Citrus Sinensis ID: 009629
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| 15810385 | 551 | unknown protein [Arabidopsis thaliana] | 0.990 | 0.952 | 0.604 | 0.0 | |
| 18420285 | 551 | protein trichome birefringence-like 16 [ | 0.990 | 0.952 | 0.604 | 0.0 | |
| 145334527 | 533 | protein trichome birefringence-like 16 [ | 0.990 | 0.984 | 0.604 | 0.0 | |
| 255550409 | 490 | conserved hypothetical protein [Ricinus | 0.756 | 0.818 | 0.767 | 0.0 | |
| 297808139 | 555 | hypothetical protein ARALYDRAFT_910111 [ | 0.992 | 0.947 | 0.597 | 0.0 | |
| 225444688 | 519 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.994 | 0.643 | 0.0 | |
| 356545780 | 680 | PREDICTED: uncharacterized protein LOC10 | 0.988 | 0.770 | 0.589 | 0.0 | |
| 357479407 | 512 | hypothetical protein MTR_4g125060 [Medic | 0.943 | 0.976 | 0.599 | 0.0 | |
| 449446632 | 558 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.942 | 0.578 | 0.0 | |
| 224068484 | 392 | predicted protein [Populus trichocarpa] | 0.643 | 0.869 | 0.835 | 1e-179 |
| >gi|15810385|gb|AAL07080.1| unknown protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/538 (60%), Positives = 393/538 (73%), Gaps = 13/538 (2%)
Query: 1 MKRTFFRLRGKELSLILIVLVCTTIFVWTWDRTPFLATFLPPKSRFLWLSSDAFTNSVSP 60
MKR R R +++S++L+VLVC T+ +WTWDRTP A FLPP+S +L L S+ + P
Sbjct: 19 MKRGALRRRARDISVMLVVLVCATVVIWTWDRTPTSA-FLPPESHYLKLQSEEKVEKL-P 76
Query: 61 ESQIHMNKDISTSA---ENKTVNYQEGQLSNILAPAGPVAETIPAKRKENTESLA--EGQ 115
+ KD +SA NK + ++ + N + E +
Sbjct: 77 TALNTETKDSYSSAIPFVNKEESKEDSSDNKDTEEEEEKQVEEVTVSNSNRGKIPTIEEK 136
Query: 116 AKDKHVVEAE---KNSSAENSTILTKTKENGKKNLGEKNSKLEKESVDRRSSADSANLSS 172
+ V+ +E + + L K K GE E + +S +N+ +
Sbjct: 137 KGEHEVIASEPKYRKTPTREDFKLEKVKHEVAVGEGEAT---ETTHIKETNSDPKSNILA 193
Query: 173 SERIKADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAY 232
++ + D ST NQACNYAKGKWVVD+ RPLYSG+ CKQWL+ MWACRLMQRTDFA+
Sbjct: 194 TDEERTDGTSTARITNQACNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAF 253
Query: 233 ERLRWQPKDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDV 292
E LRWQPKDC MEEFEGS+FL RM+++TLAF+GDSLGRQQFQS+MCM++GGKER DV DV
Sbjct: 254 ESLRWQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDV 313
Query: 293 GKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPP 352
G E+G + P G RP GWAYRFP TNTT+LY+WS+ LCD++PLNIT+PATE+AMHLDRPP
Sbjct: 314 GPEFGFITPEGGARPGGWAYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPP 373
Query: 353 AFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIV 412
AFLRQYL K DVLV+NTGHHWNRGKL N+WVMHV G+PNTNRK+A + AKNFTIHS V
Sbjct: 374 AFLRQYLQKIDVLVMNTGHHWNRGKLNGNKWVMHVNGVPNTNRKLAALGNAKNFTIHSTV 433
Query: 413 SWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGS 472
SWVNSQLP HP LKAFYRS+SPRHFV G+WNTGGSC+NTTPMSIGKEVLQ+ES DYSAG
Sbjct: 434 SWVNSQLPLHPGLKAFYRSLSPRHFVGGEWNTGGSCNNTTPMSIGKEVLQEESSDYSAGR 493
Query: 473 AVKGTGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 530
AVKGTGVKLLDITALS +RDEGHIS++SI+ASRGVQDCLHWCLPGVPDTWNEILFA +
Sbjct: 494 AVKGTGVKLLDITALSHIRDEGHISRFSISASRGVQDCLHWCLPGVPDTWNEILFAMI 551
