++++++|++.|+|+++
T Consensus 400 ~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 400 FGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 999999999999999999999998653 246899999999999999999999999999999774
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-94 Score=813.44 Aligned_cols=464 Identities=31% Similarity=0.468 Sum_probs=435.2
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCC-EEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGE-VIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~-~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
.+....+|+| ++++++++||.|++ ++++++.++.++++.|++.|++||+.|+.++..+|+++|++++++|+++
T Consensus 550 ~~~~~~~i~g------~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~ 623 (1038)
T PRK11904 550 QWQAGPIING------EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEAN 623 (1038)
T ss_pred CceecceEcC------CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 4566678888 36789999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~--~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
+++|+.++++|+|||+.++..|+..++++|+||+..+++..+.. ++.. .++.+...++|+|||++|+|||||+.+++
T Consensus 624 ~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~-~ge~n~~~~~P~GVv~~IsPwNfPlai~~ 702 (1038)
T PRK11904 624 RAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGP-TGESNELRLHGRGVFVCISPWNFPLAIFL 702 (1038)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCC-CCceeEEEEecceEEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999998876542 2322 36788999999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.||+|+.|+||||+++|+.|.+.
T Consensus 703 ~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~ 782 (1038)
T PRK11904 703 GQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRT 782 (1038)
T ss_pred HHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred Hhcc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 289 AAGT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 289 ~a~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++.+ ++|+++|+|||||+||++|||+|+|++.+++|+|.++||+|++++++|||++++|+|+++|+++++++++|+|
T Consensus 783 ~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp 862 (1038)
T PRK11904 783 LAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDP 862 (1038)
T ss_pred HhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCc
Confidence 8865 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeC-
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK- 442 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~- 442 (530)
.++++++||+|++.+++++.++|+++.. |+++++||..++ ..|+|+.|||+.. +++.+++||+||||++|++|+
T Consensus 863 ~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~ 939 (1038)
T PRK11904 863 RLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKA 939 (1038)
T ss_pred ccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCC
Confidence 9999999999999999999999999765 899999997653 2479999999974 677889999999999999998
Q ss_pred -CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhhe
Q 009618 443 -TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLE 518 (530)
Q Consensus 443 -~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~ 518 (530)
++||+|+++|+++|||+++|||+|.++++++++++++|+||||+...+. ..+||||+|.||+| +.||+++|++|++
T Consensus 940 ~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg~qPFGG~~~SG~G~kaGG~~~L~~f~~ 1019 (1038)
T PRK11904 940 SDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLLRFAT 1019 (1038)
T ss_pred CCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCCCCCCCCCCCCCCCCccchHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999987654 35899999999999 5699999999999
Q ss_pred eeEEEEe
Q 009618 519 IKYVCLG 525 (530)
Q Consensus 519 ~k~v~~~ 525 (530)
.|+|+++
T Consensus 1020 ~ktv~~~ 1026 (1038)
T PRK11904 1020 EKTVTVN 1026 (1038)
T ss_pred eEEEEEc
Confidence 9999875
|
|
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-93 Score=760.27 Aligned_cols=450 Identities=48% Similarity=0.767 Sum_probs=428.2
Q ss_pred eecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-H
Q 009618 74 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-E 152 (530)
Q Consensus 74 v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-E 152 (530)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 379999999999999999999999999999999999999999999999999999999999999999999999998864 9
Q ss_pred HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH
Q 009618 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232 (530)
Q Consensus 153 v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~ 232 (530)
+..+++.++||++...+..+...+.. .+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQD-GGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccCC-CCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 99999999999988776544433322 35677889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 233 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+..+.++++++|+|+|+++++++++.+.++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||++||
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dA 239 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVFADA 239 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEECCCC
Confidence 99999999999999999999998777889999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|++.|++.+++++|.++||.|+++++||||++++|+|+++|+++++++++|+|.|+++++||++++.+.+++.+++++++
T Consensus 240 dl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~ 319 (455)
T cd07093 240 DLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELAR 319 (455)
T ss_pred CHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 393 SKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
.+|+++++||.... .+++|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+++|||+|.+
T Consensus 320 ~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~ 399 (455)
T cd07093 320 AEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLG 399 (455)
T ss_pred HCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHH
Confidence 99999999997642 24789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+++++++++++|+|+||+....++.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 400 ~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 400 RAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred HHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 99999999999999999988877889999999999999999999999999999863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-93 Score=760.26 Aligned_cols=448 Identities=46% Similarity=0.731 Sum_probs=423.9
Q ss_pred EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Q 009618 72 LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151 (530)
Q Consensus 72 ~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 151 (530)
|+++||.||+++++++.++.++++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
|+..+++.++|+++.+.+..+...+.. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988877665543321 1133457889999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|+++..+.+++.++|+|+|++|++++++.++++.|+.|+++++|+||||+++|+.|++.++ ++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~i 238 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEE
Confidence 999999999999999999999999999877777899999999999999999999999998875 789999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||++.|++.+++++|.++||.|++++++|||++++|+|+++|+++++++++|+|.++++++||++++.+.+++.++
T Consensus 239 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 239 VDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred ECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+++++.+|+++++||... ++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 319 i~~a~~~ga~v~~gg~~~---g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~ 395 (453)
T cd07149 319 VEEAVEGGARLLTGGKRD---GAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDL 395 (453)
T ss_pred HHHHHHCCCEEEeCCCCC---CeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCH
Confidence 999999999999998653 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 468 QRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++++++++++|+||||+.... .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 396 ~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~~ 453 (453)
T cd07149 396 QKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453 (453)
T ss_pred HHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEeC
Confidence 99999999999999999987653 4678999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=749.69 Aligned_cols=442 Identities=23% Similarity=0.325 Sum_probs=404.8
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhh--hcCCHHHH----HHHHHHHHHHHHHh
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSW--SKLTAAER----SKGLRKWYDLLMAH 130 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w--~~~~~~~R----~~iL~~~a~~l~~~ 130 (530)
+||+|+|+.+ +++++++||.||+++++++.++.+|++.|+++|++||+.| +.++..+| .++|+++++.|+++
T Consensus 1 ~~i~g~~~~~--~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~ 78 (489)
T cd07126 1 NLVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKP 78 (489)
T ss_pred CcCCCEEecC--CCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcC
Confidence 4799999885 5789999999999999999999999999999999999988 56779999 89999999999998
Q ss_pred --HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc--CCCCCCceeEEEEeeceEEEEECCCCcchHH
Q 009618 131 --KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII--PATLPDRRLFVLKQPVGVAGAITPWNFPLAM 206 (530)
Q Consensus 131 --~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~ 206 (530)
.++|++++++|+|||+.+++.|+..+++.++||++...+..+... +...++...+++++|+|||++|+|||||+.+
T Consensus 79 ~~~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 79 EVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 499999999999999999999999999999999998877766542 2223456778999999999999999999999
Q ss_pred HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHH
Q 009618 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (530)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (530)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+ +..|+.|+++++|+||||+++|+.|.
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~~~v~~V~FTGS~~vGr~i~ 237 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLEANPRMTLFTGSSKVAERLA 237 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999986655 45688899999999999999999999
Q ss_pred HHHhcccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhccccCC
Q 009618 287 AGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD 364 (530)
Q Consensus 287 ~~~a~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~ 364 (530)
..++ +++.+|+||+||+||++|| |+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.++++++|+
T Consensus 238 ~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~ 314 (489)
T cd07126 238 LELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLED 314 (489)
T ss_pred HHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCC
Confidence 8876 5789999999999999999 999999999999999999999999999999995 6999999999999999874
Q ss_pred CCCCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCC----CC-ceEeceEecC------CCCCCcccccccc
Q 009618 365 GFGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSL----GM-TFYEPTVLSN------VKSEMLVSREEVF 432 (530)
Q Consensus 365 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~----~~-~~~~Ptvl~~------~~~~~~~~~eE~F 432 (530)
+++||+++.. .+++.++++++++ +|+++++||..... ++ .|++|||+.. ++++|++++||+|
T Consensus 315 -----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiF 388 (489)
T cd07126 315 -----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVF 388 (489)
T ss_pred -----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCc
Confidence 5789999998 9999999999997 99999999976431 23 3899999952 5789999999999
Q ss_pred cceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceE--EEECCCCCCCCC----CcccCCCCCCC
Q 009618 433 GPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL--VGVNEGLISTEV----APFGGVKQSGL 504 (530)
Q Consensus 433 GPv~~i~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~--v~vN~~~~~~~~----~pfGG~~~SG~ 504 (530)
|||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+...+++. .||||+|.||+
T Consensus 389 GPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~ 468 (489)
T cd07126 389 GPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGI 468 (489)
T ss_pred CCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCC
Confidence 99999999999 99999999999999999999999999999999999999 668887776554 89999999999
Q ss_pred CCCChH
Q 009618 505 GREGSK 510 (530)
Q Consensus 505 G~~~g~ 510 (530)
|+++..
T Consensus 469 g~~~~~ 474 (489)
T cd07126 469 GTPEAI 474 (489)
T ss_pred CCHhHH
Confidence 998754
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-92 Score=738.14 Aligned_cols=406 Identities=42% Similarity=0.689 Sum_probs=386.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECC
Q 009618 120 LRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITP 199 (530)
Q Consensus 120 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p 199 (530)
|++++++|++++++|++++++|+|||+.+++.|+..+++.++||+.+++...+...+...++...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999999887766543333335567889999999999999
Q ss_pred CCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCH
Q 009618 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGST 279 (530)
Q Consensus 200 ~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~ 279 (530)
||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|++++.+.++.|+.|++|++|+||||+
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~ 160 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSV 160 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999777889999999999999999999
Q ss_pred HHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc
Q 009618 280 AVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN 359 (530)
Q Consensus 280 ~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~ 359 (530)
.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++
T Consensus 161 ~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~ 240 (409)
T PRK10090 161 SAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA 240 (409)
T ss_pred HHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCC-CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEE
Q 009618 360 LKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438 (530)
Q Consensus 360 ~~~G~p~~~-~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i 438 (530)
+++|+|.++ ++++||++++.+++++++++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|
T Consensus 241 ~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v 320 (409)
T PRK10090 241 VQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPV 320 (409)
T ss_pred cCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEE
Confidence 999999998 9999999999999999999999999999999999765334689999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhhe
Q 009618 439 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLE 518 (530)
Q Consensus 439 ~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~ 518 (530)
++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.....+..||||+|+||+|+++|.+|+++|++
T Consensus 321 ~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~gl~~f~~ 400 (409)
T PRK10090 321 VAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQ 400 (409)
T ss_pred EEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999988766678999999999999999999999999
Q ss_pred eeEEEEe
Q 009618 519 IKYVCLG 525 (530)
Q Consensus 519 ~k~v~~~ 525 (530)
.|+|+++
T Consensus 401 ~k~v~~~ 407 (409)
T PRK10090 401 TQVVYLQ 407 (409)
T ss_pred eEEEEEe
Confidence 9999764
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-92 Score=746.11 Aligned_cols=432 Identities=29% Similarity=0.440 Sum_probs=404.5
Q ss_pred CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHH
Q 009618 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEE 166 (530)
Q Consensus 88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~ 166 (530)
.+..+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999995 6999999999999998
Q ss_pred HHHHhCcc---cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc
Q 009618 167 AKRVYGEI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (530)
Q Consensus 167 ~~~~~g~~---~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 243 (530)
.++..+.. .+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 87775532 222123456789999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec---CCCHHHHHHH
Q 009618 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD---DADLNVAVNG 320 (530)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~---dAD~~~a~~~ 320 (530)
+|+|++|+++| +.++++.|+.|+ ++.|+||||+++|+.|++.++++++|+++|+|||||+||++ |||+|.|++.
T Consensus 162 -lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~ 238 (484)
T PLN02203 162 -LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNR 238 (484)
T ss_pred -CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHH
Confidence 99999999998 778999999995 99999999999999999999999999999999999999997 6999999999
Q ss_pred HHHHHhh-ccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEe
Q 009618 321 ALAAKFR-NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 399 (530)
Q Consensus 321 i~~s~f~-~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl 399 (530)
+++++|. |+||.|++++|+|||++++|+|+++|.++++++++|+|.++ +++||++++.+++++++++++++.+ ++++
T Consensus 239 i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~ 316 (484)
T PLN02203 239 IVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIV 316 (484)
T ss_pred HHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEE
Confidence 9999996 89999999999999999999999999999999999999986 6899999999999999999999887 7899
Q ss_pred eCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 009618 400 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 479 (530)
Q Consensus 400 ~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~ 479 (530)
+||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++
T Consensus 317 ~gg~~~-~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~ 395 (484)
T PLN02203 317 HGGSID-EKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSS 395 (484)
T ss_pred eCCCcC-CCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCc
Confidence 998753 3579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 480 GLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 480 G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|.||||++.. ..+.+||||+|+||+|+++|.+++++|++.|+|+++
T Consensus 396 G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~ 443 (484)
T PLN02203 396 GSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRR 443 (484)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEc
Confidence 9999998754 336799999999999999999999999999999876
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-92 Score=804.07 Aligned_cols=454 Identities=29% Similarity=0.447 Sum_probs=424.8
Q ss_pred CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHH
Q 009618 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMA 129 (530)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~ 129 (530)
..++....|+|+. ..+..++++||.| ++++++++.++.+|++.|+++|++|++.|+.+|..+|+++|++++++|++
T Consensus 643 ~~~~~~p~~~~~~---~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~ 719 (1318)
T PRK11809 643 QKWQAAPMLEDPV---AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEA 719 (1318)
T ss_pred CCcccCCcccCcC---CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 3456677888842 2467899999999 89999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 130 HKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 130 ~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
++++|+.++++|+|||+.++..||.+++++|+||+.+++.... ...++|+|||++|+|||||+.++++
T Consensus 720 ~~~eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~~PlGVV~~IsPWNFPlai~~g 787 (1318)
T PRK11809 720 QMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTHRPLGPVVCISPWNFPLAIFTG 787 (1318)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceeecccEEEEECCCccHHHHHHH
Confidence 9999999999999999999999999999999999988765311 2458999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||++||+++..++++++++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 788 ~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~a 867 (1318)
T PRK11809 788 QVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNL 867 (1318)
T ss_pred HHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hccc------ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccC
Q 009618 290 AGTV------KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVG 363 (530)
Q Consensus 290 a~~~------~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G 363 (530)
++++ +|+++|+||+||+||++|||+|+|++.+++|+|.++||+|++.+++|||++++|+|+++|+++++++++|
T Consensus 868 A~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vG 947 (1318)
T PRK11809 868 AGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMG 947 (1318)
T ss_pred hhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCC
Confidence 8775 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEE
Q 009618 364 DGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 440 (530)
Q Consensus 364 ~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~ 440 (530)
+|.+.++++||+|++.+.+++.++|++++.+|++++.|+.... ..|+|++|||+.. +++.++++|+||||++|++
T Consensus 948 dP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 948 NPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEE
Confidence 9999999999999999999999999999999999999875432 3479999999985 6788899999999999999
Q ss_pred eC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCCC-CChHHHHHh
Q 009618 441 FK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDE 515 (530)
Q Consensus 441 ~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G~-~~g~~~l~~ 515 (530)
|+ ++||+|+++|+++|||+++|||+|.+++.++++++++|+||||+...+. ..+||||+|.||+|+ .||+++|.+
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~kaGGp~yL~~ 1105 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYR 1105 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCCCCCCHHHHHH
Confidence 97 7999999999999999999999999999999999999999999987754 358999999999996 599999999
Q ss_pred hheeeE
Q 009618 516 FLEIKY 521 (530)
Q Consensus 516 ~~~~k~ 521 (530)
|++.+.
T Consensus 1106 f~~~~~ 1111 (1318)
T PRK11809 1106 LLATRP 1111 (1318)
T ss_pred HhccCC
Confidence 999873
|
|
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-92 Score=742.62 Aligned_cols=426 Identities=35% Similarity=0.529 Sum_probs=399.4
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g 172 (530)
|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++....+..+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999988877765
Q ss_pred cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (530)
Q Consensus 173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~ 252 (530)
..... .++...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 44322 23567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc-cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 253 v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~-~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
+++ +.+.++.|+.|++++.|+||||+++|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 160 v~g-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ 238 (431)
T cd07095 160 VQG-GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQ 238 (431)
T ss_pred EeC-cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 998 457889999999999999999999999999987754 699999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618 332 TCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410 (530)
Q Consensus 332 ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~ 410 (530)
.|++++|||||++ ++|+|+++|.++++++++|+|.++++.+||+++..+++++.+++++++.+|+++++||...+.+++
T Consensus 239 ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~ 318 (431)
T cd07095 239 RCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTA 318 (431)
T ss_pred CCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCe
Confidence 9999999999999 999999999999999999999999999999999999999999999999999999999975434579
Q ss_pred eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 490 (530)
Q Consensus 411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~ 490 (530)
|++|||+ +++++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||.....
T Consensus 319 ~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~~ 397 (431)
T cd07095 319 FLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTG 397 (431)
T ss_pred EEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCC
Confidence 9999999 688999999999999999999999999999999999999999999999999999999999999999986653
Q ss_pred -CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
.+.+||||+|.||+|+++|.+|++ |++.|++
T Consensus 398 ~~~~~PfGG~k~SG~G~~~g~~~~~-~~~~~~~ 429 (431)
T cd07095 398 ASSTAPFGGVGLSGNHRPSAYYAAD-YCAYPVA 429 (431)
T ss_pred CCCCCCCCCcccccCCCCChHHHHH-HHhhhhc
Confidence 356899999999999999999999 5555554
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-91 Score=742.91 Aligned_cols=429 Identities=43% Similarity=0.704 Sum_probs=409.2
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g 172 (530)
|++++++.|++|++.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++....+..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999988877666
Q ss_pred cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHH-HHHHHHHHHHcCCCCccEE
Q 009618 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT-ALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~-~~~l~~~l~~aGlP~gvv~ 251 (530)
...+....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 555544356778899999999999999999999999999999999999999999999998 5789999999999999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
++++++.++++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 ~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 240 (431)
T cd07104 161 VVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQ 240 (431)
T ss_pred EeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 99997778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~ 411 (530)
.|+++++||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||... |+|
T Consensus 241 ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~---g~~ 317 (431)
T cd07104 241 ICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYE---GLF 317 (431)
T ss_pred CcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---Cce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998653 689
Q ss_pred EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC
Q 009618 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST 491 (530)
Q Consensus 412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~ 491 (530)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+|+||++...+
T Consensus 318 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 397 (431)
T cd07104 318 YQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVND 397 (431)
T ss_pred ECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred -CCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 492 -EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 492 -~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 398 ~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 398 EPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 689999999999999999999999999999863
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-91 Score=740.18 Aligned_cols=427 Identities=41% Similarity=0.632 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG 172 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g 172 (530)
|++.++++|++||+.|+.++.++|.++|++++++|+++.++|++++++|+|||..++..|+..+++.++|+++......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999998876544
Q ss_pred cccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618 173 EIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (530)
Q Consensus 173 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~ 252 (530)
...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 44443334566788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCC---chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhcc
Q 009618 253 VMGN---APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329 (530)
Q Consensus 253 v~g~---~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~ 329 (530)
++++ +.++++.|+.|++|+.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 9974 3457899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CC
Q 009618 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LG 408 (530)
Q Consensus 330 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~ 408 (530)
||.|++++++|||++++|+|+++|+++++++++| ++++||++++.+++++.+++++++++|+++++||.... .+
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~ 315 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPS 315 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 9999999999999999999999999999999998 68899999999999999999999999999999997653 35
Q ss_pred CceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCC
Q 009618 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488 (530)
Q Consensus 409 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~ 488 (530)
++|++|||+.+++++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.++++++++++++|+||||++.
T Consensus 316 ~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~ 395 (432)
T cd07105 316 GTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMT 395 (432)
T ss_pred CeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 489 IS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 489 ~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
.. .+.+||||+|.||+|+++|++|+++|++.|+|++
T Consensus 396 ~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 396 VHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 54 4679999999999999999999999999999864
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-91 Score=737.62 Aligned_cols=427 Identities=31% Similarity=0.475 Sum_probs=399.9
Q ss_pred CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHH
Q 009618 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (530)
Q Consensus 89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (530)
++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.++||+..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 59999999999999988
Q ss_pred HHHhCcccCCC----CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc
Q 009618 168 KRVYGEIIPAT----LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA 243 (530)
Q Consensus 168 ~~~~g~~~~~~----~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 243 (530)
.++.+...+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 77643322211 1245678899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHH
Q 009618 244 GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALA 323 (530)
Q Consensus 244 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~ 323 (530)
|+|+|++|++++++.+. ..|+.|+ |+.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++
T Consensus 161 ~lP~g~v~vv~g~~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~ 238 (436)
T cd07135 161 YLDPDAFQVVQGGVPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILW 238 (436)
T ss_pred hCCcCEEEEEcCCchhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHH
Confidence 69999999999866555 4689999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618 324 AKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 403 (530)
Q Consensus 324 s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 403 (530)
++|.++||.|++++|||||++++|+|+++|+++++++++|+| ++++++||+++..+.+++.++++++ |+++++||.
T Consensus 239 ~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~ 314 (436)
T cd07135 239 GKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGE 314 (436)
T ss_pred HHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCC
Confidence 999999999999999999999999999999999999999999 9999999999999999999999986 889999997
Q ss_pred ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEE
Q 009618 404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVG 483 (530)
Q Consensus 404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~ 483 (530)
.. .+++|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+
T Consensus 315 ~~-~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~ 393 (436)
T cd07135 315 MD-EATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVV 393 (436)
T ss_pred cC-CCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEE
Confidence 65 35799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCC--CCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 484 VNEGLIS--TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 484 vN~~~~~--~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
||+.... .+.+||||+|.||+|+++|.+|+++|++.|+|.
T Consensus 394 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 394 INDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred ECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 9987643 468999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-91 Score=796.98 Aligned_cols=457 Identities=30% Similarity=0.449 Sum_probs=427.5
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
.+....+|+|+... +.+++++||.| ++++++++.++.++++.|++.|++||+.|+.++.++|+++|++++++|+++
T Consensus 552 ~~~~~~~i~g~~~~---~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~ 628 (1208)
T PRK11905 552 TWHAAPLLAGGDVD---GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAH 628 (1208)
T ss_pred Ceeecceecccccc---CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHh
Confidence 45556778886443 66799999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
+++|+.++++|+||++.++..|+.+++++++||+..++...+ ...++|+|||++|+|||||+.+++++
T Consensus 629 ~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~~~P~GVv~~IsPwNfPlai~~g~ 696 (1208)
T PRK11905 629 MPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPGHKPLGPVVCISPWNFPLAIFTGQ 696 (1208)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------CceecCccEEEEEcCCcCHHHHHHHH
Confidence 999999999999999999999999999999999998866532 13568999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..++++|+++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|.+.++
T Consensus 697 i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A 776 (1208)
T PRK11905 697 IAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLA 776 (1208)
T ss_pred HHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999988
Q ss_pred cc---cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 291 GT---VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 291 ~~---~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
++ .+|+++|+|||||+||++|||+|+|++.+++|+|.++||+|++.+++|||++++|+|+++|+++++++++|+|.+
T Consensus 777 ~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d 856 (1208)
T PRK11905 777 KRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWR 856 (1208)
T ss_pred hhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchh
Confidence 76 489999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeC--CH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TE 444 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~ 444 (530)
.++++||+|++++++++.++|+++..+|+.++.|+.... .+|+|+.|||+.. +++.+++||+||||++|++|+ ++
T Consensus 857 ~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 857 LSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred ccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCH
Confidence 999999999999999999999999999998888764322 3579999999974 678899999999999999998 69
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC--CCCcccCCCCCCCCC-CChHHHHHhhheeeE
Q 009618 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST--EVAPFGGVKQSGLGR-EGSKYGMDEFLEIKY 521 (530)
Q Consensus 445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~--~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~ 521 (530)
||+|+++|+++||||++|||+|.+++.++++++++|+||||+...+. ..+||||+|.||+|+ .||+++|.+|++.|+
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~kaGGp~~L~~f~~~k~ 1014 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPLYLGRLVREAP 1014 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCCcCCCHHHHHHHhhcce
Confidence 99999999999999999999999999999999999999999987755 358999999999996 799999999999999
Q ss_pred EEEe
Q 009618 522 VCLG 525 (530)
Q Consensus 522 v~~~ 525 (530)
|+++
T Consensus 1015 v~~~ 1018 (1208)
T PRK11905 1015 TPIP 1018 (1208)
T ss_pred eecc
Confidence 9864
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-91 Score=734.75 Aligned_cols=420 Identities=30% Similarity=0.481 Sum_probs=392.9
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCc-
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGE- 173 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~- 173 (530)
+.+++|++||+.|+.+++.+|+++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++.+.+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999999999999999999999999999999999997 59999999999999988776544
Q ss_pred ccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 174 IIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 174 ~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
..+.. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12456788999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
+++| +.+.+..|+.|+ |+.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|+||
T Consensus 161 ~v~g-~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ 238 (449)
T cd07136 161 VVEG-GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQ 238 (449)
T ss_pred EEeC-ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCC
Confidence 9998 557788899775 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~ 411 (530)
.|++++|+|||++++|+|+++|+++++++++|+|.+ ++++||++++.+++++.+++++ +++++||... .+|+|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~-~~g~~ 311 (449)
T cd07136 239 TCVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTD-RETLY 311 (449)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhc-----ceEEECCCcC-CCCCE
Confidence 999999999999999999999999999999999998 8999999999999999999976 4899999764 35789
Q ss_pred EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-
Q 009618 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS- 490 (530)
Q Consensus 412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~- 490 (530)
++|||+.+++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+....
T Consensus 312 ~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~ 391 (449)
T cd07136 312 IEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIMHL 391 (449)
T ss_pred EeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred -CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
.+.+||||+|.||+|+++|.+++++||+.|+|+++
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 392 ANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred cCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 36799999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-91 Score=732.91 Aligned_cols=423 Identities=30% Similarity=0.456 Sum_probs=394.4
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.++||+....+..+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999999996 599999999999999886655432
Q ss_pred ---cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 175 ---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 175 ---~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
.+........++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 121122345678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHh-hccC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKF-RNSG 330 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f-~~~G 330 (530)
+++| +.+.++.|+.| ++++|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| .|+|
T Consensus 162 ~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~G 239 (432)
T cd07137 162 VIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNG 239 (432)
T ss_pred EEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCC
Confidence 9998 56788899987 6999999999999999999999999999999999999999999999999999999999 5999
Q ss_pred CccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410 (530)
Q Consensus 331 Q~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~ 410 (530)
|.|++++|+|||++++|+|+++|.++++++++|+| ++++++||++++.+++++.+++++++. |+++++||... .+++
T Consensus 240 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~-~~g~ 316 (432)
T cd07137 240 QACIAPDYVLVEESFAPTLIDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD-EKNL 316 (432)
T ss_pred CcccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC-CCCC
Confidence 99999999999999999999999999999999999 568999999999999999999999998 89999998653 3579
Q ss_pred eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 490 (530)
Q Consensus 411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~ 490 (530)
|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||.+...
T Consensus 317 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~ 396 (432)
T cd07137 317 YIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQ 396 (432)
T ss_pred EEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred --CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 491 --TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 491 --~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
.+.+||||+|.||+|+++|.+++++|++.|+|++
T Consensus 397 ~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 397 YAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred ccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence 3679999999999999999999999999999863
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-89 Score=730.57 Aligned_cols=430 Identities=29% Similarity=0.457 Sum_probs=400.4
Q ss_pred CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHH
Q 009618 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (530)
Q Consensus 89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (530)
.+.+|++.++++|++||+.|+.++.++|.++|++++++|++|+++|++++++|+|||..++. .|+..+++.++|+++..
T Consensus 4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~ 83 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL 83 (493)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999996 59999999999999887
Q ss_pred HHHhCcc-cC--CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618 168 KRVYGEI-IP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (530)
Q Consensus 168 ~~~~g~~-~~--~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 244 (530)
++..... .. ........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~- 162 (493)
T PTZ00381 84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY- 162 (493)
T ss_pred HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-
Confidence 7754332 11 1112345788999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324 (530)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s 324 (530)
+|+|++++++| +.+.+..|+.|+ +|.|+||||+.+|+.|+++++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 163 lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g 240 (493)
T PTZ00381 163 LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWG 240 (493)
T ss_pred CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHH
Confidence 99999999998 677888999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404 (530)
Q Consensus 325 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~ 404 (530)
+|.|+||.|+|++++|||++++|+|+++|++.++++. |++.++++++||+++.++++++.++++ .+|+++++||..
T Consensus 241 ~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~ 316 (493)
T PTZ00381 241 KFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV 316 (493)
T ss_pred HHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc
Confidence 9999999999999999999999999999999999986 777788999999999999999999996 379999999976
Q ss_pred cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEE
Q 009618 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 484 (530)
Q Consensus 405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~v 484 (530)
+ .++.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 317 ~-~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~I 395 (493)
T PTZ00381 317 D-IENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVI 395 (493)
T ss_pred C-CCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 4 346899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 485 NEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 485 N~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+... ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 396 N~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 396 NDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred CCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 98754 3468999999999999999999999999999998764
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-89 Score=723.17 Aligned_cols=422 Identities=33% Similarity=0.456 Sum_probs=392.1
Q ss_pred HHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC-HHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 97 AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 97 av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
.+++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++||++.+.+..+..
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56764 699999999999999887655433
Q ss_pred c-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 175 I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 175 ~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
. .. ...+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..++++++++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 2 11 112445788999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
++++ +.+.++.|+.|+ ++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 162 ~v~g-~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ 239 (434)
T cd07133 162 VVTG-GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQ 239 (434)
T ss_pred EEeC-ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCC
Confidence 9998 557888898776 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCC
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGM 409 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~ 409 (530)
.|++++|||||++++|+|+++|+++++++++|+ ++++++||++++.+++++.+++++++.+|+++++||.... .++
T Consensus 240 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g 317 (434)
T cd07133 240 TCVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAAT 317 (434)
T ss_pred cccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCC
Confidence 999999999999999999999999999999986 4788999999999999999999999999999999987642 347
Q ss_pred ceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 009618 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 489 (530)
Q Consensus 410 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~ 489 (530)
+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++.++++++++|+||||++..
T Consensus 318 ~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 397 (434)
T cd07133 318 RKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL 397 (434)
T ss_pred cEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred --CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 490 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 490 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
.++.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 398 ~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 398 HVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred ccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 3478999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-89 Score=721.70 Aligned_cols=424 Identities=31% Similarity=0.475 Sum_probs=398.2
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
+++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++|++.......+..
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999997 799999999999998766544322
Q ss_pred -c--CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 175 -~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
. +....+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++++++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 2 11123566789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
++++ +.+.+..|+.|+ ++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.++||
T Consensus 161 ~v~g-~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ 238 (433)
T cd07134 161 VFEG-DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQ 238 (433)
T ss_pred EEeC-ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCC
Confidence 9998 567889999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~ 410 (530)
.|++++++|||++++|+|+++|+++++.++.|+| .+.++++||++++.+.+++.+++++++.+|+++++||... .+++
T Consensus 239 ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~ 317 (433)
T cd07134 239 TCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQR 317 (433)
T ss_pred cccCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCC
Confidence 9999999999999999999999999999988887 8899999999999999999999999999999999999764 3468
Q ss_pred eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC
Q 009618 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 490 (530)
Q Consensus 411 ~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~ 490 (530)
|++|||+.+++++|++++||+||||++|++|+|+||+|+++|+++|||+++|||+|.++++++++++++|+||||+....
T Consensus 318 ~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~ 397 (433)
T cd07134 318 YIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLH 397 (433)
T ss_pred EEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred --CCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 491 --TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 491 --~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
.+.+||||+|+||+|+++|++++++||+.|+|.
T Consensus 398 ~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 398 FLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred cCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 467999999999999999999999999999885
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-88 Score=714.32 Aligned_cols=421 Identities=31% Similarity=0.470 Sum_probs=389.7
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.++|+++.++...+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5789999999999999999999999999999999999999999999999999996 699999999999998887765433
Q ss_pred cCCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 175 IPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 175 ~~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
.+.. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 2211 12345788999999999999999999999999999999999999999999999999999999986 9999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
++++++ +.+..|+. ++|+.|+||||+++|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||
T Consensus 161 vv~g~~-~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ 238 (443)
T cd07132 161 VVLGGV-EETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQ 238 (443)
T ss_pred EEeCCH-HHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 999854 44566775 5899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~ 411 (530)
.|++++|||||++++|+|+++|.+++++++.|+| ++++++||++++.+++++.+++++ +++++||... .+++|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~ 311 (443)
T cd07132 239 TCIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERY 311 (443)
T ss_pred ceeCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCE
Confidence 9999999999999999999999999999999988 789999999999999999999863 5899999764 35789
Q ss_pred EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-
Q 009618 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS- 490 (530)
Q Consensus 412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~- 490 (530)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||++...
T Consensus 312 ~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~~~ 391 (443)
T cd07132 312 IAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHY 391 (443)
T ss_pred EeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred -CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 491 -TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 491 -~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
.+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 392 TLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 367999999999999999999999999999998763
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-86 Score=702.24 Aligned_cols=418 Identities=34% Similarity=0.532 Sum_probs=387.2
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
.++++|++||+.|+.++..+|+++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++....+..+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 3889999999999999999999999999999999999999999999999987775 599999999999998877654432
Q ss_pred -c--CCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEE
Q 009618 175 -I--PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVN 251 (530)
Q Consensus 175 -~--~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~ 251 (530)
. +....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++++ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 1 1112345678899999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred eecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCC
Q 009618 252 VVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331 (530)
Q Consensus 252 ~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ 331 (530)
+++++ .+.+..|+.|+ ++.|+||||+++|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.++||
T Consensus 161 vv~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ 238 (426)
T cd07087 161 VVEGG-VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQ 238 (426)
T ss_pred EEeCC-chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCC
Confidence 99984 46688999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCce
Q 009618 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTF 411 (530)
Q Consensus 332 ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~ 411 (530)
.|+++++||||++++|+|+++|.+.+++++.|+| ++++++||++++.+.+++.++++++ ++++||... .+|+|
T Consensus 239 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~-~~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~ 311 (426)
T cd07087 239 TCIAPDYVLVHESIKDELIEELKKAIKEFYGEDP-KESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERY 311 (426)
T ss_pred ccccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCC-ccCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCE
Confidence 9999999999999999999999999999986666 5789999999999999999999754 899998764 35789
Q ss_pred EeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--
Q 009618 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-- 489 (530)
Q Consensus 412 ~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-- 489 (530)
++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++.++++++++|+||||+...
T Consensus 312 ~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~ 391 (426)
T cd07087 312 IAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLLHA 391 (426)
T ss_pred EeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 490 STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 490 ~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
..+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 392 ~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 392 AIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 3468999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=666.03 Aligned_cols=478 Identities=29% Similarity=0.437 Sum_probs=434.1
Q ss_pred Cccccccccccccccchhhhcc------CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHH
Q 009618 29 TPAFSRQMSVGMKSVTDRLRDS------GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSA 101 (530)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A 101 (530)
.|.++.+++++..+....++.. ..|+....++|+-+. .|+..+++||.+ .+++++|..++.+|+++|++.|
T Consensus 82 ~R~NSaG~Dlsne~~la~L~~al~~~a~~~w~A~p~~~~~~~~--~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A 159 (769)
T COG4230 82 GRVNSAGLDLSNEHRLASLSSALLASAGQKWQAAPIVNGAPVA--GGEPRPVINPADPDDIVGTVTEATEADVEQALEAA 159 (769)
T ss_pred ccccccccCcchHHHHHHHHHHHHhhhhhhhccccccCCCcCC--CCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHH
Confidence 4667777777665544444321 346677889888766 488899999999 5678999999999999999999
Q ss_pred HHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC
Q 009618 102 FDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD 181 (530)
Q Consensus 102 ~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g 181 (530)
.+|++.|..+|+.+|+.+|++++++|+.+..+|..++++|.||++.++..||.++++||+||+.++++-.++
T Consensus 160 ~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~-------- 231 (769)
T COG4230 160 VAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN-------- 231 (769)
T ss_pred HhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc--------
Confidence 999999999999999999999999999999999999999999999999999999999999999998763332
Q ss_pred ceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHH
Q 009618 182 RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIG 261 (530)
Q Consensus 182 ~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~ 261 (530)
..++|+|+|+||+|||||+.++..+++.||++||+|+.||+++||+.+..-+++++++|+|++++++++|+|+.+|
T Consensus 232 ----~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvG 307 (769)
T COG4230 232 ----LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVG 307 (769)
T ss_pred ----cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccc
Confidence 3457999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhcCCCceEEEeeCCHHHHHHHHHHHhc---ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCe
Q 009618 262 DALLTSPQVRKITFTGSTAVGKKLMAGAAG---TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR 338 (530)
Q Consensus 262 ~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~---~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~ 338 (530)
..|+.++++++|+||||+++++.|.++.++ ...|++.|+||.|+|||+.+|--++++.+++.|+|.++||+|++.+.
T Consensus 308 a~L~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRv 387 (769)
T COG4230 308 AALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRV 387 (769)
T ss_pred hhhhcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhh
Confidence 999999999999999999999999999887 35789999999999999999999999999999999999999999999
Q ss_pred EEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEe
Q 009618 339 VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVL 417 (530)
Q Consensus 339 v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl 417 (530)
+|+++++.|..+++|+..+.++++|+|....|++||+|+.+..+.++++|+..+..|-++..-....+ ..|.|+.||++
T Consensus 388 LclQ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~ 467 (769)
T COG4230 388 LCLQEDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLI 467 (769)
T ss_pred hhhhhhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeE
Confidence 99999999999999999999999999999999999999999999999999987777655433222221 25899999999
Q ss_pred cCCCCCCcccccccccceEEEEEeC--CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCC--C
Q 009618 418 SNVKSEMLVSREEVFGPVAPLLCFK--TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE--V 493 (530)
Q Consensus 418 ~~~~~~~~~~~eE~FGPv~~i~~~~--~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~--~ 493 (530)
+. ++..-++.|+||||++|++|+ ++|++|+.+|.++||||.+|||+..+.+.++.+++++|++|||+..++.. .
T Consensus 468 El--~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGV 545 (769)
T COG4230 468 EL--ENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGV 545 (769)
T ss_pred Ec--CCHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEee
Confidence 86 455567899999999999998 67999999999999999999999999999999999999999999988664 7
Q ss_pred CcccCCCCCCCCCC-ChHHHHHhhheeeEE
Q 009618 494 APFGGVKQSGLGRE-GSKYGMDEFLEIKYV 522 (530)
Q Consensus 494 ~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v 522 (530)
+||||.+.||+|.+ ||+.+|..|+..+..
T Consensus 546 QPFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 546 QPFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred ccCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 99999999999999 999999999987754
|
|
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-84 Score=686.66 Aligned_cols=419 Identities=26% Similarity=0.343 Sum_probs=380.3
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY-- 171 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~-- 171 (530)
+++|++.|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++|++..+++..
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 468999999999999999999999999999999999999999999999999999999999999999999998876432
Q ss_pred CcccCCC------CCCceeEEEEeeceEEEEECCCCcchHH--HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH---
Q 009618 172 GEIIPAT------LPDRRLFVLKQPVGVAGAITPWNFPLAM--ITRKVGPALACGCTVVVKPSEFTPLTALAAAELA--- 240 (530)
Q Consensus 172 g~~~~~~------~~g~~~~~~~~P~GVv~~i~p~n~P~~~--~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l--- 240 (530)
+...+.. .++...+.+++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|+++..+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2222111 1133457889999999999999999987 5589999999999999999999999999888776
Q ss_pred -HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc--ccceEEeecCCCccEEEecCC---CH
Q 009618 241 -LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG--TVKKVSLELGGNAPCIVFDDA---DL 314 (530)
Q Consensus 241 -~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~--~~~~~~lelgG~~~~iV~~dA---D~ 314 (530)
.++|+|+|++|+|++++.+.++.|++|++|++|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|| |+
T Consensus 161 l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl 240 (454)
T cd07129 161 LRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERG 240 (454)
T ss_pred HHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHH
Confidence 589999999999999777789999999999999999999999999999988 699999999999999999999 89
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 315 ~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
|.|++.+++++|.|+||.|++++|||||++ ++|+|+++|.++++++++ ||++++.+.++..+.++++++
T Consensus 241 ~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~ 310 (454)
T cd07129 241 EAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAA 310 (454)
T ss_pred HHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 999999999999999976 477788888888899999999
Q ss_pred C-CCeEeeCCcccCCCCceEeceEecCCC---CCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC--H
Q 009618 394 K-GAKVLLGGRRHSLGMTFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN--L 467 (530)
Q Consensus 394 ~-Ga~vl~gg~~~~~~~~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d--~ 467 (530)
+ |+++++||... .+++|++|||+...+ ++|++++||+||||++|++|+|.||+|+++|+++|||++||||+| .
T Consensus 311 ~~ga~~l~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~ 389 (454)
T cd07129 311 APGVRVLAGGAAA-EGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDL 389 (454)
T ss_pred cCCcEEEeCCCcC-CCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchH
Confidence 8 99999999764 357999999998665 689999999999999999999999999999999999999999999 8
Q ss_pred HHHHHHHhhc--cceEEEECCCCCCC---CCCcccC-CCCCCCCCC--ChHHHHHhhheeeEEEEe
Q 009618 468 QRTWRVSEAL--EYGLVGVNEGLIST---EVAPFGG-VKQSGLGRE--GSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 468 ~~~~~~a~~l--~~G~v~vN~~~~~~---~~~pfGG-~~~SG~G~~--~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++++| ++|+||||++.... +.+|||| +|.||+|++ +|.+++++||++ ||+.
T Consensus 390 ~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~--~~~~ 453 (454)
T cd07129 390 ALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP--VCYQ 453 (454)
T ss_pred HHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc--cccC
Confidence 9999999999 69999999876543 4899999 999999999 789999999986 4543
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-82 Score=679.38 Aligned_cols=429 Identities=24% Similarity=0.296 Sum_probs=378.7
Q ss_pred ecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH---
Q 009618 75 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG--- 151 (530)
Q Consensus 75 ~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~--- 151 (530)
+||+|++++++++.++. +.++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.+++.
T Consensus 70 ~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gk 146 (551)
T TIGR02288 70 RSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGG 146 (551)
T ss_pred cCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccC
Confidence 89999999999999986 899999999999999999999999999999999999999999999999999999864
Q ss_pred --HHHHHHHHHHHHHHHHHHHhCccc---CCCCCCc---eeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEe
Q 009618 152 --EVDYGAKFIEFYAEEAKRVYGEII---PATLPDR---RLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223 (530)
Q Consensus 152 --Ev~~~~~~l~~~a~~~~~~~g~~~---~~~~~g~---~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 223 (530)
++.+.++.++|++....++.+... +....+. .....++|+|||++|+|||||+++.++++++||++||+||+
T Consensus 147 p~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVl 226 (551)
T TIGR02288 147 PHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLV 226 (551)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEE
Confidence 788899999999999888766543 2211111 12347899999999999999999999999999999999999
Q ss_pred ecCCCcHHHHH----HHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEe
Q 009618 224 KPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSL 298 (530)
Q Consensus 224 Kps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~l 298 (530)
|||+.+|+++. .+.+++.++|+|+|++|++++. +.++++.|+.||+|++|.||||+++|+.|++.++ .+++++
T Consensus 227 KPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~~v~l 304 (551)
T TIGR02288 227 KPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QAQVYT 304 (551)
T ss_pred ECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cCcEEe
Confidence 99999999665 5679999999999999999985 6788999999999999999999999999998876 479999
Q ss_pred ecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHhhccccCCCCCCC
Q 009618 299 ELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 299 elgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
|+|||||+||++|||+|.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++ +|+|.++.
T Consensus 305 ElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~ 383 (551)
T TIGR02288 305 EKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARAT 383 (551)
T ss_pred ecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccccc
Confidence 9999999999999999999999999999999999999999999999 7999999999999999 99999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
+++||++++.+++++ +++++.| ++++||.... .+++|++|||+....++|++++||+||||++|++|+|+|
T Consensus 384 ~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~d 458 (551)
T TIGR02288 384 AVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGA 458 (551)
T ss_pred ccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHH
Confidence 999999999999996 5666778 6666665421 233688999996544599999999999999999999999
Q ss_pred HHHHHHHcC--CCC-cEEEEEcCCHHHHHHHHhhc----------cceEEEECCCCCCCCCCcccCCCCCCCCCC-ChHH
Q 009618 446 EAIHMANDT--NAG-LAAYIFTNNLQRTWRVSEAL----------EYGLVGVNEGLISTEVAPFGGVKQSGLGRE-GSKY 511 (530)
Q Consensus 446 eai~~~n~~--~~g-L~a~v~s~d~~~~~~~a~~l----------~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~-~g~~ 511 (530)
|||+++|++ +|| |+++|||+|.+++.++.+++ ++|.|+||. ..||++.+.||.... +..+
T Consensus 459 eAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~------~~~~~~~~~sg~n~~a~~~~ 532 (551)
T TIGR02288 459 HAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ------SAAFSDFHGTGGNPAANASL 532 (551)
T ss_pred HHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc------CCCCCCCCCCCCCCccCCcc
Confidence 999999998 566 99999999999999999999 667777765 346888888888776 4445
Q ss_pred HHHhhheee
Q 009618 512 GMDEFLEIK 520 (530)
Q Consensus 512 ~l~~~~~~k 520 (530)
.--.|...+
T Consensus 533 ~~~~~~~~r 541 (551)
T TIGR02288 533 SDGAFVANR 541 (551)
T ss_pred cchhhhhcc
Confidence 555565544
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-82 Score=670.01 Aligned_cols=429 Identities=52% Similarity=0.835 Sum_probs=408.0
Q ss_pred HHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Q 009618 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI 174 (530)
Q Consensus 95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~ 174 (530)
+++++.|++|++.|+.++.++|.++|+++++.|.+++++|++++++|+||+..+++.|+..+++.+++++...+.+.+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999998887766554
Q ss_pred cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (530)
Q Consensus 175 ~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 254 (530)
.+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 33223467788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccc
Q 009618 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334 (530)
Q Consensus 255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~ 334 (530)
+++.+.+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||+|++||++|+|++.+++.+++++|.++||.|+
T Consensus 161 ~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~ 240 (432)
T cd07078 161 GDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCT 240 (432)
T ss_pred cCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCcc
Confidence 87666889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceEe
Q 009618 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYE 413 (530)
Q Consensus 335 a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~~~~~~ 413 (530)
++++||||++++|+|+++|.++++++++|+|+|+++++||++++.+++++.++++++.++|+++++||..... +|+|++
T Consensus 241 a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~ 320 (432)
T cd07078 241 AASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVP 320 (432)
T ss_pred CCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876532 479999
Q ss_pred ceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CC
Q 009618 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TE 492 (530)
Q Consensus 414 Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~ 492 (530)
|||+.++++++++++||+||||++|++|+|+||+|+++|+.++||+++|||+|.+.++++++++++|+|+||+.... .+
T Consensus 321 Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 400 (432)
T cd07078 321 PTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEP 400 (432)
T ss_pred cEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876 78
Q ss_pred CCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 493 ~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
.+||||+|.||+|+++|++|+++|++.|+|+
T Consensus 401 ~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 401 SAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 8999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=672.37 Aligned_cols=415 Identities=19% Similarity=0.204 Sum_probs=375.8
Q ss_pred HHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh--C
Q 009618 95 KDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVY--G 172 (530)
Q Consensus 95 ~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~--g 172 (530)
+.|++.|++||+.|+.++..+|+++|+++++.|++++++|++++++|+|||. ++..|+..+++.++||+..+.... +
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 5789999999999999999999999999999999999999999999999999 777899999999999998886531 1
Q ss_pred cccC--CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCC-CCcc
Q 009618 173 EIIP--ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGI-PPGV 249 (530)
Q Consensus 173 ~~~~--~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGl-P~gv 249 (530)
.... ....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.++++++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 1111 111134678899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC-CHHHHHHHHHHHHhhc
Q 009618 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA-DLNVAVNGALAAKFRN 328 (530)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA-D~~~a~~~i~~s~f~~ 328 (530)
++++++++. .+..|+.|++++.|+||||+++|+.|++.++. +|+++|+|||||+||++|| |+|.+++.+++++|.|
T Consensus 161 ~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~ 237 (442)
T cd07084 161 VTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTAC 237 (442)
T ss_pred eEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcc
Confidence 999999665 88999999999999999999999999998874 8999999999999999999 6999999999999999
Q ss_pred cCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC-CCeEeeCCcccC
Q 009618 329 SGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK-GAKVLLGGRRHS 406 (530)
Q Consensus 329 ~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~-Ga~vl~gg~~~~ 406 (530)
+||.|++++|+|||++ ++|+|+++|.++++++++| ++++||++++ ++.++++++..+ |+++++||....
