Citrus Sinensis ID: 009637
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SFU3 | 532 | Purple acid phosphatase 1 | yes | no | 0.884 | 0.881 | 0.760 | 0.0 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.826 | 0.956 | 0.594 | 1e-155 | |
| O48840 | 545 | Purple acid phosphatase 1 | no | no | 0.909 | 0.884 | 0.553 | 1e-152 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.647 | 0.790 | 0.383 | 1e-73 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.649 | 0.787 | 0.370 | 5e-71 | |
| Q9LJU7 | 437 | Purple acid phosphatase 1 | no | no | 0.647 | 0.784 | 0.379 | 1e-69 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.647 | 0.803 | 0.374 | 3e-67 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.694 | 0.786 | 0.339 | 2e-58 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.562 | 0.640 | 0.375 | 4e-58 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.562 | 0.642 | 0.378 | 8e-57 |
| >sp|Q9SFU3|PPA15_ARATH Purple acid phosphatase 15 OS=Arabidopsis thaliana GN=PAP15 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/472 (76%), Positives = 410/472 (86%), Gaps = 3/472 (0%)
Query: 33 NIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWI 92
+IPSTLDGPF P TVP D SLRG A+D+PDTDP VRRRV GFEPEQ+S+SLS +HDSIW+
Sbjct: 21 SIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSIWV 80
Query: 93 TWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152
+WITGEFQIG +KPLDP ++ S V++GT R +L+HEA GHSLVY QLYPF+GL NYTSG
Sbjct: 81 SWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYTSG 140
Query: 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
IIHHVR+TGL+P+ YYY+CGDPS AMS +++FRT+P S P SYP RIA+VGDLGLTYN
Sbjct: 141 IIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYN 200
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272
TT TI+H+ N PDL+LL+GDV+YANLYLTNGT SDCYSCSF +TPIHETYQPRWDYWGR
Sbjct: 201 TTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYWGR 260
Query: 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 332
FM+NL SKVP+MV+EGNHEIE QA N+TF AYSSRFAFP ESGS S+ YYSFNAGGIHF
Sbjct: 261 FMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHF 320
Query: 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392
+MLGAYI+YDKS QY+WL+KDLA VDRSVTPWLVA+WHPPWYSSY++HYREAECM+ M
Sbjct: 321 VMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAM 380
Query: 393 EALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGN 452
E LLYSYG DIVFNGHVHAYERSNRV+NY LDPCGPV+I IGDGGN EKM+I HAD+PG
Sbjct: 381 EELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGK 440
Query: 453 CPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
CPEP +TPDP MGGFCA NFT + KFCWDRQPDYSA RESSFGHGILE+
Sbjct: 441 CPEPLTTPDPVMGGFCAWNFT---PSDKFCWDRQPDYSALRESSFGHGILEM 489
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Acid phosphatase activity with p-nitrophenyl phosphate (pNPP), D-myoinositol 1-phosphate (Ins(1)P1), phytic acid and Myo-inositol hexakisphosphate. Low or no activity with Glc-6-P and ATP. Confers shoot growth stimulation, enhanced salt and osmotic stress tolerance, and ABA insensitivity. May modulate ascorbic acid (AsA) levels by controlling the input of myoinositol into this branch of AsA biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 549 bits (1414), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/441 (59%), Positives = 328/441 (74%), Gaps = 3/441 (0%)
Query: 15 FLFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRR-VTG 73
L I L S + A IP+TLDGPF+P T ++ SLR + D+P P +R+R V+
Sbjct: 3 LLIMITLTSISLLLAAAETIPTTLDGPFKPLTRRFEPSLRRGSDDLPMDHPRLRKRNVSS 62
Query: 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133
PEQ++++LS S+W++W+TG+ +G ++KPLDP ++AS V YG + N + G+
Sbjct: 63 DFPEQIALALS-TPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGN 121
Query: 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193
+ VY QLYP +GL NYTSGIIHHV + GLEP +YYY+CGD S+PAMS+ F TLP
Sbjct: 122 ATVYSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPS 181
Query: 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLT-NGTGSDCYSC 252
+YP RIA VGDLGLT NTT TI+H+ N+P LV++VGD+TYAN Y T G G C+SC
Sbjct: 182 KDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSC 241