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420285|ref|NP_568398.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|238481331|ref|NP_001154728.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005492|gb|AED92875.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005494|gb|AED92877.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|145334527|ref|NP_001078609.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] gi|332005493|gb|AED92876.1| protein trichome birefringence-like 16 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255550409|ref|XP_002516255.1| conserved hypothetical protein [Ricinus communis] gi|223544741|gb|EEF46257.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297808139|ref|XP_002871953.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] gi|297317790|gb|EFH48212.1| hypothetical protein ARALYDRAFT_910111 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|225444688|ref|XP_002277730.1| PREDICTED: uncharacterized protein LOC100247308 [Vitis vinifera] gi|297738542|emb|CBI27787.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356545780|ref|XP_003541313.1| PREDICTED: uncharacterized protein LOC100788136 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357479407|ref|XP_003609989.1| hypothetical protein MTR_4g125060 [Medicago truncatula] gi|355511044|gb|AES92186.1| hypothetical protein MTR_4g125060 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449446632|ref|XP_004141075.1| PREDICTED: uncharacterized protein LOC101210180 [Cucumis sativus] gi|449488111|ref|XP_004157942.1| PREDICTED: uncharacterized protein LOC101228691 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224068484|ref|XP_002326131.1| predicted protein [Populus trichocarpa] gi|222833324|gb|EEE71801.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| TAIR|locus:2180399 | 551 | TBL16 "AT5G20680" [Arabidopsis | 0.667 | 0.642 | 0.785 | 1.9e-177 | |
| TAIR|locus:2160796 | 408 | TBL14 "AT5G64020" [Arabidopsis | 0.669 | 0.870 | 0.607 | 3.3e-132 | |
| TAIR|locus:2040696 | 482 | TBL15 "AT2G37720" [Arabidopsis | 0.626 | 0.688 | 0.582 | 2.6e-113 | |
| TAIR|locus:2080389 | 469 | TBL10 "TRICHOME BIREFRINGENCE- | 0.624 | 0.705 | 0.326 | 3.3e-51 | |
| TAIR|locus:2080767 | 427 | TBL8 "AT3G11570" [Arabidopsis | 0.624 | 0.775 | 0.328 | 3.9e-44 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.624 | 0.713 | 0.301 | 6.6e-42 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.620 | 0.692 | 0.303 | 2.2e-41 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.632 | 0.690 | 0.293 | 8.4e-41 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.633 | 0.604 | 0.310 | 1.2e-40 | |
| TAIR|locus:2036631 | 541 | TBL2 "AT1G60790" [Arabidopsis | 0.618 | 0.606 | 0.284 | 1.2e-39 |
| TAIR|locus:2180399 TBL16 "AT5G20680" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1588 (564.1 bits), Expect = 1.9e-177, Sum P(2) = 1.9e-177
Identities = 278/354 (78%), Positives = 314/354 (88%)
Query: 177 KADENSTMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLR 236
+ D ST NQACNYAKGKWVVD+ RPLYSG+ CKQWL+ MWACRLMQRTDFA+E LR