T Consensus 238 ~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 238 SGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred cCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccc
Confidence 9999999999999999 9999999999999999998 7889999775 455666777777 599999997531
Q ss_pred ------CCCceEeceEecCCCCCC---cccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHh
Q 009618 407 ------LGMTFYEPTVLSNVKSEM---LVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSE 475 (530)
Q Consensus 407 ------~~~~~~~Ptvl~~~~~~~---~~~~eE~FGPv~~i~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~ 475 (530)
..|+|++|||+.+++++| ++++||+||||++|++|+| ++|+|+++|+++|||++||||+|.++++++++
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~ 388 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIG 388 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHH
Confidence 137899999999999997 9999999999999999999 99999999999999999999999999999999
Q ss_pred hc-cceEEEECCC-CC-CCCCCcccC-CCCCCCCCCC-hHHHHHhhheeeEE
Q 009618 476 AL-EYGLVGVNEG-LI-STEVAPFGG-VKQSGLGREG-SKYGMDEFLEIKYV 522 (530)
Q Consensus 476 ~l-~~G~v~vN~~-~~-~~~~~pfGG-~~~SG~G~~~-g~~~l~~~~~~k~v 522 (530)
++ ++|+||||+. .. ..+..|||| .|.||+|+++ |.+++++||+...+
T Consensus 389 ~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 389 NLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 99 9999999976 33 445577776 8899999995 99999999987643
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-83 Score=616.81 Aligned_cols=458 Identities=30% Similarity=0.500 Sum_probs=427.3
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (530)
Q Consensus 68 ~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (530)
+.++++.+.|.||+.++.++..++.|+++.+..|++|++.|.+.+...|.+.|+.+.+.+-+|+|.+++..++++||+.-
T Consensus 62 ~~~~vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmv 141 (583)
T KOG2454|consen 62 SDKKVQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMV 141 (583)
T ss_pred CCCceEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhCcccCCC---CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEe
Q 009618 148 EA-VGEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223 (530)
Q Consensus 148 ~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 223 (530)
+| .+||..+.+.+.|...+.++...+..... .--...++.++|+||++.|.|||||+.+.+..+.+||.+||++|+
T Consensus 142 DAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVv 221 (583)
T KOG2454|consen 142 DASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVV 221 (583)
T ss_pred hhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEE
Confidence 77 58999999999998888777654432111 012346789999999999999999999999999999999999999
Q ss_pred ecCCCcHHHHHHHH----HHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEee
Q 009618 224 KPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE 299 (530)
Q Consensus 224 Kps~~~~~~~~~l~----~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~le 299 (530)
|.|+.+.++..... .+|+..|-|+++++++++ -++.+++|.+|+.|+.+.|.||..+++.|++.++++++|+.+|
T Consensus 222 K~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc-lpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lE 300 (583)
T KOG2454|consen 222 KVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITC-LPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLE 300 (583)
T ss_pred EeecceeeehhhHHHHHHHHHHHcCCCcchhheeec-CcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEe
Confidence 99999998876544 456777999999999998 5688999999999999999999999999999999999999999
Q ss_pred cCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHH
Q 009618 300 LGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKA 379 (530)
Q Consensus 300 lgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~ 379 (530)
||||+++||++|||++..+.-++++.|..+||.|...+|++||.++||.|+..|..+++.++.|.|+...++||.|++.+
T Consensus 301 LGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~n 380 (583)
T KOG2454|consen 301 LGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQN 380 (583)
T ss_pred ecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC
Q 009618 380 ALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 455 (530)
Q Consensus 380 ~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~ 455 (530)
+++.++.++++|+.+||+++.||.+.. +-|.|++||++.+++++|.+++||.||||++|+++++.|++|+++|+++
T Consensus 381 rfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~ 460 (583)
T KOG2454|consen 381 RFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSR 460 (583)
T ss_pred chHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCc
Confidence 999999999999999999999999754 3579999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 456 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 456 ~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|||.++||+.|..+..+++++|++|+|.||+-.. ..-.+||||+|.||+||.+|.+||+..++.|+|++..
T Consensus 461 fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd~ 532 (583)
T KOG2454|consen 461 FGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYDR 532 (583)
T ss_pred ccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceeccc
Confidence 9999999999999999999999999999999654 4457999999999999999999999999999997763
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=666.33 Aligned_cols=446 Identities=22% Similarity=0.252 Sum_probs=392.3
Q ss_pred CCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Q 009618 67 YDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL 146 (530)
Q Consensus 67 ~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~ 146 (530)
.+++..+++||.|++++++++.+ |++.++++|++|++.|+.+++.+|.++|++++++|++++++|++++++|+||++
T Consensus 62 ~~~~~~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~ 138 (549)
T cd07127 62 ASGWVGGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAF 138 (549)
T ss_pred CCCCeeeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCH
Confidence 35788999999999999999987 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-----HHHHHHHHHHHHHHHHHHHhCcccCCCCCC------ceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 147 KEAVG-----EVDYGAKFIEFYAEEAKRVYGEIIPATLPD------RRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 147 ~~a~~-----Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g------~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
.++.. |++.+++.++|++++..+..+...+....+ ......++|+||+++|+|||||+++.+.++++||
T Consensus 139 ~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~AL 218 (549)
T cd07127 139 MMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASL 218 (549)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHH
Confidence 88863 899999999999998877665432111011 1123478999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHH----HHHHHHHHcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 216 ACGCTVVVKPSEFTPLTAL----AAAELALQAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
++||+||+|||+.+|+++. .+.++|.++|+|+|++|+++++ +.++++.|+.||+|+.|.||||+.+|+.|++.++
T Consensus 219 aaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~ 298 (549)
T cd07127 219 ATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR 298 (549)
T ss_pred hcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc
Confidence 9999999999999998764 5668999999999999999975 4678999999999999999999999999999887
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh---------hHHHHHHHHHHHhhccc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG---------IYEKFADAFSKAVKNLK 361 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~---------i~d~f~~~l~~~~~~~~ 361 (530)
.+++++|+|||||+||++|||++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++
T Consensus 299 --~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l- 375 (549)
T cd07127 299 --QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL- 375 (549)
T ss_pred --cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-
Confidence 4799999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred cCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEE
Q 009618 362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAP 437 (530)
Q Consensus 362 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~ 437 (530)
+|+|.+..+++||++++++++++++ +++.|+ +++||.... .+++|++|||+..++++|.+++||+||||++
T Consensus 376 ~Gdp~~~~~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~ 450 (549)
T cd07127 376 LADPARAAALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAF 450 (549)
T ss_pred cCCccccccccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEE
Confidence 9999999999999999999999864 455665 778876532 2334669999998889999999999999999
Q ss_pred EEEeCCHHHHHHHHHcCC--C-CcEEEEEcCCHHHHHHHHhh-ccce-EEEECCCCCCCCCC--cccCCCCCCCCCC-Ch
Q 009618 438 LLCFKTEEEAIHMANDTN--A-GLAAYIFTNNLQRTWRVSEA-LEYG-LVGVNEGLISTEVA--PFGGVKQSGLGRE-GS 509 (530)
Q Consensus 438 i~~~~~~~eai~~~n~~~--~-gL~a~v~s~d~~~~~~~a~~-l~~G-~v~vN~~~~~~~~~--pfGG~~~SG~G~~-~g 509 (530)
|++|+|.||+|+++|++. + ||+++|||+|.+.++++.++ .++| +++||.....-..+ ||||.+.||.... ++
T Consensus 451 V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~ 530 (549)
T cd07127 451 VVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANA 530 (549)
T ss_pred EEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCccccc
Confidence 999999999999999984 4 69999999999999999998 4555 99999433222334 5999999999988 66
Q ss_pred HHHHHhhheeeEEE
Q 009618 510 KYGMDEFLEIKYVC 523 (530)
Q Consensus 510 ~~~l~~~~~~k~v~ 523 (530)
.+..-.|...+--+
T Consensus 531 ~~~~~~fv~~r~~~ 544 (549)
T cd07127 531 ALTDGAFVANRFRV 544 (549)
T ss_pred ccchhhhhhcceEE
Confidence 67777777665433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-82 Score=626.31 Aligned_cols=450 Identities=36% Similarity=0.602 Sum_probs=421.5
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHh--hhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~--w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.+.||+|+|+.++++++++.+||.|+++|++++.++..|+++|+++|+.||+. |++++..+|.+.+.++++++++|++
T Consensus 422 h~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~e 501 (881)
T KOG2452|consen 422 HQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQE 501 (881)
T ss_pred HhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccc
Confidence 45699999999999999999999999999999999999999999999999984 9999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCC---CceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLP---DRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~---g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
+|+.+.+++.|.-+.-|. .-+...++.++||+++..++.|.++|.... .+-..+.++|+|||++|+|||||+.++.
T Consensus 502 elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmls 581 (881)
T KOG2452|consen 502 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLS 581 (881)
T ss_pred hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHH
Confidence 999999999998777664 467778999999999999999998886542 3456789999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
|+.+++|++- ..++.+- .|++|+++|.+.-+|..|..||+|++|-||||+++|+.||+.
T Consensus 582 wk~aaclaa~-----------------~~k~~e~----sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~s 640 (881)
T KOG2452|consen 582 WKTAACLAAQ-----------------VLKFAEL----TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 640 (881)
T ss_pred HHHHHHHHHH-----------------Hhhhhhh----cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHH
Confidence 9999998531 1222222 389999999998999999999999999999999999999999
Q ss_pred Hhc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 289 AAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 289 ~a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
++. ++|++++||||++|+|++.|||+++|+.....+.|++-|..|++..|+||..+|.|+|+.++.++++++++|+|+|
T Consensus 641 ca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig~pld 720 (881)
T KOG2452|consen 641 CAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVGNPLD 720 (881)
T ss_pred HhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccCCccc
Confidence 985 6899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC--CHH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK--TEE 445 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~--~~~ 445 (530)
.+|+.||.-...+..++.++++.+++.||++.+||++.+..|.|++|||++++++.|.+.+||-||||+.|.+|+ |.|
T Consensus 721 r~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~ 800 (881)
T KOG2452|consen 721 RDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLD 800 (881)
T ss_pred ccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHH
Confidence 999999999999999999999999999999999999887668999999999999999999999999999999998 568
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++++.+|++++||+++|||+|..++.++++.|++|+|+||++.-.+...||||+|+||+|...|.++|.+|...|+|++.
T Consensus 801 ~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~~ktit~e 880 (881)
T KOG2452|consen 801 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTVTFE 880 (881)
T ss_pred HHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhheeeEEEEee
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999874
|
|
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-81 Score=654.37 Aligned_cols=399 Identities=22% Similarity=0.246 Sum_probs=351.6
Q ss_pred HHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009618 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170 (530)
Q Consensus 91 ~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~ 170 (530)
-+|++.++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. ++.++|+++..
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~--- 73 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKT--- 73 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhc---
Confidence 368999999999999999999999999999999999999999999999999999997763 44566665422
Q ss_pred hCcc-c-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH----HH
Q 009618 171 YGEI-I-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQ 242 (530)
Q Consensus 171 ~g~~-~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~ 242 (530)
.+.. . +. ..++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~ 153 (429)
T cd07121 74 PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAE 153 (429)
T ss_pred CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHH
Confidence 1211 1 11 112234578889999999999999999999999999999999999999999999999999877 47
Q ss_pred cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHH
Q 009618 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 322 (530)
Q Consensus 243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~ 322 (530)
+|+|+|++|++++++.+.++.|++||+|++|+||||+.+|+.|++. .||+++|+|||||+||++|||+|.|++.++
T Consensus 154 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~ 229 (429)
T cd07121 154 AGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIV 229 (429)
T ss_pred cCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHH
Confidence 8999999999998777889999999999999999999999999875 489999999999999999999999999999
Q ss_pred HHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC--CCeEee
Q 009618 323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK--GAKVLL 400 (530)
Q Consensus 323 ~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~--Ga~vl~ 400 (530)
+++|.|+||.|++.+|+|||+++||+|+++|+++ . .++++..+.+++.++++++.+. |+++++
T Consensus 230 ~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~ 294 (429)
T cd07121 230 QGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWV 294 (429)
T ss_pred hcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCcccccccc
Confidence 9999999999999999999999999999999886 1 2478999999999999998864 799999
Q ss_pred CCccc---CCCCceEe---ceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHHHH
Q 009618 401 GGRRH---SLGMTFYE---PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWR 472 (530)
Q Consensus 401 gg~~~---~~~~~~~~---Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~~~ 472 (530)
||... ...|.|++ |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| +++|||+|.+++++
T Consensus 295 gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~ 374 (429)
T cd07121 295 GKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTK 374 (429)
T ss_pred CcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHH
Confidence 98641 11357776 599999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCC--CCCChHHHHHhhheeeEEE
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~--G~~~g~~~l~~~~~~k~v~ 523 (530)
+++++++|+||||++.. +.+||||+|.|++ |.+-| +|+ +..|+++
T Consensus 375 ~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~-~~~---~~~~~~~ 421 (429)
T cd07121 375 MARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTG-EGL---TSARTFT 421 (429)
T ss_pred HHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcC-cCc---cChhhhh
Confidence 99999999999998754 6789999999999 55533 444 5555543
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-79 Score=644.69 Aligned_cols=408 Identities=18% Similarity=0.218 Sum_probs=352.3
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHh
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK--FIEFYAEEAKRVY 171 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~--~l~~~a~~~~~~~ 171 (530)
++.|+++|++||+.|+.+|+.+|.++|+++++.|++|+++|++++++|+|||+.+++.++..++. ..++++.. ..
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~~---~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKDE---KT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcc---cc
Confidence 46899999999999999999999999999999999999999999999999999999877665544 23443322 12
Q ss_pred CcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH----HcCCCC
Q 009618 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPP 247 (530)
Q Consensus 172 g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~ 247 (530)
+...+.. .+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++. ++|+|+
T Consensus 78 ~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTGD-ENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecCC-CCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 2222321 13446889999999999999999999999999999999999999999999999988888775 789999
Q ss_pred ccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhh
Q 009618 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 327 (530)
Q Consensus 248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~ 327 (530)
|++|+|++.+.+.++.|+.||+|++|+||||++ +++.+++++||+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~ 232 (439)
T cd07081 157 NLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTF 232 (439)
T ss_pred hhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhc
Confidence 999999987778899999999999999999998 4666778899999999999999999999999999999999999
Q ss_pred ccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-C
Q 009618 328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-S 406 (530)
Q Consensus 328 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~ 406 (530)
|+||.|++.+|+|||+++||+|+++|.+++ ||+++.++.+++.++++++..+|++++.|+... .
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~ 297 (439)
T cd07081 233 DNGVICASEQSVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIA 297 (439)
T ss_pred CCCCCCCCCCEEEEcHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHH
Confidence 999999999999999999999999999873 899999999999999999999999875443211 1
Q ss_pred -CCCceEece---EecCCC--CCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEcCC---HHHHHHH
Q 009618 407 -LGMTFYEPT---VLSNVK--SEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNN---LQRTWRV 473 (530)
Q Consensus 407 -~~~~~~~Pt---vl~~~~--~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~----~~gL~a~v~s~d---~~~~~~~ 473 (530)
..|+|++|| ++.+++ ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++
T Consensus 298 ~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~ 377 (439)
T cd07081 298 AAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQF 377 (439)
T ss_pred HHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHH
Confidence 246899998 998888 999999999999999999999999999999975 799999999999 9999999
Q ss_pred HhhccceEEEECCCC-CCC--CCCcccCCCCCCCC--CCChH-----HHHHhhheeeEEEE
Q 009618 474 SEALEYGLVGVNEGL-IST--EVAPFGGVKQSGLG--REGSK-----YGMDEFLEIKYVCL 524 (530)
Q Consensus 474 a~~l~~G~v~vN~~~-~~~--~~~pfGG~~~SG~G--~~~g~-----~~l~~~~~~k~v~~ 524 (530)
++++++|+||||.+. ... ...-|||++.+-+| ..||. -+..+|++.|.|.+
T Consensus 378 a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 378 ANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 999999999999766 332 24567777654332 22221 25788999988764
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=643.52 Aligned_cols=407 Identities=21% Similarity=0.223 Sum_probs=356.7
Q ss_pred CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Q 009618 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167 (530)
Q Consensus 88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~ 167 (530)
....+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.+++. ..++++++..
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence 3578999999999999999999999999999999999999999999999999999999988753 3345555443
Q ss_pred HH---HhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH---
Q 009618 168 KR---VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL--- 241 (530)
Q Consensus 168 ~~---~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~--- 241 (530)
.. ..+... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 21 111111 1123456788899999999999999999999999999999999999999999999999998876
Q ss_pred -HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHH
Q 009618 242 -QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNG 320 (530)
Q Consensus 242 -~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~ 320 (530)
++|+|+|++|++++.+.+.++.|++||+|++|+||||+++|+.|++ ..||+++|+|||||+||++|||+|.|++.
T Consensus 184 ~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~Aa~~ 259 (465)
T PRK15398 184 VAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKAARD 259 (465)
T ss_pred HHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHHHHH
Confidence 6999999999999866778899999999999999999999999998 36899999999999999999999999999
Q ss_pred HHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEee
Q 009618 321 ALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 400 (530)
Q Consensus 321 i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~ 400 (530)
+++++|.|+||.|++++|||||+++||+|+++|+++. +|++++.+++++.++++++..++++++.
T Consensus 260 i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~ 324 (465)
T PRK15398 260 IVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWV 324 (465)
T ss_pred HHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhh
Confidence 9999999999999999999999999999999999861 3789999999999999865445667787
Q ss_pred CCccc---CCCCceE---eceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc--EEEEEcCCHHHHHH
Q 009618 401 GGRRH---SLGMTFY---EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL--AAYIFTNNLQRTWR 472 (530)
Q Consensus 401 gg~~~---~~~~~~~---~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL--~a~v~s~d~~~~~~ 472 (530)
||... ...|.|+ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++
T Consensus 325 g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~ 404 (465)
T PRK15398 325 GKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNK 404 (465)
T ss_pred CCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHH
Confidence 76431 1124555 4899999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++|+||||++.. +.+||||+|.|.+-- +|+.| ...|..|+++.+
T Consensus 405 ~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~~~ 453 (465)
T PRK15398 405 MARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFTRR 453 (465)
T ss_pred HHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhhhh
Confidence 99999999999998753 678999999998632 47777 888888887654
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=635.29 Aligned_cols=382 Identities=20% Similarity=0.224 Sum_probs=339.3
Q ss_pred HHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHH
Q 009618 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EA--------VGEVDYGAKFIEFY 163 (530)
Q Consensus 96 ~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~Ev~~~~~~l~~~ 163 (530)
..+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+.. ++ ..|++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999777666643 33 35999999999999
Q ss_pred HHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH
Q 009618 164 AEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL 241 (530)
Q Consensus 164 a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~ 241 (530)
+...+ ..|...+.. ..+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 82 a~~~~-~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPD-PVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCC-CCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 87654 334333321 1234568899999999999996 56 6788999999999999999999999999999998886
Q ss_pred ----HcCCCCccEEeecCCch-hHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHH
Q 009618 242 ----QAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNV 316 (530)
Q Consensus 242 ----~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~ 316 (530)
++|+|+|++|++++.+. +.++.|+.||+|++|+||||+++|+.|++.+ ++|+++|||||||+||++|||+|.
T Consensus 159 ~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~~ 235 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLEM 235 (406)
T ss_pred HHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHHH
Confidence 89999999999998544 6788899999999999999999999999876 699999999999999999999999
Q ss_pred HHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCC
Q 009618 317 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 396 (530)
Q Consensus 317 a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga 396 (530)
|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ .|+
T Consensus 236 Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------~ga 280 (406)
T cd07079 236 AVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------AGV 280 (406)
T ss_pred HHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH----------------------------------CCC
Confidence 99999999999999 9999999999999999999999998765 256
Q ss_pred eEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh
Q 009618 397 KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 476 (530)
Q Consensus 397 ~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~ 476 (530)
+++.|+... .|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++++
T Consensus 281 ~~~~g~~~~----~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~ 352 (406)
T cd07079 281 ELRGDEETL----AILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLRE 352 (406)
T ss_pred EEecCHHHH----Hhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHh
Confidence 655332211 478888 779999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEECCCCCCCCCCcccCCCCCCC----CCCChHHHHHhhheeeEEEEec
Q 009618 477 LEYGLVGVNEGLISTEVAPFGGVKQSGL----GREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 477 l~~G~v~vN~~~~~~~~~pfGG~~~SG~----G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++|+||||++....+.+||||.|+||+ |+++|.+++++|++.|+|++++
T Consensus 353 ~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 353 VDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred CCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 9999999999877667789999999998 9999999999999999998874
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-78 Score=633.62 Aligned_cols=386 Identities=21% Similarity=0.240 Sum_probs=342.7
Q ss_pred HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHHH
Q 009618 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAKF 159 (530)
Q Consensus 92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~~ 159 (530)
+|++.++++|++||+.|+.+|..+|.++|+++++.|++|+++|++++++|+||+.. +++ .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999988877642 443 689999999
Q ss_pred HHHHHHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 237 (530)
++|++.++.. .+...+.. ..+...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++
T Consensus 84 ~~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~ 160 (417)
T PRK00197 84 LRQVAALPDP-VGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALV 160 (417)
T ss_pred HHHHhhcCCC-ccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHH
Confidence 9999977654 34433321 12346789999999999999986 4 678899999999999999999999999999988
Q ss_pred HHH----HHcCCCCccEEeecCCc-hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 238 ELA----LQAGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 238 ~~l----~~aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
+++ .++|+|+|++|+|++.+ .+.+..|..|++|++|+||||+.+|+.|++.+ +||+++|||||||+||++||
T Consensus 161 ~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~dA 237 (417)
T PRK00197 161 AVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDESA 237 (417)
T ss_pred HHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCC
Confidence 874 79999999999999644 45788888899999999999999999999865 69999999999999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|.+++++++++
T Consensus 238 dl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~----------------------------- 287 (417)
T PRK00197 238 DLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE----------------------------- 287 (417)
T ss_pred CHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe-----------------------------
Confidence 999999999999999999 99999999999999999999999999988642
Q ss_pred HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618 393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~ 472 (530)
++ |+... .+ |+ |||+ +++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++
T Consensus 288 -----~~-~~~~~--~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~ 354 (417)
T PRK00197 288 -----LR-GDEAA--LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAER 354 (417)
T ss_pred -----Ee-cCHHH--HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHH
Confidence 11 11110 01 33 9998 4689999999999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++++++|+||||++....+..||||.|+||+| |++|.+|+++|++.|+|++++
T Consensus 355 ~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 355 FLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 999999999999998776778999999999999 999999999999999998865
|
|
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-77 Score=583.68 Aligned_cols=423 Identities=31% Similarity=0.478 Sum_probs=385.5
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhC
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 172 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g 172 (530)
+++.++.+|.+|.+-+..+.+.|.++|+++...+++|.++|.+++..+.+|+..++. .|+...+..++++.........
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 455689999999999999999999999999999999999999999999999998885 5777777777777766655432
Q ss_pred ccc-CC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCcc
Q 009618 173 EII-PA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 249 (530)
Q Consensus 173 ~~~-~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gv 249 (530)
+.. +. ...-.+.+++.+|+|||++|+|||||+.+.+..+++||+|||+||+|||+.+|.++..|++++-+. ++.++
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 221 11 112356789999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhcc
Q 009618 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329 (530)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~ 329 (530)
+.+|.| +.+....|+.+ +.|.|.||||+.+|+.||.+++++++|++||||||+|++|++|+|++-+++.|+++++.|+
T Consensus 163 ~~VV~G-gv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~ 240 (477)
T KOG2456|consen 163 IRVVNG-GVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNS 240 (477)
T ss_pred EEEecC-CCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccC
Confidence 999999 44444567766 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC
Q 009618 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409 (530)
Q Consensus 330 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~ 409 (530)
||.|.+++.|+++.+++++++++++..++++ .|+-..++.+++.+|+..+++|+.+++++- .+++.||..+. ..
T Consensus 241 GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d 314 (477)
T KOG2456|consen 241 GQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YGENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SD 314 (477)
T ss_pred CCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hCCCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hh
Confidence 9999999999999999999999999999998 577778899999999999999999998742 78999998764 34
Q ss_pred ceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 009618 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 489 (530)
Q Consensus 410 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~ 489 (530)
.|++|||+.+++++.++|+||+||||++|+.+.+.||+|+.+|+-+-.|++|+||+|.....++.+++.+|.|.+|+..+
T Consensus 315 ~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~ 394 (477)
T KOG2456|consen 315 RYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIM 394 (477)
T ss_pred cccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred --CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 490 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 490 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
.-..+||||++.||+|+++|++|++.|+..|++..+
T Consensus 395 H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 395 HVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred EEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 346899999999999999999999999999998654
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-76 Score=654.20 Aligned_cols=382 Identities=20% Similarity=0.209 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHHcC--CCHHHH----HHHHHHHHHH
Q 009618 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI------TLEQG--KPLKEA----VGEVDYGAKF 159 (530)
Q Consensus 92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a----~~Ev~~~~~~ 159 (530)
+++++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++ ++|+| ||+.++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 888877 4699999999
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 237 (530)
++||++. .+..|...+. ...+...++.++|+|||++|+||| |+.+. +++++||++||+||+|||+.||+++..|+
T Consensus 374 ~~~~a~~-~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADM-EDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcC-ccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 9999987 4455554431 122444688999999999999999 99998 99999999999999999999999999999
Q ss_pred HHHHHcCCCCcc----EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCC
Q 009618 238 ELALQAGIPPGV----VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDAD 313 (530)
Q Consensus 238 ~~l~~aGlP~gv----v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD 313 (530)
++++++ +|+|+ +|+|++ +.+++..|+.||+|++|+||||+.. +++.++.++||+++|||||||+||++|||
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DAD 525 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSAD 525 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCC
Confidence 999999 99996 999997 5688999999999999999999964 45556667899999999999999999999
Q ss_pred HHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHH
Q 009618 314 LNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVS 393 (530)
Q Consensus 314 ~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~ 393 (530)
+|.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++++++++
T Consensus 526 ld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~------------------------G---------~~~~~i~~a~~ 571 (718)
T PLN02418 526 MDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN------------------------G---------GLNDLLVALRS 571 (718)
T ss_pred HHHHHHHHHHHhCCC-CCccccCcEEEEecccccc------------------------c---------cHHHHHHHHHH
Confidence 999999999999999 9999999999999999997 2 35889999999
Q ss_pred CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHH
Q 009618 394 KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473 (530)
Q Consensus 394 ~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~ 473 (530)
+||++ +||.... | ++. + ++|++++||+|||+++|.+|+|+||||+++|+++|||+++|||+|.+++.++
T Consensus 572 ~Ga~l-~Gg~~~~--g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~ 640 (718)
T PLN02418 572 AGVTL-YGGPRAS--K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIF 640 (718)
T ss_pred CCCEE-ECCcccc--C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHH
Confidence 99999 6875531 3 233 3 7899999999999999999999999999999999999999999999999999
Q ss_pred HhhccceEEEECCCCCCCCCCcccCCCCCCC--CCCC--hHHHHHhhheeeEEEEec
Q 009618 474 SEALEYGLVGVNEGLISTEVAPFGGVKQSGL--GREG--SKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 474 a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~--G~~~--g~~~l~~~~~~k~v~~~~ 526 (530)
++++++|+||||++....+..||||+|+||+ ||++ |++||++|++.|+|++++
T Consensus 641 a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 641 LRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred HHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 9999999999999877667789999999999 9885 999999999999998873
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-75 Score=623.90 Aligned_cols=414 Identities=18% Similarity=0.211 Sum_probs=363.8
Q ss_pred CCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHH
Q 009618 88 CMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEE 166 (530)
Q Consensus 88 ~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~ 166 (530)
..+.+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+.+. +...+...+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 3578899999999999999999999999999999999999999999999999999999988764 233455666555543
Q ss_pred HHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHH----HHHHHH
Q 009618 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA----AELALQ 242 (530)
Q Consensus 167 ~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l----~~~l~~ 242 (530)
.+. .|. ... ..+...+..++|+|||++|+|||||+.+..+++++||++||+||+|||+.+|.++..+ .+++++
T Consensus 84 ~~~-~G~-~~~-~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MKT-IGI-LSE-DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Ccc-cce-ecC-CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 322 232 111 2355678899999999999999999999999999999999999999999999999974 455689
Q ss_pred cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHH
Q 009618 243 AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGAL 322 (530)
Q Consensus 243 aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~ 322 (530)
+|+|+|++|++++.+.+.++.|+.|++|++|+||||+.+++. ++...||+++|+|||+|+||++|||+|.|++.++
T Consensus 161 aGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~----a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv 236 (488)
T TIGR02518 161 AGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKA----AYSSGTPAIGVGPGNGPAYIERTANVKKAVRDII 236 (488)
T ss_pred cCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHH----HHHcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999999877889999999999999999999996544 4456899999999999999999999999999999
Q ss_pred HHHhhccCCccccCCeEEEehhhHHHHHHHHHHH-------hhccccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618 323 AAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA-------VKNLKVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSK 394 (530)
Q Consensus 323 ~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-------~~~~~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 394 (530)
+|+|+|+||.|++.+|+|||+++||+|+++|+++ .+.+++|+| +++++++||+++..+++++.++++.++.+
T Consensus 237 ~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~ 316 (488)
T TIGR02518 237 DSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPE 316 (488)
T ss_pred HHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCC
Confidence 9999999999999999999999999999999998 889999996 67899999999999999999999999999
Q ss_pred CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEcCCHHHH
Q 009618 395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTNNLQRT 470 (530)
Q Consensus 395 Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~----~~~gL~a~v~s~d~~~~ 470 (530)
|+++++||.. .+++++++ ++|.||||++|++|+|+||||+++|+ ++|||+++|||+|.+++
T Consensus 317 gakll~gg~~--------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a 381 (488)
T TIGR02518 317 DAKVLIGEQN--------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIV 381 (488)
T ss_pred CCEEEEeCCC--------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHH
Confidence 9999999842 24567776 79999999999999999999999888 68999999999999999
Q ss_pred HHHHhhccceEEEECCCCC------CCCCCc-----ccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 471 WRVSEALEYGLVGVNEGLI------STEVAP-----FGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 471 ~~~a~~l~~G~v~vN~~~~------~~~~~p-----fGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++++++++|+||||++.. +....| ||+++.++++ .+-|++++++.|+|..+.
T Consensus 382 ~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 382 REFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYGV 445 (488)
T ss_pred HHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEecc
Confidence 9999999999999997542 112344 7777766665 388999999999997764
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-76 Score=619.82 Aligned_cols=402 Identities=21% Similarity=0.283 Sum_probs=352.2
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHH-HHHHHHHHHHHHh
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAK-FIEFYAEEAKRVY 171 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~-~l~~~a~~~~~~~ 171 (530)
++.++++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .++|++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4689999999999999999999999999999999999999999999999999999986 8888887 78888853 333
Q ss_pred CcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH----HHcCCCC
Q 009618 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPP 247 (530)
Q Consensus 172 g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~ 247 (530)
+...+ ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++ .++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 32211 12456788999999999999999999999999999999999999999999999999888776 4799999
Q ss_pred ccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhh
Q 009618 248 GVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 327 (530)
Q Consensus 248 gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~ 327 (530)
|++|++++.+.+.++.|++||+|++|+||||+++++ .++++.+|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 157 g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~ 232 (436)
T cd07122 157 GLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTF 232 (436)
T ss_pred hhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhc
Confidence 999999987778899999999999999999999754 4566789999999999999999999999999999999999
Q ss_pred ccCCccccCCeEEEehhhHHHHHHHHHHHhhcc-------ccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEe
Q 009618 328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 399 (530)
Q Consensus 328 ~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~-------~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl 399 (530)
|+||.|++++|+|||+++||+|+++|+++...+ ++|++ .+.++.+||+++..+.+++.+++..+..+|++++
T Consensus 233 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl 312 (436)
T cd07122 233 DNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVL 312 (436)
T ss_pred cCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEE
Confidence 999999999999999999999999999999887 89999 4678889999999999888888777777777777
Q ss_pred eCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC----CCCcEEEEEcCCHHHHHHHHh
Q 009618 400 LGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT----NAGLAAYIFTNNLQRTWRVSE 475 (530)
Q Consensus 400 ~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~----~~gL~a~v~s~d~~~~~~~a~ 475 (530)
+++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++
T Consensus 313 ~~~--------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~ 377 (436)
T cd07122 313 VAE--------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFAL 377 (436)
T ss_pred EEe--------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHh
Confidence 554 45778899987 56799999999999999999999997 899999999999999999999
Q ss_pred hccceEEEECCCCCCCCCCcccCCCCC---------------CCCCCChHHHHHhhheeeEEEE
Q 009618 476 ALEYGLVGVNEGLISTEVAPFGGVKQS---------------GLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 476 ~l~~G~v~vN~~~~~~~~~pfGG~~~S---------------G~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++++|+||||++.. |||.|.+ |-+...+.-..++|+++|+|.+
T Consensus 378 ~l~aG~V~IN~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 378 RMPVSRILVNTPSS------LGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred hCCceEEEEeCCcc------ccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 99999999998764 2222222 2222233457889999998854
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-76 Score=561.47 Aligned_cols=466 Identities=33% Similarity=0.538 Sum_probs=442.8
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
....+|+|-. +|...+.++|+++++|++|..++.+|.+.+++.|++|++.|-+.|...|.+|.+.++|.|+...+-|.
T Consensus 21 ~gvy~gkw~a--~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg 98 (507)
T KOG2453|consen 21 AGVYHGKWAA--SGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLG 98 (507)
T ss_pred cceeeeeecc--CCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHh
Confidence 3567789976 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHh
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPAL 215 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~AL 215 (530)
+++++|+||...+..+|+++.++.|+|..+..+.+.|..+|...++.-....|.|+|+|.+|+.+|||-...-|.-+.||
T Consensus 99 ~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnnaiaM 178 (507)
T KOG2453|consen 99 KLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAM 178 (507)
T ss_pred hhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCchhhh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred hcCCEEEeecCCCcHHHHHH----HHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 216 ACGCTVVVKPSEFTPLTALA----AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
.+||+|++||++.+|+++.. +.+.|.+--+|++.+....| +.+.++++..+.+++.+.||||+++++.+......
T Consensus 179 v~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqa 257 (507)
T KOG2453|consen 179 VCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQA 257 (507)
T ss_pred hhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhhhhhccccCceeecccccchhhhhHHHHHHHH
Confidence 99999999999999998764 45667777899999999988 78999999999999999999999999999999988
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
+..+..+||||||+.||.+|||+..++...++++...+||+|+..+|++||+++||+.+++|+...+++++|+|+|+.+.
T Consensus 258 rfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl 337 (507)
T KOG2453|consen 258 RFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTL 337 (507)
T ss_pred HhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+||+.++....+.++-+++++++|+++++||+..+.+|+|++|||++ ..+|.++..+|.|.||++|.+|++++||+.+-
T Consensus 338 ~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~ain 416 (507)
T KOG2453|consen 338 IGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAIAIN 416 (507)
T ss_pred eccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhheec
Confidence 99999999999999999999999999999999887678999999998 89999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhh--ccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEA--LEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~--l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+.+.||++||||+|..++-++..- -++|.|.||-++.++ ..-.|||.|..|-||+.|.++.++|++-.+.+++
T Consensus 417 nev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresgsdswkqymrrstctin 493 (507)
T KOG2453|consen 417 NEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDSWKQYMRRSTCTIN 493 (507)
T ss_pred cccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccCchHHHHHHhhceeeee
Confidence 9999999999999999999999874 579999999988765 3678999999999999999999999998877765
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-73 Score=644.62 Aligned_cols=418 Identities=21% Similarity=0.244 Sum_probs=366.2
Q ss_pred EEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHH
Q 009618 85 NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFY 163 (530)
Q Consensus 85 ~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~ 163 (530)
.+...+.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++. ++..++..+.++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999999999875 444444555444
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH--
Q 009618 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 241 (530)
Q Consensus 164 a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-- 241 (530)
.. ..+..|. .+ ..++...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 32 1122222 11 1124557889999999999999999999999999999999999999999999999998888864
Q ss_pred --HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHH
Q 009618 242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN 319 (530)
Q Consensus 242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~ 319 (530)
++|+|+|++|++++.+.+.+..|++|++|++|+||||+.++ +.++.+++|+++|+|||||+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 68999999999998777889999999999999999999964 455668999999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeE-
Q 009618 320 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKV- 398 (530)
Q Consensus 320 ~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v- 398 (530)
.+++++|+|+||.|++++|||||++++|+|+++|+++. +|+++.+++++++++++++...|++.
T Consensus 238 ~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 99999999999999999999999999999999998862 68999999999999999886665543
Q ss_pred eeCCcccC---CCCceEeceE------ecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc----CCCCcEEEEEcC
Q 009618 399 LLGGRRHS---LGMTFYEPTV------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND----TNAGLAAYIFTN 465 (530)
Q Consensus 399 l~gg~~~~---~~~~~~~Ptv------l~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~----~~~gL~a~v~s~ 465 (530)
++||.... ..|.|++||+ +.+++++|++++ |.||||++|++|+|+||||+++|+ ++|||+++|||+
T Consensus 303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~ 381 (862)
T PRK13805 303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTN 381 (862)
T ss_pred ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence 45664311 2367889997 778899999887 799999999999999999999988 489999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCC----------CCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 466 NLQRTWRVSEALEYGLVGVNEGL----------ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 466 d~~~~~~~a~~l~~G~v~vN~~~----------~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|.++++++++++++|+||||++. ...+.+|||| |.||.|+.+|+.|+++|++.|+|..+.
T Consensus 382 d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~~ 451 (862)
T PRK13805 382 DDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKRR 451 (862)
T ss_pred CHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeecc
Confidence 99999999999999999999876 3567899997 999999999999999999999997653
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=553.75 Aligned_cols=469 Identities=25% Similarity=0.367 Sum_probs=427.0
Q ss_pred CCccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH-
Q 009618 51 GLLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM- 128 (530)
Q Consensus 51 ~~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~- 128 (530)
++...+..|+|+.+.. .......+|.+ ..+++.+..++.+++++||++|.+|++.|..+|..+|.+|+++.++++.
T Consensus 56 ~~~evP~vIg~~~v~t--~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlist 133 (561)
T KOG2455|consen 56 RPLEVPLVIGDKEVYT--NDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLIST 133 (561)
T ss_pred CceeccEEECCeeeec--CCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcc
Confidence 4567889999999985 45577889998 6688999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeec-eEEEEECCCCcchHH
Q 009618 129 AHKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPV-GVAGAITPWNFPLAM 206 (530)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~-GVv~~i~p~n~P~~~ 206 (530)
+++-+|....+.-.||...+|.-+ +.+.++++|+.+..+..+.........++.++...++|+ |-|++|+||||-...
T Consensus 134 kyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~ 213 (561)
T KOG2455|consen 134 KYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIG 213 (561)
T ss_pred hHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeec
Confidence 888899999999999999999655 678899999998888777654433335677788888887 999999999998766
Q ss_pred HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHH
Q 009618 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (530)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (530)
.-...+||| +||+|++|||..+.++.+.+.++|+|||+|+|++|+||++++..++.+..+|++.++.||||+.+-+.+-
T Consensus 214 gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 214 GNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred cccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHH
Confidence 666667777 7999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHhcc------cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcc
Q 009618 287 AGAAGT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL 360 (530)
Q Consensus 287 ~~~a~~------~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 360 (530)
+..+.+ ..+++-|+||+|-.+|+++||++.++...++++|.++||.|++.+|+||++++++.+.++|.+.-+++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~ 372 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQL 372 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhc
Confidence 887764 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEE
Q 009618 361 KVGDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438 (530)
Q Consensus 361 ~~G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i 438 (530)
++|+| .|.++.+||+|+...++|++++|+.|+. ....+++||..++..|+|++|||+..-+|.++++.||+||||++|
T Consensus 373 ~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsV 452 (561)
T KOG2455|consen 373 KIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSV 452 (561)
T ss_pred ccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEE
Confidence 99998 7889999999999999999999999876 347899999998767899999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCCCC--CCcccCCCCCCCCCC-ChH
Q 009618 439 LCFKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLISTE--VAPFGGVKQSGLGRE-GSK 510 (530)
Q Consensus 439 ~~~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~~~~--~~pfGG~~~SG~G~~-~g~ 510 (530)
+.|+| ++|++.++ |.++||||.+||+.|.+.+.+..++|+ +|+.|||+-..++. .+||||.+.||+... ||+
T Consensus 453 yvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKaGgp 532 (561)
T KOG2455|consen 453 YVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKAGGP 532 (561)
T ss_pred EEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCCCCc
Confidence 99986 58999998 558999999999999999999999877 89999999777654 699999999999987 999
Q ss_pred HHHHhhheeeEE
Q 009618 511 YGMDEFLEIKYV 522 (530)
Q Consensus 511 ~~l~~~~~~k~v 522 (530)
+.|-.|+...+|
T Consensus 533 ~~l~RwtSp~~i 544 (561)
T KOG2455|consen 533 HYLLRWTSPLSI 544 (561)
T ss_pred eEEEeecCcchh
Confidence 999999988765
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-72 Score=586.18 Aligned_cols=373 Identities=17% Similarity=0.173 Sum_probs=339.0
Q ss_pred HHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-----------HHHHHHHHHHHHHHHHH
Q 009618 99 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-----------GEVDYGAKFIEFYAEEA 167 (530)
Q Consensus 99 ~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-----------~Ev~~~~~~l~~~a~~~ 167 (530)
++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999999999999975543 48999999999998776
Q ss_pred HHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHc---C
Q 009618 168 KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQA---G 244 (530)
Q Consensus 168 ~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a---G 244 (530)
.+..+...+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+++++.++ |
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 5554433322 2357899999999999999999999 9999999999999999999999999999999999887 9
Q ss_pred CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324 (530)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s 324 (530)
+|+++++++++.+.+.+..|+.|+++|+|+||||+++++.+++.+. .+|+++|+||++|+||++|||++.|++.++++
T Consensus 157 ~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 157 GPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred CCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 9999999999867788999999999999999999999999988774 68999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404 (530)
Q Consensus 325 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~ 404 (530)
+|.| ||.|+++++||||+++||+|+++|.++++. +|++++.||.
T Consensus 235 ~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~- 278 (397)
T cd07077 235 KFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK- 278 (397)
T ss_pred hccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-
Confidence 9999 999999999999999999999999998764 5777777763
Q ss_pred cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH----HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccce
Q 009618 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE----EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYG 480 (530)
Q Consensus 405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~----eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G 480 (530)
+.|+.|| ++|.+.+||+||||++|++|+|+| +|++++|+++|||+++|||+|.+++.++++++++|
T Consensus 279 ----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G 348 (397)
T cd07077 279 ----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTA 348 (397)
T ss_pred ----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEE
Confidence 3678886 788999999999999999999996 66678899999999999999999999999999999
Q ss_pred EEEECCCCCCC--CCCcccCCC--CCCCCCCCh-HHHHHhhheeeEEE
Q 009618 481 LVGVNEGLIST--EVAPFGGVK--QSGLGREGS-KYGMDEFLEIKYVC 523 (530)
Q Consensus 481 ~v~vN~~~~~~--~~~pfGG~~--~SG~G~~~g-~~~l~~~~~~k~v~ 523 (530)
+|+||+..... ...||||+| .||+|+++| .+++++|++.|+|+
T Consensus 349 ~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 349 SFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred EEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999887654 678999999 899999999 99999999999985
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=570.46 Aligned_cols=364 Identities=52% Similarity=0.829 Sum_probs=346.1
Q ss_pred HHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC
Q 009618 100 SAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL 179 (530)
Q Consensus 100 ~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~ 179 (530)
+|++|++.|+.++.++|.++|+++++.|.++.++|++++++|+|||+.+++.|+..+++.++|++....+..+...+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 57889999999999999999999999999999999999999999999999999999999999999988777654333334
Q ss_pred CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchh
Q 009618 180 PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPD 259 (530)
Q Consensus 180 ~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~ 259 (530)
.+...+.+++|+|||++|.|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++.+
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~ 161 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDE 161 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchh
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999997767
Q ss_pred HHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeE
Q 009618 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRV 339 (530)
Q Consensus 260 ~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v 339 (530)
.++.|+.|++++.|+||||+++++.|.+.++++++|+++|+||+|++||++|||++.|++.++.++|.++||.|+++++|
T Consensus 162 ~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v 241 (367)
T cd06534 162 VGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRL 241 (367)
T ss_pred HHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEE
Confidence 88999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred EEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecC
Q 009618 340 LVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSN 419 (530)
Q Consensus 340 ~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~ 419 (530)
|||++++|+|+++|+ ||+.+
T Consensus 242 ~v~~~~~~~f~~~l~------------------------------------------------------------tl~~~ 261 (367)
T cd06534 242 LVHESIYDEFVEKLV------------------------------------------------------------TVLVD 261 (367)
T ss_pred EEcHHHHHHHHHhhc------------------------------------------------------------eeeeC
Confidence 999999999999988 66677
Q ss_pred CCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccC
Q 009618 420 VKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGG 498 (530)
Q Consensus 420 ~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG 498 (530)
+++++++++||+|||+++|++|++.||+|+++|++++||+++|||+|.+.++++++++++|+|+||+.+.. .+.+||||
T Consensus 262 ~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg 341 (367)
T cd06534 262 VDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGG 341 (367)
T ss_pred CCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999998876 78899999
Q ss_pred CCCCCCCCCChHHHHHhhheeeEEE
Q 009618 499 VKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 499 ~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
+|+||+|+++|++++++|++.|+|.
T Consensus 342 ~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 342 VKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred cccCccCCCChHHHHHHhceEEEEe
Confidence 9999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=608.83 Aligned_cols=378 Identities=17% Similarity=0.175 Sum_probs=331.7
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH----------------HHHHH
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG----------------EVDYG 156 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~----------------Ev~~~ 156 (530)
+++..+++|++||+.|+.++.++|.++|++++++|+++.++|+ .|+||++.+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4788899999999999999999999999999999999999996 588999987765 47888
Q ss_pred HHHHHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHH
Q 009618 157 AKFIEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234 (530)
Q Consensus 157 ~~~l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 234 (530)
++.++++++ ..+..|...+. ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|+++.