Sbjct: 198 RTDGTSTARITNQACNYAKGKWVVDNHRPLYSGSQCKQWLASMWACRLMQRTDFAFESLR 257
Query: 237 WQPKDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEY 296
WQPKDC MEEFEGS+FL RM+++TLAF+GDSLGRQQFQS+MCM++GGKER DV DVG E+
Sbjct: 258 WQPKDCSMEEFEGSKFLRRMKNKTLAFVGDSLGRQQFQSMMCMISGGKERLDVLDVGPEF 317
Query: 297 GLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLR 356
G + P G RP GWAYRFP TNTT+LY+WS+ LCD++PLNIT+PATE+AMHLDRPPAFLR
Sbjct: 318 GFITPEGGARPGGWAYRFPETNTTVLYHWSSTLCDIEPLNITDPATEHAMHLDRPPAFLR 377
Query: 357 QYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVN 416
QYL K DVLV+NTGHHWNRGKL N+WVMHV G+PNTNRK+A + AKNFTIHS VSWVN
Sbjct: 378 QYLQKIDVLVMNTGHHWNRGKLNGNKWVMHVNGVPNTNRKLAALGNAKNFTIHSTVSWVN 437
Query: 417 SQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVKG 476
SQLP HP LKAFYRS+SPRHFV G+WNTGGSC+NTTPMSIGKEVLQ+ES DYSAG AVKG
Sbjct: 438 SQLPLHPGLKAFYRSLSPRHFVGGEWNTGGSCNNTTPMSIGKEVLQEESSDYSAGRAVKG 497
Query: 477 TGVKLLDITALSQVRDEGHISQYSITASRGVQDCLHWCLPGVPDTWNEILFAQL 530
TGVKLLDITALS +RDEGHIS++SI+ASRGVQDCLHWCLPGVPDTWNEILFA +
Sbjct: 498 TGVKLLDITALSHIRDEGHISRFSISASRGVQDCLHWCLPGVPDTWNEILFAMI 551
|
|
| TAIR|locus:2160796 TBL14 "AT5G64020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040696 TBL15 "AT2G37720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080389 TBL10 "TRICHOME BIREFRINGENCE-LIKE 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080767 TBL8 "AT3G11570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2036631 TBL2 "AT1G60790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| AT5G20680 | unknown protein; unknown protein; INVOLVED IN- biological_process unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF231, plant (InterPro-IPR004253); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G64020.1); Has 994 Blast hits to 929 proteins in 72 species- Archae - 0; Bacteria - 4; Metazoa - 65; Fungi - 20; Plants - 706; Viruses - 7; Other Eukaryotes - 192 (source- NCBI BLink). (551 aa) | |||||||
(Arabidopsis thaliana) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 3e-72 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 9e-49 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 3e-20 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 230 bits (589), Expect = 3e-72
Identities = 98/289 (33%), Positives = 138/289 (47%), Gaps = 27/289 (9%)
Query: 247 FEGSQFLTRMQDRTLAFIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIR 306
F+ QFL R++ + + F+GDSL R Q++SL+C+++ + P + + ++ L
Sbjct: 4 FDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEP-PKGKTLERDGRL-------- 54
Query: 307 PNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPATEYAMHLDRPPAFLRQYLHKFDVLV 366
+ +RF N TI +YWS L + D + + LD + DVLV
Sbjct: 55 ---FRFRFKDYNVTIEFYWSPFLVESD----NAEEGKRVLKLDSIDEKWSKLWPGADVLV 107
Query: 367 LNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEHPRLK 426
N+GH W K+ W N K A + + WV+ LP + +
Sbjct: 108 FNSGHWWLHRKVY-IGWDYCQKS----NYKEMGFLDAYRKALETWAKWVDVNLPPS-KTR 161
Query: 427 AFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQDESGDYSAGSAVK----GTGVKLL 482
F+R+ SP HF G+WNTGGSC T P+ + + T VKLL
Sbjct: 162 VFFRTFSPVHFEGGEWNTGGSCYETEPLLGSEYKGLTPEMIDIVNEVLSRAAMKTPVKLL 221
Query: 483 DITALSQVRDEGHISQYSITAS-RGVQDCLHWCLPGVPDTWNEILFAQL 530
DIT LSQ R +GH S Y + QDCLHWCLPGVPDTWNE+L A L
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKEQDCLHWCLPGVPDTWNELLLALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.58 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-111 Score=877.03 Aligned_cols=326 Identities=31% Similarity=0.621 Sum_probs=267.1
Q ss_pred ccccCCCCCcCccCceeeCCCCCCcCCCCCchhhcccccccccCCCCcccceeeeecCCCCCCccCHHHHHHHHcCCcEE
Q 009629 183 TMLEQNQACNYAKGKWVVDDSRPLYSGAHCKQWLSQMWACRLMQRTDFAYERLRWQPKDCQMEEFEGSQFLTRMQDRTLA 262 (530)
Q Consensus 183 ~~~~~~~~CD~f~G~WV~D~~~PlY~~~tCp~fi~~~~nC~knGRPD~~Yl~WRWQP~~CdLPrFD~~~FLe~LRGKrLa 262 (530)
.+..+.+.||+|+|+||+|+++|||++++||.||+++|||++|||||++|++|||||++|+||||||.+||++|||||||
T Consensus 45 ~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~ 124 (387)
T PLN02629 45 SLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVM 124 (387)
T ss_pred CCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEE
Confidence 45667889999999999999999999999986799999999999999999999999999999999999999999999999
Q ss_pred EEecchhHHHHHHHHHhhcCCCCCCCccccccccceeccCCCcCCCcceEEeccCCEEEEEEecccccccCCCCCCCCCC
Q 009629 263 FIGDSLGRQQFQSLMCMVTGGKERPDVEDVGKEYGLVKPRGAIRPNGWAYRFPSTNTTILYYWSACLCDLDPLNITNPAT 342 (530)
Q Consensus 263 FVGDSLaRNQ~eSLlCLL~~~~~~~~v~~~~~~~~~~~~~g~~r~~~~~~~F~~yN~TV~fyWSPFLV~~~~~~~~~~~~ 342 (530)
||||||+|||||||+|||+++++.... . +..++. ..+|+|++||+||+||||||||+.++.+ .
T Consensus 125 FVGDSL~RNQ~eSLvClL~~~~p~~~~-------~-~~~~~~----~~~~~F~~yN~TV~~ywspfLV~~~~~~-----~ 187 (387)
T PLN02629 125 FVGDSLGRNQWESLICLISSSVPSTRT-------Q-MSRGDP----LSTFKFLDYGVSISFYKAPYLVDIDAVQ-----G 187 (387)
T ss_pred EeccccchhHHHHHHHHhhccCCCCce-------e-eecCCc----eEEEEeccCCEEEEEEecceEEeeecCC-----C
Confidence 999999999999999999998764321 1 111222 2479999999999999999999975422 2
Q ss_pred ccceeeCCCchhhhhccCcccEEEEcCcccccCCcccCCeeeEEeCCccCCCcchhhhhhHHHHHHHHHHHHHHhhCCCC
Q 009629 343 EYAMHLDRPPAFLRQYLHKFDVLVLNTGHHWNRGKLKANRWVMHVGGMPNTNRKIADIAGAKNFTIHSIVSWVNSQLPEH 422 (530)
Q Consensus 343 ~~~L~LD~~d~~w~~~~~~~DVLVfNTGhWW~r~~~~~~~~~~~~gg~~~~~~~~~~~~~ay~~al~Tw~~wV~~~l~~~ 422 (530)
...||||+++.. ++.|+++|||||||||||.+++.. .+|.+++.|.... ..+++..||++||+||++||++++++
T Consensus 188 ~~~l~LD~id~~-a~~w~~~DvlVfntghWw~~~~~~-~~~~~~~~g~~~~--~~~~~~~A~r~al~T~~~wv~~~~~~- 262 (387)
T PLN02629 188 KRVLKLEEISGN-ANAWRDADVLIFNTGHWWSHQGSL-QGWDYIESGGTYY--QDMDRLVALEKALRTWAYWVDTNVDR- 262 (387)
T ss_pred ceeEEecCcchh-hhhhccCCEEEEeCccccCCCCee-EEeeeeccCCccc--cCccHHHHHHHHHHHHHHHHHhcCCC-
Confidence 457999999874 788999999999999999987643 3454444333221 23456789999999999999999987
Q ss_pred CCceEEEEeccCCCcCCCCCCCCC-----CCC-ccccCCCCccccccCcchhhhhhccc--CCceEEeecccccccccCC
Q 009629 423 PRLKAFYRSISPRHFVNGDWNTGG-----SCD-NTTPMSIGKEVLQDESGDYSAGSAVK--GTGVKLLDITALSQVRDEG 494 (530)
Q Consensus 423 ~~t~VFfRT~SP~Hfe~geWn~GG-----~C~-~T~Pi~~ge~~~~~~~~~~v~~~a~~--~~~v~LLDIT~LS~lR~Dg 494 (530)