T Consensus 363 ~~~l~~~a~-~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAA-MEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhc-CCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 999999987 33333443321 112344678999999999999999 9998 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCc----cEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618 235 AAAELALQAGIPPG----VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310 (530)
Q Consensus 235 ~l~~~l~~aGlP~g----vv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~ 310 (530)
.+++++.++ +|+| ++++|++ +.+.++.|..|++|++|+||||+.+|+.|++.++ ||+++|+|||||+||++
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~ 514 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDK 514 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECC
Confidence 999999999 9987 6899985 5677888999999999999999999999998874 99999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390 (530)
Q Consensus 311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 390 (530)
|||++.|++.+..++|.+ ||.|+|++|||||+++||+ | .+.+++++
T Consensus 515 dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~-------------------------~--------~~~~~v~~ 560 (715)
T TIGR01092 515 SASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN-------------------------G--------LLDDLIDM 560 (715)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc-------------------------h--------hHHHHHHH
Confidence 999999987777777655 9999999999999999985 1 26677888
Q ss_pred HHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009618 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470 (530)
Q Consensus 391 a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 470 (530)
+.++|++++ ||... . .|+. ..+++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 561 ~~~~Ga~l~-Gg~~~--~-~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a 631 (715)
T TIGR01092 561 LRTEGVTIH-GGPRF--A-AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVA 631 (715)
T ss_pred HHHCCCEEE-CCcch--h-heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHH
Confidence 888999985 77543 1 3442 1356899999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCC----CChHHHHHhhheeeEEEEe
Q 009618 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 471 ~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++++|.||||++....+..||||+|+||+|+ ++|++++++|++.|+|+++
T Consensus 632 ~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 632 EFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred HHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 999999999999999886666778999999999996 3899999999999999886
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=570.98 Aligned_cols=375 Identities=19% Similarity=0.154 Sum_probs=323.5
Q ss_pred HHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHH
Q 009618 101 AFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPL------KEAVGEVDYGAKFIEFYAEEAK 168 (530)
Q Consensus 101 A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~Ev~~~~~~l~~~a~~~~ 168 (530)
|++||+.|+.++..+|.++|+++++.|++++++|+++ +++|+|||. .++..|+..+++.++||++.+.
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3467899999999999998886
Q ss_pred HHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHH----HHH
Q 009618 169 RVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL----ALQ 242 (530)
Q Consensus 169 ~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~----l~~ 242 (530)
. .|...+. ..++...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|+++..++++ +.+
T Consensus 81 ~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 P-VGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred C-CcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 5 3554443 124567788999999999999997 6 67889999999999999999999999999999999 569
Q ss_pred cCCCCccEEeecCCc-hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHH
Q 009618 243 AGIPPGVVNVVMGNA-PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGA 321 (530)
Q Consensus 243 aGlP~gvv~~v~g~~-~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i 321 (530)
+|+|+|++|+|++.+ .+.++.|..||+|++|+||||+.+++.+++.. .+|+++|+|||||+||++|||+|.|++.+
T Consensus 158 aGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~~i 234 (398)
T TIGR00407 158 TGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIKVI 234 (398)
T ss_pred cCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHHHH
Confidence 999999999999744 45788899999999999999999999988653 57999999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 009618 322 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401 (530)
Q Consensus 322 ~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~g 401 (530)
++++|.+ ||.|++.+|+|||+++||+|+++|.++++++++ .+++ .+.+++++.. |
T Consensus 235 v~~~~~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~~----g------ 289 (398)
T TIGR00407 235 VNAKTQR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLEL----G------ 289 (398)
T ss_pred HhhhcCC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHhc----c------
Confidence 9999965 999999999999999999999999999997643 1222 1334444321 1
Q ss_pred CcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceE
Q 009618 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGL 481 (530)
Q Consensus 402 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~ 481 (530)
| ||++ ..+|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus 290 ~-----------~tv~---~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~ 355 (398)
T TIGR00407 290 P-----------ATEA---IVCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAA 355 (398)
T ss_pred C-----------cccc---ccccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeE
Confidence 1 3544 2337899999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCcccCCCCCC----CCCCChHHHHHhhheee
Q 009618 482 VGVNEGLISTEVAPFGGVKQSG----LGREGSKYGMDEFLEIK 520 (530)
Q Consensus 482 v~vN~~~~~~~~~pfGG~~~SG----~G~~~g~~~l~~~~~~k 520 (530)
||||++...++..|||=-.+-| ..-..|+.+++.||+.|
T Consensus 356 v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 356 VYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred EEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999998877788998223322 33348999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-34 Score=299.54 Aligned_cols=362 Identities=16% Similarity=0.121 Sum_probs=264.8
Q ss_pred CHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH--HH
Q 009618 90 GGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM----AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIE--FY 163 (530)
Q Consensus 90 ~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~----~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~--~~ 163 (530)
+.++++..++..+...+....++.++..+++.++++.+. ..+.+..+.+...+|.+.......+......|+ ..
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 455666666666666666778888888888888888775 345566667777788886666555555555443 11
Q ss_pred HHHHHHHhCc--ccCCCCC-CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH
Q 009618 164 AEEAKRVYGE--IIPATLP-DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELA 240 (530)
Q Consensus 164 a~~~~~~~g~--~~~~~~~-g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l 240 (530)
........+. .+....+ +...++.++|+||+++|+|||||+ ..++.+++||++||++|+|||+.+|.++..+.++|
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l 161 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSL 161 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHH
Confidence 1111111121 1111122 455688999999999999999999 79999999999999999999999999999999999
Q ss_pred HHcCCCC----ccEEee--cCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCcc-EEEecCC-
Q 009618 241 LQAGIPP----GVVNVV--MGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAP-CIVFDDA- 312 (530)
Q Consensus 241 ~~aGlP~----gvv~~v--~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~-~iV~~dA- 312 (530)
.++ +|+ +.++++ +|.+.++++.|+.++ |.|+||||+++++.|++.++.+ +.++|+|||++ +|+.+++
T Consensus 162 ~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~ 236 (422)
T cd07080 162 ADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREAL 236 (422)
T ss_pred Hhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhh
Confidence 999 787 888888 465556889999887 8999999999999999988855 46999999955 5555558
Q ss_pred ---CHHHHHHHHHHHHhhccCCccccCCeEEEehhh---HHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHH
Q 009618 313 ---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI---YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 386 (530)
Q Consensus 313 ---D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i---~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~ 386 (530)
|++.+++.+++++|.++||.|+|+++||||+++ +++|.++|.++++++.-..|.. ++ +.....++..
T Consensus 237 ~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~~------~~-~~~~~~~~~~ 309 (422)
T cd07080 237 ESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPAL------SL-SAAESAKIAR 309 (422)
T ss_pred ccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCCC------CC-CHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999876444421 21 4444455544
Q ss_pred HHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009618 387 FVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466 (530)
Q Consensus 387 ~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d 466 (530)
.-..+...+.+....+. .++ ||+....+. +.. ...+=.+.|.++++.+|++..++. +=.|.+++..+
T Consensus 310 ~r~~~~~~~~~~~~~~~----~~~----~v~~~~~~~--~~~-~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~ 376 (422)
T cd07080 310 ARLEAEFYELKGGVSRD----LGW----TVIISDEIG--LEA-SPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSP 376 (422)
T ss_pred HHHHHHHHHHhcCCCCC----CCe----EEEEeCCCC--ccC-CCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecCh
Confidence 44433333332221111 111 233222111 111 344457889999999999999985 77899999988
Q ss_pred HHHHHHHHhhcc
Q 009618 467 LQRTWRVSEALE 478 (530)
Q Consensus 467 ~~~~~~~a~~l~ 478 (530)
.+. .++++++.
T Consensus 377 ~~~-~~~~~~l~ 387 (422)
T cd07080 377 AEL-AELADALA 387 (422)
T ss_pred hhH-HHHHHHHH
Confidence 887 77777765
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=269.70 Aligned_cols=387 Identities=19% Similarity=0.226 Sum_probs=300.3
Q ss_pred HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH------HcCCCHHHHH------HHHHHHHHH
Q 009618 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITL------EQGKPLKEAV------GEVDYGAKF 159 (530)
Q Consensus 92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~------e~Gk~~~~a~------~Ev~~~~~~ 159 (530)
.++.+..++|++|+.....++.++|.+.|.++++.|+++++++.+.... ++|.+..... ..++..++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 3567788899999999999999999999999999999999998886654 4454332221 234444444
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 237 (530)
++..+...+.+ |.+... ...|.+.+..+.|+||+++| |..--..++...+.+|.+||+||+|.+..+..+...++
T Consensus 83 l~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~ 159 (417)
T COG0014 83 LRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIV 159 (417)
T ss_pred HHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHH
Confidence 44444333222 222222 12478888999999999999 66666677888899999999999999999999998887
Q ss_pred HH----HHHcCCCCccEEeecCCchh-HHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCC
Q 009618 238 EL----ALQAGIPPGVVNVVMGNAPD-IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312 (530)
Q Consensus 238 ~~----l~~aGlP~gvv~~v~g~~~~-~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dA 312 (530)
++ |.++|+|++.+|+++..+.+ +.+.|..+..||.|+-.||..--+.+.+.+ -.|++-..-|++.++|+++|
T Consensus 160 ~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a---~vPVi~~~~G~CHiyvd~~A 236 (417)
T COG0014 160 EVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA---TVPVIEHGVGNCHIYVDESA 236 (417)
T ss_pred HHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC---cCCEEecCcceEEEEecccC
Confidence 66 56789999999999875544 555555578899999999999877776655 35666555699999999999
Q ss_pred CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH
Q 009618 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392 (530)
Q Consensus 313 D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~ 392 (530)
|+|.|.+-++.++...-+ .|.+.+.++||+.+.++|+..|.+.+....
T Consensus 237 Dld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~g------------------------------- 284 (417)
T COG0014 237 DLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAG------------------------------- 284 (417)
T ss_pred CHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcC-------------------------------
Confidence 999999999999999876 999999999999999999999998876421
Q ss_pred HCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHH
Q 009618 393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472 (530)
Q Consensus 393 ~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~ 472 (530)
-++........ +-|.. ..+....-+..|..-+++.|..+++.|+||+.+|..+.++|=+|.|+|...+++
T Consensus 285 ---velr~d~~~~~-----~~~~~--~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~ 354 (417)
T COG0014 285 ---VELRGDAEALA-----LLPDA--VKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITEDYANAER 354 (417)
T ss_pred ---eEEEcCHHHHH-----hcccc--CCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHH
Confidence 11111110000 00000 012222345688999999999999999999999999999999999999999999
Q ss_pred HHhhccceEEEECCCCCCCCCCcccCCCCCCCCCC----ChHHHHHhhheeeEEEEec
Q 009618 473 VSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 473 ~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~----~g~~~l~~~~~~k~v~~~~ 526 (530)
|.+.+++..||||..+.+....-||=--+-|+... .|+-||+++|..|+|..+.
T Consensus 355 F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G~ 412 (417)
T COG0014 355 FVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRGD 412 (417)
T ss_pred HHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeCC
Confidence 99999999999999998888777764445555544 8999999999999998873
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-24 Score=208.17 Aligned_cols=381 Identities=18% Similarity=0.181 Sum_probs=287.9
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHH------HHHHHHHHHHH
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEAV------GEVDYGAKFIE 161 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a~------~Ev~~~~~~l~ 161 (530)
+++..+.|++++..++.++.++|.++|.+++++|+.+..++... .+.|+|.....-. +.+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35667889999999999999999999999999999877766553 3445664322211 23333333344
Q ss_pred HHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHH
Q 009618 162 FYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239 (530)
Q Consensus 162 ~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~ 239 (530)
..++ .+...|.+... -..|...+....|+||.++| |......+..-...|+++||.+++|....+..+...|.++
T Consensus 82 ~ia~-~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAE-LEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHh-cccchhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 4443 22333433221 12466677888999999999 6666666666677899999999999999999999888877
Q ss_pred HHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHH
Q 009618 240 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLN 315 (530)
Q Consensus 240 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~ 315 (530)
..++ |.|.+.+++|.. ..++.+.|-.+..||.|+-.||+.--+.|..... .|+.-+-.|.+.++|++|||++
T Consensus 159 v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~~ 234 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADLD 234 (433)
T ss_pred HHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCHH
Confidence 6655 779999999987 5678777777888999999999998888766542 6888888899999999999999
Q ss_pred HHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618 316 VAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394 (530)
Q Consensus 316 ~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 394 (530)
.|.+-+..++..+- -.|.+...+++|++. ...|.+.|...++ .+
T Consensus 235 kA~riv~DaK~dYP-AaCNAmETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~ 279 (433)
T KOG4165|consen 235 KAKRIVRDAKCDYP-AACNAMETLLIHKDLEQSPFFDDLINMLK----------------------------------EE 279 (433)
T ss_pred HHHHHHhcccCCCc-hhhhhHHHHhccHhhhhcchHHHHHHHHH----------------------------------hc
Confidence 99888888887765 489999999999973 2334333333222 23
Q ss_pred CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHH
Q 009618 395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 474 (530)
Q Consensus 395 Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a 474 (530)
|.++.+|..... ++.--++...-++.|.-.-.++|-.+++.++||+.+|..+.++|-.|.|+|...+++|.
T Consensus 280 gVtl~agpkl~~---------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl 350 (433)
T KOG4165|consen 280 GVTLHAGPKLAA---------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFL 350 (433)
T ss_pred CeEEecChhHHh---------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHH
Confidence 444433332210 01111344455678887788999999999999999999999999999999999999999
Q ss_pred hhccceEEEECCCCCCCCCCcccCCCCCCCCCC----ChHHHHHhhheeeEEEEe
Q 009618 475 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 475 ~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~----~g~~~l~~~~~~k~v~~~ 525 (530)
..+++..|+.|..+.++...-||=--+-|+... +||-|++-++.+|++..+
T Consensus 351 ~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 351 KHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred hccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999999999999888888875556665443 799999999999998665
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.76 E-value=8e-15 Score=152.75 Aligned_cols=341 Identities=16% Similarity=0.141 Sum_probs=218.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH--HHHHHHHHhCc--ccCCCCCCce
Q 009618 110 KLTAAERSKGLRKWYDLLMAH--KEELGQLITLEQGKPLKEAVGEVDYGAKFIEF--YAEEAKRVYGE--IIPATLPDRR 183 (530)
Q Consensus 110 ~~~~~~R~~iL~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~--~a~~~~~~~g~--~~~~~~~g~~ 183 (530)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. ++....+|+. .....+.-.+. .+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 456666677777777766642 222555566667777666654 4444433321 11111111122 1111122333
Q ss_pred eEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCC----ccEEee--cCCc
Q 009618 184 LFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPP----GVVNVV--MGNA 257 (530)
Q Consensus 184 ~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~----gvv~~v--~g~~ 257 (530)
.+..+.|+|+++.|.|.|-|+.. ++.++.+|.+||..|+|+|+..+..+..|.+.|.+. .|. ..+.++ ++.+
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d 158 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGD 158 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCc
Confidence 67789999999999999999954 566788999999999999999999999999999887 554 345566 4545
Q ss_pred hhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCccEEEecCCCHHHHHHHHHHHHhhccCCccccC
Q 009618 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCA 336 (530)
Q Consensus 258 ~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~ 336 (530)
.++.+.+.+ ..|+|+.+||.++.+.+.+.+. ...+ .+..| -.+-.++..+++++.+++.+..-.+...+|.|+|+
T Consensus 159 ~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~-~~~~-~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 159 EELEEALSQ--QADAVVAWGGDETIRAIRQPLP-PGAR-LIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred hHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC-CCCc-EeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 677777774 4688999999999999988333 3233 44444 45667777788999999999999999999999999
Q ss_pred CeEEEe---hhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHH-----HHHHCCCeEeeCCcccCCC
Q 009618 337 NRVLVQ---EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE-----DAVSKGAKVLLGGRRHSLG 408 (530)
Q Consensus 337 ~~v~V~---~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~-----~a~~~Ga~vl~gg~~~~~~ 408 (530)
+.|||. ..-.++|.++|.+++.+..---|.. ..+......+....+ .+...+.++..+....
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~-------~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--- 304 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALERAAERYPRG-------ELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNS--- 304 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHHHHHhCCCc-------CCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCC---
Confidence 999998 3446788888877776532111111 122222222322222 2344444454222111
Q ss_pred CceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhh
Q 009618 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEA 476 (530)
Q Consensus 409 ~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~ 476 (530)
-||+....+ .. ....++=.+.|.++++.+|++..++....=.|.+++... .+...+++.
T Consensus 305 -----~~V~~~~~~--~~-~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~ 363 (399)
T PF05893_consen 305 -----WTVIVSPEP--PL-LPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARA 363 (399)
T ss_pred -----EEEEECCCc--cc-ccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHH
Confidence 144433221 11 223345588999999999999999887332588887544 455555553
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.6e-13 Score=115.11 Aligned_cols=145 Identities=26% Similarity=0.358 Sum_probs=115.2
Q ss_pred HHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHH-HCCCeEeeCCcccCCCCceEeceEecCCCCCCc
Q 009618 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV-SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEML 425 (530)
Q Consensus 347 d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~-~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~ 425 (530)
....+.|++..+.+++-+...++++. .+..+++.++|+.-. ..|-....-|- ..++|+.||+|. ++|+|.
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~ms 79 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNMS 79 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCcc
Confidence 44556778888889998888888886 566778888887511 11222222222 347899999999 999999
Q ss_pred ccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCC
Q 009618 426 VSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVK 500 (530)
Q Consensus 426 ~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~ 500 (530)
++.||+||||+....-.++||+|..+|+.+||....|||.+.+.++.+....++|-+.+|.+... .+...|.|-+
T Consensus 80 ~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~~ 155 (157)
T KOG2449|consen 80 CYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGDR 155 (157)
T ss_pred eeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceeccccC
Confidence 99999999999999999999999999999999999999999999999999999999999986542 2344455543
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.19 E-value=6e-10 Score=103.97 Aligned_cols=171 Identities=22% Similarity=0.251 Sum_probs=129.1
Q ss_pred ccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHH
Q 009618 304 APCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEK 383 (530)
Q Consensus 304 ~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~ 383 (530)
.-+||++|.|++.|+.-++.+.-.--| ..+.-.|+|||++.|+|+++++.+++.+. +.. -+...+.+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~------~~v-----a~Hpny~r 72 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS------PQV-----ANHPNYLR 72 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC------hhh-----ccCcHHHH
Confidence 348999999999999999999865433 34667899999999999999999987653 222 23334555
Q ss_pred HHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC--CCCcEEE
Q 009618 384 VETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDT--NAGLAAY 461 (530)
Q Consensus 384 ~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~--~~gL~a~ 461 (530)
-.+.++ .-+++++.++.... ..--.|.++.+.+.+. +-. --.+|+++..|++..||+++++.- +|+ +.+
T Consensus 73 sl~~i~---~l~~~~I~~~~~~~--~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVs 143 (215)
T PF07368_consen 73 SLKKIK---CLNAKTIVADFENV--PPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD-SVS 143 (215)
T ss_pred HHHHHH---hcCCeEEEecccCC--CCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEE
Confidence 555554 47899988843321 1234688888766543 233 334799999999999999999974 455 999
Q ss_pred EEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcc
Q 009618 462 IFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPF 496 (530)
Q Consensus 462 v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pf 496 (530)
||++-.+.+-.++.+|++..+|||+... ..|..++
T Consensus 144 iW~ekla~~Yel~~~l~~~~f~iNC~~V~L~PI~~~ 179 (215)
T PF07368_consen 144 IWNEKLASAYELAARLPCDTFYINCFNVDLSPIMPF 179 (215)
T ss_pred EeCcHHHHHHHHHHhCCCCEEEEEeccCCchhhhhh
Confidence 9999999999999999999999999776 3444444
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.3e-08 Score=114.73 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=86.9
Q ss_pred cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (530)
Q Consensus 175 ~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 254 (530)
+|+.. |+.+..+..|+|+++||+||| ..++.|++.||++||+||+||++.++. . -+.+|..+.+.+
T Consensus 1064 LPGPT-GEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~--~~~Lp~~~~~~~- 1129 (1208)
T PRK11905 1064 LPGPT-GESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------A--LADLPGLVAARI- 1129 (1208)
T ss_pred CCCCC-CcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------H--HHhCcccccccc-
Confidence 44443 899999999999999999999 568899999999999999999998762 1 122566555544
Q ss_pred CCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc---cceEEeecC
Q 009618 255 GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT---VKKVSLELG 301 (530)
Q Consensus 255 g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~---~~~~~lelg 301 (530)
.++..+..+++++.|.|+|++++.+.|.++++++ +.|++.|..
T Consensus 1130 ----~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1130 ----DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ----ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 2334677888999999999999999999998876 456666664
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.093 Score=54.64 Aligned_cols=258 Identities=23% Similarity=0.264 Sum_probs=125.3
Q ss_pred CCceeEEEEeeceEEEEECC-CCcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeecC
Q 009618 180 PDRRLFVLKQPVGVAGAITP-WNFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (530)
Q Consensus 180 ~g~~~~~~~~P~GVv~~i~p-~n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 255 (530)
+|.....++.|+--|++-.| ..+|+. +.+....||-.+|..=|+ -|+...-.....+.-.++.+|+.+ ++ -+ |
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e-vy-~v-G 172 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE-VY-KV-G 172 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE-EE-E---
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE-EE-ec-c
Confidence 46677788999999999998 344443 334567799999975443 444432233334455567788853 22 22 3
Q ss_pred CchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccE--EEecCCCHHHHHHHHHHHHhhc
Q 009618 256 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPC--IVFDDADLNVAVNGALAAKFRN 328 (530)
Q Consensus 256 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~--iV~~dAD~~~a~~~i~~s~f~~ 328 (530)
|.+.-.+|.- -|.||+|+=.|..=+...=..-.. .+-+.+ -|.+=+ |-+++||.++.+.+++..+=..
T Consensus 173 -GaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd 247 (412)
T PF00815_consen 173 -GAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG----DVGIDMIAGPSEVLVIADETANPEFVAADLLAQAEHD 247 (412)
T ss_dssp -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH----S-EES------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred -cHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC----CcccCCCCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence 4444444443 388999997777655322111111 222222 244433 3445789999999998877655
Q ss_pred cCCccccCCeEEEe--hhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 009618 329 SGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406 (530)
Q Consensus 329 ~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~ 406 (530)
.. .+-++|. +.+.++..+.+.+.+..+. .. +.++.++.
T Consensus 248 ~~-----a~~vLvt~s~~la~~V~~~v~~~l~~l~---------------r~-------~i~~~sl~------------- 287 (412)
T PF00815_consen 248 PD-----AQAVLVTTSEELAEAVEAEVERQLEELP---------------RR-------EIAEKSLE------------- 287 (412)
T ss_dssp TT------EEEEEES-HHHHHHHHHHHHHHHTT-T---------------TH-------HHHHHHHT-------------
T ss_pred CC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------ch-------HHHHHHHH-------------
Confidence 43 2335553 3445555555555554431 11 11222221
Q ss_pred CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 009618 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 485 (530)
Q Consensus 407 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN 485 (530)
+| .++.++|.+|+++++|..-.= -..|.++|.. .+..+++ +|.|++.
T Consensus 288 -------------------------~g---~ii~~~~l~ea~~~~N~~APE-HLel~~~~~~---~~~~~i~~AGaiFlG 335 (412)
T PF00815_consen 288 -------------------------NG---AIIVVDSLEEAIELANEYAPE-HLELQVEDPE---ELLEKIRNAGAIFLG 335 (412)
T ss_dssp -------------------------T----EEEE-SSHHHHHHHHHHH--S-EEEEESTTHH---HHGGG--S-SEEEES
T ss_pred -------------------------CC---eEEEECCHHHHHHHHHHhhHH-HHHHHHcCHH---HHHHHhhccChhhcC
Confidence 11 355679999999999985332 4567788874 5667765 8999999
Q ss_pred CCCC---------CCCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 486 EGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 486 ~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
.++. .+..+|= +|..|..|.-+...|++.-++
T Consensus 336 ~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 336 EYTPEALGDYAAGPNHVLPT-----GGTARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp TT--HHHHHHTSSS-----------TTGGGT---S-GGGGEEEEEE
T ss_pred CCCCHHHhhhccCCCccCCC-----CccccccCCCcHHHccceeeE
Confidence 8664 1234554 556777777788888876554
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.28 Score=50.85 Aligned_cols=256 Identities=21% Similarity=0.259 Sum_probs=146.3
Q ss_pred CCCCceeEEEEeeceEEEEECC---CCcchHHHHHHHhhHhhcCCEEE--eecCCCcHHHHHHHHHHHHHcCCCCccEEe
Q 009618 178 TLPDRRLFVLKQPVGVAGAITP---WNFPLAMITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNV 252 (530)
Q Consensus 178 ~~~g~~~~~~~~P~GVv~~i~p---~n~P~~~~~~~l~~ALaaGN~VV--lKps~~~~~~~~~l~~~l~~aGlP~gvv~~ 252 (530)
..+|-....++.|+--|++-.| .-||... +....||-.+|+.=| .-|++..- ....+.-..+.+|+.+ ++.
T Consensus 104 ~~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStv-LM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~- 179 (425)
T COG0141 104 TEPGVVLGQRWRPIERVGLYVPGGKAAYPSTV-LMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK- 179 (425)
T ss_pred ccCCcEEEEEEEEhhheEEEccCCCcCChHHH-HHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-
Confidence 3457778889999999999888 4555543 445679999998543 44555422 2233334456666653 222
Q ss_pred ecCCchhHHhHhhcC----CCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCccEE--EecCCCHHHHHHHHHHHH
Q 009618 253 VMGNAPDIGDALLTS----PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCI--VFDDADLNVAVNGALAAK 325 (530)
Q Consensus 253 v~g~~~~~~~~L~~~----~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~~~i--V~~dAD~~~a~~~i~~s~ 325 (530)
+ | |.+.-.+|.-. +.||+|+=.|+.-+.-. +..-. ..+-..+- |.+=++ -+++||.++.+.+++.-+
T Consensus 180 v-G-GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaA--Kr~v~--g~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 180 V-G-GAQAIAALAYGTETVPKVDKIVGPGNAYVTAA--KRLVS--GVVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred c-c-CHHHHHHHHccCCcCCccCeeeCCCcHHHHHH--HHHhh--CCcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 1 3 55555566655 88999987777654311 11100 11111111 443333 344589999999988776
Q ss_pred hhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCc
Q 009618 326 FRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 403 (530)
Q Consensus 326 f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~ 403 (530)
=..- ..+.++|.. .+.++..+++.+.+..+. + .+...+-+. .
T Consensus 254 EHd~-----~a~aiLvT~s~~la~~v~~~v~~~l~~l~----------------~--~ei~~~~l~---~---------- 297 (425)
T COG0141 254 EHDP-----DAQAILVTDSEELAEAVEAAVERQLETLP----------------R--AEIARKALE---N---------- 297 (425)
T ss_pred hcCC-----CceEEEEeCcHHHHHHHHHHHHHHHHhcc----------------H--HHHHHHHHH---h----------
Confidence 5542 244566644 334444444444444331 0 112221111 1
Q ss_pred ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEE
Q 009618 404 RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLV 482 (530)
Q Consensus 404 ~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v 482 (530)
|| .|+..+|+||+++++|..-.= -.-|.++|.. .+..+++ +|.|
T Consensus 298 ----------------------------~g---~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nAGsI 342 (425)
T COG0141 298 ----------------------------YG---AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNAGSI 342 (425)
T ss_pred ----------------------------CC---eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhccccee
Confidence 11 345669999999999985322 3456777765 4666665 8999
Q ss_pred EECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhhee
Q 009618 483 GVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEI 519 (530)
Q Consensus 483 ~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~ 519 (530)
+++.++.. +..+| .+|+-|..|.-++..|++.
T Consensus 343 FlG~~sPe~~GDY~aG~NHVLP-----T~g~AR~~s~L~v~dF~K~ 383 (425)
T COG0141 343 FLGHYSPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKR 383 (425)
T ss_pred eecCCCCccccccccCCCccCC-----CCccchhcCCccHHHhhhH
Confidence 99986642 22445 4556666666677777653
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0023 Score=75.90 Aligned_cols=100 Identities=15% Similarity=0.123 Sum_probs=75.8
Q ss_pred CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhH
Q 009618 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI 260 (530)
Q Consensus 181 g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~ 260 (530)
|+.|..+..|+|+|+|+.+-. ...+.+++++|++||.||+..++.. . +++ +++|+.+.+.+.-. .
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~----~~~--~~Lp~~v~~~v~~~---~ 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---R----ALV--AALPAAVQARIQLA---K 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---H----HHH--HhccHHHHhHhhhc---c
Confidence 899999999999999998733 3678999999999999988654432 1 122 46999888876331 1
Q ss_pred HhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceE
Q 009618 261 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV 296 (530)
Q Consensus 261 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~ 296 (530)
........++.|.|.|..+..+.+.++++++-.++
T Consensus 1243 -~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaI 1277 (1318)
T PRK11809 1243 -DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPI 1277 (1318)
T ss_pred -ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCe
Confidence 22334467999999999999999999988775443
|
|
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.6 Score=48.42 Aligned_cols=286 Identities=20% Similarity=0.232 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecC
Q 009618 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPS 226 (530)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps 226 (530)
..++.+.+.++.|...... ....-...+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+ -|+
T Consensus 55 ~ai~~A~~nI~~fh~~q~~--~~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 132 (390)
T cd06572 55 EAIELAAENIRAFHEAQLP--KDWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPP 132 (390)
T ss_pred HHHHHHHHHHHHHHHHhCC--CCeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCc
Confidence 3455556666655543221 11111122577778899999989888885 35554 334567899999986543 444
Q ss_pred CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-C
Q 009618 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-G 301 (530)
Q Consensus 227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-g 301 (530)
...-.....+.-..+.+|+.+ ++ -+ | |.+...+|.- -|.||+|+=.|..-+...=.. .. ..+-+.+ -
T Consensus 133 ~~~g~i~p~iL~aa~~~Gv~e-iy-~v-G-GaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~A 204 (390)
T cd06572 133 RKDGKINPAILAAAKLAGVDE-IY-KV-G-GAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRL-VS---GDVGIDMPA 204 (390)
T ss_pred CCCCCCCHHHHHHHHHcCCcE-Ee-cc-C-CHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHH-hc---CCcCccCCC
Confidence 321112222333456677754 12 12 3 4444444443 678999987776554321111 11 1122222 2
Q ss_pred CCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618 302 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 377 (530)
Q Consensus 302 G~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~ 377 (530)
|.+=++| +++||.++.+.+++..+=... . .+.++|.. .+.++..+.+.+.++.+. .
T Consensus 205 GPSEvlIiAD~~A~p~~vAaDLLaQAEH~~----~-a~aiLvT~s~~la~~V~~~v~~ql~~l~---------------r 264 (390)
T cd06572 205 GPSEVLVIADETANPEFVAADLLSQAEHDP----D-SQAILVTTSEELAEAVEEEVERQLAELP---------------R 264 (390)
T ss_pred CCceEEEEeCCCCCHHHHHHHHHhhhccCC----C-CeEEEEECCHHHHHHHHHHHHHHHHhCC---------------c
Confidence 4444433 445899999999887765432 1 33455533 445555555555555441 0
Q ss_pred HHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCC
Q 009618 378 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 457 (530)
Q Consensus 378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~g 457 (530)
. + .++.+..+ + -.|+.++|.+|+++++|..-.=
T Consensus 265 ~---~----~~~~~~~~-------------------------------------~---g~ii~~~~~~eai~~~N~~APE 297 (390)
T cd06572 265 R---E----IAAKSLLD-------------------------------------Y---GAIILVDDLEEAIELANEYAPE 297 (390)
T ss_pred H---H----HHHHHHHh-------------------------------------C---CEEEEECCHHHHHHHHHhhchh
Confidence 0 1 11111111 1 1245669999999999985322
Q ss_pred cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 458 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 458 L~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
-.-|+++|... +..+++ +|.|++..++.. +..+|- +|..|..|..+...|++.-++
T Consensus 298 -HLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 298 -HLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPT-----GGTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred -hheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCC-----CcceeecCCCCHHHheeccee
Confidence 34567778754 666665 899999876541 224554 456677666788888876544
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.68 E-value=1 Score=46.74 Aligned_cols=284 Identities=20% Similarity=0.216 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~ 227 (530)
-++.+.+.++.|...... ........+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+ -|+.
T Consensus 52 ai~~A~~~I~~fh~~q~~--~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~ 129 (393)
T TIGR00069 52 ALELAAENIRAFHEAQLP--RSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPG 129 (393)
T ss_pred HHHHHHHHHHHHHHHhCC--CCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCC
Confidence 455555666555433221 11111123567777889999999999996 33443 344567799999986543 4442
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeec-CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVM-GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 301 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~-g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg- 301 (530)
..--....+.-..+.+|+.+ +.. | |.+.-.+|.- -|.||+|+=.|..-+... +..- ...+-+.+-
T Consensus 130 ~~g~i~p~iL~AA~~~Gv~e----Iy~vG-GAQAIAAlAyGTesIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~A 200 (393)
T TIGR00069 130 KDGKINPAVLAAAKLAGVDE----VYKVG-GAQAIAALAYGTETVPKVDKIVGPGNIYVTAA--KKLV--FGDVGIDMPA 200 (393)
T ss_pred cCCCCCHHHHHHHHHcCCCe----ehhcC-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCccCcCCCC
Confidence 21012222333557787764 222 3 4444344433 468999987776654321 1110 012222222
Q ss_pred CCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618 302 GNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 377 (530)
Q Consensus 302 G~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~ 377 (530)
|.+=++| +++||.++.+.+++..+=.... .+.++| .+++.++..+.+.+.+..+.
T Consensus 201 GPSEvlViAD~~Anp~~iAaDLLaQAEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~---------------- 259 (393)
T TIGR00069 201 GPSEVLVIADETANPEFVAADLLSQAEHDPD-----AQAILVTTSEELAEAVQEEIERQLATLP---------------- 259 (393)
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------
Confidence 5444444 4458999999998877655432 344555 44555666666666655541
Q ss_pred HHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCC
Q 009618 378 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 457 (530)
Q Consensus 378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~g 457 (530)
.. +..++++.. +| .|+.++|.||+++++|..-.=
T Consensus 260 --r~----~i~~~al~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~APE 293 (393)
T TIGR00069 260 --RR----EIARKSLED-------------------------------------NG---AIILVDDLEEAIEISNDYAPE 293 (393)
T ss_pred --hH----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhChH
Confidence 01 122222221 11 234668999999999985322
Q ss_pred cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 458 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 458 L~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
-.-|+++|.. .+..+++ +|.|++..++.. +..+| .+|..|..|.-+...|++.-++
T Consensus 294 -HLel~~~~p~---~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLP-----T~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 294 -HLELQTKNPE---ELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLP-----TGGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred -hheehhCCHH---HHHhhcCccceeccCCCCchhhhhccCCCCcccC-----CCcceeecCCccHHHhccceeE
Confidence 2346777774 4666665 899999776541 12344 4567777777788889876554
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=1.2 Score=46.37 Aligned_cols=258 Identities=19% Similarity=0.205 Sum_probs=149.2
Q ss_pred CCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeecC
Q 009618 180 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255 (530)
Q Consensus 180 ~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 255 (530)
+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+ -|++... ....+.-..+.+|+.+ +--+ |
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e--Iy~i-G 175 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ--VFQV-G 175 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe--eecc-C
Confidence 456667788999999999884 44543 334567899999986554 3433211 2222333457777764 2222 3
Q ss_pred CchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccEEE--ecCCCHHHHHHHHHHHHhhc
Q 009618 256 NAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCIV--FDDADLNVAVNGALAAKFRN 328 (530)
Q Consensus 256 ~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~iV--~~dAD~~~a~~~i~~s~f~~ 328 (530)
|.+.-.+|.- -|.||+|+=.|..=+... +..- ...+-+.+ -|.+=+.| +++||.++.+.+++..+=..
T Consensus 176 -GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQAEHd 250 (416)
T PRK13770 176 -GAQSIAALTYGTETIPKVDKIVGPGNQFVAYA--KKYL--FGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHD 250 (416)
T ss_pred -CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHhccC
Confidence 4443344433 568999987776654321 1100 11222222 14444443 44589999999988776554
Q ss_pred cCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC
Q 009618 329 SGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406 (530)
Q Consensus 329 ~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~ 406 (530)
.. .+.++| .+.+.++..+.+.+.+..+. . . +.+++++..
T Consensus 251 ~~-----a~~iLvT~s~~la~~V~~ev~~ql~~lp---------------r---~----~i~~~al~~------------ 291 (416)
T PRK13770 251 EL-----ARTYVISEDAQVLKDLESRIAKALPNVD---------------R---Y----DIVSKSIAN------------ 291 (416)
T ss_pred CC-----CcEEEEeCCHHHHHHHHHHHHHHHHhCC---------------h---H----HHHHHHHHh------------
Confidence 32 344555 44555666666666655541 0 1 122222211
Q ss_pred CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEEC
Q 009618 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGVN 485 (530)
Q Consensus 407 ~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN 485 (530)
+| .|+.++|.||+++++|..-.= -.-|.++|.. .+..+++ +|.|++.
T Consensus 292 -------------------------~g---~ii~v~~~eeai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG 339 (416)
T PRK13770 292 -------------------------QH---YLIHASNFDEACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFIG 339 (416)
T ss_pred -------------------------CC---EEEEECCHHHHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceeccC
Confidence 11 245669999999999985322 2347778874 5666666 8999997
Q ss_pred CCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 486 EGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 486 ~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
.++.. +..+| .+|..|..|.-+...|++.-++
T Consensus 340 ~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 340 HYSPEVIGDYVAGPSHVLP-----TNRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred CCCchhhhccccCCCCcCC-----CCcceeccCCCcHHHeecceee
Confidence 76541 12344 4566777666788888876544
|
|
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=1.4 Score=46.13 Aligned_cols=286 Identities=19% Similarity=0.221 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecC
Q 009618 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPS 226 (530)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps 226 (530)
.-+..+.+.++.|......-.........+|.....++.|+--|++-.|. .+|+. +.+....||-.+|+.=|+ -|+
T Consensus 76 ~ai~~A~~nI~~fh~~q~~~~~~~~~~~~~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp 155 (426)
T PRK12447 76 EDIRFAQDQVRRFAEAQRDSLQDLEVETLPGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPP 155 (426)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCceEEecCCCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCC
Confidence 34555556665555332110000110123466677789999999999884 44553 334567899999986543 444
Q ss_pred CCcHHHHHHHHHHHHHcCCCCccEEeec-CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-
Q 009618 227 EFTPLTALAAAELALQAGIPPGVVNVVM-GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL- 300 (530)
Q Consensus 227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~-g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel- 300 (530)
.........| -..+.+|+.+ +.. | |.+.-.+|.- -|.||+|+=.|..-+... +..- ...+-+.+
T Consensus 156 ~~~~i~p~iL-~Aa~~~Gv~e----Iy~vG-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~ 225 (426)
T PRK12447 156 FPGEPPPAIV-AAMHLAGADE----IYVLG-GVQAVAAMAYGTETIKPVDMLVGPGNAYVAEA--KRQL--FGRVGIDLF 225 (426)
T ss_pred CCCCCCHHHH-HHHHHcCCCe----ehhcC-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHh--cCccCcCCC
Confidence 3211222223 3457777764 222 3 4443344433 568999987776654321 1110 11222222
Q ss_pred CCCccEEE--ecCCCHHHHHHHHHHHHhhccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccC
Q 009618 301 GGNAPCIV--FDDADLNVAVNGALAAKFRNSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 376 (530)
Q Consensus 301 gG~~~~iV--~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli 376 (530)
-|.+=+.| +++||.++.+.+++..+=.... .+.++| .+.+.++..+.+.+.++.+.
T Consensus 226 AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~-----a~~iLvT~s~~la~~V~~~v~~ql~~l~--------------- 285 (426)
T PRK12447 226 AGPTETLVIADDTADPELVATDLLGQAEHGPN-----SPAVLITTSRKLAEEVLAEIERLLAILP--------------- 285 (426)
T ss_pred CCCceeEEEeCCCCCHHHHHHHHHHHhccCCC-----CceEEEECCHHHHHHHHHHHHHHHHhCC---------------
Confidence 25444444 3458999999998877755432 334555 34555565555555555441
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCC
Q 009618 377 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNA 456 (530)
Q Consensus 377 ~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~ 456 (530)
+ . +.+++++.+ +| .|+.++|.||+++++|..-.
T Consensus 286 -r--~----~i~~~sl~~-------------------------------------~g---~ii~v~~l~ea~~~~N~~AP 318 (426)
T PRK12447 286 -T--A----DVASAAWRD-------------------------------------YG---EVILCDDLEEMVAEADRYAS 318 (426)
T ss_pred -H--H----HHHHHHHHh-------------------------------------CC---EEEEECCHHHHHHHHHhhCh
Confidence 1 1 122222211 11 23456899999999999533
Q ss_pred CcEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 457 GLAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 457 gL~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
= -.-|.++|. +.+..+++ +|.|++..++.. +..+| .+|..|..|.-+.+.|++.-++
T Consensus 319 E-HLel~~~~~---~~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLP-----T~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 319 E-HVQVMTEDP---DWFLENMTNYGALFLGERTNVAYGDKVIGTNHVLP-----TSGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred H-heeehhCCH---HHHHhhcCccceeccCCCCchhhhhcccCCCcccC-----CCcceeecCCCcHHHhccceeE
Confidence 2 234777887 45666665 899999765541 12344 4667788777788889876544
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.16 E-value=2.1 Score=44.88 Aligned_cols=259 Identities=22% Similarity=0.255 Sum_probs=149.9
Q ss_pred CCCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEEe--ecCCCcHHHHHHHHHHHHHcCCCCccEEeec
Q 009618 179 LPDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVVV--KPSEFTPLTALAAAELALQAGIPPGVVNVVM 254 (530)
Q Consensus 179 ~~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VVl--Kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 254 (530)
.+|...-..+.|+--|++-.|. .+|+. +.+....||-.+|..=|+ -|+.... ....+.-.++.+|+.+ +--+
T Consensus 109 ~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e--Iy~v- 184 (425)
T PRK00877 109 APGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE--VYKV- 184 (425)
T ss_pred cCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe--eecc-
Confidence 3466677788999999999996 33433 344567899999986543 4443111 2223333557777764 2222
Q ss_pred CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeec-CCCccEEEe--cCCCHHHHHHHHHHHHhh
Q 009618 255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLEL-GGNAPCIVF--DDADLNVAVNGALAAKFR 327 (530)
Q Consensus 255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lel-gG~~~~iV~--~dAD~~~a~~~i~~s~f~ 327 (530)
| |.+.-.+|.- -|.||+|+=.|..=|... +..- ...+-..+ -|.+=++|. ++||.++.+.+++..+=.
T Consensus 185 G-GAQAIAAlAyGTetIp~VDkIvGPGN~yV~~A--K~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQAEH 259 (425)
T PRK00877 185 G-GAQAIAALAYGTESIPKVDKIVGPGNIYVTAA--KRLV--FGVVGIDMIAGPSEILVIADETADPDFVAADLLSQAEH 259 (425)
T ss_pred C-CHHHHHHHHcCCCCCCCCcEEECCCcHHHHHH--HHHH--cCCcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHhcc
Confidence 3 4444445543 468999987776654321 1110 01222222 244444443 458999999999887755
Q ss_pred ccCCccccCCeEEE--ehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc
Q 009618 328 NSGQTCVCANRVLV--QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405 (530)
Q Consensus 328 ~~GQ~C~a~~~v~V--~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~ 405 (530)
... .+.++| .+.+.++..+.+.+.+..+. + . ...++++..
T Consensus 260 d~~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r--~----~ia~~sl~~----------- 301 (425)
T PRK00877 260 DPD-----AQSILVTTSEELAEAVAAEVERQLATLP----------------R--A----EIARASLEG----------- 301 (425)
T ss_pred CCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h--H----HHHHHHHHh-----------
Confidence 432 344555 33445555555555554431 0 1 122222211
Q ss_pred CCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceEEEE
Q 009618 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGLVGV 484 (530)
Q Consensus 406 ~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~v~v 484 (530)
+| .|+.++|.||+++++|..-.= -.-|.++|.. .+..+++ +|.|++
T Consensus 302 --------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p~---~~l~~I~nAGaiFl 348 (425)
T PRK00877 302 --------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDPR---ALLDRIRNAGAIFL 348 (425)
T ss_pred --------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCHH---HHHhhcCccceecc
Confidence 11 245669999999999985322 2447778874 4566665 899999
Q ss_pred CCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 485 NEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 485 N~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
..++.. +..+| .+|..|..|.-+...|++.-++
T Consensus 349 G~~tp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 349 GPYTPESLGDYAAGPNHVLP-----TSGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred CCCCchhhhhcccCCCcccC-----CCcceeecCCccHHHhccceeE
Confidence 776541 12334 4667788777899999876544
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=3.2 Score=42.74 Aligned_cols=272 Identities=18% Similarity=0.105 Sum_probs=152.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (530)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 230 (530)
..+..+.+.++.|........ ... ..+|.....++.|+--|++-.|.-||. +.+....||-.+|+.=|+-.+|-..
T Consensus 57 ~ai~~a~~~I~~fh~~q~~~~-~~~--~~~Gv~~g~~~~Pi~rvG~YVPa~~pS-tvLM~~iPAkvAGV~~Iv~~TPp~~ 132 (368)
T PRK13769 57 AAALEAAKSLEALYSRLKPPE-AVD--FYGGVLRSVFWKPVRRAALYVPARYVS-TLVMLAVPARAAGVEEIYVVTPPRG 132 (368)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-eEe--cCCCeEEEEEEeeeeeeEEEeccchHH-HHHHhhccHhhcCCCeEEEeCCCCC
Confidence 345555666665554332211 111 235777778899999999999965553 4456678999999865543332111
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCc-cEEE
Q 009618 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNA-PCIV 308 (530)
Q Consensus 231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~-~~iV 308 (530)
..-.+.-.++.+|+.+ +--+ | |.+.-.++...-+||+|+=.|..-+...=.. .. ..+-..+- |.+ -+|+
T Consensus 133 -i~p~vL~aa~~~Gv~e--Iy~v-G-GAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~-v~---g~V~ID~~AGPSEvlVi 203 (368)
T PRK13769 133 -VTGELLAVAKELGVKG--VLAI-G-GPHGLAYAVFHMGVDMVAGPGGLYVQAAKYV-LS---QYVGIDGIEGPTELVVY 203 (368)
T ss_pred -CCHHHHHHHHHcCCCe--eecc-c-CHHHHHHHhcCCCcCEEECCCcHHHHHHHHH-Hh---CCcCCCCcCCCcceEEE
Confidence 2222333557777764 2222 4 4444346666558999987777655322111 11 12222221 333 3555
Q ss_pred ecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHH
Q 009618 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388 (530)
Q Consensus 309 ~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i 388 (530)
-++||.++.+.+++..+=... ..+.++|..+ .++.++..+++++. +
T Consensus 204 AD~a~p~~vAaDLLaQAEH~~-----~a~~iLvT~s--~~la~~V~~~v~~~---------------------------~ 249 (368)
T PRK13769 204 AEGVPPEVAVRGALAQLEHGP-----TSFAYLLSTD--AELLKAAEEIYRRE---------------------------R 249 (368)
T ss_pred cCCCCHHHHHHHHHHHhhcCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------H
Confidence 556899999888877665432 2344555444 34444444443320 1
Q ss_pred HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC-CCcEEEEEcCCH
Q 009618 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN-AGLAAYIFTNNL 467 (530)
Q Consensus 389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~-~gL~a~v~s~d~ 467 (530)
.. . . + . ..|+.++|.||+++++|..- -.|... +.
T Consensus 250 ~~-----~--------~--~-~-------------------------~~iivv~~leeai~~~N~~APEHLel~--~~-- 284 (368)
T PRK13769 250 TS-----S--------M--G-P-------------------------LEVRKVAGVEEAVRFIDEIAPEHLEVW--GR-- 284 (368)
T ss_pred Hh-----c--------C--C-C-------------------------CeEEEECCHHHHHHHHHhhChHheEee--Cc--
Confidence 00 0 0 0 0 24677899999999999953 334443 32
Q ss_pred HHHHHHHhhcc-ceEEEECCCCCC-------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 468 QRTWRVSEALE-YGLVGVNEGLIS-------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 468 ~~~~~~a~~l~-~G~v~vN~~~~~-------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
+.+..+++ +|.|+++++... +..+| .+|..|..|.-+...|++.-++
T Consensus 285 ---~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~t~ 339 (368)
T PRK13769 285 ---REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLP-----TGGTARWRGIITPLTFMKPIGV 339 (368)
T ss_pred ---HHHHhhCCccCChhcCCchhhhccccCCCCcCC-----CCcceeccCCCcHHHcccceeE
Confidence 22555665 899999664331 12344 4567777776788888775544
|
|
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=3.6 Score=43.23 Aligned_cols=257 Identities=20% Similarity=0.236 Sum_probs=148.3
Q ss_pred CCceeEEEEeeceEEEEECCC-CcchH-HHHHHHhhHhhcCCEEE--eecCCCcHHHHHHHHHHHHHcCCCCccEEeec-
Q 009618 180 PDRRLFVLKQPVGVAGAITPW-NFPLA-MITRKVGPALACGCTVV--VKPSEFTPLTALAAAELALQAGIPPGVVNVVM- 254 (530)
Q Consensus 180 ~g~~~~~~~~P~GVv~~i~p~-n~P~~-~~~~~l~~ALaaGN~VV--lKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~- 254 (530)
+|.....++.|+.-|++-.|. .+|+. +.+....||-.+|+.=| .-|+...-.....+.-..+.+|+.+ +..
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~AA~~~Gv~e----Iy~v 185 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLYCAKKAGVTH----ILKA 185 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHHHHHHcCCCe----eecc
Confidence 566777889999999999996 33432 34456789999998644 3444321012222233557787764 222
Q ss_pred CCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccce---EEeec-CCCccEEEe--cCCCHHHHHHHHHHH
Q 009618 255 GNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKK---VSLEL-GGNAPCIVF--DDADLNVAVNGALAA 324 (530)
Q Consensus 255 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~---~~lel-gG~~~~iV~--~dAD~~~a~~~i~~s 324 (530)
| |.+.-.+|.- -|+||+|+=.|..=+...=.. .. .. +-..+ -|.+=++|. ++||.++++.+++..
T Consensus 186 G-GaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~-v~---G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 186 G-GAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMI-LQ---NSEAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred C-CHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHH-hh---CCCCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 3 4444344443 468999987777654321111 11 11 22222 254444444 458999999998887
Q ss_pred HhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCC
Q 009618 325 KFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGG 402 (530)
Q Consensus 325 ~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg 402 (530)
+=.... .+.++|.. .+.++..+.+.+.++.+. + .+..++++..
T Consensus 261 AEHdp~-----a~aiLvT~s~~la~~V~~~v~~ql~~l~----------------r------~~i~~~sl~~-------- 305 (431)
T PLN02926 261 AEHGPD-----SQVVLVAVGDVDLDAIEEEVEKQCQSLP----------------R------GEIASKALGH-------- 305 (431)
T ss_pred hccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhCC----------------h------HHHHHHHHHC--------
Confidence 755432 33455533 444555555555444431 0 1112222111
Q ss_pred cccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhcc-ceE
Q 009618 403 RRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALE-YGL 481 (530)
Q Consensus 403 ~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~-~G~ 481 (530)
-.|+.++|.||+++++|..-.= -.-|+++|.. .+..+++ +|.
T Consensus 306 ---------------------------------g~iivv~~l~ea~~~~N~~APE-HLei~~~~~~---~~l~~i~nAGa 348 (431)
T PLN02926 306 ---------------------------------SFIVVARDMAEAISFSNLYAPE-HLIVNVEDAE---SWLDKIDNAGS 348 (431)
T ss_pred ---------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhcCHH---HHHhhcCccce
Confidence 1345679999999999985322 2347777774 5666665 899
Q ss_pred EEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 482 VGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 482 v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
|++..++.. +..+| .+|.+|..|.-+...|++.-++
T Consensus 349 iFlG~~sp~a~GDY~aGpNHvLP-----T~G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 349 VFLGRWTPESVGDYASGTNHVLP-----TYGYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred eccCCCCchhhhccccCcCcccC-----CCcceeecCCCcHHHhcceeeE
Confidence 999765541 12344 4567777777788899876544
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=85.22 E-value=7 Score=42.03 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=73.5
Q ss_pred CceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhH
Q 009618 181 DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDI 260 (530)
Q Consensus 181 g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~ 260 (530)
|+.+.....|.|-|+++.+ +....+.+++.+|+.||.+++-+.+.. ++++. .+|..+-..+.-.+
T Consensus 634 GErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~-------aa~~~--~l~~~v~~~~~~~~--- 698 (769)
T COG4230 634 GERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGL-------AALLK--DLPSAVASRIQVAK--- 698 (769)
T ss_pred ccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchH-------HHHHH--hchhhhhhheeecc---
Confidence 7889999999999999876 667888999999999999998765532 22221 25555433332111
Q ss_pred HhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC
Q 009618 261 GDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG 301 (530)
Q Consensus 261 ~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg 301 (530)
.. +.+-.++.+.|.|.++-.+.+.+..+.+..|++.-.+
T Consensus 699 -~~-~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 699 -DW-TADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred -ch-hhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 12 3344578899999999989999877777666655444
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.71 E-value=0.099 Score=55.08 Aligned_cols=142 Identities=16% Similarity=0.092 Sum_probs=95.0
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceE---EEEEeCCHHHHHHHHH
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA---PLLCFKTEEEAIHMAN 452 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~---~i~~~~~~~eai~~~n 452 (530)
.+..+..++...+.+.+.++..++...+.. +.|.++.++...+++.....++ .|++.. .........+.+...+
T Consensus 79 ~~~~~R~~~L~~~Adlie~~~~~lA~~E~~-d~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 79 RDAAERGRLLRKLADLIEQDADVLAALEVL-DNGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CCHHHHHHHHHHHHHHHHhhhHHHhhhccc-ccCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 466788888888888888888888877665 3457788888777777666654 444443 2233344567777788
Q ss_pred cCCCC--cEEEEEc-CCHHHHHHHHhhccceEEEECCCCCCCCC--------CcccCCC------CCCCCCCChHHHHHh
Q 009618 453 DTNAG--LAAYIFT-NNLQRTWRVSEALEYGLVGVNEGLISTEV--------APFGGVK------QSGLGREGSKYGMDE 515 (530)
Q Consensus 453 ~~~~g--L~a~v~s-~d~~~~~~~a~~l~~G~v~vN~~~~~~~~--------~pfGG~~------~SG~G~~~g~~~l~~ 515 (530)
..+.| ...+.|. --.-.+++++-.|.+|+++||.+....|. ...-|.. -+|.|++-|..=..+
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH 235 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASH 235 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhC
Confidence 88999 4555665 34677899999999999999987664431 1111221 377777766655555
Q ss_pred hheee
Q 009618 516 FLEIK 520 (530)
Q Consensus 516 ~~~~k 520 (530)
+--.|
T Consensus 236 ~dv~k 240 (501)
T KOG2450|consen 236 PDVDK 240 (501)
T ss_pred CCCce
Confidence 44433
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 530 | ||||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-163 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-163 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-156 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-154 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-148 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-147 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 2e-99 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 5e-95 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-93 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 7e-91 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-90 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 4e-90 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 9e-89 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 6e-88 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 7e-88 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 5e-86 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 4e-85 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 7e-85 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 1e-84 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-84 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-84 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 5e-84 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-83 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 1e-83 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 2e-83 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-83 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-83 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 3e-83 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 4e-83 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-83 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 5e-83 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-82 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 2e-82 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 2e-82 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-82 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 3e-82 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 6e-82 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 2e-81 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 9e-81 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-80 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 3e-80 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 8e-80 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-79 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-79 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-79 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-78 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 8e-77 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 5e-76 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-75 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-75 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 8e-73 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 2e-71 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 3e-69 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 7e-68 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 1e-67 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 2e-65 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 6e-65 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 5e-64 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 1e-63 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 3e-63 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 7e-63 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-56 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 3e-56 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-56 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-54 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-54 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-54 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 5e-53 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 1e-50 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-50 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-50 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-49 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 7e-46 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-44 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 1e-42 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 6e-42 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-40 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 3e-38 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 4e-34 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 4e-31 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-29 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 3e-26 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-25 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-25 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 7e-25 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 3e-17 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 3e-17 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-17 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 4e-17 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 9e-17 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 5e-16 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-08 |
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 0.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 0.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 0.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 0.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 0.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 0.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 0.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 0.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 0.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 0.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 0.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 0.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 0.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 0.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 0.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 0.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 0.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 0.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 0.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 0.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 0.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 0.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 0.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 0.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-165 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-150 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-142 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-122 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-119 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 1e-114 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-111 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-105 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 3e-89 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 6e-88 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 6e-79 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 |
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 914 bits (2366), Expect = 0.0
Identities = 275/480 (57%), Positives = 364/480 (75%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+L DS L R Q LI G+W+DA +G+ ++V NPA G+ + +V MG ET+ AI +A A
Sbjct: 1 KLNDSNLFRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRAL 60
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+W LTA ER+ LR W++L+M H+++L +L+TLEQGKPL EA GE+ Y A FIE++AE
Sbjct: 61 PAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAE 120
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KR+YG+ IP D+RL V+KQP+GV AITPWNFP AMITRK GPALA GCT+V+KP
Sbjct: 121 EGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKP 180
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TP +ALA AELA++AG+P GV NVV G+A +G+ L ++P VRK++FTGST +G++L
Sbjct: 181 ASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL 240
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M A +KKVSLELGGNAP IVFDDADL+ AV GALA+KFRN+GQTCVCANR+ VQ+G+
Sbjct: 241 MEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGV 300
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y++FA+ +A+ L +GDG GV GPLI++ A+ KVE + DA+ KGA+V+ GG+ H
Sbjct: 301 YDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAH 360
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
G F++PT+L +V + VS+EE FGP+APL FK E + I ANDT GLAAY +
Sbjct: 361 ERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYAR 420
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+L R +RV EALEYG+VG+N G+IS EVAPFGG+K SGLGREGSKYG++++LEIKY+C+G
Sbjct: 421 DLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 911 bits (2358), Expect = 0.0
Identities = 273/480 (56%), Positives = 361/480 (75%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
++D LLR Q IGG+W A T EV +PATGE + V MG ET AI +A A+
Sbjct: 4 SMKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAW 63
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W TA ER+ LR+W+DL++A+ ++L ++T EQGKPL EA GE+ Y A FIE++AE
Sbjct: 64 AGWRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAE 123
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
E KRV G+ +P ++R+ V+K+P+GV AITPWNFP AMI RKVGPALA GC +VVKP
Sbjct: 124 EGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKP 183
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+E TP +ALA A LA +AG+P GV++VV+G+ IG + ++P VRK++FTGSTAVG+ L
Sbjct: 184 AESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLL 243
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
MA +A TVKK++LELGGNAP IVFDDADL+ AV GA+A+K+RN+GQTCVC NR V E +
Sbjct: 244 MAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERV 303
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
Y+ FAD + AV LKVG G G GPLIN+AA++KVE+ + DA++KGA ++ GG+RH
Sbjct: 304 YDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRH 363
Query: 406 SLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465
+LG F+EPTVL+ VK +M V++EE FGP+APL F +EEE + +ANDT GLAAY+++
Sbjct: 364 ALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSR 423
Query: 466 NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
++ R WRV+EALEYG+VG+N GLIS EVAPFGGVKQSGLGREGS YG+D+++ IKY+C+
Sbjct: 424 DIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 906 bits (2344), Expect = 0.0
Identities = 282/500 (56%), Positives = 364/500 (72%), Gaps = 2/500 (0%)
Query: 26 QSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIAN 85
+ + + L+D LL++Q L+ G+WIDA DG T++V NPA G VI
Sbjct: 4 HHHHHMGTLEAQTQGPGSMLALKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGT 63
Query: 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145
V + K+AI ++ A + W+ TA ER+ LRKW+DL++A+ +++ ++T EQGKP
Sbjct: 64 VPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKP 123
Query: 146 LKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLA 205
L EA GEV Y A FIE++AEEAKRVYG+ IPA +RL V++QPVGV AITPWNFP A
Sbjct: 124 LAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAA 183
Query: 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALL 265
MITRK PALA GCT++V+P++ TPLTALA LA +AGIP GV+ +V G A +IG L
Sbjct: 184 MITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELT 243
Query: 266 TSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAK 325
++ VRK++FTGST VG+ LMA A T+K++SLELGGNAP IVFDDADL+ AV+GA+ +K
Sbjct: 244 SNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSK 303
Query: 326 FRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVE 385
+RN+GQTCVCANR+ VQ G+Y+KFA+ + VK LKVG+G GVV GP+I + A+ KV+
Sbjct: 304 YRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVK 363
Query: 386 TFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445
+EDAVSKGAK++ GG+ LG F+EP +L+ V S+MLV++EE FGP+APL F TEE
Sbjct: 364 AHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEE 421
Query: 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG 505
E I ANDT GLAAY +T N R RVSEALEYG+VG N GLIS EVAPFGGVKQSGLG
Sbjct: 422 EVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLG 481
Query: 506 REGSKYGMDEFLEIKYVCLG 525
REGSKYG++E+LE KY+C
Sbjct: 482 REGSKYGIEEYLETKYICSA 501
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 901 bits (2331), Expect = 0.0
Identities = 280/486 (57%), Positives = 364/486 (74%), Gaps = 6/486 (1%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+ LLRT +GG+W+ A T V +PA+G + V+ G +E + A+ +A++AF
Sbjct: 4 AGLSAALLRTDSFVGGRWLPA--AATFPVQDPASGAALGMVADCGVREARAAVRAAYEAF 61
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W +++A ERS LRKWY+L++ +K++L ++IT E GKPLKEA GE+ Y A F+E+++E
Sbjct: 62 CRWREVSAKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSE 121
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
EA+RVYG+II DRR VLKQP+GVA ITPWNFP AMITRKVG ALA GCTVVVKP
Sbjct: 122 EARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKP 181
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVV---MGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+E TP +ALA AELA QAGIP GV NV+ NA ++G+A+ T P V KI+FTGST G
Sbjct: 182 AEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTG 241
Query: 283 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 342
K L+ AA +VK+VS+ELGG AP IVFD A+++ AV GA+A+KFRN+GQTCVC+N+ LVQ
Sbjct: 242 KILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQ 301
Query: 343 EGIYEKFADAFSKAV-KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
GI++ F AF++A+ KNL+VG+GF EG QGPLIN+ A+EKVE V DAVSKGA V+ G
Sbjct: 302 RGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTG 361
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G+RH LG F+EPT+L NV +ML + EE FGP+AP++ F TEEEAI +AN + GLA Y
Sbjct: 362 GKRHQLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGY 421
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521
++ + + WRV+E LE G+VGVNEGLIS+ PFGGVKQSGLGREGSKYG+DE+LE+KY
Sbjct: 422 FYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKY 481
Query: 522 VCLGDM 527
VC G +
Sbjct: 482 VCYGGL 487
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 900 bits (2329), Expect = 0.0
Identities = 212/484 (43%), Positives = 286/484 (59%), Gaps = 1/484 (0%)
Query: 46 RLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
+ L G IGG+W D+ G T +V+NPATG VIA V M ++ A+ + A
Sbjct: 3 MIESPLLENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSAL 62
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
+ R K L D L ++EE+G+++ +E GKP KEA GEVDY A F ++ A+
Sbjct: 63 RLTNPWPIETRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAK 122
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
+ IP D V +PVGV G I PWNFP+ MI +K+ ALA GC V+KP
Sbjct: 123 HISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKP 182
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
+ TPLT +A + + +P G+VN+VMG A IG L V ++FTGST VG+KL
Sbjct: 183 ASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKL 242
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
+ A VKK++LELGGNAP IVFDDADL A + +A KFR GQTCVCANR+ V E +
Sbjct: 243 IVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKV 302
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+ F ++ V + VGDG +G+ GPLINK +KV+ ++DA+ KGA ++ G +
Sbjct: 303 ADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPA 362
Query: 406 SLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
LG F+ PTV+ V EM +EE FGP+ P+ F+TEEE I NDT GLA+Y+FT
Sbjct: 363 ELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFT 422
Query: 465 NNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ +R RV+ L +G VG N G T APFGG+K SG+GREG G+ EF+E + V
Sbjct: 423 ADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPR 482
Query: 525 GDMN 528
G
Sbjct: 483 GFAE 486
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 895 bits (2316), Expect = 0.0
Identities = 178/486 (36%), Positives = 273/486 (56%), Gaps = 4/486 (0%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
++D IGG+++ + + T+++ +P+TG+VI + + ++A+ A A
Sbjct: 5 VQDLHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK 64
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
+W+KLTA R LR + + + +K L ++ EQGK L A EVD A FI++ +
Sbjct: 65 AWAKLTARTRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDN 124
Query: 167 AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226
A + G+I+P+ D ++++ K P GV IT WNFPLA+ RK+GPAL G T+V+KP+
Sbjct: 125 ALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPT 184
Query: 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286
+ TPL +A +AG+P GV+NV+ G +G L SP + IT TGST GK++
Sbjct: 185 QETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244
Query: 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY 346
+A + V LELGG AP +V DDADL+ A AL +F N GQ C C R+ V +Y
Sbjct: 245 KTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVY 304
Query: 347 EKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
++F F VK LKVGD GP N+ ++ ++ V +A+ +GA V GG+ +
Sbjct: 305 DEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTAT 364
Query: 407 L----GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYI 462
+ G +YEPTVL +VK + +V EE FGP+ P++ + E+AI ND+ GL+AY+
Sbjct: 365 VEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYV 424
Query: 463 FTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
T + + LE G V +N G+ G KQSG G E K+G++++LE K V
Sbjct: 425 HTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484
Query: 523 CLGDMN 528
+ +
Sbjct: 485 YINEAE 490
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 881 bits (2278), Expect = 0.0
Identities = 186/477 (38%), Positives = 277/477 (58%), Gaps = 1/477 (0%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S ++ I G+++ ++V NPAT VI+ + ++ + AI +A A W
Sbjct: 2 SVPVQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWE 61
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
L A ER+ LRK + E+ LI E GK + A EV + A +I++ AE A+R
Sbjct: 62 ALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARR 121
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
GEII + P + + K+ +GV I PWNFP +I RK+ PAL G T+V+KPSEFT
Sbjct: 122 YEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFT 181
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P A+A A++ + G+P GV N+V+G +G L +P+V ++ TGS + G+K+MA A
Sbjct: 182 PNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241
Query: 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
A + KV LELGG AP IV DDADL +AV + ++ NSGQ C CA RV VQ+GIY++F
Sbjct: 242 AKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQF 301
Query: 350 ADAFSKAVKNLKVGDGFGEG-VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
+ +A++ ++ G+ + GPLIN AALE+VE V AV +GA+V GG+
Sbjct: 302 VNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGK 361
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+Y PT+L +V+ EM + EE FGPV P++ F T E+AI MAND++ GL + I+T NL
Sbjct: 362 GYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLN 421
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+ + L++G +N G ++SG+G K+G+ E+L+ + V L
Sbjct: 422 VAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 828 bits (2142), Expect = 0.0
Identities = 162/485 (33%), Positives = 243/485 (50%), Gaps = 12/485 (2%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN 106
+ L G+W+++ G+ + + PA+G + ++ + +E DAI A DA
Sbjct: 4 ALQTEQFNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK 63
Query: 107 SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE 166
W ER L W DLL KE +G+LI E KP K A+GEV A I A+E
Sbjct: 64 IWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADIIRHTADE 123
Query: 167 AKRVYGEIIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTV 221
A R+ GE + + V ++P+GV AI+P+N+P+ + K+ PAL G TV
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTV 183
Query: 222 VVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
V KP+ L+ + E AG P G++ VV G IGD L+ P + ITFTG T
Sbjct: 184 VFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTT 243
Query: 282 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
G+++ A + V LELGG P IV DDADL + + ++ F SGQ C RV V
Sbjct: 244 GERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFV 301
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
Q+ + ++ + V+ L VG + P+I++ + ++ ++DA+ GA +L G
Sbjct: 302 QDSVADQLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSG 360
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
+R PT+L +V M V+ EE FGPV P++ K EAI ++N ++ GL A
Sbjct: 361 NKRQG---NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQAS 417
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIK 520
IFT + R + + LE G V +N + PF GVK+SGLG +G K + +
Sbjct: 418 IFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477
Query: 521 YVCLG 525
L
Sbjct: 478 VTVLN 482
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 815 bits (2107), Expect = 0.0
Identities = 177/473 (37%), Positives = 262/473 (55%), Gaps = 17/473 (3%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
I GKWI+ + ++V NP + EVI + + +E K+AI +A L +R
Sbjct: 3 FIDGKWIN---REDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY 59
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
L + KEEL +++ ++ GKP+K+A EV+ + A K E+IP+
Sbjct: 60 NILMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS 119
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
DR +F ++PVG+ GAITP+NFPL + K+ PA+A G +V PS PL + A
Sbjct: 120 --DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELA 177
Query: 238 ELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
++ A +P GV N++ G +GD ++ + +V I+FTGS+ VG+ + A
Sbjct: 178 KIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG--F 235
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 353
KK++LELGG P IV DADLN AVN + F +GQ C+ +LV E I +KF + F
Sbjct: 236 KKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMF 295
Query: 354 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYE 413
K L VG+ E GPLI+ E VE VE A+ +G K+LLGG+R +
Sbjct: 296 VNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK---ALFY 352
Query: 414 PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRV 473
PT+L V + ++ + E F PV P++ EEE I +AN T GL + IFTN++ ++ +
Sbjct: 353 PTIL-EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINKSLKF 410
Query: 474 SEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
+E LE+G V +N+ L + PFGGVK+SGLGREG KY M+E IK + +
Sbjct: 411 AENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 814 bits (2105), Expect = 0.0
Identities = 153/479 (31%), Positives = 265/479 (55%), Gaps = 6/479 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAA 114
+ I GKW G+T ++ NP VI S GK+ +DA A A W+K T
Sbjct: 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTE 66
Query: 115 ERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-E 173
+R L+K L +++++ +I E G + ++ E++ ++ + G +
Sbjct: 67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVK 126
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
+P+ + + + + P+GV +I+P+NFP+ + R + PA+A G +VV KP T ++
Sbjct: 127 EVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISG 186
Query: 234 LAA-AELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
A+ AG+P GV+NV++ + +IGD +LT+P R I+FTGSTAVG+ + A
Sbjct: 187 GTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
K+++LELGGN P V DAD++ AV+ A+ KF + GQ C+ NR++V + +Y++F +
Sbjct: 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEK 306
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412
F+ VK L GD V GPLIN+ +EK +E A + G ++ + G+R
Sbjct: 307 FTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVG---NVL 363
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
P V + +++ E+F P+A ++ +++EAI MANDT GL++ +FT++L++ +
Sbjct: 364 TPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEK 423
Query: 473 VSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 530
+ ++ G+ VN+ ++ FGG K SG+GR G+ + ++EF K++ + RK
Sbjct: 424 FALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQKQYRK 482
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 813 bits (2102), Expect = 0.0
Identities = 156/478 (32%), Positives = 248/478 (51%), Gaps = 14/478 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + + G+W + ++++ PA+G + +V M +E +SA A +W L+
Sbjct: 4 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSY 61
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
ER+ L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE
Sbjct: 62 IERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGE 121
Query: 174 IIP-----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEF 228
++ A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP
Sbjct: 122 VLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQ 181
Query: 229 TPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
++ L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++
Sbjct: 182 GSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241
Query: 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
A ++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++
Sbjct: 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 349 FADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLG 408
+ + V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 300 LVEKIREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG-- 356
Query: 409 MTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+
Sbjct: 357 -NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFP 415
Query: 469 RTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525
R + ++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 416 RAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 798 bits (2063), Expect = 0.0
Identities = 149/486 (30%), Positives = 243/486 (50%), Gaps = 16/486 (3%)
Query: 49 DSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF-NS 107
G+ + G+W + G+ +EV +P IA V +E + + F S
Sbjct: 13 KGGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWS 70
Query: 108 WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEA 167
+ ER LRK D++ + + +++ + GKP AVGEV + +
Sbjct: 71 ARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDL 130
Query: 168 KRVYGEIIPATLP----DRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223
K++ G+ IP + V ++P+GV AITP+N+PL K+ + G VVV
Sbjct: 131 KKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVV 190
Query: 224 KPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283
KPS PL A A + L AG PP + ++ + ++ +V ++FTGST VG+
Sbjct: 191 KPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGE 249
Query: 284 KLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE 343
+++ VK+ +ELGG P IV +DADL++A + + +GQ C VL +
Sbjct: 250 RVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAER 307
Query: 344 GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGR 403
+Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGR
Sbjct: 308 PVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGR 367
Query: 404 RHSLGMTFYEPTVL---SNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 460
R LG T+ +PT + ++ +M++ + EVF PVA + K ++AI +AN GL A
Sbjct: 368 R--LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDA 425
Query: 461 YIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEI 519
+F ++ + R LE G + +N+ PFGG K+SG+ REG Y ++
Sbjct: 426 AVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 485
Query: 520 KYVCLG 525
K +
Sbjct: 486 KTIVFN 491
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 796 bits (2057), Expect = 0.0
Identities = 165/485 (34%), Positives = 261/485 (53%), Gaps = 7/485 (1%)
Query: 44 TDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 103
+G+ T+ LIGG+W++ + NP VIA + A +A
Sbjct: 2 VVTATFAGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKK 61
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFY 163
A W+ AAERS + + +LL H+EE+ + + E G +A E+ +
Sbjct: 62 AQAEWAATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKES 121
Query: 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVV 223
A RV+G I P+ P + V + GV G I+PWNFPL + R V PALA G VV+
Sbjct: 122 ASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVI 181
Query: 224 KPSEFTPLTALA-AAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
KP+ TP+T A + +AG+P GV++ V G +IGD +T + I+FTGST VG
Sbjct: 182 KPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVG 241
Query: 283 KKLM--AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVL 340
+++ A G +K V+LELGGNAP +V DAD++ A A F + GQ C+ NRV+
Sbjct: 242 RRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVI 301
Query: 341 VQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLL 400
V ++++F + F +AVKN+ GD EG + GP+IN + L ++ +E A +GA V +
Sbjct: 302 VDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQV 361
Query: 401 GGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAA 460
G P V S+V S+M ++REE+FGP+ +L E A +AN ++ GL+A
Sbjct: 362 EGPIEG---RLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSA 418
Query: 461 YIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLEI 519
+++ ++ R + + ++ G+V +N+ ++ E FGG K SGLGR + ++EF
Sbjct: 419 AVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTD 478
Query: 520 KYVCL 524
+++ +
Sbjct: 479 RWIGI 483
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 753 bits (1946), Expect = 0.0
Identities = 142/485 (29%), Positives = 237/485 (48%), Gaps = 11/485 (2%)
Query: 47 LRDSGLLR-TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF 105
L++ GL +G+ G W G+ + + PA E IA V + ++ + A +A+
Sbjct: 15 LKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAW 72
Query: 106 NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165
W+ + A +R + +R+ D L + LG L++LE GK L E VGEV ++
Sbjct: 73 KIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEYVDICDYAVG 132
Query: 166 EAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ + G I+P+ L PVG+ G IT +NFP+A+ A+ CG + K
Sbjct: 133 LSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKG 192
Query: 226 SEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAV 281
+ T L ++A ++ + +P + ++ G DIG A+ +V ++FTGST V
Sbjct: 193 APTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQV 251
Query: 282 GKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
GK++ + LELGGN I F+DADL++ V AL A +GQ C A R+ +
Sbjct: 252 GKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFI 311
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
E I+++ + KA ++VG+ + V+ GPL K A+ VE+A +G V+ G
Sbjct: 312 HESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYG 371
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G+ + EPT+++ + + ++ E F P+ + F+ EEE N+ GL++
Sbjct: 372 GKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSS 431
Query: 462 IFTNNLQR--TWRVSEALEYGLVGVNEGLISTEV-APFGGVKQSGLGREGSKYGMDEFLE 518
IFT +L R W + + G+V VN E+ FGG K +G GRE +++
Sbjct: 432 IFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMR 491
Query: 519 IKYVC 523
Sbjct: 492 RSTCT 496
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 744 bits (1923), Expect = 0.0
Identities = 141/473 (29%), Positives = 224/473 (47%), Gaps = 8/473 (1%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWS 109
S + + I G+W+ G+TLE +P V+ + + A+ +A +AF +W+
Sbjct: 1 SNAMMSTHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWA 59
Query: 110 KLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR 169
+ +R + L ++ L + +EL ++I E GKPL E+ EV + + +
Sbjct: 60 RRPLEQRIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRE 119
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
GE L D + +P GV P+NFP + + PAL G VV KPSE T
Sbjct: 120 RTGEKSG-PLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELT 178
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
P A + +QAG+P GV+N+V G + G AL + + FTGS+ G L +
Sbjct: 179 PKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQF 237
Query: 290 AG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIY-E 347
G K ++LE+GGN P +V + ADL+ AV + + F ++GQ C CA R+LV +G + +
Sbjct: 238 GGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGD 297
Query: 348 KFADAFSKAVKNLKVGDGFGEGVVQ-GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS 406
L+VG + G +I+ +A E + E + KGA+ LL +
Sbjct: 298 ALLARLVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI 357
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
G P +L +V + EE FGP+ ++ + AI AN T GLAA + +++
Sbjct: 358 DGAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDS 416
Query: 467 LQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLE 518
+R + G+V N+ L + APFGG+ SG R + Y D
Sbjct: 417 RERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCAY 469
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 707 bits (1828), Expect = 0.0
Identities = 162/459 (35%), Positives = 245/459 (53%), Gaps = 2/459 (0%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLM 128
NPATG+ +A + +E + A+S A F W + A+R++ LR L
Sbjct: 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALR 65
Query: 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK 188
AH EE+ Q IT E GKP+K+A EV A ++YAE + P + +++ +
Sbjct: 66 AHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEY 124
Query: 189 QPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPG 248
+P+GV AI PWNFPL + R P L G + ++K + A A + +AG P G
Sbjct: 125 RPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAG 184
Query: 249 VVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIV 308
V V N + ++ P++ +T TGS G + A A +KK LELGG+ P IV
Sbjct: 185 VYGWVNANNEGVSQ-MINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIV 243
Query: 309 FDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368
+DADL +AV A+A +++N+GQ C A R +V+EGI + F D F A LK+GD E
Sbjct: 244 LNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVE 303
Query: 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSR 428
GP+ +++ V+ +V++GA++LLGG + + +Y TVL++V +M R
Sbjct: 304 ENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFR 363
Query: 429 EEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGL 488
+E+FGPVA + K A+ +AND+ GL+A IFT + ++ LE G V +N
Sbjct: 364 QELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYS 423
Query: 489 ISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 527
S FGGVK+SG GRE S +G+ EF ++ V +
Sbjct: 424 ASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 700 bits (1810), Expect = 0.0
Identities = 137/460 (29%), Positives = 226/460 (49%), Gaps = 2/460 (0%)
Query: 71 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130
+ NP T E A+ K+ +AI+ A + W A R++ L + L H
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEH 64
Query: 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQP 190
++EL +++TLE GK L E+ EV+ +YA+ + + + LKQ
Sbjct: 65 EDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQS 123
Query: 191 VGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVV 250
GV A PWNFPL + R P G +++K + P +A A++ +AG P G +
Sbjct: 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL 183
Query: 251 NVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310
+ + + D ++ P+++ + TGS G + A +KK ++ELGGN IV D
Sbjct: 184 INLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242
Query: 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370
DAD V N A+ N GQ C + R++V++ Y++ NLK GD
Sbjct: 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADT 302
Query: 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREE 430
P+ ++ A EK+E V++A+ GAKV F+ PT+L+++ + V +E
Sbjct: 303 TLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKE 362
Query: 431 VFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS 490
VFGP+A + + + AI +AND++ GL + + +++ R +VS +E G+ +N I+
Sbjct: 363 VFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRWIT 422
Query: 491 TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDMNRK 530
+ PFGG+K+SG GRE S G+ F+ V N +
Sbjct: 423 SGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVTKNNQ 462
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 602 bits (1555), Expect = 0.0
Identities = 184/476 (38%), Positives = 287/476 (60%), Gaps = 6/476 (1%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS--WSK 110
L + I G+W+++ + T ++ NP EVI VS ++ + AI +A AF S WS+
Sbjct: 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQ 90
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV 170
TA R K +R D + H+E L +L TL+ GK L+E+ ++D ++A A +
Sbjct: 91 ETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKD 150
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
GE+I + +PD ++K+PVGV ITPWN+PL + K+ PALA GC++V+KPSE TP
Sbjct: 151 GGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITP 210
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
LT + EL + G P G +N+++G ++GD + +V ++FTG GK +M AA
Sbjct: 211 LTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270
Query: 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFA 350
V ++LELGG P I+FDDAD +AV+ AL + ++GQ C +R+LVQ I +KF
Sbjct: 271 NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFE 330
Query: 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT 410
A VK +K+G+GF GP+I+ K+E++++ A ++GA + +GG+R
Sbjct: 331 QALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDL 390
Query: 411 ----FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
F+EPTV++N + M + +EEVFGPV + F+TE+EAI +AND+ GLA +F+ +
Sbjct: 391 KDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKD 450
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ + RV+ L+ G V +N+ AP+GG KQSG+GRE K G++E+L K++
Sbjct: 451 IGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHI 506
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 602 bits (1554), Expect = 0.0
Identities = 194/492 (39%), Positives = 284/492 (57%), Gaps = 4/492 (0%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKET 94
+S + ++ R R Q L+ GK +DA G T++ +P GEV+ +
Sbjct: 4 LSNFIAPDSNDPRLRIKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDV 63
Query: 95 KDAISSAFDAFNS--WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A AF++ W +++ AERS+ + K DL++A +EEL + +LE GKP+ +A GE
Sbjct: 64 RKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGE 123
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
+ + A + A +A+ + G+ DR VL++PVGV G ITPWNFP + + +V
Sbjct: 124 IGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVP 183
Query: 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRK 272
A+ GCTVV+KPSEFT T++ AELA +AGIP GV NVV G G L P V
Sbjct: 184 WAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDM 243
Query: 273 ITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 332
+ FTGS VG KL AA TVK+V LELGG P IVF DADL+ A +G + N+GQ
Sbjct: 244 VAFTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQC 303
Query: 333 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392
C+ +R+LVQEGI + + + + GD E G +I++A EKV ++V +
Sbjct: 304 CISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGI 363
Query: 393 SKGAKVLLGGRRHSLGM-TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451
+ GA++LLGG R +Y PTV + V +M ++REE+FGPV L FKT +EA+ +A
Sbjct: 364 TSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALA 423
Query: 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKY 511
N T GL+A +++ NL+ + + G +N + T P GG K+SGLGRE +Y
Sbjct: 424 NATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRY 483
Query: 512 GMDEFLEIKYVC 523
G DE+ + K V
Sbjct: 484 GFDEYSQFKGVH 495
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 594 bits (1535), Expect = 0.0
Identities = 192/480 (40%), Positives = 281/480 (58%), Gaps = 10/480 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SW 108
Q I G W K + V NPAT +I ++ ++ A+++A A W
Sbjct: 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADW 66
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+ + A R++ LR + K EL +L +++ GKPL EA ++D A E+YA+ A+
Sbjct: 67 ATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAE 126
Query: 169 RVYGE-IIPATLPDRRLF--VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKP 225
++ P +LP VL++P+GV G ITPWN+P+ M T KV PALA GC ++KP
Sbjct: 127 KLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186
Query: 226 SEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285
SE LT L E+ + G+PPGV+N++ G P+ G L T P V K+ FTGS+A G K+
Sbjct: 187 SELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246
Query: 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI 345
M AA VK VSLELGG +P +VF+D DL+ A A+ F +GQ C +R+++ E I
Sbjct: 247 MTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESI 306
Query: 346 YEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH 405
+F + K +KN+K+ D EG GP++++ EK+ FV +A S+GA +L GG R
Sbjct: 307 ATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRP 366
Query: 406 SLGMT--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 463
F EPT++++V + M + REEVFGPV + F TEEEAI +ANDT GL A +
Sbjct: 367 EHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVI 426
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
+N+L+R RV++A + G+V VN AP+GGVK+SG GRE ++G+D +L +K V
Sbjct: 427 SNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 588 bits (1518), Expect = 0.0
Identities = 185/483 (38%), Positives = 261/483 (54%), Gaps = 11/483 (2%)
Query: 55 TQGLIGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+
Sbjct: 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAG 79
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
ERS+ + + ++ ++ + +L + GK + EA ++D + IE+YA A + G+
Sbjct: 80 IERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQ 139
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTA 233
I + ++P+GV I WN+P + K PALACG VV KPS TP+T
Sbjct: 140 HIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTG 198
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ AE+ +AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TV
Sbjct: 199 VILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257
Query: 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAF 353
K V+LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F +
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 354 SKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT--- 410
K K + VGD G LI+K L+KV FV A +GA+VL GG +
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 411 ---FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDI 437
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LG 525
R RV+ LE G +N IS PFGG K SG GRE + +D + ++K V +G
Sbjct: 438 SRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMG 497
Query: 526 DMN 528
D++
Sbjct: 498 DVD 500
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 587 bits (1517), Expect = 0.0
Identities = 173/482 (35%), Positives = 266/482 (55%), Gaps = 4/482 (0%)
Query: 44 TDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFD 103
T + +GL++ + LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A
Sbjct: 13 TSLYKKAGLMQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADA 71
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEF 162
AF W + T R++ L K D++ + + +L + GKPL A E+ F
Sbjct: 72 AFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRF 131
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
+A A+ + G L + + P+GV +I PWN+PL M K+ PALA G VV
Sbjct: 132 FAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVV 191
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+KPSE TPLTAL AELA P GVVN++ G +GD L P+VR ++ TGS A G
Sbjct: 192 LKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250
Query: 283 KKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQ 342
+ +++ A ++K+ +ELGG AP IVFDDAD+ V G + N+GQ C A R+ Q
Sbjct: 251 EHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQ 310
Query: 343 EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKG-AKVLLG 401
+GIY+ + AV LK G E GPL + A LE+V VE+A + G KV+ G
Sbjct: 311 KGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITG 370
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G + +Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+
Sbjct: 371 GEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASS 430
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521
++T ++ R RVS L+YG VN + P GG K SG G++ S YG++++ +++
Sbjct: 431 VWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRH 490
Query: 522 VC 523
V
Sbjct: 491 VM 492
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 583 bits (1505), Expect = 0.0
Identities = 171/490 (34%), Positives = 262/490 (53%), Gaps = 4/490 (0%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETK 95
S G+ T+ L ++ TQ LIG ++ + NP TG I +++ +
Sbjct: 7 HSSGVDLGTENLYFQSMMDTQLLIGSRFEAG-TEAEEHILNPRTGAGIIDLAEASHAQID 65
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVD 154
A+ +A AF WS+ T AERS L K D + +E L L GKP+ E+
Sbjct: 66 AAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELP 125
Query: 155 YGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214
F+A + ++ LP + + P+G+ G+I PWN+PL M+ K+ PA
Sbjct: 126 AIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPA 185
Query: 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKIT 274
+ G TVV KPSE TPLTAL A L +P GVVNV+ G +G+AL+ P+V ++
Sbjct: 186 IGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVS 244
Query: 275 FTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV 334
TG A GKK++A AA TVK+ LELGG AP IV+ DADL VNG + N+GQ C
Sbjct: 245 ITGDIATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCT 304
Query: 335 CANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394
A R+ + GIYEK + AV ++ GPLI++ ++V +FVE A +
Sbjct: 305 AACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQ 364
Query: 395 G-AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453
++ GGR S F++PTV++ E + R EVFGPV + F +++A+ AND
Sbjct: 365 KHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWAND 424
Query: 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGM 513
++ GLA+ ++T ++ + R + L+YG +N + T P GG+KQSG G++ S Y +
Sbjct: 425 SDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYAL 484
Query: 514 DEFLEIKYVC 523
+++ ++++
Sbjct: 485 EDYTAVRHIM 494
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 582 bits (1503), Expect = 0.0
Identities = 194/494 (39%), Positives = 272/494 (55%), Gaps = 6/494 (1%)
Query: 36 MSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETK 95
S M V L + T+ I +W + GK V NPAT E + V ++
Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVD 61
Query: 96 DAISSAFDAFNS---WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VG 151
A+ +A AF W + A+ER + L K DL+ + L + + GK A +
Sbjct: 62 KAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLM 121
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
++ K + + A A ++ G IP + + +PVGV G I PWNFPL M K+
Sbjct: 122 DLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
GPAL+CG TVVVKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V
Sbjct: 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240
Query: 272 KITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
K+ FTGST VGK + A +K+VSLELGG +PCIVF DADL+ AV A F + G
Sbjct: 241 KVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQG 300
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
Q C+ A+R+ V+E IY++F + K +G+ GV QGP I+K EK+ +E
Sbjct: 301 QCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIES 360
Query: 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450
+GAK+ GG F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I
Sbjct: 361 GKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKR 420
Query: 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSK 510
AN+T GL+A IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +
Sbjct: 421 ANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGE 480
Query: 511 YGMDEFLEIKYVCL 524
YG E+ E+K V +
Sbjct: 481 YGFHEYTEVKTVTI 494
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 582 bits (1502), Expect = 0.0
Identities = 174/482 (36%), Positives = 263/482 (54%), Gaps = 10/482 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ I G +++ G E PATGE+IA + + AI+SA A W+ ++
Sbjct: 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSP 73
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAK-RVY 171
R + L++ D++ + L L TL+ GKP++E V + GA EF+ A +
Sbjct: 74 MARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALN 133
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G+ IP L + + P+GV I WN+P + K PAL G +V KPSE TPL
Sbjct: 134 GDYIP--LGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPL 191
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
AL AE+ ++AG+P G+ NV+ G+ G L+ P V K++ TGS G+K+ A AAG
Sbjct: 192 GALKIAEILIEAGLPKGLFNVIQGDRD-TGPLLVNHPDVAKVSLTGSVPTGRKVAAAAAG 250
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
+K V++ELGG +P IVFDDAD+ AV GA+ F +SGQ C RV VQ+ +F +
Sbjct: 251 HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLE 310
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT- 410
+ + + +GD GPL++KA EKV +++E ++GA ++ GG +
Sbjct: 311 NLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGE 370
Query: 411 --FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+ +PTV ++V +M ++REE+FGPV +L F E+E + AN T GLA +FT +L
Sbjct: 371 GAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLA 430
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGD 526
R RV + LE G + +N + PFGG KQSG GRE S ++ + E+K V G
Sbjct: 431 RAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVSTGK 490
Query: 527 MN 528
++
Sbjct: 491 VD 492
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 578 bits (1492), Expect = 0.0
Identities = 169/474 (35%), Positives = 252/474 (53%), Gaps = 12/474 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKE-TKDAISSAFDAFNSWSKLT 112
T+ I G+W+++ +T+EV NPAT EVI V+ G K A+ +A D + + +
Sbjct: 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVA-KGNKADVDKAVEAADDVYLEFRHTS 65
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ER L K K+++ Q IT E G PL + G +
Sbjct: 66 VKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYE 125
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
E V+K+ +GV+G ITPWNFP + K+ A A G VV+KPSE TP
Sbjct: 126 FEERRGDD-----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
A+ AE+ + G+P GV N+V G+ +G+ L P+VR ++FTGS G K+M AA
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAK 240
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
KKVSLELGG +P IV DD D+ A N+GQ C RVLV I + F
Sbjct: 241 DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLA 300
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT- 410
+ ++VG+ +G GP+I+K ++V+ ++ + +GA++ GG G+
Sbjct: 301 ELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEK 360
Query: 411 --FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
F PT+ NV ++M +++EE+FGPV ++ + +EAI +ANDT GLA Y+ + +
Sbjct: 361 GYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKE 420
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+V+ ++E G V +NE + PFGG KQSGLGRE YG++EFLE+K +
Sbjct: 421 TLHKVARSIEAGTVEINEAGRKPD-LPFGGYKQSGLGREWGDYGIEEFLEVKSI 473
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 579 bits (1495), Expect = 0.0
Identities = 179/502 (35%), Positives = 275/502 (54%), Gaps = 13/502 (2%)
Query: 33 SRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGK 92
R + +++ + R I G+++ + G+T +PAT EV+ + GG+
Sbjct: 5 DRVAGISWETIEEVRRRLKERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAA-RGGE 63
Query: 93 ETKD-AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
D A +A +AF WS+ A ER + L + +L+ H +EL + L+ G+ L+
Sbjct: 64 REVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRA 123
Query: 152 EVDYGAKFIEFYAEEA-KRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210
+V A+ FYAE A + P D + ++ P G G ITPWN PL + T +
Sbjct: 124 QVARAAENFAFYAEYAEHAMEDRTFPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182
Query: 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQV 270
+ PALA G TVV+KP+E++P TA AE+ +A +PPGV N+V G + G AL+ P V
Sbjct: 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLV 242
Query: 271 RKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSG 330
+T TG T GK +M AA +K++S ELGG +P +VF DADL A++ + F +G
Sbjct: 243 PLLTLTGETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNG 302
Query: 331 QTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390
+ C ++R+LV+E I+E F + + ++VG GPLI+ L++V +VE
Sbjct: 303 ERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEA 362
Query: 391 AVSKGAKVLLGGRRHSLGMT--------FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 442
+GA++L+GG R + PTV ++ M +++EE+FGPV + FK
Sbjct: 363 GKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421
Query: 443 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQS 502
EEEA+ ANDT GLAAY+FT +L+R R++ LE G+V +N + PFGGVK S
Sbjct: 422 DEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGS 481
Query: 503 GLGREGSKYGMDEFLEIKYVCL 524
G REG Y +D + ++K + L
Sbjct: 482 GDRREGGTYALDFYTDLKTIAL 503
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 576 bits (1488), Expect = 0.0
Identities = 185/475 (38%), Positives = 270/475 (56%), Gaps = 6/475 (1%)
Query: 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNS---WSKL 111
Q I +W DA KT NP+TGEVI V+ ++ A+ +A AF W ++
Sbjct: 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRM 79
Query: 112 TAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRV 170
A+ R + L + DL+ + L L TL+ GKP + + ++D K + +YA A +
Sbjct: 80 DASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKY 139
Query: 171 YGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230
+G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV+K +E TP
Sbjct: 140 HGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 198
Query: 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290
LTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGST +G+ + A
Sbjct: 199 LTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAG 258
Query: 291 GT-VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
+ +K+V+LELGG +P I+ DAD++ AV A A F N GQ +R VQE IY++F
Sbjct: 259 SSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEF 318
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
+ K+ VG+ F QGP +++ +K+ ++ +GAK+L GG +
Sbjct: 319 VERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRG 378
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469
F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA +FT +L +
Sbjct: 379 YFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDK 438
Query: 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K V +
Sbjct: 439 ANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 574 bits (1482), Expect = 0.0
Identities = 180/512 (35%), Positives = 275/512 (53%), Gaps = 11/512 (2%)
Query: 24 SMQSYTPAFSRQMSVGMKSVTDRLRDSGLLR--TQGLIGGKWIDAYDGKTLEVHNPATGE 81
S + S + + ++ + L+ Q IGG+++DA KT NP G
Sbjct: 4 SHHHHHTTGEDDESECVINYVEKAVNKLTLQMPYQLFIGGEFVDAEGSKTYNTINPTDGS 63
Query: 82 VIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKEELGQLIT 139
VI VS + A+++A +AF W K+ A +R + L + D++ H+EEL +
Sbjct: 64 VICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEA 123
Query: 140 LEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL---FVLKQPVGVAG 195
L+ G A V + ++A ++ G IP K+PVGV G
Sbjct: 124 LDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCG 183
Query: 196 AITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMG 255
+ PWN+PL M++ K LA G TVV+KP++ TPLTAL AEL L+AGIP GVVN++ G
Sbjct: 184 IVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPG 243
Query: 256 NAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-GTVKKVSLELGGNAPCIVFDDADL 314
+ +G L P VRKI FTGST VGK +M A VKKVSLELGG +P I+F D DL
Sbjct: 244 SGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDL 303
Query: 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374
N AV +++ F N G+ C+ A R+ V+E I+ +F + V+ +K+G+ GP
Sbjct: 304 NKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGP 363
Query: 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGP 434
++A L K+ + + V +GA ++ GG + F++PTV ++V+ M +++EE FGP
Sbjct: 364 QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGP 423
Query: 435 VAPLLCFKTE--EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
+ + F + + AN T GLA+ +FT ++ + VS+ L+ G V +N +
Sbjct: 424 IMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDV 483
Query: 493 VAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
APFGG KQSG G++ + ++E+L IK V
Sbjct: 484 AAPFGGFKQSGFGKDLGEAALNEYLRIKTVTF 515
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 572 bits (1477), Expect = 0.0
Identities = 164/474 (34%), Positives = 259/474 (54%), Gaps = 9/474 (1%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNSWSKLT 112
+ + I G W D L V +P+T E A +S +G D AI++A AF +W +
Sbjct: 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVIS-LGSTRDADKAINAAKKAFQTWKTTS 83
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVY 171
ER + K ++ ++ + I++E G P+ A + G+ I + + K
Sbjct: 84 PHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFS 143
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
+ + + + +GV G ITPWN+P+ +T KV PAL GCT+V+KPSE PL
Sbjct: 144 FQEALIE-GNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPL 202
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
+A+ AE+ +A +P GV N++ G+ ++G L P + I+FTGST GK + A+
Sbjct: 203 SAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASN 262
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
T+K+V LELGG I+F DAD++ A+ + F NSGQ+C R+LV++ IY+K
Sbjct: 263 TLKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIK 321
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT- 410
+ +VG G G GP+++K +K++ ++ + +GA ++ GG +GM
Sbjct: 322 TAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMER 381
Query: 411 --FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468
+ PTV ++VK M + REE+FGPV LL F TE+EA+ +ANDT GL YI + +
Sbjct: 382 GYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRS 441
Query: 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
+ R++ + G+V VN + + FGGVK SG REG +G+ EFL+ K +
Sbjct: 442 KCRRIAAQVRSGMVEVNGHELPGG-SYFGGVKFSGRAREGGLWGIKEFLDTKAI 494
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 566 bits (1462), Expect = 0.0
Identities = 160/477 (33%), Positives = 254/477 (53%), Gaps = 10/477 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKD-AISSAFDAFNS--WSK 110
+ IGGKW +EV PATGE + V M D A+++A AF++ W
Sbjct: 8 YDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVP-MAAAADVDAAVAAARAAFDNGPWPS 66
Query: 111 LTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKR 169
ER+ + +L K+ +L+ E G+P + ++A A +
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 170 VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFT 229
V + + V ++PVGV GAI WN PL + K+ PAL GCT+V+KP+ T
Sbjct: 127 VTWTETRTGSYGQSI-VSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAET 185
Query: 230 PLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289
PLTA A AE+ + G+P GV++VV G + G AL ++P + TFTGS+AVG+++ A
Sbjct: 186 PLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRA 244
Query: 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
A +K +LELGG + I+ +D DL A+ + + N+GQ CV R+L Y++