.+++|||||+||+||+||+||+|| +|+ +|+|+..+++.........+++++++ +.+|+|||||+||+|||||
T Consensus 263 ~kt~vffrT~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~Dg 342 (387)
T PLN02629 263 SRTRVFFQSISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDG 342 (387)
T ss_pred CCcEEEEEecCcccccCCCcCCCCCCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCC
Confidence 478899999999999999999875 586 58999754432111111223444432 4689999999999999999
Q ss_pred CCcccccCC-------CCCCCCcccccCCChhhHHHHHHHHhC
Q 009629 495 HISQYSITA-------SRGVQDCLHWCLPGVPDTWNEILFAQL 530 (530)
Q Consensus 495 HPs~Y~~~~-------~~~~~DClHWCLPGvpDtWNeLLy~~L 530 (530)
|||+|+... +..++||+||||||||||||||||++|
T Consensus 343 HPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L 385 (387)
T PLN02629 343 HPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTAL 385 (387)
T ss_pred CcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHH
Confidence 999996431 235689999999999999999999986
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 1e-06
Identities = 67/486 (13%), Positives = 133/486 (27%), Gaps = 157/486 (32%)
Query: 48 WLSSDAFTNSVSPESQIHMNKDISTSAENKTVNYQEGQLSNILAPAGPVAETIPAKR--- 104
WL+ N SPE+ + M + + + N+ + + + R
Sbjct: 186 WLN---LKNCNSPETVLEMLQKLLYQIDP---NWTS-RSDHSSNIKLRIHSIQAELRRLL 238
Query: 105 --KENTESL---AEGQAKDKHVVEAEKNSSAENSTILTKTKENGKKNLGEKNSKLEKESV 159
K L ++ A + IL T+
Sbjct: 239 KSKPYENCLLVLLN--VQNAKAWNAFNL----SCKILLTTRF------------------ 274
Query: 160 DRRSSADSANLSSSERIKADENSTMLEQNQACNYAKGKWV---VDDSRPLYSGAHCKQWL 216
+ D + +++ I D +S L ++ + K++ D + + L
Sbjct: 275 --KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTN-PRRL 330
Query: 217 SQMWACRLMQRTDFAYERLRWQP-KDCQMEEFEGSQFLTRMQDRTLAFIGDSLGRQQFQS 275
S + R A W K ++ LT + + +L + + R+ F
Sbjct: 331 SIIAE---SIRDGLA----TWDNWKHVNCDK------LTTIIESSLNVLEPAEYRKMFDR 377
Query: 276 L-------------MCMVTGGKERPDVEDVGKE---YGLVKPRGAIRPNGWAYRFPSTNT 319
L + ++ + DV V + Y LV+ +P PS
Sbjct: 378 LSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE----KQPKESTISIPS--- 430
Query: 320 TILYYWSACLCDLDPLNITNPATEYAMH---LDR------------PPAFLRQYLHKFDV 364
+Y + EYA+H +D P +L QY +
Sbjct: 431 --IYLELKVKLE----------NEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSH-- 476
Query: 365 LVLNTGHH---------------------WNRGKLKANRWVMH-VGGMPNTNRKIADIAG 402
GHH + K++ + + G + NT + +
Sbjct: 477 ----IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT---LQQLKF 529
Query: 403 AKNFTIHSIVSWVNSQLPEHPRLKAFYRSISPRHFVNGDWNTGGSCDNTTPMSIGKEVLQ 462
K + I P+ + +I F+ + + + + L
Sbjct: 530 YKPY----IC-------DNDPKYERLVNAI--LDFLP---KIEENLICSKYTDLLRIALM 573
Query: 463 DESGDY 468
E
Sbjct: 574 AEDEAI 579
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 80.97 |
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein BT2961 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=80.97 E-value=0.25 Score=41.60 Aligned_cols=14 Identities=36% Similarity=0.760 Sum_probs=12.6
Q ss_pred cCCcEEEEecchhH
Q 009629 257 QDRTLAFIGDSLGR 270 (530)
Q Consensus 257 RGKrLaFVGDSLaR 270 (530)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 68999999999884
|