Sbjct: 245 AEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
A + V L VG GPLI++ +VE ++ + +GA+++ GG R
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 410 T--FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467
F +PTV ++V ++M +++EE+FGPV ++ + TEE+AI +AND+ GLA ++T ++
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDV 424
Query: 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524
+ ++S+ + G G+N +PFGG K SG+GRE G++ F + K V L
Sbjct: 425 PKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 558 bits (1440), Expect = 0.0
Identities = 146/513 (28%), Positives = 240/513 (46%), Gaps = 17/513 (3%)
Query: 20 SHLPSMQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA- 78
H P +T +R+ + + +I G+ + ++ NPA
Sbjct: 7 KHEP-FTDFTVEANRK---AFEEALGLVEKELGKEYPLIINGERVTT--EDKIQSWNPAR 60
Query: 79 TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLI 138
+++ +VS + AI SA +AF +W + ER+ L K ++ K E +
Sbjct: 61 KDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSAWL 120
Query: 139 TLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAIT 198
E GKP KEA + F+E+YA + + + P + P+GV I+
Sbjct: 121 VHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTIS 180
Query: 199 PWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP 258
PWNF LA++ + G TVV+KP+ TP+ A E+ AG+P GV+N V G+
Sbjct: 181 PWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGA 240
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDA 312
++GD L+ P+ ITFTGS VG +L AA +K+V +E+GG +V DA
Sbjct: 241 EVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDA 300
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL++A L + F SGQ C +R ++ + +Y++ + KNL VGD
Sbjct: 301 DLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYM 360
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 432
GP+I++ A EK+ +++E +G +++ GG S F +PT+++++ E ++ +EE+F
Sbjct: 361 GPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIF 419
Query: 433 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
GPV + A+ +AN+T GL + T N + G + N
Sbjct: 420 GPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAI 479
Query: 493 VA--PFGGVKQSGLG-REGSKYGMDEFLEIKYV 522
V PFGG K SG + G + ++ K V
Sbjct: 480 VGYHPFGGFKMSGTDSKAGGPDYLALHMQAKTV 512
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 532 bits (1373), Expect = 0.0
Identities = 151/505 (29%), Positives = 237/505 (46%), Gaps = 19/505 (3%)
Query: 30 PAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSC 88
R M ++ V + L IGG+W+D + + NP+ EV+ +
Sbjct: 17 EEARRAMREALRRVREEFGRHYPL----YIGGEWVDT--KERMVSLNPSAPSEVVGTTAK 70
Query: 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148
G E + A+ +A+ AF +W +RS+ L K L+ K EL + E GK E
Sbjct: 71 AGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVE 130
Query: 149 AVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMI 207
A +V FIE+YA A R + P P+G I PWNFP+A+
Sbjct: 131 ASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIF 190
Query: 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTS 267
T + +A G TV+ KP+E + E+ +AG PPGVVN + G ++G L+
Sbjct: 191 TGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEH 250
Query: 268 PQVRKITFTGSTAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGA 321
P++R I FTGS VG K+ A K+ +E GG IV + AD ++A G
Sbjct: 251 PRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGV 310
Query: 322 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAAL 381
+ + + GQ C A+R+++ +G YE + K + L VG E GP+++
Sbjct: 311 VVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGP-AEENPDLGPVVSAEQE 369
Query: 382 EKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 441
KV +++E ++G +++LGG+R F PTV + V + +++EE+FGPV ++
Sbjct: 370 RKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRV 428
Query: 442 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGV 499
K EA+ +ANDT GL +++ + G + N + V PFGG
Sbjct: 429 KDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGF 488
Query: 500 KQSGLGRE-GSKYGMDEFLEIKYVC 523
K SG + G+ + FLE+K V
Sbjct: 489 KLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 528 bits (1363), Expect = 0.0
Identities = 104/514 (20%), Positives = 185/514 (35%), Gaps = 48/514 (9%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + G+WI G + + +P TG + VS G + + D + LT
Sbjct: 7 LLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTY 65
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
A+R+ L LL A + + + T G ++ ++D G + +YA+ +
Sbjct: 66 AQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEV 125
Query: 174 IIPATLPDRRL---------FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
L VL GVA I +NFP + K PAL G V+VK
Sbjct: 126 HALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVK 185
Query: 225 PSEFTPLTALAAAELALQAGI-PPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283
P+ T + AGI PPG ++++ G++ L ++FTGS
Sbjct: 186 PATATAWLTQRMVADVVDAGILPPGALSIICGSS---AGLLDQIRSFDVVSFTGSADTAA 242
Query: 284 KLMAGAAGTVK--KVSLELGGNAPCIVFDDAD-----LNVAVNGALAAKFRNSGQTCVCA 336
L A A + +++++ I+ DA ++ + + SGQ C
Sbjct: 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAI 302
Query: 337 NRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA 396
R V E E +A + + VG+ + V G L+++ E V + +
Sbjct: 303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAV 362
Query: 397 KVLLGGRRHSLGMT-----FYEPTVL--SNVKSEMLVSREEVFGPVAPLLCFKT------ 443
+ P + ++ + L+ EVFGPVA + ++
Sbjct: 363 LAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNA 422
Query: 444 --EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-----------EGLIS 490
E A+ +A L A I++N+ R++ L V+
Sbjct: 423 LPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNV 482
Query: 491 TEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 523
++ GG ++G G E G + + +
Sbjct: 483 MPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQ 516
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-165
Identities = 120/517 (23%), Positives = 191/517 (36%), Gaps = 45/517 (8%)
Query: 33 SRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYD-GKTLEVHNPATGEVIANVSCMGG 91
S + +G +++ + + + L+ G+W+D + H PA + V
Sbjct: 8 SSGVDLGTENLYFQSMMIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVGTVE---- 63
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
A +A +AF ++ + ER+ LR D + A E + ++ + E G P G
Sbjct: 64 -LVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG 122
Query: 152 EVDYGAKFIEFYAEEAK------RVYGEIIPATLPDRR--LFVLKQPVGVAGAITPWNFP 203
E + +A+ + R +P P R + ++++PVG NFP
Sbjct: 123 ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFP 182
Query: 204 LAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNA 257
LA T ALA GC VVVK P T AE A G+ PGV +++ G +
Sbjct: 183 LAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGS 242
Query: 258 PDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKV--SLELGGNAPCIVFDDADLN 315
D+G AL+ P ++ + FTGS A G+ L A + + ELG P + +A
Sbjct: 243 RDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKA 302
Query: 316 VA---VNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGDGFGEGVV 371
A G + +GQ C +V EG ++F A +A+ + +G+
Sbjct: 303 RAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIA 362
Query: 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEV 431
+ +A A K LL + EEV
Sbjct: 363 KAYRDGQARF---------ATRNAVKPLLATESSGRDASPNLFETTGAQFLADHALGEEV 413
Query: 432 FGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT--NNLQRTWRVSEALEY--GLVGVNEG 487
FGP+ ++ + E +A L A I +L+ R+ LE G V VN
Sbjct: 414 FGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGF 473
Query: 488 LISTEV----APFGGVKQSGLGREGS--KYGMDEFLE 518
EV G S S + FL
Sbjct: 474 PTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 455 bits (1172), Expect = e-150
Identities = 142/494 (28%), Positives = 214/494 (43%), Gaps = 13/494 (2%)
Query: 40 MKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAI 98
++R I GK + + NP EV+ + G E DAI
Sbjct: 517 FPKHIAQVRTQLGKTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAI 574
Query: 99 SSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAK 158
++A AF +W R++ L K EL LE GK +A +V
Sbjct: 575 AAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAID 634
Query: 159 FIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACG 218
F+E+YA E R+ P +P GVA I PWNFPLA+ A+ G
Sbjct: 635 FLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTG 694
Query: 219 CTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGS 278
VV KPS T + EL +AG+P GV N G +GD L+ P + I FTGS
Sbjct: 695 NCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGS 754
Query: 279 TAVGKKLMAGAA------GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQT 332
G +++ AA VKK+ E+GG I+ DDADL+ AV L + F GQ
Sbjct: 755 METGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQK 814
Query: 333 CVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAV 392
C +RV+V + +Y+KF + K KVG G + + A++ ++ + E
Sbjct: 815 CSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGK 874
Query: 393 SKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452
+G + G F T++ +K E +++EE+FGPV ++ K ++AI AN
Sbjct: 875 REGHVLYESPVPAGEG-YFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWAN 933
Query: 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLG-REGS 509
T L IF+ + + + G + +N V PFGG + SG+G + G
Sbjct: 934 STQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGG 993
Query: 510 KYGMDEFLEIKYVC 523
+ F++ + V
Sbjct: 994 PDYLLHFMDPRVVT 1007
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 418 bits (1076), Expect = e-142
Identities = 93/486 (19%), Positives = 159/486 (32%), Gaps = 38/486 (7%)
Query: 64 IDAYDGKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRK 122
++ N TGE + E A ++A + +L ++R+ LR
Sbjct: 1 MNPQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRT 60
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE--------I 174
L A +++ LE P GE+ A + +A+
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNP 120
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR--KVGPALACGCTVVVKPSEFTPLT 232
A LP + + +G NFPLA ALA GC V+VK P T
Sbjct: 121 TRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGT 180
Query: 233 ALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288
+ AE QA +P + ++ GN +G AL++ P+++ + FTGS G+ L
Sbjct: 181 SQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNL 240
Query: 289 AAGTVKKVS--LELGGNAPCIVFDDADLNVA--VNGALAAKFRNSGQTCVCANRVLVQEG 344
A + + ELG P +F A A + +A+ GQ C V
Sbjct: 241 AHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNT 300
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
AF + + + + P I + +V G V
Sbjct: 301 P---ETQAFIETAQ--SLIRQQSPSTLLTPGIRDSYQSQVV---SRGSDDGIDVTFSQAE 352
Query: 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFT 464
+ S + EE+FGP + ++ + + + ++ L A I
Sbjct: 353 SP-CVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHA 411
Query: 465 --NNLQRTWRVSEALEY--GLVGVNE---GLISTEVAPFGGVKQS---GLGREGSKYGMD 514
+ + ++ LE G + N G+ GG + +
Sbjct: 412 TEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEAIH 471
Query: 515 EFLEIK 520
+L
Sbjct: 472 RWLRPV 477
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 366 bits (943), Expect = e-122
Identities = 154/465 (33%), Positives = 252/465 (54%), Gaps = 8/465 (1%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
+ + I G+W+++ + +V NPAT EV+ V ++ A +A +AF +WSK+
Sbjct: 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAV 64
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R++ L + LL HKEEL LIT+E GK KEA+GEV G + +EF A + G+
Sbjct: 65 PRRARILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGD 124
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLT 232
+ + D + P+GV G I P+NFP M+ A+A G T ++KPSE TPL
Sbjct: 125 SLASIATDVEAANYRYPIGVVGGIAPFNFP-MMVPCWMFPMAIALGNTFILKPSERTPLL 183
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
EL +AG+P GV NVV G A D+ + +L P+++ I+F GS VG+ + +
Sbjct: 184 TEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSEN 242
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
+K+V G IV +DA+L V + A F ++G+ C+ V V+EGI ++F
Sbjct: 243 LKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAK 302
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412
+ V ++K+G+G +GV GP+I + ++ +++E + +GA+++ GR + ++
Sbjct: 303 LQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYF 362
Query: 413 E-PTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471
PT+ NV +EM + ++E+F PV ++ K +EAI +AN + A +FT+N
Sbjct: 363 VGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIR 422
Query: 472 RVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 514
E ++ G++G+N G + +A PF G K S G G D
Sbjct: 423 YFRENIDAGMLGINLG-VPAPMAFFPFSGWKSSFFG-TLHANGKD 465
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 361 bits (928), Expect = e-119
Identities = 137/470 (29%), Positives = 228/470 (48%), Gaps = 14/470 (2%)
Query: 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTA 113
I GK + G+ + NPATGEV V+ + A+ SA A W+
Sbjct: 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNP 85
Query: 114 AERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE 173
R++ K+ LL + EL ++++ E GK + +A G++ G + EF E
Sbjct: 86 QRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSE 145
Query: 174 IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR-KVGPALACGCTVVVKPSEFTPLT 232
P ++ ++QPVG+ ITP+NFP MI PA+ACG ++KPSE P
Sbjct: 146 FTEGAGPGIDMYSIRQPVGIGAGITPFNFP-GMIPMWMFAPAIACGNAFILKPSERDPSV 204
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
+ AEL ++AG+P G++NVV G DA+LT P + ++F GST + + + AA
Sbjct: 205 PIRLAELMIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMN 263
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCV-CANRVLVQEGIYEKFAD 351
K+ G I+ DADL+ A N + A + ++G+ C+ + V V E + D
Sbjct: 264 GKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLID 323
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL---- 407
V++L++G E GP++ K A +++ + ++ + +GAK+++ GR L
Sbjct: 324 KLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 408 -GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466
G F + +V +M + + E+FGPV ++ + EEA+ + G I+T +
Sbjct: 384 NG-HFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRD 442
Query: 467 LQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGLGREGSKYGMD 514
+ + G+VGVN I +A FGG K S G + +++G D
Sbjct: 443 GDAARDFASRINIGMVGVNVP-IPVPLAYHSFGGWKSSSFG-DLNQHGTD 490
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 346 bits (890), Expect = e-114
Identities = 72/424 (16%), Positives = 146/424 (34%), Gaps = 43/424 (10%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG 151
+E ++ I SA A + ++ + ++ D +E+L ++ E G + +
Sbjct: 12 QEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKV 71
Query: 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
+ A + K + + ++++ + P+GV + P P + + K
Sbjct: 72 IKNVFA--SKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKT 129
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTS 267
++ G ++V P L + A +AG P G ++ + D L+
Sbjct: 130 LISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKH 189
Query: 268 PQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFR 327
I TG +A+ K A + GN P + A++ AV L +K
Sbjct: 190 KDTAVILATGGSAMVKA----AYSSGTPAIGVGPGNGPAFIERSANIPRAVKHILDSKTF 245
Query: 328 NSGQTCVCANRVLVQEGIYEKFADAFSKAVKNL-------KVGDG-FGEGVVQGPLINKA 379
++G C V+V+ E F K + ++G P I
Sbjct: 246 DNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGK 305
Query: 380 ALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLL 439
+++ + V A+VL+ + V +++ SRE+ P+
Sbjct: 306 SVQHIANLAGLTVPADARVLIAE--------------ETKVGAKIPYSREK-LAPILAFY 350
Query: 440 CFKTEEEAIHMANDTNA----GLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAP 495
+T +EA ++ D G I + + + + + VN
Sbjct: 351 TAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTP------GA 404
Query: 496 FGGV 499
GG+
Sbjct: 405 LGGI 408
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 352 bits (905), Expect = e-111
Identities = 120/441 (27%), Positives = 199/441 (45%), Gaps = 15/441 (3%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
+ A+++A F WS+ A R+ L + LL + L+ E GK L +A+ E
Sbjct: 551 QAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSE 610
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKV 211
+ A F +YA + ++++G P L + GV AI+PWNFPLA+ +V
Sbjct: 611 LREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQV 670
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
AL G +VV KP+E TP A A L +AGIP + +V G+ IG AL P +
Sbjct: 671 TAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAALTAHPDIA 729
Query: 272 KITFTGSTAVGKKL---MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 328
+ FTGST V + + +A G + + E GG I A + + + FR+
Sbjct: 730 GVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRS 789
Query: 329 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388
+GQ C + VQE + ++ + + A + LK+GD GP+I+ A ++++ +
Sbjct: 790 AGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHI 849
Query: 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EE 446
++ G F P + ++ L EEVFGP+ ++ ++ E E
Sbjct: 850 ARMKTEARLHFAGPAPEG---CFVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLER 904
Query: 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVA--PFGGVKQSGL 504
+ T GL + + + + ++ G + VN +I V PFGG SG
Sbjct: 905 VLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGT 964
Query: 505 G-REGSKYGMDEFLEIKYVCL 524
G + G + + F + V +
Sbjct: 965 GPKAGGPHYLARFATEQTVTI 985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 320 bits (823), Expect = e-105
Identities = 74/418 (17%), Positives = 149/418 (35%), Gaps = 30/418 (7%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
E I+ A ++ + + K R + L Q E G + E
Sbjct: 8 ELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVI 67
Query: 153 VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212
++ A + + ++ G + + + +PVG+ I P P + K
Sbjct: 68 KNHFASEFIYNKYKDEQTCGIL--EEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSL 125
Query: 213 PALACGCTVVVKPSEFTPLTALAAAEL----ALQAGIPPGVVNVVMGNAPDIGDALLTSP 268
+L ++ P + AA+L A+ AG P ++ + + ++ +AL+
Sbjct: 126 ISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHD 185
Query: 269 QVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRN 328
+ I TG + K A + K GN P ++ + AD+ AV L +K +
Sbjct: 186 DIALILATGGPGMVKA----AYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFD 241
Query: 329 SGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFV 388
+G C V+V + +Y++ + F+ ++ + V + LI+ A K+
Sbjct: 242 NGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDA-DKVRKVLLIDGALNAKIVGQP 300
Query: 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448
A+++ A V + L V + + E+ P + E+A+
Sbjct: 301 ATAIAEMAGVKVPADTK-----VLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDAV 354
Query: 449 HMA----NDTNAGLAAYIFTN---NLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGV 499
A G + ++TN N R + ++ + +N GG+
Sbjct: 355 AQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIP------TTHGGI 406
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 283 bits (727), Expect = 3e-89
Identities = 110/467 (23%), Positives = 195/467 (41%), Gaps = 23/467 (4%)
Query: 58 LIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAER 116
++G + + + +P +A AI +A A W A+R
Sbjct: 67 VVGDEEV--WTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADR 124
Query: 117 SKGLRKWYDLLMA-HKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEI 174
++ K D+L + E+ + QGK + +A + F F A+ A + GE
Sbjct: 125 AQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQ 184
Query: 175 IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTAL 234
+ P V + G AI+P+NF A+ G G V+ KPS+ L +
Sbjct: 185 PISVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASY 243
Query: 235 AAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA---- 290
A + +AG+PP ++ V + P GD + +S + I FTGS K L A
Sbjct: 244 AVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLD 303
Query: 291 --GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEK 348
T +++ E GG V AD++ V+G L + F GQ C +R+ V + ++ +
Sbjct: 304 RFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQ 363
Query: 349 FADAFSKAVKNLKVGDGFGE-GVVQGPLINKAALEKVETFVEDAVSKG-AKVLLGGRRHS 406
+ +KVGD + G +I+ A +++ ++E A S +L GG+ +
Sbjct: 364 IKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNE 423
Query: 407 LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE--EEAIHMANDTNA-GLAAYIF 463
+ EP ++ + + + +EE+FGPV + + + E + + + T + GL +F
Sbjct: 424 SVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVF 483
Query: 464 TNNLQRTWRVSEALEYGLVG---VNEGLISTEVA--PFGGVKQSGLG 505
+ + L G +N+ + V PFGG + SG
Sbjct: 484 AQDKAIVQEATRMLRNA-AGNFYINDKSTGSVVGQQPFGGARASGTN 529
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 277 bits (711), Expect = 6e-88
Identities = 128/438 (29%), Positives = 201/438 (45%), Gaps = 32/438 (7%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VG 151
+ +A+ A AF+S R + L L+ ++EL + + K A
Sbjct: 19 KISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYE 78
Query: 152 EVDYGAKFIEFYAEE----AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMI 207
EV Y + IE+ ++ A E P T D L++ +P+GV I WN+P +
Sbjct: 79 EVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDE-LYIHSEPLGVVLVIGTWNYPFNLT 137
Query: 208 TRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL 264
+ P A+A G VV+KPSE + A A + + + + V+ G L
Sbjct: 138 ---IQPMVGAIAAGNAVVLKPSELSENMASLLATI-IPQYLDKDLYPVING-GVPETTEL 192
Query: 265 LTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324
L I +TGST VGK +M AA + V+LELGG +PC V + DL+VA
Sbjct: 193 LKERFD-HILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP----LINKAA 380
KF NSGQTCV + +L I + + K++K +GE + +I+
Sbjct: 252 KFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-----YGEDAKKSRDYGRIISARH 306
Query: 381 LEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 440
++V +E KV GG + + PT+L++V + V +EE+FGPV P++C
Sbjct: 307 FQRVMGLIEG-----QKVAYGGTGDAATR-YIAPTILTDVDPQSPVMQEEIFGPVLPIVC 360
Query: 441 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGG 498
++ EEAI N LA Y+F++N + ++ G V N+ ++ + PFGG
Sbjct: 361 VRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHSLPFGG 420
Query: 499 VKQSGLGREGSKYGMDEF 516
V SG+G K + F
Sbjct: 421 VGNSGMGSYHGKKSFETF 438
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 253 bits (649), Expect = 6e-79
Identities = 115/441 (26%), Positives = 191/441 (43%), Gaps = 37/441 (8%)
Query: 94 TKDAISSAFD----AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA 149
+ I S F F + + R + L + + ++ +KE L + + GKP
Sbjct: 26 SPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVV 85
Query: 150 --------VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWN 201
+ E+D+ ++ + V P +V+++P GV I P+N
Sbjct: 86 DLAEIGAVLHEIDFALAHLDEWVA-PVSVPSPD--IIAPSE-CYVVQEPYGVTYIIGPFN 141
Query: 202 FPLAMITRKVGP---ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP 258
+P+ + + P A+ G T ++KPSE TP T+ ++ + P V V+ G
Sbjct: 142 YPVNLT---LTPLIGAIIGGNTCIIKPSETTPETSAVIEKI-IAEAFAPEYVAVIQG-GR 196
Query: 259 DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAV 318
D LL+ P I FTGS VGK +M AA + V LELGG P IV DADL+ V
Sbjct: 197 DENSHLLSLP-FDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADLDQTV 255
Query: 319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 378
N + KF NSGQT + + + V + + + + VK E G L+ +
Sbjct: 256 NQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTE-----LPEINSTGKLVTE 310
Query: 379 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438
++++ + +E +VL+G + TV+ V+ + EE+FGP+ P+
Sbjct: 311 RQVQRLVSLLEAT---QGQVLVGSQADVSKR-ALSATVVDGVEWNDPLMSEELFGPILPV 366
Query: 439 LCFKTEEEAIHMANDTNAG-LAAYIFTNNLQRTWRVSEALEYGLVGVNEGL--ISTEVAP 495
L F + AI N + LA Y+F ++ + ++ G VN + + P
Sbjct: 367 LEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLP 426
Query: 496 FGGVKQSGLGREGSKYGMDEF 516
FGG+ SG+G + F
Sbjct: 427 FGGIGASGMGEYHGHFSYLTF 447
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 3e-05
Identities = 64/459 (13%), Positives = 118/459 (25%), Gaps = 159/459 (34%)
Query: 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSK------LTAAERSKGLRK 122
L V A + N C K+ +D S SK + + + G +
Sbjct: 19 KDILSVFEDA---FVDNFDC---KDVQDMPKSIL------SKEEIDHIIMSKDAVSGTLR 66
Query: 123 WYDLLMAHKEELGQLITLEQGKPLKEAVGEV---DYGAKFI---------------EFYA 164
+ L++ +EE+ +++ V EV +Y F+ Y
Sbjct: 67 LFWTLLSKQEEM-----------VQKFVEEVLRINYK--FLMSPIKTEQRQPSMMTRMYI 113
Query: 165 EEAKRVYGE---IIPATLPDRRLF-VLK------QP---VGVAGAITPWNFPLAMITRKV 211
E+ R+Y + + + + L+ +P V + G ++
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG----------VL---- 159
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDAL-----LT 266
G G T + +Q + + + + N L L
Sbjct: 160 G----SGKTW---------VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 267 SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC-IVFDDADLNVAV-NGALAA 324
T + KL + + L+ C +V + V N
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN------VQNAKAWN 260
Query: 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384
F S C ++L+ + +V D ++
Sbjct: 261 AFNLS---C----KILL--------------TTRFKQVTDFLSAATTTHISLD----HHS 295
Query: 385 ETFVEDAVSKG--AKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC-- 440
T D K K L + + + L EV P
Sbjct: 296 MTLTPDE-VKSLLLKYL-------------------DCRPQDL--PREVLT-TNPRRLSI 332
Query: 441 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS-EALE 478
E+I T ++ + L S LE
Sbjct: 333 IA---ESIRDGLATWDNW-KHVNCDKLTTIIESSLNVLE 367
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.58 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.29 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-113 Score=912.76 Aligned_cols=472 Identities=38% Similarity=0.630 Sum_probs=452.3
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
+.+.||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|++|+++
T Consensus 6 ~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~e 85 (490)
T 2wme_A 6 EQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDE 85 (490)
T ss_dssp CBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 35689999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||+.+++. |+..+++.++||++.++++.+...+.. ++...+++++|+|||++|+|||||+.+.+++++
T Consensus 86 la~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~a 164 (490)
T 2wme_A 86 LAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSA 164 (490)
T ss_dssp HHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEE-TTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccccc-CCcceeEEecceeEEEEeccccCcchhhhhhHH
Confidence 999999999999999986 699999999999999988877665543 466788999999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHH-HHhc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA-GAAG 291 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~-~~a~ 291 (530)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++ .+++
T Consensus 165 ~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a~~ 244 (490)
T 2wme_A 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSS 244 (490)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhhcc
Confidence 999999999999999999999999999999999999999999988899999999999999999999999998876 4566
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++++
T Consensus 245 ~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~ 324 (490)
T 2wme_A 245 SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTN 324 (490)
T ss_dssp HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred CCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
+||+++..+++++.++|++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (490)
T 2wme_A 325 FGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEA 404 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHHHH
Confidence 99999999999999999999999999999998753 24799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+||++|++||++||+.|+|+++.
T Consensus 405 i~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~~ 483 (490)
T 2wme_A 405 IRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVEL 483 (490)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEEC
Confidence 9999999999999999999999999999999999999998777788999999999999999999999999999999874
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-111 Score=896.07 Aligned_cols=474 Identities=57% Similarity=0.993 Sum_probs=456.7
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 10 LLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp GSCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567899999998778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
++|++++++|+|||..+++.|+..+++.++||+..+++..+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 169 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKV 169 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHH
Confidence 99999999999999999999999999999999999888777666554457788999999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|++||+|++|+||||+.+|+.|++.+++
T Consensus 170 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa~ 249 (484)
T 3ifg_A 170 GPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249 (484)
T ss_dssp HHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTGG
T ss_pred HHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++++
T Consensus 250 ~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 329 (484)
T 3ifg_A 250 TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGAT 329 (484)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCC
T ss_pred cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+||+++..+++++.+++++++.+|+++++||.....+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 330 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 409 (484)
T 3ifg_A 330 LGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLA 409 (484)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999998754457999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 410 N~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 410 NDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999877788999999999999999999999999999999875
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-109 Score=889.12 Aligned_cols=471 Identities=59% Similarity=0.992 Sum_probs=455.2
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 110 (504)
T 3ek1_A 31 LKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANAD 110 (504)
T ss_dssp CCSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 44578999999998788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
+|++++++|+|||..+++.|+..+++.++||+.++.+..+...+...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 111 ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 190 (504)
T 3ek1_A 111 DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAA 190 (504)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999999887776655555577889999999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 191 ~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~ 270 (504)
T 3ek1_A 191 PALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPT 270 (504)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 271 lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 350 (504)
T 3ek1_A 271 IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVI 350 (504)
T ss_dssp TCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCB
T ss_pred cCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||+++..+++++.+++++++.+|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 351 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN 428 (504)
T 3ek1_A 351 GPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL--GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQAN 428 (504)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE--ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999763 479999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 429 ~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~ 501 (504)
T 3ek1_A 429 DTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501 (504)
T ss_dssp CSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEE
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999887788999999999999999999999999999999876
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-108 Score=884.67 Aligned_cols=473 Identities=39% Similarity=0.669 Sum_probs=455.4
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhc--HhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| +.|+.++..+|.++|++++++|+++
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 110 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIKEH 110 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHh
Confidence 34678999999998788999999999999999999999999999999999999 8899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
+++|++++++|+|||+.+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.+++
T Consensus 111 ~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 190 (520)
T 3ed6_A 111 REALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWK 190 (520)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999999999998877765554435677899999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|++++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 191 ~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~aa 270 (520)
T 3ed6_A 191 IAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNAA 270 (520)
T ss_dssp HHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++
T Consensus 271 ~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~ 350 (520)
T 3ed6_A 271 NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADT 350 (520)
T ss_dssp TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTC
T ss_pred hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 446 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e 446 (530)
++||++++.+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 351 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 430 (520)
T 3ed6_A 351 EMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQE 430 (520)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred cccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCCHHH
Confidence 999999999999999999999999999999998642 3579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 431 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~~ 509 (520)
T 3ed6_A 431 AIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHILTN 509 (520)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999999999887788999999999999999999999999999999886
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-108 Score=881.44 Aligned_cols=472 Identities=44% Similarity=0.749 Sum_probs=454.9
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 90 (506)
T 3rh9_A 11 NLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENREE 90 (506)
T ss_dssp CCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45789999999987889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEE-eeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLK-QPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~-~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||..+++.|+..+++.++||++.++++.+...+.. .+...++.+ +|+|||++|+|||||+.+.+++++
T Consensus 91 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a 169 (506)
T 3rh9_A 91 IGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLS 169 (506)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999988877665543 466788889 999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|++||+|++|+||||+.+|+.|++.++++
T Consensus 170 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~ 249 (506)
T 3rh9_A 170 AALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQ 249 (506)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTTTT
T ss_pred HHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|+++++
T Consensus 250 l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 329 (506)
T 3rh9_A 250 VKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDI 329 (506)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
||+++..+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 330 Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 409 (506)
T 3rh9_A 330 GPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAG 409 (506)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999986433 57999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 410 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 410 NDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp TCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred hCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 999999999999999999999999999999999998888889999999999999999999999999999998763
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-107 Score=873.19 Aligned_cols=473 Identities=57% Similarity=1.023 Sum_probs=456.0
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 88 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDD 88 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||..+++.|+..+++.++||+..+.+..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 89 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 168 (481)
T 3jz4_A 89 LARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 168 (481)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988777666555455778899999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 169 ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa~~~ 248 (481)
T 3jz4_A 169 ALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI 248 (481)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++|
T Consensus 249 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 328 (481)
T 3jz4_A 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIG 328 (481)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND 453 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~ 453 (530)
|++++.+++++.+++++++.+|+++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+
T Consensus 329 pli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 408 (481)
T 3jz4_A 329 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQAND 408 (481)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHC
T ss_pred cccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHHHHhc
Confidence 99999999999999999999999999999874345799999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 454 TNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 454 ~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|++++
T Consensus 409 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 409 TEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp SSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 9999999999999999999999999999999998887889999999999999999999999999999998863
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-108 Score=879.52 Aligned_cols=472 Identities=35% Similarity=0.605 Sum_probs=453.4
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
+...++||||+|+.+.++ +++++||+||+++++++.++.+|++.|+++|++||+.|+.++..+|.++|++++++|++++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEA 101 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 344678999999987666 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||..++ +.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.+++
T Consensus 102 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (498)
T 4f3x_A 102 DEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWK 181 (498)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999 8999999999999999998876665543345677899999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.++
T Consensus 182 ~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 260 (498)
T 4f3x_A 182 LAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260 (498)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999988889999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++
T Consensus 261 ~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~ 340 (498)
T 4f3x_A 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTEN 340 (498)
T ss_dssp TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGC
T ss_pred hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCC-eEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga-~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
++||++++.+++++.+++++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 341 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 420 (498)
T 4f3x_A 341 EIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVA 420 (498)
T ss_dssp SSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSCHHH
T ss_pred ccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999 99999986444679999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 421 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~ 496 (498)
T 4f3x_A 421 WANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMIN 496 (498)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999888778999999999999999999999999999999875
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-107 Score=877.58 Aligned_cols=471 Identities=38% Similarity=0.635 Sum_probs=450.0
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCC---CCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPAT---LPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~---~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
+|++++++|+|||+.+++ .|+..+++.++||+++++++.+...+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999999988777654432 223367899999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hh-cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 289 AA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 289 ~a-~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
++ +++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCC--HH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EE 445 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~--~~ 445 (530)
+++++||+++..+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 9999999999999999999999999999999999976433479999999999999999999999999999999999 99
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 437 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999999999999999877778999999999999999999999999999999874
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-107 Score=875.97 Aligned_cols=473 Identities=37% Similarity=0.645 Sum_probs=453.2
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 91 (497)
T 3k2w_A 12 NKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENKHI 91 (497)
T ss_dssp TTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||..+++.|+..+++.++||+..++++.+...+....+...++.++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 171 (497)
T 3k2w_A 92 LAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGP 171 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999988877765554445678899999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~aa~~l 251 (497)
T 3k2w_A 172 ALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYM 251 (497)
T ss_dssp HHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHHHHHTTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++|
T Consensus 252 ~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~g 331 (497)
T 3k2w_A 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMG 331 (497)
T ss_dssp CCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBC
T ss_pred CCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc--cCC--CCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRR--HSL--GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~--~~~--~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
|+++..+++++.+++++++.+|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 332 pli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 411 (497)
T 3k2w_A 332 PKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIE 411 (497)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999973 222 579999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 412 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~~~~ 488 (497)
T 3k2w_A 412 FCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYINE 488 (497)
T ss_dssp HHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEEEEEc
Confidence 99999999999999999999999999999999999998887889999999999999999999999999999998863
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-107 Score=876.17 Aligned_cols=471 Identities=41% Similarity=0.663 Sum_probs=454.5
Q ss_pred ccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhc--HhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAF--NSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~--~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
.++||||+|+.+.++++++++||+| |+++++++.++.+|+++++++|++|| +.|+.++..+|.++|++++++|++++
T Consensus 23 ~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 102 (528)
T 3u4j_A 23 YQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILARQ 102 (528)
T ss_dssp CCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999987789999999999 99999999999999999999999999 78999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
++|++++++|+|||..+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 103 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 182 (528)
T 3u4j_A 103 EELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERV 182 (528)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988776655544346778999999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+.+|+.|++.+++
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 262 (528)
T 3u4j_A 183 PWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIAAR 262 (528)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|++++++
T Consensus 263 ~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 342 (528)
T 3u4j_A 263 TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTK 342 (528)
T ss_dssp TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCS
T ss_pred cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCC-CCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSL-GMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
+||+++..+++++.+++++++.+|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 343 ~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 422 (528)
T 3u4j_A 343 IGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVAL 422 (528)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred cCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHHHHH
Confidence 999999999999999999999999999999987532 5799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 423 aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 497 (528)
T 3u4j_A 423 ANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVT 497 (528)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEE
T ss_pred HhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999887888999999999999999999999999999999876
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-107 Score=870.69 Aligned_cols=472 Identities=40% Similarity=0.668 Sum_probs=452.7
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH-----hhhcCCHHHHHHHHHHHHHHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-----SWSKLTAAERSKGLRKWYDLLM 128 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~-----~w~~~~~~~R~~iL~~~a~~l~ 128 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|++++++|+
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l~ 86 (503)
T 3iwj_A 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKVT 86 (503)
T ss_dssp CCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHHH
T ss_pred CCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35689999999987889999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-C--CCCCCceeEEEEeeceEEEEECCCCcchH
Q 009618 129 AHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII-P--ATLPDRRLFVLKQPVGVAGAITPWNFPLA 205 (530)
Q Consensus 129 ~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~-~--~~~~g~~~~~~~~P~GVv~~i~p~n~P~~ 205 (530)
+++++|++++++|+|||+.+++.|+..+++.++||+..++++.+... + ....+...++.++|+|||++|+|||||+.
T Consensus 87 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 166 (503)
T 3iwj_A 87 EKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPML 166 (503)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchHHH
Confidence 99999999999999999999999999999999999999988766541 1 12235678999999999999999999999
Q ss_pred HHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHH
Q 009618 206 MITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKL 285 (530)
Q Consensus 206 ~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 285 (530)
+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+.+|+.|
T Consensus 167 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i 246 (503)
T 3iwj_A 167 MATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKI 246 (503)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 286 MAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 286 ~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 247 ~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 326 (503)
T 3iwj_A 247 MTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDP 326 (503)
T ss_dssp HHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCC
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT 443 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~ 443 (530)
+++++++||++++.+++++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 327 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 406 (503)
T 3iwj_A 327 LEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFST 406 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEEeCC
Confidence 99999999999999999999999999999999999998653 3589999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEE
Q 009618 444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 523 (530)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 407 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~ 486 (503)
T 3iwj_A 407 EEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVT 486 (503)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999998777789999999999999999999999999999998
Q ss_pred Ee
Q 009618 524 LG 525 (530)
Q Consensus 524 ~~ 525 (530)
++
T Consensus 487 ~~ 488 (503)
T 3iwj_A 487 QY 488 (503)
T ss_dssp EE
T ss_pred Ee
Confidence 86
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-106 Score=867.68 Aligned_cols=467 Identities=35% Similarity=0.585 Sum_probs=447.3
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
+..++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999998778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC-C----CceeEEEEeeceEEEEECCCCcchHHH
Q 009618 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATL-P----DRRLFVLKQPVGVAGAITPWNFPLAMI 207 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~-~----g~~~~~~~~P~GVv~~i~p~n~P~~~~ 207 (530)
+|++++++|+|||..+++.|+..+++.++||++.+.++.+...+... + +...++.++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999999887765544321 2 456788999999999999999999999
Q ss_pred HHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHH
Q 009618 208 TRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMA 287 (530)
Q Consensus 208 ~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 287 (530)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~ 249 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC
Q 009618 288 GAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG 367 (530)
Q Consensus 288 ~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~ 367 (530)
.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+
T Consensus 250 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~- 326 (505)
T 3prl_A 250 KAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPE- 326 (505)
T ss_dssp HCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT-
T ss_pred Hcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCCCC-
Confidence 887 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 368 EGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 368 ~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
+++++||+++..+++++.+++++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 327 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~---g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deA 403 (505)
T 3prl_A 327 DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQ---GNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEA 403 (505)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHH
T ss_pred CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|+++|||++||||+|.++++++++++++|+||||++.. ..+.+||||+|+||+|+++|.+|+++|++.|+|+++
T Consensus 404 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~~~ 482 (505)
T 3prl_A 404 ISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTVLN 482 (505)
T ss_dssp HHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999876 457899999999999999999999999999999875
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-106 Score=865.82 Aligned_cols=466 Identities=35% Similarity=0.579 Sum_probs=442.1
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|+++.++|
T Consensus 26 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 105 (497)
T 3i44_A 26 RKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSDM 105 (497)
T ss_dssp CCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999877889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEE-EeeceEEEEECCCCcchHHHHHHHh
Q 009618 135 GQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL-KQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~-~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
++++++|+|||+.+++ .|+..+++.++|+++..........+. .+...++. ++|+|||++|+|||||+.+.+++++
T Consensus 106 a~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 183 (497)
T 3i44_A 106 AKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI--EGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVI 183 (497)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS--TTCSSCEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc--CCceeEEEeecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 899999999999998876543322111 24446777 9999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++++
T Consensus 184 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~aa~~ 263 (497)
T 3i44_A 184 PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT 263 (497)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 264 ~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~ 342 (497)
T 3i44_A 264 LKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHI 342 (497)
T ss_dssp TCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCB
T ss_pred CCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCc-ccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGR-RHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~-~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
||++++.+++++++++++++.+|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 343 Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 422 (497)
T 3i44_A 343 GPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVT 422 (497)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHHHHHH
Confidence 9999999999999999999999999999994 322 2589999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
++|+++|||++||||+|.++++++++++++|+||||. ....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus 423 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 496 (497)
T 3i44_A 423 LANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAISY 496 (497)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEESC
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEEe
Confidence 9999999999999999999999999999999999994 5556789999999999999999999999999999864
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-106 Score=864.17 Aligned_cols=470 Identities=40% Similarity=0.647 Sum_probs=449.9
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|++++++|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 4579999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||+.++. .|+..+++.++||++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 699999999999999998877765443 23566789999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 259 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAG 259 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred -cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 291 -GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 291 -~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++
T Consensus 260 ~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (501)
T 1bxs_A 260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPG 339 (501)
T ss_dssp HTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTT
T ss_pred hccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++.+++++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (501)
T 1bxs_A 340 VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIK 419 (501)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999976423479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~ 495 (501)
T 1bxs_A 420 RANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIK 495 (501)
T ss_dssp HHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEc
Confidence 9999999999999999999999999999999999999877778899999999999999999999999999999886
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-106 Score=868.60 Aligned_cols=470 Identities=39% Similarity=0.620 Sum_probs=449.9
Q ss_pred ccceecCEeeeCCCCCe-EEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKT-LEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~-~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+.++++ ++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 20 ~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 99 (503)
T 1a4s_A 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998766788 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||+.+++.|+..+++.++||++.++++.+...+.. ++...++.++|+|||++|+|||||+.+.++++++
T Consensus 100 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 178 (503)
T 1a4s_A 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999999988766544433 3456789999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 179 ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa~~~ 257 (503)
T 1a4s_A 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999977 89999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++|
T Consensus 258 ~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~g 337 (503)
T 1a4s_A 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG 337 (503)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc--C----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRH--S----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
|+++..+++++.+++++++.+|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 pli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 417 (503)
T 1a4s_A 338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417 (503)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCCHHHH
Confidence 99999999999999999999999999999764 1 24799999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 418 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~~~ 496 (503)
T 1a4s_A 418 LQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEEEcc
Confidence 9999999999999999999999999999999999999998777788999999999999999999999999999998863
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-106 Score=862.52 Aligned_cols=472 Identities=39% Similarity=0.641 Sum_probs=451.2
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASE 85 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||+.+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 165 (479)
T 2imp_A 86 ISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAP 165 (479)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999887776665444334567889999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++.+++++
T Consensus 166 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~ 245 (479)
T 2imp_A 166 ALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNI 245 (479)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999977788999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCC-CCccc
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFG-EGVVQ 372 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~~ 372 (530)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+| +++++
T Consensus 246 ~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~ 325 (479)
T 2imp_A 246 TKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAM 325 (479)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSB
T ss_pred CcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 326 gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN 405 (479)
T 2imp_A 326 GPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMAN 405 (479)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHh
Confidence 99999999999999999999999999999976323479999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|||+++|||+|.++++++++++++|+|+||++...++.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 406 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 406 DSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp CSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred cCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 9999999999999999999999999999999999877778999999999999999999999999999999874
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-106 Score=867.05 Aligned_cols=471 Identities=37% Similarity=0.616 Sum_probs=450.8
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|
T Consensus 27 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 106 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADEL 106 (515)
T ss_dssp BCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
++++++|+|||..+++.|+..+++.++||++++++..+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 107 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 186 (515)
T 2d4e_A 107 AVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPA 186 (515)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhHH
Confidence 99999999999999999999999999999999888777655442345677899999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 187 LaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~~l~ 266 (515)
T 2d4e_A 187 LAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAADHLK 266 (515)
T ss_dssp HHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGGGTC
T ss_pred HHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999777899999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCc
Q 009618 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGP 374 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gp 374 (530)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|+++++||
T Consensus 267 ~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gp 346 (515)
T 2d4e_A 267 RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346 (515)
T ss_dssp EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCC
T ss_pred ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--------CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618 375 LINKAALEKVETFVEDAVSKGAKVLLGGRRHS--------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 446 (530)
Q Consensus 375 li~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e 446 (530)
+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|+||
T Consensus 347 li~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~~de 425 (515)
T 2d4e_A 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEE 425 (515)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCCHHH
Confidence 99999999999999999999999999997642 1479999999999 99999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 426 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~~~~ 505 (515)
T 2d4e_A 426 ALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIALPL 505 (515)
T ss_dssp HHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEEEES
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEEEcC
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998863
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-106 Score=862.33 Aligned_cols=470 Identities=36% Similarity=0.614 Sum_probs=448.5
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++++
T Consensus 22 ~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 22 MQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999998655 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..+++. |+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999999887766654433235567899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.+++++|++||+|++|+||||+.+|+.|++.+++
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa~ 259 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 259 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGG
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 99999999999778899999999999999999999999999999999
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|+|++++
T Consensus 260 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 339 (495)
T 1wnd_A 260 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 339 (495)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCC
T ss_pred cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCC-CeEeeCCc-ccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKG-AKVLLGGR-RHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~G-a~vl~gg~-~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+||++++.+++++.+++++++++| +++++||. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 418 (495)
T 1wnd_A 340 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVN 418 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999 99999997 43 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++|++.|+|+++
T Consensus 419 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 419 WANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 9999999999999999999999999999999999999776778999999999999999999999999999999874
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-106 Score=864.87 Aligned_cols=470 Identities=39% Similarity=0.616 Sum_probs=449.5
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
++||||+|+.+.++++++++||.||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999876788999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||+.++. .|+..+++.++||++.++++.+...+. .++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 699999999999999988877765443 235567899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a- 290 (530)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999977889999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 419 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGR 419 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999764234799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++|++.|+|+++.
T Consensus 420 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~ 495 (500)
T 1o04_A 420 ANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKV 495 (500)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEEC
T ss_pred HhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEec
Confidence 9999999999999999999999999999999999998777788999999999999999999999999999998863
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-106 Score=867.45 Aligned_cols=473 Identities=27% Similarity=0.461 Sum_probs=449.5
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 26 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (521)
T 4e4g_A 26 ELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMKFVQLLNDNMNE 105 (521)
T ss_dssp EECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999987789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||..+++.|+..+++.++||++....+.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 185 (521)
T 4e4g_A 106 LAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPMWMFAP 185 (521)
T ss_dssp HHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999887776654433334667889999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ .+.++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 186 ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~aa~~l 264 (521)
T 4e4g_A 186 AIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264 (521)
T ss_dssp HHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999994 566799999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++ +||+|+++|+++++++++|+|+++++++
T Consensus 265 kpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~ 344 (521)
T 4e4g_A 265 KRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADM 344 (521)
T ss_dssp CEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSB
T ss_pred CCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCcc
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC----CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS----LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~----~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai 448 (530)
||+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 345 gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi 424 (521)
T 4e4g_A 345 GPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEAL 424 (521)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeCCHHHHH
Confidence 9999999999999999999999999999997531 357999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEe
Q 009618 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|+++|||++||||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++|++.|+|+++
T Consensus 425 ~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~K~v~~~ 504 (521)
T 4e4g_A 425 SLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRTKTITSR 504 (521)
T ss_dssp HHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEEEEEEEC
T ss_pred HHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheEEEEEEe
Confidence 999999999999999999999999999999999999998654 468999999999999 78999999999999999886
Q ss_pred cC
Q 009618 526 DM 527 (530)
Q Consensus 526 ~~ 527 (530)
..
T Consensus 505 ~~ 506 (521)
T 4e4g_A 505 WP 506 (521)
T ss_dssp CC
T ss_pred cC
Confidence 43
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-106 Score=868.48 Aligned_cols=468 Identities=36% Similarity=0.600 Sum_probs=448.3
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 14 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 93 (517)
T 3r31_A 14 KASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERNDA 93 (517)
T ss_dssp SSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999887889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH----HhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKR----VYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~----~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
|++++++|+|||..++ |+..+++.++||++.+.+ +.+...+. .++. .++.++|+|||++|+|||||+.+.++
T Consensus 94 la~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~~ 169 (517)
T 3r31_A 94 LSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIACW 169 (517)
T ss_dssp HHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHHH
Confidence 9999999999999999 999999999999999887 66665543 2355 89999999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 170 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 248 (517)
T 3r31_A 170 KAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA 248 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 789999999999999999999999999999999
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 249 a~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 328 (517)
T 3r31_A 249 AGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYA 328 (517)
T ss_dssp HHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred hcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC---CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS---LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 446 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~---~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e 446 (530)
+++||++++.+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 329 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 408 (517)
T 3r31_A 329 THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDE 408 (517)
T ss_dssp CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEEECCHHH
T ss_pred CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEEeCCHHH
Confidence 9999999999999999999999999999999993121 2579999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++.
T Consensus 409 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 488 (517)
T 3r31_A 409 VLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELKTVYVST 488 (517)
T ss_dssp HHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEEEEEECC
T ss_pred HHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999999998877889999999999999999999999999999998763
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-106 Score=864.38 Aligned_cols=469 Identities=34% Similarity=0.564 Sum_probs=448.6
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH--hhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN--SWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~--~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999876678999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||..+++ .|+..+++.++||++.++++.+...+.. .+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTG-SYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEE-TTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 8999999999999999888777654422 24467899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+++|++||+|++|+||||+.+|+.|++.+++
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 246 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAAE 246 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999 88899999999999999999999999999999999
Q ss_pred ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcc
Q 009618 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVV 371 (530)
Q Consensus 292 ~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 371 (530)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++++
T Consensus 247 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 326 (495)
T 3b4w_A 247 MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQ 326 (495)
T ss_dssp TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCC
T ss_pred cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHS--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+||+++..+++++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 327 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 406 (495)
T 3b4w_A 327 IGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIA 406 (495)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHHHH
Confidence 99999999999999999999999999999997643 2479999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|+++|||+++|||+|.++++++++++++|+||||++. ..+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 407 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 407 IANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 999999999999999999999999999999999999987 7789999999999999999999999999999998763
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-105 Score=864.25 Aligned_cols=470 Identities=30% Similarity=0.497 Sum_probs=449.0
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
...++||||+|+. ++++++++||+| |+++++++.++.+|++.|+++|++||+.|+.++..+|.++|++++++|++++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRK 113 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3567899999998 688999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH-HHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEE-AKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~-~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
++|++++++|+|||..+++.|+..+++.++||++. ...+.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 192 (538)
T 3qan_A 114 HEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILSR-PGEQNRYFYTPMGVTVTISPWNFALAIMVGT 192 (538)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-TTEEEEEEEEECCEEEEECCSTTTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccc-CCcceeeecCCCcEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999998 566666655432 3677899999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 193 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa 272 (538)
T 3qan_A 193 AVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAA 272 (538)
T ss_dssp HHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred cc------cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCC
Q 009618 291 GT------VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGD 364 (530)
Q Consensus 291 ~~------~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~ 364 (530)
++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 273 ~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~ 352 (538)
T 3qan_A 273 VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGD 352 (538)
T ss_dssp SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCBSC
T ss_pred hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccCCC
Confidence 88 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCH
Q 009618 365 GFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTE 444 (530)
Q Consensus 365 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~ 444 (530)
|+|+++++||+++..+++++.+++++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 353 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 431 (538)
T 3qan_A 353 PTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDF 431 (538)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeCCH
Confidence 9999999999999999999999999999999 999999875335799999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEEC-CCCCC-CCCCcccCCCCCCCC-CCChHHHHHhhheeeE
Q 009618 445 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVN-EGLIS-TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKY 521 (530)
Q Consensus 445 ~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN-~~~~~-~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~ 521 (530)
||||+++|+++|||+++|||+|.++++++++++++|+|||| +.... .+.+||||+|+||+| +++|++||++|++.|+
T Consensus 432 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~ 511 (538)
T 3qan_A 432 DHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQAKT 511 (538)
T ss_dssp HHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999999 55554 789999999999999 9999999999999999
Q ss_pred EEEec
Q 009618 522 VCLGD 526 (530)
Q Consensus 522 v~~~~ 526 (530)
|+++.
T Consensus 512 v~~~~ 516 (538)
T 3qan_A 512 VSEMY 516 (538)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98763
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-105 Score=856.97 Aligned_cols=470 Identities=59% Similarity=0.987 Sum_probs=449.7
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+. ++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 12 ~~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 89 (487)
T 2w8n_A 12 RTDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDD 89 (487)
T ss_dssp CCSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999853 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||..+++.|+..+++.++||++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 90 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 169 (487)
T 2w8n_A 90 LARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGA 169 (487)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988877665444334667889999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeec---CCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVM---GNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.++++.|++||+|++|+||||+.+|+.|++.++
T Consensus 170 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 249 (487)
T 2w8n_A 170 ALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAA 249 (487)
T ss_dssp HHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999 767788999999999999999999999999999999
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhc-cccCCCCCCC
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKN-LKVGDGFGEG 369 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 369 (530)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 250 ~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~ 329 (487)
T 2w8n_A 250 NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEG 329 (487)
T ss_dssp TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTT
T ss_pred ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCc-eEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMT-FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~-~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai 448 (530)
+++||++++.+++++.+++++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 330 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi 408 (487)
T 2w8n_A 330 TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAI 408 (487)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHHHHH
Confidence 999999999999999999999999999999999764 2468 99999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 409 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~~ 486 (487)
T 2w8n_A 409 AIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGG 486 (487)
T ss_dssp HHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEECC
T ss_pred HHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEec
Confidence 999999999999999999999999999999999999998877778999999999999999999999999999998764
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-105 Score=849.94 Aligned_cols=457 Identities=38% Similarity=0.647 Sum_probs=433.2
Q ss_pred ceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 009618 57 GLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ 136 (530)
Q Consensus 57 ~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~ 136 (530)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 78 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAK 78 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999985 56 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhh
Q 009618 137 LITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALA 216 (530)
Q Consensus 137 ~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 216 (530)
++++|+|||..+++.|+..+++.++||++.++++.+...+.. +...++.++|+|||++|+|||||+.+.++++++||+
T Consensus 79 ~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 156 (486)
T 3pqa_A 79 ILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD--DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIA 156 (486)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCT--TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC--CceeEEEEccccEEEEECCCchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988776655432 667899999999999999999999999999999999
Q ss_pred cCCEEEeecCCCcHHHHHHHHHHHHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 217 CGCTVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 217 aGN~VVlKps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||+||+|||+.+|+++..+++++.++ |+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 157 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa-- 234 (486)
T 3pqa_A 157 TGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG-- 234 (486)
T ss_dssp TTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC--
T ss_pred cCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC--
Confidence 999999999999999999999999999 99999999999988888999999999999999999999999999887
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++
T Consensus 235 ~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~ 314 (486)
T 3pqa_A 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDV 314 (486)
T ss_dssp SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSB
T ss_pred CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||+++..+++++.+++++++.+|+++++||... |+|++|||+ +++++|++++||+||||++|++|+| ||||+++|
T Consensus 315 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN 389 (486)
T 3pqa_A 315 GPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRD---KALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIAN 389 (486)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCC---CcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHHHHh
Confidence 999999999999999999999999999999763 699999999 9999999999999999999999999 99999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 390 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 390 STEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp CSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 9999999999999999999999999999999999865 335899999999999999999999999999999875
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-104 Score=850.53 Aligned_cols=469 Identities=32% Similarity=0.554 Sum_probs=428.2
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (485)
T 4dng_A 7 NKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRDDI 86 (485)
T ss_dssp CSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999998877899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
++++++|+|||+.+++.|+..+++.++|+++...++.+...+.. .++...+++++|+|||++|+|||||+...++++++
T Consensus 87 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 166 (485)
T 4dng_A 87 IMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAP 166 (485)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999887766655433 34677899999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHH-HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 214 ALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
||++||+||+|||+.+|+++ ..|.+++.++|+|+|++|+|++++.+.++.|++||+|++|+||||+.+|+.|++.++++
T Consensus 167 ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~aa~~ 246 (485)
T 4dng_A 167 AIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA 246 (485)
T ss_dssp HHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHHHhhh
Confidence 99999999999999999999 99999999999999999999998778999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|+++++
T Consensus 247 ~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~ 326 (485)
T 4dng_A 247 FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVV 326 (485)
T ss_dssp TCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSB
T ss_pred ccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
||+++..+++++.+++++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 327 gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~---g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an 403 (485)
T 4dng_A 327 GPLINERQIEKALEIIEQAKTDGIELAVEGKRV---GNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMAN 403 (485)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE---TTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCC---CcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999763 79999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 404 DTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp CSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999998754 678999999999999999999999999999998763
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-104 Score=853.59 Aligned_cols=469 Identities=34% Similarity=0.565 Sum_probs=433.4
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (508)
T 3r64_A 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHREE 91 (508)
T ss_dssp TTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45689999999887889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCC-CCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT-LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||..+++.|+..+++.++|+++.+.+..+ ..+.. .++...++.++|+|||++|+|||||+.+.+++++
T Consensus 92 la~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 170 (508)
T 3r64_A 92 IVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVA 170 (508)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHH
Confidence 999999999999999999999999999999988877666 44432 3467889999999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHH-HHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 213 PALACGCTVVVKPSEFTPLTA-LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
+||++||+||+|||+.+|+++ ..+++++.++|+|+|++|+|+|++.+.+++|++||+|++|+||||+.+|+.|++.+++
T Consensus 171 ~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~aa~ 250 (508)
T 3r64_A 171 PALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAIN 250 (508)
T ss_dssp HHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHHHHHHS
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHHHHhhc
Confidence 999999999999999999999 9999999999999999999999778999999999999999999999999999999998
Q ss_pred --ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 292 --TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 292 --~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 251 ~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 330 (508)
T 3r64_A 251 GGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEG 330 (508)
T ss_dssp SSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSS
T ss_pred ccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++++++++++.+|+++++||... |+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 331 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (508)
T 3r64_A 331 TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIE---GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAE 407 (508)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEE---TTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESSHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCC---CcEEecEEEecCCCCChhhcccccCceEEEEEeCCHHHHHH
Confidence 999999999999999999999999999999999763 79999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++|++.|+|+++.
T Consensus 408 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~v~~~~ 485 (508)
T 3r64_A 408 LANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIGIKR 485 (508)
T ss_dssp HHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEEEEEEC
T ss_pred HHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999999998754 678999999999999999999999999999998863
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-104 Score=848.46 Aligned_cols=453 Identities=30% Similarity=0.492 Sum_probs=438.1
Q ss_pred eEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH
Q 009618 71 TLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV 150 (530)
Q Consensus 71 ~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 150 (530)
+++++||+||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcH
Q 009618 151 GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTP 230 (530)
Q Consensus 151 ~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 230 (530)
.|+..+++.++||++.++++.+...+.. .+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|
T Consensus 85 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp 163 (484)
T 3ros_A 85 EEVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVP 163 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCh
Confidence 9999999999999999988877654433 467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618 231 LTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310 (530)
Q Consensus 231 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~ 310 (530)
+++..|++++.++|+|+|++|+|+|++.+.++ |+.||+|++|+||||+.+|+.|++.+++++||+++|||||||+||++
T Consensus 164 ~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~ 242 (484)
T 3ros_A 164 GSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLD 242 (484)
T ss_dssp HHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEECT
T ss_pred HHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcceeCC
Confidence 99999999999999999999999998778888 99999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHH
Q 009618 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVED 390 (530)
Q Consensus 311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~ 390 (530)
|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++||+++..+++++.+++++
T Consensus 243 dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~ 322 (484)
T 3ros_A 243 DADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKE 322 (484)
T ss_dssp TCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHH
Q 009618 391 AVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470 (530)
Q Consensus 391 a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~ 470 (530)
++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++
T Consensus 323 a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a 402 (484)
T 3ros_A 323 AIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRA 402 (484)
T ss_dssp HHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHH
T ss_pred HHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHH
Confidence 99999999999986444679999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 471 ~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++++++++|+||||++....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 403 ~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 403 KKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp HHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred HHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 9999999999999999877788999999999999999999999999999999876
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-104 Score=850.10 Aligned_cols=469 Identities=29% Similarity=0.495 Sum_probs=444.0
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..++||||+|+. ++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 23 ~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 100 (500)
T 2j6l_A 23 ENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQV 100 (500)
T ss_dssp EEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999995 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||..+++.|+..+++.++|+++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++
T Consensus 101 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 180 (500)
T 2j6l_A 101 LGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAI 180 (500)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHH
Confidence 99999999999999999999999999999999887776665444334556678899999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHH----HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELAL----QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 181 ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~~a 259 (500)
T 2j6l_A 181 AMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV 259 (500)
T ss_dssp HHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHH
T ss_pred HHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHh
Confidence 9999999999999999999999888765 56999999999999 788999999999999999999999999999999
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
++++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.|++
T Consensus 260 a~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 339 (500)
T 2j6l_A 260 QERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPN 339 (500)
T ss_dssp HHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIH 449 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~ 449 (530)
+++||++++.+++++.+++++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 340 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 419 (500)
T 2j6l_A 340 VLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEEVFA 419 (500)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCHHHHHH
T ss_pred CccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999976433579999999999999999999999999999999999999999
Q ss_pred HHHcCCCCcEEEEEcCCHHHHHHHH--hhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 450 MANDTNAGLAAYIFTNNLQRTWRVS--EALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 450 ~~n~~~~gL~a~v~s~d~~~~~~~a--~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++|+++|||+++|||+|.+++++++ .++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|+++
T Consensus 420 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 498 (500)
T 2j6l_A 420 WNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRSTCTIN 498 (500)
T ss_dssp HHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEEEEEE
T ss_pred HHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999 779999999998765 346899999999999999999999999999999875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-104 Score=843.94 Aligned_cols=462 Identities=34% Similarity=0.567 Sum_probs=441.6
Q ss_pred cceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHH
Q 009618 56 QGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELG 135 (530)
Q Consensus 56 ~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la 135 (530)
++||||+|+.+.+ +++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+++.++|+
T Consensus 6 ~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 83 (475)
T 1euh_A 6 KNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIG 83 (475)
T ss_dssp CEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999998633 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCC----cee-EEEEeeceEEEEECCCCcchHHHHHH
Q 009618 136 QLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPD----RRL-FVLKQPVGVAGAITPWNFPLAMITRK 210 (530)
Q Consensus 136 ~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g----~~~-~~~~~P~GVv~~i~p~n~P~~~~~~~ 210 (530)
+++++|+|||..+++.|+..+++.++||++.++++.+...+...++ ... ++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 163 (475)
T 1euh_A 84 AILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 163 (475)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHH
Confidence 9999999999999999999999999999999887766544433234 466 89999999999999999999999999
Q ss_pred HhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh
Q 009618 211 VGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA 290 (530)
Q Consensus 211 l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a 290 (530)
+++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 164 ~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 243 (475)
T 1euh_A 164 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG 243 (475)
T ss_dssp HHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTT
T ss_pred HHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999887
Q ss_pred cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCc
Q 009618 291 GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGV 370 (530)
Q Consensus 291 ~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 370 (530)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.| ++
T Consensus 244 --~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~-~~ 320 (475)
T 1euh_A 244 --MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DA 320 (475)
T ss_dssp --TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGG-TC
T ss_pred --CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCCccc-cC
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 371 VQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 371 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
++||+++..+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 321 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eai~~ 397 (475)
T 1euh_A 321 DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEI 397 (475)
T ss_dssp SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHHHHHHH
Confidence 9999999999999999999999999999999976 3699999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECC-CCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNE-GLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~-~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+|+++|||+++|||+|.++++++++++++|+|+||+ +....+.+||||+|+||+|+++|++|+++|++.|+|+++
T Consensus 398 an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 473 (475)
T 1euh_A 398 SNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 473 (475)
T ss_dssp HHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEEe
Confidence 999999999999999999999999999999999999 666678999999999999999999999999999999875
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-103 Score=847.52 Aligned_cols=467 Identities=31% Similarity=0.513 Sum_probs=442.6
Q ss_pred ccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+ +++++++||+ ||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 115 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRE 115 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999964 6799999999 6999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||+.+++.|+..+++.++||++.++++.+...+ ...++...++.++|+|||++|+|||||+.+.+++++
T Consensus 116 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 195 (516)
T 1uzb_A 116 LEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIV 195 (516)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 9999999999999999999999999999999999888776533 223456778999999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh--
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA-- 290 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a-- 290 (530)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.+++++|++||+|++|+||||+.+|+.|++.++
T Consensus 196 ~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~ 275 (516)
T 1uzb_A 196 GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRL 275 (516)
T ss_dssp HHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSC
T ss_pred HHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999977889999999999999999999999999999998
Q ss_pred ----cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618 291 ----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366 (530)
Q Consensus 291 ----~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 366 (530)
+++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 276 ~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p- 354 (516)
T 1uzb_A 276 APGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA- 354 (516)
T ss_dssp CTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCG-
T ss_pred cccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCCCC-
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHH
Q 009618 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEE 446 (530)
Q Consensus 367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~e 446 (530)
++++++||++++.+++++.+++++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 355 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~e 433 (516)
T 1uzb_A 355 EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAE 433 (516)
T ss_dssp GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHH
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCCHHH
Confidence 99999999999999999999999999998 89999976323479999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCC-CCChHHHHHhhheeeEEE
Q 009618 447 AIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVC 523 (530)
Q Consensus 447 ai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~ 523 (530)
||+++|+++|||+++|||+|.++++++++++++|+||||+... ..+.+||||+|.||+| +++|.+++++|++.|+|+
T Consensus 434 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~ 513 (516)
T 1uzb_A 434 ALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513 (516)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEE
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCeeEEE
Confidence 9999999999999999999999999999999999999998654 3568999999999999 479999999999999998
Q ss_pred Ee
Q 009618 524 LG 525 (530)
Q Consensus 524 ~~ 525 (530)
++
T Consensus 514 ~~ 515 (516)
T 1uzb_A 514 ER 515 (516)
T ss_dssp EE
T ss_pred ec
Confidence 74
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-104 Score=848.51 Aligned_cols=463 Identities=31% Similarity=0.508 Sum_probs=442.6
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH-hhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+. ++++++||+||+++++++.++.+|++.++++|++||+ .|+.++..+|.++|++++++|++++++
T Consensus 19 ~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 96 (501)
T 1uxt_A 19 YPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDV 96 (501)
T ss_dssp ECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4579999999863 8899999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCC--CC--CceeEEEEeeceEEEEECCCCcchHHHHH
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LP--DRRLFVLKQPVGVAGAITPWNFPLAMITR 209 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~--~~--g~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 209 (530)
|++++++|+|||..+++.|+..+++.++||++.++++.+...+.. .. +...++.++|+|||++|+|||||+.+.++
T Consensus 97 la~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (501)
T 1uxt_A 97 FAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVN 176 (501)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHH
Confidence 999999999999999999999999999999998888766654432 22 33678999999999999999999999999
Q ss_pred HHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHH
Q 009618 210 KVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGA 289 (530)
Q Consensus 210 ~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~ 289 (530)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+|++|+||||+.+|+.|++.+
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~~a 255 (501)
T 1uxt_A 177 KITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVVKVG 255 (501)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999977 8899999999999999999999999999988
Q ss_pred hcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCC
Q 009618 290 AGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEG 369 (530)
Q Consensus 290 a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 369 (530)
+ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.|++
T Consensus 256 a--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 333 (501)
T 1uxt_A 256 G--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPT 333 (501)
T ss_dssp C--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred C--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCccccC
Confidence 7 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC-ceEeceEecCCC---CCCcccccccccceEEEEEeCCHH
Q 009618 370 VVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM-TFYEPTVLSNVK---SEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 370 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~-~~~~Ptvl~~~~---~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
+++||++++.+++++.+++++++.+|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|+|+|
T Consensus 334 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~~~~d 410 (501)
T 1uxt_A 334 VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKDLD 410 (501)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEeeCCHH
Confidence 99999999999999999999999999999999976 36 899999999999 999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCC-CCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~-~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++ ....+.+||||+|+||+|+++|.+|+++|++.|+|++
T Consensus 411 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~~ 490 (501)
T 1uxt_A 411 QAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 490 (501)
T ss_dssp HHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEEEE
T ss_pred HHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCceeEEEE
Confidence 999999999999999999999999999999999999999987 5567889999999999999999999999999999987
Q ss_pred e
Q 009618 525 G 525 (530)
Q Consensus 525 ~ 525 (530)
+
T Consensus 491 ~ 491 (501)
T 1uxt_A 491 N 491 (501)
T ss_dssp E
T ss_pred e
Confidence 6
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-103 Score=842.28 Aligned_cols=470 Identities=32% Similarity=0.540 Sum_probs=445.2
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|
T Consensus 6 ~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 85 (486)
T 1t90_A 6 LKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHKEEL 85 (486)
T ss_dssp CCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45799999998767789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
++++++|+|||+.+++.|+..+++.++||+...+.+.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 86 a~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 165 (486)
T 1t90_A 86 AHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMA 165 (486)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHHHHH
Confidence 99999999999999999999999999999987777666544322235667899999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.++.|++||+|++|+||||+.+|+.|++.+++++|
T Consensus 166 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa~~~~ 244 (486)
T 1t90_A 166 IALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLK 244 (486)
T ss_dssp HHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999999999999 56789999999999999999999999999999999999
Q ss_pred eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCe-EEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 295 KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANR-VLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 295 ~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~-v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
|+++|||||||+||++|||++.|++.+++++|.|+||.|++++| +|||++ +|+|+++|+++++++++|+|+++++++|
T Consensus 245 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~~~~~g 323 (486)
T 1t90_A 245 RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDDGVFLG 323 (486)
T ss_dssp EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTSTTCCBC
T ss_pred cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCccCCccC
Confidence 99999999999999999999999999999999999999999999 999999 9999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAN 452 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n 452 (530)
|+++..+++++.+++++++.+|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|
T Consensus 324 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~~aN 403 (486)
T 1t90_A 324 PVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIAN 403 (486)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999997432 2479999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC-CCCCcccCCCCCCCC--CCChHHHHHhhheeeEEEEec
Q 009618 453 DTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS-TEVAPFGGVKQSGLG--REGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 453 ~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~-~~~~pfGG~~~SG~G--~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++|||+++|||+|.++++++++++++|+||||++... .+.+||||+|.||+| +++|++|+++|++.|+|+++.
T Consensus 404 ~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~~~ 480 (486)
T 1t90_A 404 KSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTARY 480 (486)
T ss_dssp HSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEEEC
T ss_pred CCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 99999999999999999999999999999999986543 468999999999999 899999999999999998763
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-103 Score=842.79 Aligned_cols=464 Identities=36% Similarity=0.591 Sum_probs=421.9
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+.++++++++||+||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 87 (478)
T 3ty7_A 8 TKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDDI 87 (478)
T ss_dssp CEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999999878899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 135 GQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a-~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
++++++|+|||..++ ..|+..+++.++||++.+.+..+... +...++.++|+|||++|+|||||+.+.++++++
T Consensus 88 a~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (478)
T 3ty7_A 88 VQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLAA 162 (478)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999 78999999999999999887655431 245788999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|++++++.++++.|+.||+|++|+||||+.+|+.|++.+++++
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa~~~ 242 (478)
T 3ty7_A 163 AFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAAKDF 242 (478)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTTTTT
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++|
T Consensus 243 ~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~g 322 (478)
T 3ty7_A 243 KKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVG 322 (478)
T ss_dssp CEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-C--CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRH-S--LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHM 450 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-~--~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~ 450 (530)
|+++..+++++++++++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 323 pli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~ 402 (478)
T 3ty7_A 323 PIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQI 402 (478)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHHHHHH
Confidence 99999999999999999999999999999432 1 35799999999999999999999999999999999999999999
Q ss_pred HHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEE
Q 009618 451 ANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 451 ~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 524 (530)
+|+++|||+++|||+|.++++++++++++|+||||+ ....+.+||||+|.||+|+++|++|+++|++.|+|+.
T Consensus 403 an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 403 ANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999 5556789999999999999999999999999999873
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-102 Score=828.17 Aligned_cols=457 Identities=35% Similarity=0.544 Sum_probs=439.0
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (530)
Q Consensus 68 ~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (530)
+..+++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 84 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIK 84 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCC
Q 009618 148 EAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSE 227 (530)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~ 227 (530)
+++.|+..+++.++||++.+.+..+.. +...++...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 85 ~a~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~ 163 (462)
T 3etf_A 85 QARAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAP 163 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 999999999999999999998877665 3333466789999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEE
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCI 307 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~i 307 (530)
.+|+++..+++++.++|+|+|++|+|++ +.+.+..|+.||+|++|+||||+.+|+.|++.+++++||+++|+|||||+|
T Consensus 164 ~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~i 242 (462)
T 3etf_A 164 NVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI 242 (462)
T ss_dssp TCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCccE
Confidence 9999999999999999999999999998 567889999999999999999999999999999999999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHH
Q 009618 308 VFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 308 V~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++
T Consensus 243 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~ 322 (462)
T 3etf_A 243 VLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQ 322 (462)
T ss_dssp ECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCH
Q 009618 388 VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 388 i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~ 467 (530)
+++++.+|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 323 i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~ 402 (462)
T 3etf_A 323 VQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADD 402 (462)
T ss_dssp HHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCH
T ss_pred HHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 99999999999999986544579999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 468 QRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++++++++++++|+||||++....+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 403 ~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 403 TLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp HHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999998877889999999999999999999999999999998865
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-101 Score=832.60 Aligned_cols=472 Identities=23% Similarity=0.349 Sum_probs=440.8
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
....++||||+|+.+ +..+.++||.| |+++++++.++.+|++.|+++|++||+.|+.++..+|+++|++++++|+++
T Consensus 61 ~~~~~~~I~G~~~~~--~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~ 138 (563)
T 4e3x_A 61 TEAIPCVVGDEEVWT--SDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGP 138 (563)
T ss_dssp CEECCEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCeEECCEEeec--CCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 345679999999985 45788999998 899999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 131 -KEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 131 -~~~la~~~~~e~Gk~~~~a~~E-v~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
+++|+.++++|+|||+.+++.| +..++++++||+..+.++.+.......++...+.++.|+|||++|+|||||+....
T Consensus 139 ~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~ 218 (563)
T 4e3x_A 139 RRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGN 218 (563)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHH
T ss_pred cHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHH
Confidence 9999999999999999999987 99999999999999988876532222223445667778899999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++|| +||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.
T Consensus 219 ~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~ 297 (563)
T 4e3x_A 219 LAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQ 297 (563)
T ss_dssp HHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 9999999 599999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred Hhcccc------eEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618 289 AAGTVK------KVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 362 (530)
Q Consensus 289 ~a~~~~------~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 362 (530)
+++++| |+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 298 aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 298 VAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp HHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred HHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 999888 59999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-CCCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEE
Q 009618 363 GDG-FGEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLC 440 (530)
Q Consensus 363 G~p-~~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~ 440 (530)
|+| .|+++++||++++.+++++.++|+++++ +|+++++||......|+|++|||+.+++++|++++||+||||++|++
T Consensus 378 Gdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~ 457 (563)
T 4e3x_A 378 GDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457 (563)
T ss_dssp SCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEEEE
T ss_pred CCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEEEE
Confidence 999 9999999999999999999999999996 89999999987544579999999999999999999999999999999
Q ss_pred eCC--HHHHHHHH-HcCCCCcEEEEEcCCHHHHHHHHhhcc--ceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHH
Q 009618 441 FKT--EEEAIHMA-NDTNAGLAAYIFTNNLQRTWRVSEALE--YGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYG 512 (530)
Q Consensus 441 ~~~--~~eai~~~-n~~~~gL~a~v~s~d~~~~~~~a~~l~--~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~ 512 (530)
|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||+.... .+.+||||+|.||+| +++|+++
T Consensus 458 ~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~~~ 537 (563)
T 4e3x_A 458 YPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGPHY 537 (563)
T ss_dssp ECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTSTTG
T ss_pred ECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCHHH
Confidence 997 79999999 799999999999999999999999976 999999997643 467999999999998 8899999
Q ss_pred HHhhheeeEEEEec
Q 009618 513 MDEFLEIKYVCLGD 526 (530)
Q Consensus 513 l~~~~~~k~v~~~~ 526 (530)
|++|++.|+|....
T Consensus 538 l~~~~~~k~v~~~~ 551 (563)
T 4e3x_A 538 ILRWTSPQVIKETH 551 (563)
T ss_dssp GGGGBCCEEEEEEC
T ss_pred HHHhCceEEEEEeC
Confidence 99999999998763
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-99 Score=812.55 Aligned_cols=461 Identities=30% Similarity=0.456 Sum_probs=436.5
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEEL 134 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l 134 (530)
.++||||+|+.+ ++.+++++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|
T Consensus 6 ~~~~I~G~~~~~-~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 84 (490)
T 3ju8_A 6 STHYIAGQWLAG-QGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADEL 84 (490)
T ss_dssp CCEEETTEEECC-CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceECCEEecC-CCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999986 3578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhH
Q 009618 135 GQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPA 214 (530)
Q Consensus 135 a~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 214 (530)
++++++|+|||..+++.|+..+++.++|++...+...+...+.. .+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 85 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 163 (490)
T 3ju8_A 85 ARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPA 163 (490)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEE-TTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999998887766544321 24456778999999999999999999999999999
Q ss_pred hhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccc
Q 009618 215 LACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVK 294 (530)
Q Consensus 215 LaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~ 294 (530)
|++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.+.+++|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 164 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~~~ 242 (490)
T 3ju8_A 164 LLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242 (490)
T ss_dssp HHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTCTT
T ss_pred HHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999 67899999999999999999999999999999999999
Q ss_pred eE-EeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhh-HHHHHHHHHHHhhccccCC-CCCCCcc
Q 009618 295 KV-SLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGI-YEKFADAFSKAVKNLKVGD-GFGEGVV 371 (530)
Q Consensus 295 ~~-~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i-~d~f~~~l~~~~~~~~~G~-p~~~~~~ 371 (530)
|+ ++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.|++++
T Consensus 243 ~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~ 322 (490)
T 3ju8_A 243 KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPF 322 (490)
T ss_dssp SEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSCCS
T ss_pred CcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCcCc
Confidence 98 8999999999999999999999999999999999999999999999996 9999999999999999999 9999999
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 372 QGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 372 ~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
+||+++..+++++.+++++++++|+++++||...+.+|+|++|||+. ++++|++++||+||||++|++|+|+||||+++
T Consensus 323 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~a 401 (490)
T 3ju8_A 323 MGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIREA 401 (490)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999997654467999999999 99999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++|++.|+|+++
T Consensus 402 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 402 NATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred hcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 99999999999999999999999999999999999765 4578999999999984 58999999999875
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-99 Score=861.72 Aligned_cols=471 Identities=30% Similarity=0.453 Sum_probs=448.3
Q ss_pred ccccceecCEeeeCCCCCeEEeecCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhH
Q 009618 53 LRTQGLIGGKWIDAYDGKTLEVHNPAT-GEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHK 131 (530)
Q Consensus 53 ~~~~~~i~G~~~~~~~~~~~~v~~P~~-g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~ 131 (530)
...++||||+|+.+ +++++++||.| ++++++++.++.+|++.|+++|++||+.|+.++..+|+++|++++++|++++
T Consensus 530 ~~~~~~I~G~~~~~--~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eRa~iL~~~Adll~~~~ 607 (1026)
T 4f9i_A 530 KTYPLFINGKEVRT--NDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRL 607 (1026)
T ss_dssp EEECEEETTEEECC--SCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccCceECCEEecC--CCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 45678999999974 78999999998 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 132 EELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 132 ~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
++|+.++++|+|||+.++..|+..++++|+||+..++++.+...+...++..+++.++|+|||++|+|||||+.+.++++
T Consensus 608 ~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~ 687 (1026)
T 4f9i_A 608 FELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMA 687 (1026)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999988876544433457788899999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a- 290 (530)
++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+.+|+.|++.++
T Consensus 688 a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~ 767 (1026)
T 4f9i_A 688 SAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAK 767 (1026)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTS
T ss_pred HHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred -----cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 291 -----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 291 -----~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
+++||+++|+|||||+||++|||+|.|++.+++|+|.|+||.|+|++|+|||++++|+|+++|+++++++++|+|
T Consensus 768 ~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG~p 847 (1026)
T 4f9i_A 768 VHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPS 847 (1026)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCT
T ss_pred ccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
.|+++++||+|+..+++++.++|++++.+| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 848 ~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d~d 926 (1026)
T 4f9i_A 848 EDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFD 926 (1026)
T ss_dssp TSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred ccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCCHH
Confidence 999999999999999999999999999998 9999997654337999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCC-CChHHHHHhhheeeEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGR-EGSKYGMDEFLEIKYV 522 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~-~~g~~~l~~~~~~k~v 522 (530)
|||+++|+++|||+++|||+|.++++++++++++|+||||+...+ .+.+||||+|.||+|+ +||+++|++|++.|+|
T Consensus 927 eAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v 1006 (1026)
T 4f9i_A 927 QAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPRVV 1006 (1026)
T ss_dssp HHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEEEE
T ss_pred HHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEEEE
Confidence 999999999999999999999999999999999999999997654 3679999999999995 5999999999999999
Q ss_pred EEec
Q 009618 523 CLGD 526 (530)
Q Consensus 523 ~~~~ 526 (530)
+++.
T Consensus 1007 ~~~~ 1010 (1026)
T 4f9i_A 1007 TENT 1010 (1026)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8764
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-100 Score=811.30 Aligned_cols=454 Identities=29% Similarity=0.433 Sum_probs=429.9
Q ss_pred CCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618 68 DGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (530)
Q Consensus 68 ~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (530)
..++++++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++|+++|++++++|+||+.
T Consensus 4 ~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 82 (474)
T 4h7n_A 4 MTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS- 82 (474)
T ss_dssp CCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-
T ss_pred CCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecC
Q 009618 148 EAVGEVDYGAKFIEFYAEEAKRVYGEI-IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPS 226 (530)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~g~~-~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps 226 (530)
++..|+..+++.+++|+..+.+..... .+...++......++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 83 ~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps 162 (474)
T 4h7n_A 83 ITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPS 162 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccc
Confidence 556899999999999998887765432 2333456667788999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccE
Q 009618 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPC 306 (530)
Q Consensus 227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~ 306 (530)
+.+|+++..+++++.++|+|+|++|++++ +.+.+..|+.| +++|+||||+.+|+.|++.+++++||+++|||||||+
T Consensus 163 ~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~ 239 (474)
T 4h7n_A 163 EIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPA 239 (474)
T ss_dssp TTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEE
T ss_pred ccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCcc
Confidence 99999999999999999999999999999 66888899876 8999999999999999999999999999999999999
Q ss_pred EEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHH
Q 009618 307 IVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVET 386 (530)
Q Consensus 307 iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~ 386 (530)
||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|.++++++++|+|.++++++||+++..+.+++.+
T Consensus 240 iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 319 (474)
T 4h7n_A 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIND 319 (474)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHH
T ss_pred ccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCeEeeCCcccC-CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcC
Q 009618 387 FVEDAVSKGAKVLLGGRRHS-LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN 465 (530)
Q Consensus 387 ~i~~a~~~Ga~vl~gg~~~~-~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~ 465 (530)
++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+
T Consensus 320 ~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 399 (474)
T 4h7n_A 320 HILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAG 399 (474)
T ss_dssp HHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECS
T ss_pred HHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeC
Confidence 99999999999999998765 56899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618 466 NLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 466 d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~ 525 (530)
|.++++++++++++|+|+||+.... .+.+||||+|.||+| +++|.+|+++|++.|+|+++
T Consensus 400 d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~ 462 (474)
T 4h7n_A 400 SEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIK 462 (474)
T ss_dssp SHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEE
T ss_pred CHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEEC
Confidence 9999999999999999999987653 457999999999998 78999999999999999886
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-98 Score=811.38 Aligned_cols=464 Identities=22% Similarity=0.326 Sum_probs=425.1
Q ss_pred ccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHh-cHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDA-FNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A-~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++||||+|+.+.+ .+++++||.||+++++++.++ +|++.|+++|++| |+.|+.++..+|.++|++++++|++++++
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 85 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGD 85 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 45799999997643 589999999999999999988 9999999999999 59999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC-------cccCCCCCCc-eeEEEEeec-eEEEEECCCCcch
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYG-------EIIPATLPDR-RLFVLKQPV-GVAGAITPWNFPL 204 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g-------~~~~~~~~g~-~~~~~~~P~-GVv~~i~p~n~P~ 204 (530)
|++++++|+|||..+++.|+..+++.++||+..++++.+ ...+...++. ..+..++|+ |||++|+|||||+
T Consensus 86 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~ 165 (534)
T 2y53_A 86 YYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPS 165 (534)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHH
Confidence 999999999999999999999999999999998876643 2122222222 457889997 9999999999999
Q ss_pred HHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC-CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618 205 AMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG-IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (530)
Q Consensus 205 ~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (530)
.++++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++.| +++++|+||||+.+|+
T Consensus 166 ~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~~G~ 242 (534)
T 2y53_A 166 WGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSADTAA 242 (534)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999 79999999998654444333 5799999999999999
Q ss_pred HHHHHHh--cccceEEeecCCCccEEEecCC-----CHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHH
Q 009618 284 KLMAGAA--GTVKKVSLELGGNAPCIVFDDA-----DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKA 356 (530)
Q Consensus 284 ~i~~~~a--~~~~~~~lelgG~~~~iV~~dA-----D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 356 (530)
.|++.++ +++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++
T Consensus 243 ~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 322 (534)
T 2y53_A 243 TLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAK 322 (534)
T ss_dssp HHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHH
T ss_pred HHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHHHH
Confidence 9998875 8899999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred hhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCccc-----C-CCCceEeceEecCCCCC--Ccccc
Q 009618 357 VKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRH-----S-LGMTFYEPTVLSNVKSE--MLVSR 428 (530)
Q Consensus 357 ~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~-----~-~~~~~~~Ptvl~~~~~~--~~~~~ 428 (530)
++++++|+|+|+++++||++++.+++++.++++++ .+|+++++||... + ..|+|++|||+.+++++ |++++
T Consensus 323 ~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~i~~ 401 (534)
T 2y53_A 323 LAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHD 401 (534)
T ss_dssp HTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSSTTT
T ss_pred HHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCHHHh
Confidence 99999999999999999999999999999999999 6899999999742 1 24799999999999887 68999
Q ss_pred cccccceEEEEEeC---CH-----HHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc--cceEEEECCCCC---------
Q 009618 429 EEVFGPVAPLLCFK---TE-----EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL--EYGLVGVNEGLI--------- 489 (530)
Q Consensus 429 eE~FGPv~~i~~~~---~~-----~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l--~~G~v~vN~~~~--------- 489 (530)
||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||++..
T Consensus 402 eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~~~~ 481 (534)
T 2y53_A 402 VEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGN 481 (534)
T ss_dssp CCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCCSSC
T ss_pred CCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccccCC
Confidence 99999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred CCCCCcccCCCCCCCCCC-ChHHHHHhhheeeEEEE
Q 009618 490 STEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYVCL 524 (530)
Q Consensus 490 ~~~~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v~~ 524 (530)
..+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 482 ~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 482 VMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred CCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 246899999999999999 79999999999999875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-96 Score=780.69 Aligned_cols=445 Identities=25% Similarity=0.388 Sum_probs=402.8
Q ss_pred CCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHH
Q 009618 69 GKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE 148 (530)
Q Consensus 69 ~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 148 (530)
-..+++.||.||+++++++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+
T Consensus 5 ~~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 84 (457)
T 3lns_A 5 HHHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDV 84 (457)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHH
T ss_pred cccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHhCcc-cCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEee
Q 009618 149 AV-GEVDYGAKFIEFYAEEAKRVYGEI-IPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224 (530)
Q Consensus 149 a~-~Ev~~~~~~l~~~a~~~~~~~g~~-~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlK 224 (530)
++ .|+..+++.++|+++..+++.+.. .+. ...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|
T Consensus 85 a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlK 164 (457)
T 3lns_A 85 VDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIK 164 (457)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEE
Confidence 98 599999999999999988765432 211 12356788999999999999999999999999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCc
Q 009618 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA 304 (530)
Q Consensus 225 ps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~ 304 (530)
||+.+|+++..+++++.++ +|+|++|+|+| +.+.+.+|++ ++|++|+||||+.+|+.|++.+++++||+++||||||
T Consensus 165 ps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~ 241 (457)
T 3lns_A 165 PSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKC 241 (457)
T ss_dssp CCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCE
T ss_pred CCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCC
Confidence 9999999999999999999 99999999999 6788999998 7899999999999999999999999999999999999
Q ss_pred cEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHH
Q 009618 305 PCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKV 384 (530)
Q Consensus 305 ~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~ 384 (530)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++++++++
T Consensus 242 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv 316 (457)
T 3lns_A 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQRL 316 (457)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHHHH
T ss_pred CCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987 7776 99999999999999
Q ss_pred HHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHc-CCCCcEEEEE
Q 009618 385 ETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMAND-TNAGLAAYIF 463 (530)
Q Consensus 385 ~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~-~~~gL~a~v~ 463 (530)
.++++++ ++++++||... .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++||
T Consensus 317 ~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~ 392 (457)
T 3lns_A 317 VSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVF 392 (457)
T ss_dssp HHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEE
T ss_pred HHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEE
Confidence 9999975 36999999764 35799999999999999999999999999999999999999999999 9999999999
Q ss_pred cCCHHHHHHHHhhccceEEEECCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 464 TNNLQRTWRVSEALEYGLVGVNEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 464 s~d~~~~~~~a~~l~~G~v~vN~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++|++.|+|++.
T Consensus 393 t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 393 GKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp CSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred CCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999999754 467899999999999999999999999999999863
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-95 Score=769.83 Aligned_cols=428 Identities=29% Similarity=0.444 Sum_probs=397.6
Q ss_pred CCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHH
Q 009618 89 MGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEA 167 (530)
Q Consensus 89 ~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~ 167 (530)
.+.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++ .|+..++..++|+++..
T Consensus 15 ~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~ 94 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKL 94 (469)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46779999999999999999999999999999999999999999999999999999999997 59999999999988777
Q ss_pred HHHhCcccC---CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618 168 KRVYGEIIP---ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (530)
Q Consensus 168 ~~~~g~~~~---~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 244 (530)
......... ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a- 173 (469)
T 3sza_A 95 PEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY- 173 (469)
T ss_dssp HHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-
T ss_pred HhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-
Confidence 655432211 1122456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHH
Q 009618 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAA 324 (530)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s 324 (530)
+|+|++|+|+|+ .+.+..|+.| +|++|+||||+.+|+.|++.+++++||+++|||||||+||++|||+|.|++.++++
T Consensus 174 lP~gvv~vv~g~-~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~ 251 (469)
T 3sza_A 174 LDKDLYPVINGG-VPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWG 251 (469)
T ss_dssp SCTTTSCBCCCS-HHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHH
T ss_pred CCcceEEEEECC-HHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHH
Confidence 999999999994 4555678887 89999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618 325 KFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404 (530)
Q Consensus 325 ~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~ 404 (530)
+|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||+++..+++++.+++ +|+++++||..
T Consensus 252 ~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~ 325 (469)
T 3sza_A 252 KFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTG 325 (469)
T ss_dssp HHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCE
T ss_pred HHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCcc
Confidence 999999999999999999999999999999999998 699999999999999999999999998 69999999987
Q ss_pred cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEE
Q 009618 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGV 484 (530)
Q Consensus 405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~v 484 (530)
. .+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|||
T Consensus 326 ~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~v 404 (469)
T 3sza_A 326 D-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAA 404 (469)
T ss_dssp E-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEE
T ss_pred C-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 5 357999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 485 NEGLI--STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 485 N~~~~--~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|++.. ..+.+||||+|+||+|+++|.+|+++|++.|+|+++.
T Consensus 405 N~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 405 NDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp SCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred eCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 99863 4678999999999999999999999999999998873
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-94 Score=779.22 Aligned_cols=454 Identities=25% Similarity=0.323 Sum_probs=416.2
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~-~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
....++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEAR 101 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHh
Confidence 34567899999998532 99999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH--hCccc----CCC--CCCceeEEEEeeceEEEEECCCCc
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRV--YGEII----PAT--LPDRRLFVLKQPVGVAGAITPWNF 202 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~--~g~~~----~~~--~~g~~~~~~~~P~GVv~~i~p~n~ 202 (530)
+++|++++++|+|||+.+++.|+..+++.++||++.+++. .+... +.. .++...++.++|+|||++|+||||
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 181 (528)
T 3v4c_A 102 AEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNF 181 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECCCcc
Confidence 9999999999999999999999999999999999998772 23222 111 123457889999999999999999
Q ss_pred chHHHH--HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHH----HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEee
Q 009618 203 PLAMIT--RKVGPALACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFT 276 (530)
Q Consensus 203 P~~~~~--~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ft 276 (530)
|+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.+++++|+.||+|++|+||
T Consensus 182 P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V~fT 261 (528)
T 3v4c_A 182 PLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFT 261 (528)
T ss_dssp TTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEE
Confidence 999865 99999999999999999999999999998865 578999999999999888999999999999999999
Q ss_pred CCHHHHHHHHHHHhccc--ceEEeecCCCccEEEecCC---CHHHHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHH
Q 009618 277 GSTAVGKKLMAGAAGTV--KKVSLELGGNAPCIVFDDA---DLNVAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFA 350 (530)
Q Consensus 277 Gs~~~g~~i~~~~a~~~--~~~~lelgG~~~~iV~~dA---D~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~-i~d~f~ 350 (530)
||+.+|+.|++.+++++ ||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +||+|+
T Consensus 262 GS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~ 341 (528)
T 3v4c_A 262 GSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFT 341 (528)
T ss_dssp SCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHHHHHH
T ss_pred CChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHHHHHH
Confidence 99999999999999998 9999999999999999999 88999999999999999999999999999997 999999
Q ss_pred HHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCC---Cccc
Q 009618 351 DAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVS 427 (530)
Q Consensus 351 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~---~~~~ 427 (530)
++|+++++++++| +.+||+++..+.+++.++++ .+|+++++||.. .|+|++|||+.+++++ |+++
T Consensus 342 ~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~~~i~ 409 (528)
T 3v4c_A 342 TAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLADHAL 409 (528)
T ss_dssp HHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHHCGGG
T ss_pred HHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCcccccChhh
Confidence 9999999998754 67899998888887777764 489999999975 4799999999988887 8999
Q ss_pred ccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcC--CHHHHHHHHhhcc--ceEEEECCCCC---CCCCCcccC-C
Q 009618 428 REEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLI---STEVAPFGG-V 499 (530)
Q Consensus 428 ~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~--d~~~~~~~a~~l~--~G~v~vN~~~~---~~~~~pfGG-~ 499 (530)
+||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++.. ..+.+|||| +
T Consensus 410 ~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pfGG~~ 489 (528)
T 3v4c_A 410 GEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVHGGPY 489 (528)
T ss_dssp GCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCCCCTT
T ss_pred cccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999 8999999999998 99999999765 357899999 9
Q ss_pred CCCCCCCCC--hHHHHHhhheeeEE
Q 009618 500 KQSGLGREG--SKYGMDEFLEIKYV 522 (530)
Q Consensus 500 ~~SG~G~~~--g~~~l~~~~~~k~v 522 (530)
|.||+|+++ |++|+++|++.|++
T Consensus 490 ~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 490 PASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp TTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCcHHHHHHhchhHHh
Confidence 999999985 99999999999975
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-92 Score=757.67 Aligned_cols=443 Identities=20% Similarity=0.254 Sum_probs=408.4
Q ss_pred CCCCeEEeecCCCCCEE-EEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Q 009618 67 YDGKTLEVHNPATGEVI-ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP 145 (530)
Q Consensus 67 ~~~~~~~v~~P~~g~~i-~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~ 145 (530)
.++++++++||+||+++ ++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||
T Consensus 4 ~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 83 (510)
T 1ez0_A 4 QTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALP 83 (510)
T ss_dssp -CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred CCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 35788999999999999 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HhCccc----CCCCC-C-ceeEEEEeeceEEEEECCCCcchHHH--HHHHhhHh
Q 009618 146 LKEAVGEVDYGAKFIEFYAEEAKR--VYGEII----PATLP-D-RRLFVLKQPVGVAGAITPWNFPLAMI--TRKVGPAL 215 (530)
Q Consensus 146 ~~~a~~Ev~~~~~~l~~~a~~~~~--~~g~~~----~~~~~-g-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l~~AL 215 (530)
..+++.|+..+++.++||++.+++ ..+..+ +...+ + ...++.++|+|||++|+|||||+.+. ++++++||
T Consensus 84 ~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~AL 163 (510)
T 1ez0_A 84 EVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASAL 163 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHH
Confidence 999999999999999999998876 433322 11111 1 24678999999999999999999985 49999999
Q ss_pred hcCCEEEeecCCCcHHHHHHHHHHH----HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc
Q 009618 216 ACGCTVVVKPSEFTPLTALAAAELA----LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291 (530)
Q Consensus 216 aaGN~VVlKps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~ 291 (530)
++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++.+++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 243 (510)
T 1ez0_A 164 AAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHE 243 (510)
T ss_dssp HHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhc
Confidence 9999999999999999999999987 568999999999999778899999999999999999999999999999998
Q ss_pred cc--ceEEeecCCCccEEEecCCCHH--HHHHHHHHHHhhccCCccccCCeEEEehh-hHHHHHHHHHHHhhccccCCCC
Q 009618 292 TV--KKVSLELGGNAPCIVFDDADLN--VAVNGALAAKFRNSGQTCVCANRVLVQEG-IYEKFADAFSKAVKNLKVGDGF 366 (530)
Q Consensus 292 ~~--~~~~lelgG~~~~iV~~dAD~~--~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~-i~d~f~~~l~~~~~~~~~G~p~ 366 (530)
++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++
T Consensus 244 ~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~---- 319 (510)
T 1ez0_A 244 RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP---- 319 (510)
T ss_dssp SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC----
T ss_pred cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC----
Confidence 86 9999999999999999999999 99999999999999999999999999999 999999999999999875
Q ss_pred CCCcccCccCCHHHHHHHHHHHHHHHH-CCCeEeeCCcccCCCCceEeceEecCCCCC---CcccccccccceEEEEEeC
Q 009618 367 GEGVVQGPLINKAALEKVETFVEDAVS-KGAKVLLGGRRHSLGMTFYEPTVLSNVKSE---MLVSREEVFGPVAPLLCFK 442 (530)
Q Consensus 367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~-~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~---~~~~~eE~FGPv~~i~~~~ 442 (530)
||++++.+.+++.+++++++. +|+++++||. . |+|++|||+.+++++ |++++||+||||++|++|+
T Consensus 320 ------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-~---g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~ 389 (510)
T 1ez0_A 320 ------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-E---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 389 (510)
T ss_dssp ------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-C---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEES
T ss_pred ------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-C---CCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeC
Confidence 688999999999999999984 8999999997 2 799999999988777 9999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCH--HHHHHHHhhc--cceEEEECCCCC---CCCCCcccC-CCCCCCCCC--ChHHH
Q 009618 443 TEEEAIHMANDTNAGLAAYIFTNNL--QRTWRVSEAL--EYGLVGVNEGLI---STEVAPFGG-VKQSGLGRE--GSKYG 512 (530)
Q Consensus 443 ~~~eai~~~n~~~~gL~a~v~s~d~--~~~~~~a~~l--~~G~v~vN~~~~---~~~~~pfGG-~~~SG~G~~--~g~~~ 512 (530)
|+||||+++|+++|||++||||+|. ++++++++++ ++|+||||++.. ..+.+|||| +|.||+|+. +|.+|
T Consensus 390 ~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~g 469 (510)
T 1ez0_A 390 NVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAEA 469 (510)
T ss_dssp SHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGGG
T ss_pred CHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHHH
Confidence 9999999999999999999999987 7999999999 799999998764 356899999 799999865 79999
Q ss_pred HHhhheeeEEE
Q 009618 513 MDEFLEIKYVC 523 (530)
Q Consensus 513 l~~~~~~k~v~ 523 (530)
+++|++.|++.
T Consensus 470 l~~~~~~k~~~ 480 (510)
T 1ez0_A 470 IHRWLRPVAYQ 480 (510)
T ss_dssp GGGGEEEEEEE
T ss_pred HHHhheEEEEc
Confidence 99999999764
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-91 Score=790.69 Aligned_cols=434 Identities=26% Similarity=0.418 Sum_probs=410.6
Q ss_pred EeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Q 009618 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAE 165 (530)
Q Consensus 86 v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~ 165 (530)
++.++.+|++.++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++..|+..++++++||+.
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~ 623 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAA 623 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCcccCC-CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcC
Q 009618 166 EAKRVYGEIIPA-TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAG 244 (530)
Q Consensus 166 ~~~~~~g~~~~~-~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aG 244 (530)
.+++..+...+. ...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|
T Consensus 624 ~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAG 703 (1001)
T 3haz_A 624 QGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAG 703 (1001)
T ss_dssp HHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred HHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhC
Confidence 998877653211 2236788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhc---ccceEEeecCCCccEEEecCCCHHHHHHHH
Q 009618 245 IPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG---TVKKVSLELGGNAPCIVFDDADLNVAVNGA 321 (530)
Q Consensus 245 lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~---~~~~~~lelgG~~~~iV~~dAD~~~a~~~i 321 (530)
+|+|++|+|+|++.+ ++.|+.||+|++|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||+|.|++.+
T Consensus 704 lP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~i 782 (1001)
T 3haz_A 704 IPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782 (1001)
T ss_dssp CCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHH
T ss_pred cCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999998777 9999999999999999999999999999886 489999999999999999999999999999
Q ss_pred HHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeC
Q 009618 322 LAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401 (530)
Q Consensus 322 ~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~g 401 (530)
++|+|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+.+++.+++++++.+| ++ +|
T Consensus 783 v~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~g 860 (1001)
T 3haz_A 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HF 860 (1001)
T ss_dssp HHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EE
T ss_pred HHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-ec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 88 88
Q ss_pred CcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCC--HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccc
Q 009618 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKT--EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEY 479 (530)
Q Consensus 402 g~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~--~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~ 479 (530)
|..+ .+|+|++|||+.+ +++.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.++++++++++++
T Consensus 861 g~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~a 937 (1001)
T 3haz_A 861 AGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQV 937 (1001)
T ss_dssp ECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCC
T ss_pred cccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCe
Confidence 8765 3579999999985 7889999999999999999996 799999999999999999999999999999999999
Q ss_pred eEEEECCCCCCC--CCCcccCCCCCCCC-CCChHHHHHhhheeeEEEEe
Q 009618 480 GLVGVNEGLIST--EVAPFGGVKQSGLG-REGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 480 G~v~vN~~~~~~--~~~pfGG~~~SG~G-~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+||||++.... +.+||||+|.||+| ++||++|+++|++.|+|+++
T Consensus 938 G~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~ 986 (1001)
T 3haz_A 938 GNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTIN 986 (1001)
T ss_dssp SEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEE
T ss_pred eeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEEC
Confidence 999999987643 57899999999999 56999999999999999886
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-84 Score=690.92 Aligned_cols=405 Identities=16% Similarity=0.140 Sum_probs=340.1
Q ss_pred EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc-------CCC
Q 009618 73 EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQ-------GKP 145 (530)
Q Consensus 73 ~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~-------Gk~ 145 (530)
-++||.||+++++++.++.+|++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 3799999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCC
Q 009618 146 LK----EAVGEVDYGAKFIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGC 219 (530)
Q Consensus 146 ~~----~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN 219 (530)
+. ++..|+..+++.++||++.+++..+...+.. .++...++.++|+|||++|+||| |...+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 98 4678999999999999988877776654322 13556789999999999999887 87776 89999999999
Q ss_pred EEEeecCCCcHHHHHHHHHHHHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccce
Q 009618 220 TVVVKPSEFTPLTALAAAELALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKK 295 (530)
Q Consensus 220 ~VVlKps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~ 295 (530)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+|++|+||||+.+|+.|++.++ +||
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~p 243 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GIP 243 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--SSC
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CCC
Confidence 999999999999999999999999 9 9999999999 7788999999999999999999999999999887 899
Q ss_pred EEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCcc
Q 009618 296 VSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPL 375 (530)
Q Consensus 296 ~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpl 375 (530)
+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++|| ||+
T Consensus 244 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d-------------------------~p~ 297 (463)
T 2h5g_A 244 VMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR-------------------------TPL 297 (463)
T ss_dssp BCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------SHH
T ss_pred EEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------hHH
Confidence 999999999999999999999999999999999 999999999999999998 343
Q ss_pred CCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC
Q 009618 376 INKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN 455 (530)
Q Consensus 376 i~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~ 455 (530)
+++++++++++|++++.|+... ..++|+ +++|++++||+||||++|++|+|+||||+++|+++
T Consensus 298 --------~~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~ 360 (463)
T 2h5g_A 298 --------FDQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYG 360 (463)
T ss_dssp --------HHHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHC
T ss_pred --------HHHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCC
Confidence 2345788888999998554322 123443 57899999999999999999999999999999999
Q ss_pred CCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCC--CC--ChHHHHHhhheeeEEEEec
Q 009618 456 AGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--RE--GSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 456 ~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G--~~--~g~~~l~~~~~~k~v~~~~ 526 (530)
|||+++|||+|.++++++++++++|+||||++....+.+||||+|+||+| ++ +|++|+++|++.|+|+++.
T Consensus 361 ~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 361 SSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp CSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred CCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 99999999999999999999999999999998777788999999999999 75 9999999999999998763
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-82 Score=672.29 Aligned_cols=395 Identities=19% Similarity=0.183 Sum_probs=328.3
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHH-HHHHH-HHHHHHHHHHH
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV-GEVDY-GAKFIEFYAEE 166 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~-~Ev~~-~~~~l~~~a~~ 166 (530)
.+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..++|+++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999998 8885 89998 99999999998
Q ss_pred HHHHh------CcccCCC-C-CCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHH
Q 009618 167 AKRVY------GEIIPAT-L-PDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAE 238 (530)
Q Consensus 167 ~~~~~------g~~~~~~-~-~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~ 238 (530)
.++.. |...+.. . .+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 87765 4432311 1 2456789999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEec
Q 009618 239 LAL----Q----AGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFD 310 (530)
Q Consensus 239 ~l~----~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~ 310 (530)
++. + +|+|+|++|+|+ ++.++++.|+.||+|++|+||||+.+|+.|++.+ .||+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 8 999999999999 6668899999999999999999999999999876 799999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc---CCCCCCCcccCccCCHHHHHHHHHH
Q 009618 311 DADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETF 387 (530)
Q Consensus 311 dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~~~~ 387 (530)
|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+ +++
T Consensus 249 dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHH
T ss_pred CCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcc
Confidence 99999999999999999999 99999999999999 9999999999999987 87643 344
Q ss_pred -HHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCC
Q 009618 388 -VEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNN 466 (530)
Q Consensus 388 -i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d 466 (530)
+++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|
T Consensus 310 ~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 376 (468)
T 1vlu_A 310 YFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTEN 376 (468)
T ss_dssp HHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSC
T ss_pred cccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCC
Confidence 55554 4677774 3 789997 78899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccceEEEECCCCCCCCCCccc-----CCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 467 LQRTWRVSEALEYGLVGVNEGLISTEVAPFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 467 ~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfG-----G~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
.++++++++++++|+||||++....+.+||| |+|.||+|++ |++|+++|++.|+|+++.
T Consensus 377 ~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 377 KANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp HHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999987777889999 9999999999 999999999999998763
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-81 Score=664.77 Aligned_cols=416 Identities=18% Similarity=0.247 Sum_probs=371.0
Q ss_pred EeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHH
Q 009618 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYA 164 (530)
Q Consensus 86 v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a 164 (530)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+++.+.++.
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~ 85 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYI 85 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhh
Confidence 455678999999999999999999999999999999999999999999999999999999988764 4444444444333
Q ss_pred HHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH----HHH
Q 009618 165 EEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA----ELA 240 (530)
Q Consensus 165 ~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~----~~l 240 (530)
... +..+.. + ...+...+..++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++ +++
T Consensus 86 ~~~-~~~g~~-~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~ 162 (464)
T 3k9d_A 86 KDM-KTIGML-K-EDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAA 162 (464)
T ss_dssp TTC-CCSEEE-E-EETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred hcc-ccccee-c-cCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHH
Confidence 221 111211 1 123567889999999999999999999999999999999999999999999999998765 456
Q ss_pred HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-CCccEEEecCCCHHHHHH
Q 009618 241 LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-GNAPCIVFDDADLNVAVN 319 (530)
Q Consensus 241 ~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G~~~~iV~~dAD~~~a~~ 319 (530)
.++|+|+|++|+|++++.+.++.|++||+|++|+||||+.+ ++.+++++||+ +|+| ||+|+||++|||++.|++
T Consensus 163 ~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~Aa~ 237 (464)
T 3k9d_A 163 EKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRAVK 237 (464)
T ss_dssp HHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHHHH
T ss_pred HHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHHHH
Confidence 89999999999999988899999999999999999999984 55667789999 8998 999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHh-------hccccCCCC-CCCcccCccCCHHHHHHHHHHHHHH
Q 009618 320 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV-------KNLKVGDGF-GEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 320 ~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~-------~~~~~G~p~-~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
.+++++|+|+||.|++++|||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++++.+
T Consensus 238 ~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a 317 (464)
T 3k9d_A 238 HILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLT 317 (464)
T ss_dssp HHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCC
T ss_pred HHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999986 467889998 7899999999999999999999988
Q ss_pred HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH----HHHHcCCCCcEEEEEcCCH
Q 009618 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI----HMANDTNAGLAAYIFTNNL 467 (530)
Q Consensus 392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai----~~~n~~~~gL~a~v~s~d~ 467 (530)
+.+|+++++||.. ++++++++. ||+||||++|++|+|+|||| +++|+++|||+++|||+|.
T Consensus 318 ~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~ 382 (464)
T 3k9d_A 318 VPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDK 382 (464)
T ss_dssp CCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred hcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCH
Confidence 8899999999853 356778765 89999999999999999997 7999999999999999999
Q ss_pred HHHHHHHhhccceEEEECCCCC---------CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 468 QRTWRVSEALEYGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 468 ~~~~~~a~~l~~G~v~vN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
++++++++++++|+||||++.. ..+.+|||| +.+|.|.++|..|+++|++.|+|..+
T Consensus 383 ~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 383 EIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp HHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred HHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 9999999999999999999875 467899998 78999999999999999999999875
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-80 Score=648.52 Aligned_cols=387 Identities=20% Similarity=0.220 Sum_probs=346.0
Q ss_pred HHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHH--------HHHHHHHH
Q 009618 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPL----KEAV--------GEVDYGAK 158 (530)
Q Consensus 91 ~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~--------~Ev~~~~~ 158 (530)
-++++.++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5554 69999999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHH
Q 009618 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (530)
Q Consensus 159 ~l~~~a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l 236 (530)
.++||++++++ .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..+
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 44433321 12456788999999999999886 478899999999999999999999999999999
Q ss_pred HHHHH----HcCCCCccEEeecCC-chhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618 237 AELAL----QAGIPPGVVNVVMGN-APDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311 (530)
Q Consensus 237 ~~~l~----~aGlP~gvv~~v~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d 311 (530)
++++. ++|+|+|++|+|+|. ..+.++.|..||+|++|+||||+.+|+.|++.+ .||+++|||||||+||++|
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~~d 246 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVDES 246 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEeCC
Confidence 99998 789999999999984 456788999999999999999999999999877 6999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHH
Q 009618 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391 (530)
Q Consensus 312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a 391 (530)
||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 247 ADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~---------------------------- 297 (427)
T 1o20_A 247 ADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE---------------------------- 297 (427)
T ss_dssp SCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE----------------------------
T ss_pred CCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe----------------------------
Confidence 9999999999999999999 99999999999999999999999999988652
Q ss_pred HHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHH
Q 009618 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471 (530)
Q Consensus 392 ~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~ 471 (530)
+.||... .+ |+ ||| +++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++
T Consensus 298 -------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~ 363 (427)
T 1o20_A 298 -------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAK 363 (427)
T ss_dssp -------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHH
T ss_pred -------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHH
Confidence 2233221 12 33 885 3467899999999999999999999999999999999999999999999999
Q ss_pred HHHhhccceEEEECCCCCCCCCCcccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009618 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 472 ~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 526 (530)
++++++++|+||||++....+.+||||.|+||+| +++|++|+++|++.|+|+++.
T Consensus 364 ~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 364 KFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999997776778999999999997 468999999999999998874
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-79 Score=647.60 Aligned_cols=389 Identities=20% Similarity=0.203 Sum_probs=335.8
Q ss_pred HHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HHH--------HHHHHHHH
Q 009618 91 GKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK----EAV--------GEVDYGAK 158 (530)
Q Consensus 91 ~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~--------~Ev~~~~~ 158 (530)
.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+.. +++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999853 554 37899999
Q ss_pred HHHHHHHHHHHHhCcccCCC--CCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHH
Q 009618 159 FIEFYAEEAKRVYGEIIPAT--LPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAA 236 (530)
Q Consensus 159 ~l~~~a~~~~~~~g~~~~~~--~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l 236 (530)
.+++|+.+.+. .+...+.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDP-IGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhccc-cCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 99999887643 34433321 23567889999999999999998 8 58899999999999999999999999999999
Q ss_pred HHHH----HHcCCCCccEEeecCCch-hHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecC
Q 009618 237 AELA----LQAGIPPGVVNVVMGNAP-DIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDD 311 (530)
Q Consensus 237 ~~~l----~~aGlP~gvv~~v~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~d 311 (530)
++++ .++|+|+|++|+|+|.+. +.++.|..||+|++|+||||+.+|+.+++.+ +||+++|||||||+||++|
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~d 258 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDDR 258 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECTT
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECCC
Confidence 9997 799999999999998655 5788888999999999999999999998876 7999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc---CCCCCCCcccCccCCHHHHHHHHHHH
Q 009618 312 ADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV---GDGFGEGVVQGPLINKAALEKVETFV 388 (530)
Q Consensus 312 AD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~---G~p~~~~~~~Gpli~~~~~~~~~~~i 388 (530)
||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|+++++++++ |+|. ..+++
T Consensus 259 ADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~~~i 320 (444)
T 4ghk_A 259 ASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------ARAVL 320 (444)
T ss_dssp CCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HHHHH
T ss_pred CCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HHHHH
Confidence 9999999999999999999 9999999999999999999999999999988 7653 13455
Q ss_pred HHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHH
Q 009618 389 EDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQ 468 (530)
Q Consensus 389 ~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~ 468 (530)
+++. + | ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 321 ~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 377 (444)
T 4ghk_A 321 EAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHD 377 (444)
T ss_dssp HHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHH
T ss_pred Hhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHH
Confidence 5431 1 1 12 3467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCC----CCChHHHHHhhheeeEEEEec
Q 009618 469 RTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG----REGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 469 ~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G----~~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++++++++++|+|+||++....+.+||||.|+||+| +++|++|+++|++.|+|+++.
T Consensus 378 ~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 378 RAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp HHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred HHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999998877788999999999998 679999999999999998863
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-77 Score=632.45 Aligned_cols=414 Identities=18% Similarity=0.223 Sum_probs=347.8
Q ss_pred EeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHH-HHH
Q 009618 86 VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFI-EFY 163 (530)
Q Consensus 86 v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~~~~l-~~~ 163 (530)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. |+..+++.+ +||
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999986 777777777 455
Q ss_pred HHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHH--
Q 009618 164 AEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELAL-- 241 (530)
Q Consensus 164 a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~-- 241 (530)
+. .+..+. ++. .++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.
T Consensus 81 ~~--~~~~g~-~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LEE-DDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-ccC-CCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 43 122222 111 234567889999999999999999999999999999999999999999999999998888765
Q ss_pred --HcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHH
Q 009618 242 --QAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVN 319 (530)
Q Consensus 242 --~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~ 319 (530)
++|+|+|++|+|++++.+.+++|+.||+|++|+||||+.++ +.+++++||+++|+|||+|+||++|||++.|++
T Consensus 157 ~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~Aa~ 232 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRAVA 232 (452)
T ss_dssp HHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHHHH
T ss_pred HHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHHHH
Confidence 79999999999999888999999999999999999999864 456678999999999999999999999999999
Q ss_pred HHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEe
Q 009618 320 GALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVL 399 (530)
Q Consensus 320 ~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl 399 (530)
.+++|+|+|+||.|++++|||||+++||+|+++|+++ .||++++++.+++.++++++...|+++
T Consensus 233 ~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v- 296 (452)
T 3my7_A 233 SVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI- 296 (452)
T ss_dssp HHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-
T ss_pred HHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-
Confidence 9999999999999999999999999999999999875 289999999999999998766677776
Q ss_pred eCCcccC---CCCceEeceE-------ecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC----CCcEEEEEcC
Q 009618 400 LGGRRHS---LGMTFYEPTV-------LSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTN----AGLAAYIFTN 465 (530)
Q Consensus 400 ~gg~~~~---~~~~~~~Ptv-------l~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~----~gL~a~v~s~ 465 (530)
+||.... ..|+|++||+ +.++++++++.+ |+||||++|++|+|+||||+++|++. |||+++|||+
T Consensus 297 ~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~ 375 (452)
T 3my7_A 297 VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTN 375 (452)
T ss_dssp TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESC
T ss_pred ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcC
Confidence 4775421 2478999998 778999999875 89999999999999999999999985 9999999999
Q ss_pred CHHHHHH---HHhhccceEEEECCCCCCC-----------CCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 466 NLQRTWR---VSEALEYGLVGVNEGLIST-----------EVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 466 d~~~~~~---~a~~l~~G~v~vN~~~~~~-----------~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|.+++++ +++++++|+|+||++..+. +.+++ |++..|-+...+.-+.++|++.|+|..+
T Consensus 376 d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~ 448 (452)
T 3my7_A 376 QDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKR 448 (452)
T ss_dssp TTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECC
T ss_pred CHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEee
Confidence 9887777 9999999999999965420 11111 3444444444566788999999998765
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.087 Score=53.45 Aligned_cols=284 Identities=17% Similarity=0.174 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC---CcchHHHHHHHhhHhhcCCE-EEeecCC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCT-VVVKPSE 227 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~-VVlKps~ 227 (530)
.++.+.+.++.|.... ..........+|.....++.|+--|++-.|. .||. +.+....||-.+|+. +|+..++
T Consensus 93 ai~~A~~~I~~fh~~Q--~~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypS-svLM~aiPAkVAGV~~Iv~~tPp 169 (423)
T 4gic_A 93 ALREAAERIRAYAERQ--KLDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPS-SVLMNAVPAKVAGVPELIMAVPA 169 (423)
T ss_dssp HHHHHHHHHHHHHHHH--CCCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHH-HHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHHHHHhc--ccCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhh-HHHHhhccHHHhCCCeEEEecCC
Confidence 3444555555554322 1111111234577778889999999999994 3554 344567899999996 3333332
Q ss_pred CcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-C
Q 009618 228 FTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG-G 302 (530)
Q Consensus 228 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg-G 302 (530)
..-...-.+.-..+.+|+.+ +..-.|.+.-.+|.- -|.||+|+=.|..=|...=. ... ..+-..+- |
T Consensus 170 ~~G~i~p~iL~AA~l~Gv~e----Iy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr-~v~---g~VgIDm~AG 241 (423)
T 4gic_A 170 PRGELNALVLAAAYISGVDR----VFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKK-LVF---GQVGIDMVAG 241 (423)
T ss_dssp GGGCCCHHHHHHHHHHTCCE----EECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHH-HHB---TTBEECCCCC
T ss_pred CCCCccHHHHHHHHhcCCcE----EEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHHHH-Hhc---CCcCcccccc
Confidence 21112223334456677763 333225554455554 57899999888876643211 111 12333332 5
Q ss_pred CccEEEe--cCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCCH
Q 009618 303 NAPCIVF--DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 378 (530)
Q Consensus 303 ~~~~iV~--~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~ 378 (530)
.+=++|. ++||.++.+.+++..+=.... .+.++|.. .+.++..+.+.+.++.+. ..
T Consensus 242 PSEilViAD~~a~p~~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l~---------------r~ 301 (423)
T 4gic_A 242 PSEILVISDGRTDPDWIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGME---------------RA 301 (423)
T ss_dssp CCEEEEEECSCSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGCT---------------TH
T ss_pred cceEEEEeCCCCCHHHHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhCc---------------cH
Confidence 5544444 358999999999887765432 33455644 445555555555555441 11
Q ss_pred HHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCc
Q 009618 379 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGL 458 (530)
Q Consensus 379 ~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL 458 (530)
+...+-++. +| .|+.++|.+|+++++|..-.=
T Consensus 302 ---~i~~~sl~~-----------------------------------------~g---~ii~v~~~~ea~~~~N~~APE- 333 (423)
T 4gic_A 302 ---EVIRTSLER-----------------------------------------RG---GMILVDDLEQAAAVANRIAPE- 333 (423)
T ss_dssp ---HHHHHHHHH-----------------------------------------HC---EEEECSSHHHHHHHHHHHCCS-
T ss_pred ---HHHHHHHhc-----------------------------------------Cc---eEEEEeehHHHHHHHHhhChH-
Confidence 111111110 11 245679999999999995332
Q ss_pred EEEEEcCCHHHHHHHHhhcc-ceEEEECCCCCC---------CCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 459 AAYIFTNNLQRTWRVSEALE-YGLVGVNEGLIS---------TEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 459 ~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~~---------~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
-.-|.++|.. .+..+++ +|.|++..++.. +..+| .+|..|..+.-+++.|+..-++
T Consensus 334 HLel~~~~~~---~~l~~i~nAGaIFlG~~tp~~~GDY~aG~NHvLP-----T~G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 334 HLELSVESPE---VLVESIRNAGAIFMGRYTAEALGDYCAGPNHVLP-----TSGTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp EEEEESSCHH---HHGGGCCCCSEEEEC----------------CCC-----CTTGGGTCCCCCGGGGEEEEEE
T ss_pred HhhhhhCCHH---HHHhhCcEeceeecCCCCchhhhhcCcCCCccCC-----CCCcccccCCCCHHHeeeeeeE
Confidence 4567788875 4777776 999999875541 12445 4556666666678888765443
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.12 Score=52.46 Aligned_cols=282 Identities=20% Similarity=0.232 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCC---CcchHHHHHHHhhHhhcCCEEEe--ecC
Q 009618 152 EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW---NFPLAMITRKVGPALACGCTVVV--KPS 226 (530)
Q Consensus 152 Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVl--Kps 226 (530)
.++.+.+.++.|...... ........+|.....++.|+--|++-.|. -||. +.+....||-.+|+.=|+ -|+
T Consensus 87 ai~~A~~nI~~fH~~Q~~--~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypS-svLM~aiPAkVAGV~~Iv~~tPp 163 (434)
T 1kae_A 87 AMAVAVKNIETFHTAQKL--PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFS-TVLMLATPASIAGCKKVVLCSPP 163 (434)
T ss_dssp HHHHHHHHHHHHHHTTCC--CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTH-HHHHHHHHHHHHTCSEEEEEECS
T ss_pred HHHHHHHHHHHHHHHhcC--CCceEEecCCcEEEEEEeehheEEEEecCCCCCchh-HHHHhhccHhhcCCCeEEEECCC
Confidence 455566666665532211 11011122366677788999999999996 4554 444567899999986544 333
Q ss_pred CCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEeecC-
Q 009618 227 EFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELG- 301 (530)
Q Consensus 227 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelg- 301 (530)
.-.|. +.-..+.+|+.+ +--+ | |.+.-.+|.- -|.||+|+=.|..=|...=..-.. ....+-+.+-
T Consensus 164 ~i~p~----iL~AA~l~Gv~e--Iy~v-G-GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~-~~G~VgIDm~A 234 (434)
T 1kae_A 164 PIADE----ILYAAQLCGVQD--VFNV-G-GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPA 234 (434)
T ss_dssp SCCHH----HHHHHHHTTCCE--EEEC-C-HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHH-CTTSCEESCCC
T ss_pred CCCHH----HHHHHHHcCCCE--Eeec-c-cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHh-hcCccccCCCC
Confidence 23333 334457777764 2222 4 5554445443 478999998887665322111100 0122333332
Q ss_pred CCccEEEe--cCCCHHHHHHHHHHHHhhccCCccccCCeEEEeh--hhHHHHHHHHHHHhhccccCCCCCCCcccCccCC
Q 009618 302 GNAPCIVF--DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQE--GIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLIN 377 (530)
Q Consensus 302 G~~~~iV~--~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~--~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~ 377 (530)
|.+=++|. ++||.++.+.+++..+=... ..+.++|.. .+.++..+.+.+.+..+. .
T Consensus 235 GPSEilViAD~tAnp~~vAaDLLsQAEHd~-----~a~aiLvT~s~~la~~V~~ev~~ql~~lp---------------r 294 (434)
T 1kae_A 235 GPSEVLVIADSGATPDFVASDLLSQAEHGP-----DSQVILLTPAADMARRVAEAVERQLAELP---------------R 294 (434)
T ss_dssp CCCEEEEEECTTSCHHHHHHHHHHHHTTCT-----TCEEEEEESCHHHHHHHHHHHHHHHTTCT---------------T
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHhccCC-----CCcEEEEECCHHHHHHHHHHHHHHHHhCC---------------h
Confidence 55554444 45899999999887775542 234455543 444555555555554431 1
Q ss_pred HHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCC
Q 009618 378 KAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAG 457 (530)
Q Consensus 378 ~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~g 457 (530)
. +.++.++ ..- .|+.++|.||+++++|..-.=
T Consensus 295 ---~----~ia~~sl----------------------------------------~~~-~ii~v~~l~ea~~~~N~~APE 326 (434)
T 1kae_A 295 ---A----ETARQAL----------------------------------------NAS-RLIVTKDLAQCVEISNQYGPE 326 (434)
T ss_dssp ---H----HHHHHHH----------------------------------------TTC-EEEECSSHHHHHHHHHHHCCS
T ss_pred ---H----HHHHHHH----------------------------------------HcC-eEEEECCHHHHHHHHHHhhhH
Confidence 1 1112211 112 356779999999999985333
Q ss_pred cEEEEEcCCHHHHHHHHhhcc-ceEEEECCCCC---------CCCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 458 LAAYIFTNNLQRTWRVSEALE-YGLVGVNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 458 L~a~v~s~d~~~~~~~a~~l~-~G~v~vN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
-.-|.++|.. .+..+++ +|.|++..++. .+..+|= +|+.|..|.-+++.|++.-++
T Consensus 327 -HLel~~~dp~---~~l~~I~nAGaIFlG~~tpe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 327 -HLIIQTRNAR---ELVDSITSAGSVFLGDWSPESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp -EEEEESTTHH---HHGGGCCSCSEEEESTTCCHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEE
T ss_pred -hhhhhhcCHH---HHHhhcCcccchhcCCCCchhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeE
Confidence 4567888874 5677776 99999998765 1335664 455666666688888876554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 530 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-172 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-171 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-160 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-145 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-121 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-117 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 1e-105 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-103 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-59 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-58 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 8e-26 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 492 bits (1268), Expect = e-172
Identities = 189/483 (39%), Positives = 268/483 (55%), Gaps = 6/483 (1%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA---FD 103
L + T+ I +W + GK V NPAT E + V ++ A+ +A F
Sbjct: 6 LTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQ 65
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEF 162
+ W + A+ER + L K DL+ + L + + GK + ++ K + +
Sbjct: 66 IGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRY 125
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
A A ++ G IP + + +PVGV G I PWNFPL M K+GPAL+CG TVV
Sbjct: 126 CAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVV 184
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
VKP+E TPLTAL L +AG PPGVVN+V G P G A+ + V K+ FTGST VG
Sbjct: 185 VKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 244
Query: 283 KKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
K + A +K+VSLELGG +PCIVF DADL+ AV A F + GQ C+ A+R+ V
Sbjct: 245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFV 304
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
+E IY++F + K +G+ GV QGP I+K EK+ +E +GAK+ G
Sbjct: 305 EESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECG 364
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G F +PTV S+V +M +++EE+FGPV ++ FK+ ++ I AN+T GL+A
Sbjct: 365 GGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAG 424
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521
IFTN++ + VS AL+ G V VN + + PFGG K SG GRE +YG E+ E+K
Sbjct: 425 IFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 484
Query: 522 VCL 524
V +
Sbjct: 485 VTI 487
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 490 bits (1263), Expect = e-171
Identities = 184/483 (38%), Positives = 270/483 (55%), Gaps = 6/483 (1%)
Query: 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSA---FD 103
+ + Q I +W DA KT NP+TGEVI V+ ++ A+ +A F
Sbjct: 6 NQQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQ 65
Query: 104 AFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEF 162
+ W ++ A+ R + L + DL+ + L L TL+ GKP + ++D K + +
Sbjct: 66 LGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRY 125
Query: 163 YAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVV 222
YA A + +G+ IP D + +PVGV G I PWNFPL M K+GPALA G VV
Sbjct: 126 YAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVV 184
Query: 223 VKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282
+K +E TPLTAL A L +AG PPGVVN+V G P G A+ + V K+ FTGST +G
Sbjct: 185 MKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 244
Query: 283 KKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLV 341
+ + A +K+V+LELGG +P I+ DAD++ AV A A F N GQ +R V
Sbjct: 245 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFV 304
Query: 342 QEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLG 401
QE IY++F + K+ VG+ F QGP +++ +K+ ++ +GAK+L G
Sbjct: 305 QEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCG 364
Query: 402 GRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAY 461
G + F +PTV +V+ M +++EE+FGPV +L FKT EE + AN++ GLAA
Sbjct: 365 GGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAA 424
Query: 462 IFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521
+FT +L + +S+AL+ G V VN + +PFGG K SG GRE +YG+ + E+K
Sbjct: 425 VFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKT 484
Query: 522 VCL 524
V +
Sbjct: 485 VTV 487
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 463 bits (1192), Expect = e-160
Identities = 185/479 (38%), Positives = 261/479 (54%), Gaps = 11/479 (2%)
Query: 59 IGGKWIDAYDGKTLE-VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
GG+ I + DG T E V PATG V+ + G +E A+ SA A+ WSK+ ERS
Sbjct: 24 WGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS 83
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPA 177
+ + + ++ ++ + +L + GK + EA ++D + IE+YA A + G+ I
Sbjct: 84 RVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQL 143
Query: 178 TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237
+ ++P+GV I WN+P + K PALACG VV KPS TP+T + A
Sbjct: 144 P-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILA 202
Query: 238 ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVS 297
E+ +AG+P G+VNVV G + G L P V K++FTGS GKK+M +A TVK V+
Sbjct: 203 EIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTVKHVT 261
Query: 298 LELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAV 357
LELGG +P ++F D +L AV GAL A F GQ C RV VQ I +F + K
Sbjct: 262 LELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRT 321
Query: 358 KNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM------TF 411
K + VGD G LI+K L+KV FV A +GA+VL GG + F
Sbjct: 322 KAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYF 381
Query: 412 YEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTW 471
P VL N + +M +EE+FGPV +L F TEEE + AN+T GLA+ +FT ++ R
Sbjct: 382 MSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAH 441
Query: 472 RVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDMN 528
RV+ LE G +N IS PFGG K SG GRE + +D + ++K V +GD++
Sbjct: 442 RVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEMGDVD 500
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 423 bits (1087), Expect = e-145
Identities = 169/473 (35%), Positives = 261/473 (55%), Gaps = 4/473 (0%)
Query: 53 LRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLT 112
++ + LI G+ + +G+ V+NPATG+V+ ++ ++ A+ +A AF W + T
Sbjct: 1 MQHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTT 59
Query: 113 AAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEV-DYGAKFIEFYAEEAKRVY 171
R++ L K D++ + + +L + GKPL A + F+A A+ +
Sbjct: 60 PKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLN 119
Query: 172 GEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPL 231
G L + + P+GV +I PWN+PL M K+ PALA G VV+KPSE TPL
Sbjct: 120 GLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPL 179
Query: 232 TALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAG 291
TAL AELA + P GVVN++ G +GD L P+VR ++ TGS A G+ +++ A
Sbjct: 180 TALKLAELA-KDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238
Query: 292 TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFAD 351
++K+ +ELGG AP IVFDDAD+ V G + N+GQ C A R+ Q+GIY+ +
Sbjct: 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 298
Query: 352 AFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGA-KVLLGGRRHSLGMT 410
AV LK G E GPL + A LE+V VE+A + G KV+ GG +
Sbjct: 299 KLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY 358
Query: 411 FYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRT 470
+Y PT+L+ + + ++EVFGPV + F EE+ ++ AND+ GLA+ ++T ++ R
Sbjct: 359 YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRA 418
Query: 471 WRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
RVS L+YG VN + P GG K SG G++ S YG++++ +++V
Sbjct: 419 HRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 363 bits (933), Expect = e-121
Identities = 156/472 (33%), Positives = 245/472 (51%), Gaps = 14/472 (2%)
Query: 58 LIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERS 117
+ G+W + ++++ PA+G + +V M +E +SA A +W L+ ER+
Sbjct: 7 YVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA 64
Query: 118 KGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEI--- 174
L K D+LM KE++G +++ E K K AV EV A+ I + AEE R+ GE+
Sbjct: 65 AYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG 124
Query: 175 --IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLT 232
A + V ++PVG+ AI+P+N+P+ + K+ PAL G + KP ++
Sbjct: 125 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 184
Query: 233 ALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292
L AE +AG+P GV N + G +IGD ++ V I FTGST +G+++ A
Sbjct: 185 GLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG-- 242
Query: 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADA 352
++ + LELGG IV +DADL + +A F SGQ C RVLV E + ++ +
Sbjct: 243 MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302
Query: 353 FSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFY 412
+ V L +G+ + PLI+ + + VE + DA KGA L +R
Sbjct: 303 IREKVLALTIGNPE-DDADITPLIDTKSADYVEGLINDANDKGATALTEIKREG---NLI 358
Query: 413 EPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWR 472
P + V ++M ++ EE FGPV P++ + EEAI ++N + GL A IFTN+ R +
Sbjct: 359 CPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFG 418
Query: 473 VSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC 523
++E LE G V +N T+ PF G K+SG G +G KY ++ +K V
Sbjct: 419 IAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 353 bits (907), Expect = e-117
Identities = 153/510 (30%), Positives = 241/510 (47%), Gaps = 18/510 (3%)
Query: 25 MQSYTPAFSRQMSVGMKSVTDRLRDSGLLRTQGLIGGKWIDAYDGKTLEVHNP-ATGEVI 83
++++ +R+ M+ R+R+ IGG+W+D + + NP A EV+
Sbjct: 11 IETFQTEEARR---AMREALRRVREEFGRHYPLYIGGEWVDT--KERMVSLNPSAPSEVV 65
Query: 84 ANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQG 143
+ G E + A+ +A+ AF +W +RS+ L K L+ K EL + E G
Sbjct: 66 GTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVG 125
Query: 144 KPLKEAVGEVDYGAKFIEFYAEEAKRVYG-EIIPATLPDRRLFVLKQPVGVAGAITPWNF 202
K EA +V FIE+YA A R + P P+G I PWNF
Sbjct: 126 KNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNF 185
Query: 203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGD 262
P+A+ T + +A G TV+ KP+E + E+ +AG PPGVVN + G ++G
Sbjct: 186 PVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGA 245
Query: 263 ALLTSPQVRKITFTGSTAVGKKLMAGA------AGTVKKVSLELGGNAPCIVFDDADLNV 316
L+ P++R I FTGS VG K+ A K+ +E GG IV + AD ++
Sbjct: 246 YLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDL 305
Query: 317 AVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLI 376
A G + + + GQ C A+R+++ +G YE + K + L VG E GP++
Sbjct: 306 AAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPA-EENPDLGPVV 364
Query: 377 NKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVA 436
+ KV +++E ++G VL GG+R F PTV + V + +++EE+FGPV
Sbjct: 365 SAEQERKVLSYIEIGKNEGQLVL-GGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVL 423
Query: 437 PLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--A 494
++ K EA+ +ANDT GL +++ + G + N + V
Sbjct: 424 SVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQ 483
Query: 495 PFGGVKQSGLGRE-GSKYGMDEFLEIKYVC 523
PFGG K SG + G+ + FLE+K V
Sbjct: 484 PFGGFKLSGTNAKTGALDYLRLFLEMKAVA 513
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 323 bits (827), Expect = e-105
Identities = 143/482 (29%), Positives = 233/482 (48%), Gaps = 12/482 (2%)
Query: 50 SGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SW 108
G+ + G+W + G+ +EV +P IA V +E + + F S
Sbjct: 12 GGVPVYPSYLAGEWGGS--GQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSA 69
Query: 109 SKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAK 168
+ ER LRK D++ + + +++ + GKP AVGEV + + K
Sbjct: 70 RDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLK 129
Query: 169 RVYGEIIP----ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVK 224
++ G+ IP + V ++P+GV AITP+N+PL K+ + G VVVK
Sbjct: 130 KIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVK 189
Query: 225 PSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKK 284
PS PL A A + L AG P ++ + ++ +V ++FTGST VG++
Sbjct: 190 PSISDPLPAAMAVKALLDAG-FPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGER 248
Query: 285 LMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEG 344
++ VK+ +ELGG P IV +DADL++A + + +GQ C VL +
Sbjct: 249 VVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERP 306
Query: 345 IYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404
+Y K + +K + +L+VGD V GPLI+ +A++++ +EDAV KG +VL GGRR
Sbjct: 307 VYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR 366
Query: 405 HSLGMTFYEP-TVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIF 463
++ +M++ + EVF PVA + K ++AI +AN GL A +F
Sbjct: 367 LGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVF 426
Query: 464 TNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522
++ + R LE G + +N+ PFGG K+SG+ REG Y ++ K +
Sbjct: 427 GRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 486
Query: 523 CL 524
Sbjct: 487 VF 488
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 316 bits (810), Expect = e-103
Identities = 116/435 (26%), Positives = 195/435 (44%), Gaps = 16/435 (3%)
Query: 96 DAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVD 154
D + A +AFNS + R + L ++ + + + + + GK + EV
Sbjct: 4 DTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVA 63
Query: 155 YGAKFIEFYAEEAKRVYGEII---PATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211
+ + ++ +E + L++ +P+GV I WN+P + + +
Sbjct: 64 HVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPM 123
Query: 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVR 271
A+A G V++KPSE + A A ++ L +
Sbjct: 124 VGAVAAGNAVILKPSEVSGHMADLLAT---LIPQYMDQNLYLVVKGGVPETTELLKERFD 180
Query: 272 KITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQ 331
I +TGSTAVGK +MA AA + V+LELGG +PC V D DL+VA KF NSGQ
Sbjct: 181 HIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQ 240
Query: 332 TCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDA 391
TCV + +L I + + K++K+ G+ + G +IN ++V+ +++
Sbjct: 241 TCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN- 298
Query: 392 VSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451
+ + G + PT+L +V + V +EE+FGPV P++C ++ EEAI
Sbjct: 299 -----QKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFI 353
Query: 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEV--APFGGVKQSGLGREGS 509
N LA Y+F+NN + ++ G V N+ ++ V PFGGV SG+G
Sbjct: 354 NQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAYHG 413
Query: 510 KYGMDEFLEIKYVCL 524
K + F + +
Sbjct: 414 KKSFETFSHRRSCLV 428
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 203 bits (516), Expect = 1e-59
Identities = 86/479 (17%), Positives = 158/479 (32%), Gaps = 40/479 (8%)
Query: 69 GKTLEVHNPATGEVIAN-VSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLL 127
N TGE + E A ++A + +L ++R+ LR L
Sbjct: 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASEL 61
Query: 128 MAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP--------ATL 179
A +++ LE P GE+ A + +A+ A L
Sbjct: 62 EARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPL 121
Query: 180 PDRRLFVLKQPVGVAGAITPWNFPL--AMITRKVGPALACGCTVVVKPSEFTPLT----A 233
P + + +G NFPL + ALA GC V+VK P T A
Sbjct: 122 PKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVA 181
Query: 234 LAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293
+ Q +P + ++ GN +G AL++ P+++ + FTGS G+ L A
Sbjct: 182 ECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241
Query: 294 KKVSL--ELGGNAPCIVFDDADLNVA--VNGALAAKFRNSGQTCVCANRVLVQEGIYEKF 349
+ + ELG P +F A A + +A+ GQ C V +
Sbjct: 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQA 301
Query: 350 ADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409
++++ + ++ ++ + ++ S + S +
Sbjct: 302 FIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFS---------QAESPCV 352
Query: 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTN--NL 467
S + EE+FGP + ++ + + + ++ L A I +
Sbjct: 353 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDY 412
Query: 468 QRTWRVSEALEY--GLVGVNEGLISTEV-------APFGGVKQSGLGREGSKYGMDEFL 517
+ ++ LE G + N EV P+ S + +L
Sbjct: 413 PQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIHRWL 470
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 197 bits (501), Expect = 2e-58
Identities = 67/452 (14%), Positives = 129/452 (28%), Gaps = 62/452 (13%)
Query: 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE 152
E + +A++ T E++K ++K + L ++E+ + ++ K + V E
Sbjct: 2 ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKE 61
Query: 153 ------------VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPW 200
+D K E V I D + +
Sbjct: 62 SLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIG-PIGIIY 120
Query: 201 NFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAP-D 259
+ AL G T++++ + A +A + +
Sbjct: 121 ESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT 180
Query: 260 IGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF-DDADLNVAV 318
+L ++R+ G L++ LE G I + ADL AV
Sbjct: 181 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAV 240
Query: 319 NGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINK 378
+ AK + G ++ ++ I ++F + ++ V E +
Sbjct: 241 PVIINAKTQRPGTCNAAEKLLVHEK-IAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVV 299
Query: 379 AALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPL 438
A E E + +
Sbjct: 300 PATEDDW------------------------------------------PTEYLDLIIAI 317
Query: 439 LCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGG 498
K +EAI + G + I T N + ++ V VN T+ FG
Sbjct: 318 KVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGF 377
Query: 499 VKQSGLGREGS----KYGMDEFLEIKYVCLGD 526
+ G+ + G+ E K+V LG+
Sbjct: 378 GAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 107 bits (268), Expect = 8e-26
Identities = 77/462 (16%), Positives = 136/462 (29%), Gaps = 62/462 (13%)
Query: 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQ--LITLEQGKPLKEA 149
++ +A A N ++ RS L K +D L A+ + + I L K A
Sbjct: 3 SSSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLA 62
Query: 150 VGEVD----YGAKFIEFYAEEAKRVY------GEIIPATLPDRRLFVLKQPVGVAGAITP 199
+ + E + K V G++ A D L + + V +
Sbjct: 63 DSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI 122
Query: 200 WNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL-------ALQAGIPPGVVNV 252
+ +I ++ G ++K + + T A++ P
Sbjct: 123 FESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQ 182
Query: 253 VMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDA 312
++ D+ D L + + GS A+ +K+ V G + +DA
Sbjct: 183 LIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTKIPVLG---HADGICSIYLDEDA 239
Query: 313 DLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372
DL A +L AK + I KF+ + G
Sbjct: 240 DLIKAKRISLDAKTNYPAGCNAMETLL-----INPKFSKWWEVLENLTLEGG-------- 286
Query: 373 GPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVF 432
V +K K + + LG + E +E
Sbjct: 287 ---------------VTIHATKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFL 331
Query: 433 GPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTE 492
+ E AI N ++ I T N + + ++ V N ST
Sbjct: 332 SLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNA---STR 388
Query: 493 VA---PFG-----GVKQSGLGREGSKYGMDEFLEIKYVCLGD 526
A +G G+ S + G G+D + +Y GD
Sbjct: 389 FADGFRYGFGAEVGISTSKIHARG-PVGLDGLVSYQYQIRGD 429
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.57 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=4.8e-107 Score=870.93 Aligned_cols=479 Identities=40% Similarity=0.635 Sum_probs=456.1
Q ss_pred hhccCCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHH
Q 009618 47 LRDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKW 123 (530)
Q Consensus 47 ~~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~ 123 (530)
+.+..+...+.||||+|+.+.++++++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|+++|+++
T Consensus 6 ~~~~~~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~ki 85 (494)
T d1bxsa_ 6 LTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKL 85 (494)
T ss_dssp CSSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHH
T ss_pred CCCCCcCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHH
Confidence 333444446789999999988899999999999999999999999999999999999996 69999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCc
Q 009618 124 YDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNF 202 (530)
Q Consensus 124 a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~ 202 (530)
+++|++++++|++++++|+|||..++. .|+..++++++|++...++..+...+.. .+...++.++|+|||++|+||||
T Consensus 86 a~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~ 164 (494)
T d1bxsa_ 86 ADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNF 164 (494)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCS-SSEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCC-CCceeEEEEccEEEEEEEeCccc
Confidence 999999999999999999999999865 6899999999999999988777766543 36778899999999999999999
Q ss_pred chHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHH
Q 009618 203 PLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVG 282 (530)
Q Consensus 203 P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 282 (530)
|+..+++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|++||+|++|.||||+.+|
T Consensus 165 P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~fTGS~~~g 244 (494)
T d1bxsa_ 165 PLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 244 (494)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHH
T ss_pred hhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEecCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHhc-ccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccc
Q 009618 283 KKLMAGAAG-TVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLK 361 (530)
Q Consensus 283 ~~i~~~~a~-~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~ 361 (530)
+.|++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 245 ~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~~~ 324 (494)
T d1bxsa_ 245 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYV 324 (494)
T ss_dssp HHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhhee
Confidence 999998885 6899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEe
Q 009618 362 VGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCF 441 (530)
Q Consensus 362 ~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~ 441 (530)
+|+|.++++++||++++++++++++++++++++||++++||......|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 325 ~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~~ 404 (494)
T d1bxsa_ 325 LGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKF 404 (494)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred eeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccCceEEEEEE
Confidence 99999999999999999999999999999999999999999876556899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeE
Q 009618 442 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKY 521 (530)
Q Consensus 442 ~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~ 521 (530)
+|+||||+++|+++|||++||||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 405 ~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~ 484 (494)
T d1bxsa_ 405 KSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKT 484 (494)
T ss_dssp CCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999988878899999999999999999999999999999
Q ss_pred EEEec
Q 009618 522 VCLGD 526 (530)
Q Consensus 522 v~~~~ 526 (530)
|+++.
T Consensus 485 i~~~~ 489 (494)
T d1bxsa_ 485 VTIKI 489 (494)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99874
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=3.2e-106 Score=864.07 Aligned_cols=477 Identities=39% Similarity=0.615 Sum_probs=455.9
Q ss_pred hccCCccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH---hhhcCCHHHHHHHHHHHH
Q 009618 48 RDSGLLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN---SWSKLTAAERSKGLRKWY 124 (530)
Q Consensus 48 ~~~~~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~---~w~~~~~~~R~~iL~~~a 124 (530)
..+.+...+.||||+|+.+.++++++++||.||+++++++.++.+|+++|+++|++||+ .|+.+++.+|+++|++++
T Consensus 7 ~~p~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a 86 (494)
T d1o04a_ 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLA 86 (494)
T ss_dssp SSCCCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHH
T ss_pred CCCccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHH
Confidence 34556677899999999988899999999999999999999999999999999999985 699999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcc
Q 009618 125 DLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFP 203 (530)
Q Consensus 125 ~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P 203 (530)
+.|++++++|++++++|+|||..++. .|+..++..++||+..+.+..+...+.. .+...+++++|+|||++|+|||||
T Consensus 87 ~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P 165 (494)
T d1o04a_ 87 DLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFP 165 (494)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCS-SSEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccC-CCceeEEEEecccEEEEECCcccH
Confidence 99999999999999999999999985 6999999999999999988877766543 356788899999999999999999
Q ss_pred hHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHH
Q 009618 204 LAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGK 283 (530)
Q Consensus 204 ~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~ 283 (530)
+...++++++||++||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|+.|.||||+++|+
T Consensus 166 ~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~fTGS~~~g~ 245 (494)
T d1o04a_ 166 LLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGR 245 (494)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHh-cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhcccc
Q 009618 284 KLMAGAA-GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKV 362 (530)
Q Consensus 284 ~i~~~~a-~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~ 362 (530)
.|++.++ +++||+++|||||||+||++|||+|.|++.+++++|.++||+|++++|+|||++++|+|+++|.++++++++
T Consensus 246 ~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~ 325 (494)
T d1o04a_ 246 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVV 325 (494)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCB
T ss_pred HHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhheee
Confidence 9998876 689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeC
Q 009618 363 GDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFK 442 (530)
Q Consensus 363 G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~ 442 (530)
|+|.++++++||++++.+++++.+++++++++|+++++||......|+|++|||+.++++++++++||+||||++|++|+
T Consensus 326 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~~~~ 405 (494)
T d1o04a_ 326 GNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405 (494)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEEC
T ss_pred cCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccCceEEEEEeC
Confidence 99999999999999999999999999999999999999998765567999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 443 TEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 443 ~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|.+||++||+.|+|
T Consensus 406 ~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k~v 485 (494)
T d1o04a_ 406 TIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485 (494)
T ss_dssp CHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEE
T ss_pred CHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCeEEE
Confidence 99999999999999999999999999999999999999999999887778899999999999999999999999999999
Q ss_pred EEe
Q 009618 523 CLG 525 (530)
Q Consensus 523 ~~~ 525 (530)
+++
T Consensus 486 ~~~ 488 (494)
T d1o04a_ 486 TVK 488 (494)
T ss_dssp EEE
T ss_pred EEe
Confidence 885
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=5e-105 Score=855.54 Aligned_cols=470 Identities=39% Similarity=0.619 Sum_probs=450.7
Q ss_pred ccceecCEeeeCCCCCeE-EeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 55 TQGLIGGKWIDAYDGKTL-EVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 55 ~~~~i~G~~~~~~~~~~~-~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
..+||||+|+.+.+++++ +++||+||+++++++.++.+|+++|+++|++||+.|+.++..+|+++|++++++|++++++
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ee 99 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDN 99 (503)
T ss_dssp CCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 457999999998777776 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhh
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGP 213 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 213 (530)
|++++++|+|||+.++..|+..+++.++|++....+..+...+.. .+...++.++|+|||++|+|||||+...++++++
T Consensus 100 la~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~~~ 178 (503)
T d1a4sa_ 100 IAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP 178 (503)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccccC-CCcccccccccceeeecccCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999887766554332 3667899999999999999999999999999999
Q ss_pred HhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 214 ALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 214 ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|++|+||||+++|+.|++.+++++
T Consensus 179 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 257 (503)
T d1a4sa_ 179 ALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV 257 (503)
T ss_dssp HHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHTTT
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999999999999999999 6789999999999999999999999999999999999
Q ss_pred ceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccC
Q 009618 294 KKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQG 373 (530)
Q Consensus 294 ~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~G 373 (530)
||+++|||||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++|++++.+.++++++|+|.++.+++|
T Consensus 258 ~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~g 337 (503)
T d1a4sa_ 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMG 337 (503)
T ss_dssp CEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBC
T ss_pred CcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccC------CCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHH
Q 009618 374 PLINKAALEKVETFVEDAVSKGAKVLLGGRRHS------LGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEA 447 (530)
Q Consensus 374 pli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~------~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ea 447 (530)
|++++.+++++++++++++.+||++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 p~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~ea 417 (503)
T d1a4sa_ 338 GLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEV 417 (503)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEEcCCHHHH
Confidence 999999999999999999999999999997532 35789999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEec
Q 009618 448 IHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 448 i~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~~ 526 (530)
|+++|+++|||++||||+|.+++.++++++++|+||||++....+.+||||+|.||+|+++|.+||++||+.|+|+++-
T Consensus 418 i~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~~ 496 (503)
T d1a4sa_ 418 LQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVIVEM 496 (503)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEEECC
T ss_pred HHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeEEEEEcC
Confidence 9999999999999999999999999999999999999998888889999999999999999999999999999999873
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.3e-104 Score=845.07 Aligned_cols=470 Identities=36% Similarity=0.615 Sum_probs=440.8
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
+.+.||||+|+.+ ++++++++||+||+++++++.++.+|++.|+++|++||+.|+.++..+|.++|+++++.|++++++
T Consensus 2 ~~~l~I~G~~v~~-~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~e 80 (474)
T d1wnda_ 2 QHKLLINGELVSG-EGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQV 80 (474)
T ss_dssp CCCEEETTEEECC-CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCccEECCeEeCC-CCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHH
Confidence 4678999999986 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHh
Q 009618 134 LGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVG 212 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 212 (530)
|++++++|+|||+.++.. ++..+..+++|++.......+...+...++...+++++|+|||++|+|||||+.+.+++++
T Consensus 81 la~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a 160 (474)
T d1wnda_ 81 FAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLA 160 (474)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHH
Confidence 999999999999999975 5556666667776655444333333344577889999999999999999999999999999
Q ss_pred hHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcc
Q 009618 213 PALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGT 292 (530)
Q Consensus 213 ~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~ 292 (530)
+||++||+||+|||+.+|+++..++++++++ +|+|++|+|++++.++++.|++||+|++|.||||+++|+.|++.++++
T Consensus 161 ~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~~~ 239 (474)
T d1wnda_ 161 PALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASS 239 (474)
T ss_dssp HHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHGGG
T ss_pred HHHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhhcC
Confidence 9999999999999999999999999998775 999999999998889999999999999999999999999999999999
Q ss_pred cceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCccc
Q 009618 293 VKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQ 372 (530)
Q Consensus 293 ~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~ 372 (530)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|+|.++++++
T Consensus 240 ~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~ 319 (474)
T d1wnda_ 240 IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTEL 319 (474)
T ss_dssp TCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCB
T ss_pred CCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHhhccCCcCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCe-EeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009618 373 GPLINKAALEKVETFVEDAVSKGAK-VLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMA 451 (530)
Q Consensus 373 Gpli~~~~~~~~~~~i~~a~~~Ga~-vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~ 451 (530)
||+++..+.+++.+++++++.+|+. ++.|+......|+|++|||+.++++++++++||+||||++|++|+|+||||+++
T Consensus 320 Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~a 399 (474)
T d1wnda_ 320 GPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWA 399 (474)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHHHHHHH
Confidence 9999999999999999999999985 555655544567999999999999999999999999999999999999999999
Q ss_pred HcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 452 NDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 452 n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+||++||+.|+|+++
T Consensus 400 n~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 400 NDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred hCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 99999999999999999999999999999999999888788999999999999999999999999999999885
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.9e-100 Score=821.94 Aligned_cols=468 Identities=32% Similarity=0.507 Sum_probs=438.6
Q ss_pred cccceecCEeeeCCCCCeEEeecCC-CCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPA-TGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKE 132 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~-~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 132 (530)
..++||||+|+.+ +++++++||. ||+++++++.++.+|+++|+++|++||+.|+.+|.++|.++|+++++.|+++++
T Consensus 37 ~~~l~I~G~~v~s--~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ 114 (516)
T d1uzba_ 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKR 114 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCCeEEcCEEECC--CCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999985 5689999995 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcccC-CCCCCceeEEEEeeceEEEEECCCCcchHHHHHHH
Q 009618 133 ELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIP-ATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKV 211 (530)
Q Consensus 133 ~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 211 (530)
+|++++++|+|||+.+++.|+..++++++||+..+....+.... ...++...+..++|+|||++|+|||||+.++++++
T Consensus 115 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~ 194 (516)
T d1uzba_ 115 ELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMI 194 (516)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccccccc
Confidence 99999999999999999999999999999999988877654322 23346777889999999999999999999999999
Q ss_pred hhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHh-
Q 009618 212 GPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAA- 290 (530)
Q Consensus 212 ~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a- 290 (530)
++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|++.++++.|++||+|++|.||||+.+|+.|++.++
T Consensus 195 ~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~ 274 (516)
T d1uzba_ 195 VGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGR 274 (516)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTS
T ss_pred cchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988899999999999999999999999999999887
Q ss_pred -----cccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCC
Q 009618 291 -----GTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDG 365 (530)
Q Consensus 291 -----~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p 365 (530)
.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++++.++++++++| |
T Consensus 275 ~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~g-~ 353 (516)
T d1uzba_ 275 LAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-P 353 (516)
T ss_dssp CCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS-C
T ss_pred cccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhcccC-C
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHH
Q 009618 366 FGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 366 ~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
.++++++||+++..+++++++++++++++|+.+ +||...+..|+|++|||+.++++++++++||+||||++|++|+|+|
T Consensus 354 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~e 432 (516)
T d1uzba_ 354 AEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFA 432 (516)
T ss_dssp GGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHH
T ss_pred CcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchhhcCCCcCceEEEEEeCCHH
Confidence 688999999999999999999999999888766 4555544457999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCC--CCCCcccCCCCCCCCCC-ChHHHHHhhheeeEE
Q 009618 446 EAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIS--TEVAPFGGVKQSGLGRE-GSKYGMDEFLEIKYV 522 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~--~~~~pfGG~~~SG~G~~-~g~~~l~~~~~~k~v 522 (530)
|||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+|.||+|++ |+.++|++|++.|+|
T Consensus 433 eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v 512 (516)
T d1uzba_ 433 EALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512 (516)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEE
T ss_pred HHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCCCCcCCCCCcCcccccCCcccchHHHHHHhCCeeeE
Confidence 999999999999999999999999999999999999999987653 45899999999999998 568999999999999
Q ss_pred EEe
Q 009618 523 CLG 525 (530)
Q Consensus 523 ~~~ 525 (530)
+.+
T Consensus 513 ~~r 515 (516)
T d1uzba_ 513 AER 515 (516)
T ss_dssp EEE
T ss_pred EEc
Confidence 853
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=3.4e-95 Score=780.14 Aligned_cols=467 Identities=31% Similarity=0.503 Sum_probs=433.9
Q ss_pred CccccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcH-hhhcCCHHHHHHHHHHHHHHHHHh
Q 009618 52 LLRTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAH 130 (530)
Q Consensus 52 ~~~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~-~w~~~~~~~R~~iL~~~a~~l~~~ 130 (530)
+...++||||+|+. ++++++++||.||+++++++.++.+|++.|+++|++|++ .|+.+|..+|+++|+++++.|+++
T Consensus 14 ~~~~~~~I~G~~~~--sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~ 91 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGG--SGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERN 91 (499)
T ss_dssp EEEECEECSSSEEC--CSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEECCeECC--CCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHh
Confidence 34578999999996 578999999999999999999999999999999988887 799999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCccc----CCCCCCceeEEEEeeceEEEEECCCCcchHH
Q 009618 131 KEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEII----PATLPDRRLFVLKQPVGVAGAITPWNFPLAM 206 (530)
Q Consensus 131 ~~~la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~~~----~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~ 206 (530)
+++|++++++|+|||..+++.|+..+++.++|++...++..+... +....+...+++++|+|||++|+|||||+.+
T Consensus 92 ~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~~ 171 (499)
T d1ky8a_ 92 LDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 171 (499)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccchh
Confidence 999999999999999999999999999999999988877665432 2223356778999999999999999999999
Q ss_pred HHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHH
Q 009618 207 ITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLM 286 (530)
Q Consensus 207 ~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 286 (530)
+++++++||++||+||+|||+.+|+++..+++++.++|+|+++++++.+++ +.+..|+.|++|+.+.||||+.+++.++
T Consensus 172 ~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~-~~~~~l~~~~~i~~v~ftGs~~~g~~i~ 250 (499)
T d1ky8a_ 172 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 250 (499)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCG-GGGHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred hhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCCh-HHHHHHhhccceeEEEeecccccceEEe
Confidence 999999999999999999999999999999999999999999999999854 5678999999999999999999999999
Q ss_pred HHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCC
Q 009618 287 AGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGF 366 (530)
Q Consensus 287 ~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~ 366 (530)
+.++ .+|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++|+|.
T Consensus 251 ~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~l~~G~p~ 328 (499)
T d1ky8a_ 251 KVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPR 328 (499)
T ss_dssp HHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTT
T ss_pred eccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHhCccCCCC
Confidence 8775 58999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceE---ecCCCCCCcccccccccceEEEEEeCC
Q 009618 367 GEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTV---LSNVKSEMLVSREEVFGPVAPLLCFKT 443 (530)
Q Consensus 367 ~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptv---l~~~~~~~~~~~eE~FGPv~~i~~~~~ 443 (530)
|+++++||+++..+++++++++++++.+||+++.||.... ..++.+++ ...+.+||++++||+||||++|++|+|
T Consensus 329 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl~v~~~~~ 406 (499)
T d1ky8a_ 329 DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKD 406 (499)
T ss_dssp STTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE--TTEECCEEEECCHHHHTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc--ccccccccccccccCCCCChhhhccccCceEEEEEcCC
Confidence 9999999999999999999999999999999999998763 23333333 344567999999999999999999999
Q ss_pred HHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCCCC-CCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 444 EEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLIST-EVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 444 ~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~~~-~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
.||||+++|+++|||++||||+|.++++++++++++|+|+||+..... +.+||||+|.||+|+++|.+|+++||+.|+|
T Consensus 407 ~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i 486 (499)
T d1ky8a_ 407 LDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTI 486 (499)
T ss_dssp HHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEEEE
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHHhhCEEEE
Confidence 999999999999999999999999999999999999999999977644 6899999999999999999999999999999
Q ss_pred EEe
Q 009618 523 CLG 525 (530)
Q Consensus 523 ~~~ 525 (530)
+++
T Consensus 487 ~~~ 489 (499)
T d1ky8a_ 487 VFN 489 (499)
T ss_dssp EEE
T ss_pred EEc
Confidence 986
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.3e-92 Score=756.88 Aligned_cols=464 Identities=34% Similarity=0.560 Sum_probs=436.0
Q ss_pred cccceecCEeeeCCCCCeEEeecCCCCCEEEEEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHH
Q 009618 54 RTQGLIGGKWIDAYDGKTLEVHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEE 133 (530)
Q Consensus 54 ~~~~~i~G~~~~~~~~~~~~v~~P~~g~~i~~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 133 (530)
.++|||||+|+.+ +++++++||.||+++++++.++.+|++.|+++|++|++.|+.++.++|.++|+++++.|++++++
T Consensus 3 ~~~n~I~G~~~~~--~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~ 80 (474)
T d1euha_ 3 QYKNYVNGEWKLS--ENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEK 80 (474)
T ss_dssp BCCEEETTEEECC--SSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred cccceecCeecCC--CCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHH
Confidence 3589999999874 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc-----ccCCCCCCceeEEEEeeceEEEEECCCCcchHHHH
Q 009618 134 LGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGE-----IIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT 208 (530)
Q Consensus 134 la~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~g~-----~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~ 208 (530)
|++++++|+|||..+++.|+...+.++++++......... ..+....+...+++++|+|||++|+|||||+..++
T Consensus 81 la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~ 160 (474)
T d1euha_ 81 IGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAG 160 (474)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHH
T ss_pred HHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhh
Confidence 9999999999999999999999999999998877554322 12222345667889999999999999999999999
Q ss_pred HHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHH
Q 009618 209 RKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAG 288 (530)
Q Consensus 209 ~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 288 (530)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|++++.++++.|+.||+|+.|.||||+.+++.+++.
T Consensus 161 ~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~~ 240 (474)
T d1euha_ 161 SKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 240 (474)
T ss_dssp HHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred hhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEecCccccccchhhh
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999988
Q ss_pred HhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCC
Q 009618 289 AAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGE 368 (530)
Q Consensus 289 ~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~ 368 (530)
++ .||+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|+++++++...++.|++.+.
T Consensus 241 a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 318 (474)
T d1euha_ 241 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDD 318 (474)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSCGGGT
T ss_pred cc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhhccccCcccc
Confidence 76 6899999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHH
Q 009618 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAI 448 (530)
Q Consensus 369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai 448 (530)
. +++|++.....+++...+.++...++..+.++... |+|++|||+..++++|++++||+||||++|++|+|+||||
T Consensus 319 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai 394 (474)
T d1euha_ 319 A-DITPLIDTKSADYVEGLINDANDKGATALTEIKRE---GNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAI 394 (474)
T ss_dssp C-SBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEE---TTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHHHHH
T ss_pred c-ccccccchHHHHHHHHHHHhhhcccccccccCCCC---CCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCHHHHH
Confidence 5 57999999999999999999999999888766543 7999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC-CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 449 HMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI-STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 449 ~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~-~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
+++|+++|||+++|||+|.++++++++++++|+|+||++.. ..+.+||||+|+||+|+++|++||++||+.|+|+++
T Consensus 395 ~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 472 (474)
T d1euha_ 395 EISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFD 472 (474)
T ss_dssp HHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEEEe
Confidence 99999999999999999999999999999999999999765 456899999999999999999999999999999986
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-86 Score=702.81 Aligned_cols=422 Identities=30% Similarity=0.462 Sum_probs=387.4
Q ss_pred HHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhC
Q 009618 94 TKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAV-GEVDYGAKFIEFYAEEAKRVYG 172 (530)
Q Consensus 94 ~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~g 172 (530)
+++|+++|++||+.|+.+|.++|.++|++++++|++|+++|++++++|+|||..++. .|+..+++.++++++....+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 689999999999999999999999999999999999999999999999999999996 6999999999999888766543
Q ss_pred cc---cCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHHHHHcCCCCcc
Q 009618 173 EI---IPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAELALQAGIPPGV 249 (530)
Q Consensus 173 ~~---~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~gv 249 (530)
.. ......+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+++++++. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccc
Confidence 32 122234567788999999999999999999999999999999999999999999999999999988775 99999
Q ss_pred EEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEecCCCHHHHHHHHHHHHhhcc
Q 009618 250 VNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVFDDADLNVAVNGALAAKFRNS 329 (530)
Q Consensus 250 v~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~~dAD~~~a~~~i~~s~f~~~ 329 (530)
++++.+.+... ..+. ++.++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 161 ~~~~~~~~~~~-~~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~ 238 (446)
T d1ad3a_ 161 YLVVKGGVPET-TELL-KERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNS 238 (446)
T ss_dssp EEECCCSHHHH-HHHT-TSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTT
T ss_pred cccccccchhh-hhhc-ccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCC
Confidence 99999865444 3444 567999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCC
Q 009618 330 GQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGM 409 (530)
Q Consensus 330 GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~ 409 (530)
||.|++++|+|||++++|+|+++|.+.++.+ +|+|.++++++||++++.+.+++..+++. ++...|+... .++
T Consensus 239 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~~-~~~ 311 (446)
T d1ad3a_ 239 GQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDN-----QKVAHGGTWD-QSS 311 (446)
T ss_dssp TCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTT-----SCEEECCCEE-TTT
T ss_pred CCccccCCccccccchhHHHHHhhhhhhhee-ecccccccccccchhhhhhhhhhhccccc-----hhcccceeec-CCC
Confidence 9999999999999999999999999999887 89999999999999999999999887754 4555555443 456
Q ss_pred ceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhccceEEEECCCCC
Q 009618 410 TFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLI 489 (530)
Q Consensus 410 ~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l~~G~v~vN~~~~ 489 (530)
.|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||++..
T Consensus 312 ~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~ 391 (446)
T d1ad3a_ 312 RYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIV 391 (446)
T ss_dssp TEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSG
T ss_pred CCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred --CCCCCcccCCCCCCCCCCChHHHHHhhheeeEEEEe
Q 009618 490 --STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 525 (530)
Q Consensus 490 --~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~~ 525 (530)
..+.+||||+|.||+|+++|.+||++||+.|+|+++
T Consensus 392 ~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 392 HITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429 (446)
T ss_dssp GGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred CCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence 456899999999999999999999999999999986
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=1.7e-82 Score=680.53 Aligned_cols=439 Identities=20% Similarity=0.270 Sum_probs=377.9
Q ss_pred CCeEEeecCCCCCEEE-EEeCCCHHHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Q 009618 69 GKTLEVHNPATGEVIA-NVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLK 147 (530)
Q Consensus 69 ~~~~~v~~P~~g~~i~-~v~~~~~~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~ 147 (530)
+++|+++||+|||.|+ +++.++.+|+++|+++|++||+.|+.++..+|.++|+++++.|++|+++|++++++|+|||..
T Consensus 2 ~~~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~ 81 (504)
T d1ez0a_ 2 DNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEV 81 (504)
T ss_dssp CCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHH
T ss_pred CCeEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 5799999999999997 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccc--------CCCCCCceeEEEEeeceEEEEECCCCcchHHHH--HHHhhHhhc
Q 009618 148 EAVGEVDYGAKFIEFYAEEAKRVYGEII--------PATLPDRRLFVLKQPVGVAGAITPWNFPLAMIT--RKVGPALAC 217 (530)
Q Consensus 148 ~a~~Ev~~~~~~l~~~a~~~~~~~g~~~--------~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~--~~l~~ALaa 217 (530)
+++.|+..++++++||++..++..+... ....++...+..++|+|||++|+|||||+.+.+ +++++||++
T Consensus 82 ~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaa 161 (504)
T d1ez0a_ 82 RLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAA 161 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHH
Confidence 9999999999999999998877543321 112234567788999999999999999997544 699999999
Q ss_pred CCEEEeecCCCcHHHHHHHH----HHHHHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhccc
Q 009618 218 GCTVVVKPSEFTPLTALAAA----ELALQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTV 293 (530)
Q Consensus 218 GN~VVlKps~~~~~~~~~l~----~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~ 293 (530)
||+||+|||+.+|.++..+. ++++++|+|+|++|+|+|++.++++.|++||+|++|+||||+.+|+.|++.+++++
T Consensus 162 GN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~ 241 (504)
T d1ez0a_ 162 GCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 241 (504)
T ss_dssp TCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred hccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccc
Confidence 99999999999999887665 55668899999999999988899999999999999999999999999999999988
Q ss_pred ceE--EeecCCCccEEEecCCCHHHHH--HHHHHHHhhccCCccccCCeEEEehhhH-HHHHHHHHHHhhccccCCCCCC
Q 009618 294 KKV--SLELGGNAPCIVFDDADLNVAV--NGALAAKFRNSGQTCVCANRVLVQEGIY-EKFADAFSKAVKNLKVGDGFGE 368 (530)
Q Consensus 294 ~~~--~lelgG~~~~iV~~dAD~~~a~--~~i~~s~f~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~ 368 (530)
+|+ ++|||||||+||++|||+++|+ +.++.++|.|+||.|++++|+||+++.+ +.|++.+.+.++.. ++
T Consensus 242 ~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~------~~ 315 (504)
T d1ez0a_ 242 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ------SP 315 (504)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC------CC
T ss_pred ccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhhc------cc
Confidence 775 5599999999999999999874 5789999999999999999999877655 46777777665532 45
Q ss_pred CcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcccCCCCceEeceEec---CCCCCCcccccccccceEEEEEeCCHH
Q 009618 369 GVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRRHSLGMTFYEPTVLS---NVKSEMLVSREEVFGPVAPLLCFKTEE 445 (530)
Q Consensus 369 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~---~~~~~~~~~~eE~FGPv~~i~~~~~~~ 445 (530)
++.+||+++..+.+++ ++.+...|+++..|+... .+..|+++. ++..++++++||+||||++|++|+|+|
T Consensus 316 ~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~ 388 (504)
T d1ez0a_ 316 STLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAES----PCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVA 388 (504)
T ss_dssp BCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCCT----TSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHH
T ss_pred ccccccchhhhhhhhh---hhhhhhhhhhcccccccc----cccCCccccccccccccchhhcccccCCeeeeeecCCHH
Confidence 7889999998887665 566677888888887653 334444443 344578899999999999999999999
Q ss_pred HHHHHHHcCCCCcEEEEEcC--CHHHHHHHHhhcc--ceEEEECCCCCC---C----CCCcccCCCCCCCCCCChHHHHH
Q 009618 446 EAIHMANDTNAGLAAYIFTN--NLQRTWRVSEALE--YGLVGVNEGLIS---T----EVAPFGGVKQSGLGREGSKYGMD 514 (530)
Q Consensus 446 eai~~~n~~~~gL~a~v~s~--d~~~~~~~a~~l~--~G~v~vN~~~~~---~----~~~pfGG~~~SG~G~~~g~~~l~ 514 (530)
|||+++|+++|||+++|||+ |..++.+++++|+ +|+|+||+++.+ . ...||||.|.||.|+ .|.+||+
T Consensus 389 eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~~-~G~~~i~ 467 (504)
T d1ez0a_ 389 DMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS-VGAEAIH 467 (504)
T ss_dssp HHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS-SSGGGGG
T ss_pred HHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCCc-chHHHHH
Confidence 99999999999999999996 5568999999997 899999986542 1 235899999999554 6889999
Q ss_pred hhheeeE
Q 009618 515 EFLEIKY 521 (530)
Q Consensus 515 ~~~~~k~ 521 (530)
+|++..+
T Consensus 468 ~f~r~v~ 474 (504)
T d1ez0a_ 468 RWLRPVA 474 (504)
T ss_dssp GGEEEEE
T ss_pred HHhchhh
Confidence 9987543
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.4e-67 Score=551.32 Aligned_cols=389 Identities=19% Similarity=0.165 Sum_probs=315.8
Q ss_pred HHHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH------------HHHHHHH
Q 009618 92 KETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE------------VDYGAKF 159 (530)
Q Consensus 92 ~~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~E------------v~~~~~~ 159 (530)
+|+.+++++|++||+.|+.+|..+|.++|++++++|++|+++|++++++|+||+..+++.| ++.+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887655 6667788
Q ss_pred HHHHHHHHHHHhCcccCCCCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAEL 239 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~ 239 (530)
+++++.......+...+... .......++|+||++++.|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSWVR-EDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEEEC-TTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccccc-ccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 88887655444333322222 23456778899999999999999999999999999999999999999999999999999
Q ss_pred HHHc----CCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCc-cEEEecCCCH
Q 009618 240 ALQA----GIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNA-PCIVFDDADL 314 (530)
Q Consensus 240 l~~a----GlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~-~~iV~~dAD~ 314 (530)
++++ |+|.++++.+.+.+.+.+..+..++. +.||||+..++.+.+.++++.+++++|+||+| ++||++|||+
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~dAd~ 236 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENTDRSLVLEMIRLRE---YLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADL 236 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTT---TCSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTTSCH
T ss_pred HHhhhhhccccccccccccccchhhhhhcccccc---cCeEEEcccHHHHHHHhhhccccceecccCCCCCeecccccch
Confidence 8776 55555577776655566666665444 44444444555667777777888888888755 6788899999
Q ss_pred HHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHC
Q 009618 315 NVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSK 394 (530)
Q Consensus 315 ~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ 394 (530)
+.|++.++.++|.+ ||.|++.+|+|||+++||+|+++|.+...+..++.+.++.. .
T Consensus 237 ~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~--------------~--------- 292 (414)
T d1o20a_ 237 KKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT--------------R--------- 292 (414)
T ss_dssp HHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH--------------H---------
T ss_pred hhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCccccchhh--------------h---------
Confidence 99999999998876 99999999999999999999999999888776554322111 0
Q ss_pred CCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHH
Q 009618 395 GAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVS 474 (530)
Q Consensus 395 Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a 474 (530)
++.+.+... ....++||+||||++|++|+|+||||+++|+++|||+++|||+|.+++++++
T Consensus 293 ----------------~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~ 353 (414)
T d1o20a_ 293 ----------------EIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFV 353 (414)
T ss_dssp ----------------HHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHH
T ss_pred ----------------hhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHH
Confidence 011111111 1234679999999999999999999999999999999999999999999999
Q ss_pred hhccceEEEECCCCCCCCCCcccCCCCCCCCCC----ChHHHHHhhheeeEEEEecC
Q 009618 475 EALEYGLVGVNEGLISTEVAPFGGVKQSGLGRE----GSKYGMDEFLEIKYVCLGDM 527 (530)
Q Consensus 475 ~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G~~----~g~~~l~~~~~~k~v~~~~~ 527 (530)
+++++|+|+||+++.+....|||+.++||+|+. +|++||++||+.|+|++++.
T Consensus 354 ~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~~ 410 (414)
T d1o20a_ 354 SEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGEY 410 (414)
T ss_dssp HHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECSS
T ss_pred HhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECCC
Confidence 999999999999776555667777777776433 38999999999999998754
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.2e-53 Score=440.68 Aligned_cols=399 Identities=19% Similarity=0.159 Sum_probs=280.9
Q ss_pred HHHHHHHHHHHhcHhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHHcCCCHHHHH-------HHHHHHHHH
Q 009618 93 ETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQL------ITLEQGKPLKEAV-------GEVDYGAKF 159 (530)
Q Consensus 93 ~~~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~------~~~e~Gk~~~~a~-------~Ev~~~~~~ 159 (530)
.+++.++.|++|++.|+.++.++|.++|+++++.|++|+++|++. .+.+.|++..... ..++..++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 467788999999999999999999999999999999999999885 3445565533210 123444444
Q ss_pred HHHHHHHHHHHhCcccCC--CCCCceeEEEEeeceEEEEECCCCcchHHHHHHHhhHhhcCCEEEeecCCCcHHHHHHHH
Q 009618 160 IEFYAEEAKRVYGEIIPA--TLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAA 237 (530)
Q Consensus 160 l~~~a~~~~~~~g~~~~~--~~~g~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~ 237 (530)
++..+..... .|..... ...+...+..+.|+||+++| ||++| ..++.+.++||++||+||+||++.++.++..++
T Consensus 84 l~~i~~~~dp-vg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDP-VGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCS-SSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhcccc-ceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 4443332111 1221111 12366778889999999988 66777 677788899999999999999999999998877
Q ss_pred HHH--------HHcCCCCccEEeecCCchhHHhHhhcCCCceEEEeeCCHHHHHHHHHHHhcccceEEeecCCCccEEEe
Q 009618 238 ELA--------LQAGIPPGVVNVVMGNAPDIGDALLTSPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIVF 309 (530)
Q Consensus 238 ~~l--------~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~lelgG~~~~iV~ 309 (530)
+++ .++|+|+++++++++ ..+.++.|..|++|+.|+||||....+.+.+.+ .+|++.++||++|+||+
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~-~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~---~~pvi~~~~G~~~~~Vd 236 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIET-RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLD 236 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCC-C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEEC
T ss_pred HHHHHhhhhhccccCCCCceEEEecc-hhHHHHHhccCCCCceEEEecCCceeeeeeccc---cceEEEecCCccceeec
Confidence 665 467999999999987 567889999999999999999999988887655 35899999999999999
Q ss_pred cCCCHHHHHHHHHHHHhhccCCccccCCeEEEehhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHH
Q 009618 310 DDADLNVAVNGALAAKFRNSGQTCVCANRVLVQEGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVE 389 (530)
Q Consensus 310 ~dAD~~~a~~~i~~s~f~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~ 389 (530)
+|||+|.|++.++.++|.+.|| |++.++++||+++++.|...+....+. |. .+. .++. +.....
T Consensus 237 ~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---gv------~l~--~~~~----~~~~~~ 300 (436)
T d1vlua_ 237 EDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG---GV------TIH--ATKD----LKTAYF 300 (436)
T ss_dssp TTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH---CC------CBE--ECHH----HHHHHH
T ss_pred ccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC---Cc------EEE--eCHH----HHHHhh
Confidence 9999999999999999999987 788999999999998886655444332 10 010 1222 222222
Q ss_pred HHHHCCCeEeeCCcccCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHH
Q 009618 390 DAVSKGAKVLLGGRRHSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQR 469 (530)
Q Consensus 390 ~a~~~Ga~vl~gg~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~ 469 (530)
....+.+ .. .+....|++....+. .+.+|.|+|++.|++++|+||||+++|+.++|||++|||+|.+.
T Consensus 301 ~~~~~~~------~~---~~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~ 368 (436)
T d1vlua_ 301 DKLNELG------KL---TEAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKAN 368 (436)
T ss_dssp HHHHHHT------CC---CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHH
T ss_pred hhhhhcc------cc---cccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHH
Confidence 2111111 11 112333444333222 25799999999999999999999999999999999999999999
Q ss_pred HHHHHhhccceEEEECCCCCCCCCCcccCCCCCCCC--C--CChHHHHHhhheeeEEEEec
Q 009618 470 TWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLG--R--EGSKYGMDEFLEIKYVCLGD 526 (530)
Q Consensus 470 ~~~~a~~l~~G~v~vN~~~~~~~~~pfGG~~~SG~G--~--~~g~~~l~~~~~~k~v~~~~ 526 (530)
+++|++++++|.|+||+++.+....+||--.+-|+. + .+|+.||+++|..|++..++
T Consensus 369 a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 369 AEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp HHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred HHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 999999999999999999887777778732333432 2 27899999999999998874
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=0.045 Score=53.64 Aligned_cols=257 Identities=18% Similarity=0.212 Sum_probs=156.2
Q ss_pred CCCceeEEEEeeceEEEEECCCC---cchHHHHHHHhhHhhcCCEE--EeecCCCcHHHHHHHHHHHHHcCCCCccEEee
Q 009618 179 LPDRRLFVLKQPVGVAGAITPWN---FPLAMITRKVGPALACGCTV--VVKPSEFTPLTALAAAELALQAGIPPGVVNVV 253 (530)
Q Consensus 179 ~~g~~~~~~~~P~GVv~~i~p~n---~P~~~~~~~l~~ALaaGN~V--VlKps~~~~~~~~~l~~~l~~aGlP~gvv~~v 253 (530)
.+|......+.|+--|++-.|.- ||.. ++....||..+|+.= +.-|+...|.+ .-..+.+|+.. +.
T Consensus 109 ~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSs-vLM~aiPAkvAGV~~Ivv~tPp~~~~~~----l~aa~~~Gv~~----iy 179 (431)
T d1k75a_ 109 QPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPIADEI----LYAAQLCGVQD----VF 179 (431)
T ss_dssp ETTEEEEEEEEECSEEEEECCCSSSCCHHH-HHHHHHHHHHHTCSEEEEEECSSCCHHH----HHHHHHTTCCE----EE
T ss_pred cCCceeeeeeeehhhheeeccCCCccchHH-HHHHHHHHHhcCCCceeEEeCCCCcchH----HHHHHHcCccc----eE
Confidence 35667778889999999999964 5543 445678999999854 45565555542 34456677763 33
Q ss_pred cCCchhHHhHhhc----CCCceEEEeeCCHHHHHHHHHHHhcccceEEee-cCCCccE--EEecCCCHHHHHHHHHHHHh
Q 009618 254 MGNAPDIGDALLT----SPQVRKITFTGSTAVGKKLMAGAAGTVKKVSLE-LGGNAPC--IVFDDADLNVAVNGALAAKF 326 (530)
Q Consensus 254 ~g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~~a~~~~~~~le-lgG~~~~--iV~~dAD~~~a~~~i~~s~f 326 (530)
.-.|.+.-.+|.- -|.||+|+=.|+.=|...=..-.. ....+-.. +-|.+=+ |-++++|.++++.+++..+=
T Consensus 180 ~~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g-~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQAE 258 (431)
T d1k75a_ 180 NVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQ-RLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAE 258 (431)
T ss_dssp ECCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHH-STTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred ecCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcc-cCCccccccccCCceEEEEecCCCCHHHHHHHHHhccC
Confidence 2225554455554 568999998888766433211121 11112222 2255443 33456899999999988876
Q ss_pred hccCCccccCCeEEEe--hhhHHHHHHHHHHHhhccccCCCCCCCcccCccCCHHHHHHHHHHHHHHHHCCCeEeeCCcc
Q 009618 327 RNSGQTCVCANRVLVQ--EGIYEKFADAFSKAVKNLKVGDGFGEGVVQGPLINKAALEKVETFVEDAVSKGAKVLLGGRR 404 (530)
Q Consensus 327 ~~~GQ~C~a~~~v~V~--~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~ 404 (530)
.... .+-++|. +++.+++.+.+.+.++.+.- . +..+....
T Consensus 259 H~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~l~r---------------~-------~i~~~s~~----------- 300 (431)
T d1k75a_ 259 HGPD-----SQVILLTPAADMARRVAEAVERQLAELPR---------------A-------ETARQALN----------- 300 (431)
T ss_dssp TCTT-----CEEEEEESCHHHHHHHHHHHHHHHHTCSS---------------C-------HHHHHHHT-----------
T ss_pred Cccc-----ceeEEEeccHHHHHHHHHHHHHHhhhchH---------------H-------HHHHhhhc-----------
Confidence 6544 2345664 45556666666666654421 0 00111110
Q ss_pred cCCCCceEeceEecCCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCcEEEEEcCCHHHHHHHHhhc-cceEEE
Q 009618 405 HSLGMTFYEPTVLSNVKSEMLVSREEVFGPVAPLLCFKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEAL-EYGLVG 483 (530)
Q Consensus 405 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~FGPv~~i~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~~~~~a~~l-~~G~v~ 483 (530)
-. .++.++|++|+++++|..-.= -..|.++|.. .+..++ ++|.|+
T Consensus 301 --------------------------~~----~ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~nAGsIf 346 (431)
T d1k75a_ 301 --------------------------AS----RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVF 346 (431)
T ss_dssp --------------------------TC----EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCCCSEEE
T ss_pred --------------------------cc----eEEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhhcchhh
Confidence 01 134579999999999995433 3677788875 466666 599999
Q ss_pred ECCCCC---------CCCCCcccCCCCCCCCCCChHHHHHhhheeeEE
Q 009618 484 VNEGLI---------STEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 522 (530)
Q Consensus 484 vN~~~~---------~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v 522 (530)
+..++. .+..+|=|| .+|..|.-+...|++.-++
T Consensus 347 lG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 347 LGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 389 (431)
T ss_dssp ESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred cCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeE
Confidence 988664 133566554 5566555677888876554
|