Query: 253 SFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS 312
SF PI ETYQPRWD WGRFM+ L SKVP MV+EGNHEIE QA TF +YS RFA P+
Sbjct: 242 SFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGITFKSYSERFAVPA 301
Query: 313 EESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372
ESGS S+ YYSF+AGG+HF+MLGAY+ Y+ +G QY WL++DL+ VDR+VTPWLVAT HP
Sbjct: 302 SESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMHP 361
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHIT 432
PWY+SYSSHY+E ECMR EME LLY Y VDIVF GHVHAYER NR++NYTLDPCGPV+IT
Sbjct: 362 PWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYIT 421
Query: 433 IGDGGNLEKMSITHADEPGNC 453
IGDGGN+EK+ + AD+PG C
Sbjct: 422 IGDGGNIEKVDVDFADDPGKC 442
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Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O48840|PPA13_ARATH Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 279/504 (55%), Positives = 337/504 (66%), Gaps = 22/504 (4%)
Query: 17 FFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE- 75
FF+ S + I PSTLDGP P T P D +L A D+P++DP + ++ F
Sbjct: 11 FFVIFASTVTIIV--HGFPSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLL 68
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGD-NIKPLDPKTVASFVRYGT--SRTNLNHEATG 132
PEQ+SVSLS++ DS+WI+W+TGE+QIG+ + PLDP V S V+Y R ATG
Sbjct: 69 PEQISVSLSYSFDSVWISWVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATG 128
Query: 133 HSLVYDQLYPFE-GLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPA 191
HS+VY+Q Y E G NYTSGIIHHV+LTGL+PN Y YQCGDPS+ AMS YYFRT+P
Sbjct: 129 HSIVYNQQYSSENGFMNYTSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPK 188
Query: 192 SGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 251
S ++YP RI + GDLGLTYNT+ + H+ SN PDLV+L+G +YA+ YL N T DC S
Sbjct: 189 STSENYPHRIVVAGDLGLTYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSS 248
Query: 252 CSFSKTPIH----------ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-T 300
C + ETYQPRWDYWGRFM+ L + VP M+V G HEIE Q N T
Sbjct: 249 CHCDQNGTSSDCGSCYSSGETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLT 308
Query: 301 FVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDR 360
F AYSSRFAFPS ESGS S YYSFNAGG HFI+L +Y YD S QY WLE DL ++R
Sbjct: 309 FAAYSSRFAFPSNESGSFSPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINR 368
Query: 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420
S TPW+VATW PWYS++ HYREAE MR+ +E LLY+Y VDIVFN HV AYERSNRV+N
Sbjct: 369 SETPWVVATWSLPWYSTFKGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYN 428
Query: 421 YTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 480
YTLD CGPV+IT G GG K+ H D+PGN P+PS Y N T P +
Sbjct: 429 YTLDQCGPVYITTGAGG-AGKLETQHVDDPGNIPDPSQN---YSCRSSGLNSTLEPVKDE 484
Query: 481 FCWDRQPDYSAFRESSFGHGILEV 504
C +QP+YSA+RESSFG GILEV
Sbjct: 485 TCPVKQPEYSAYRESSFGFGILEV 508
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 278 bits (710), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/433 (38%), Positives = 229/433 (52%), Gaps = 90/433 (20%)
Query: 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHS 134
+P+Q+ +SL+ D + +T+IT + V S V YG + +ATG
Sbjct: 46 DPQQVHISLA-GKDHMRVTFIT------------EDNKVESVVEYGKQPGKYDGKATGEC 92
Query: 135 LVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGP 194
Y + Y SG IHHV++ L+ N YYY+CG P S F+T P++
Sbjct: 93 TSYKYFF-------YKSGKIHHVKIGPLQANTTYYYRCGGNG-PEFS----FKTPPST-- 138
Query: 195 QSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSF 254
+P AIVGDLG T T T++H++S + D+ LL GD++YA
Sbjct: 139 --FPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYA----------------- 179
Query: 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFPS 312
+T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P
Sbjct: 180 ------DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPH 233
Query: 313 EESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372
ES S S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V H
Sbjct: 234 TESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHA 293
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHIT 432
PWY++ +H E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HIT
Sbjct: 294 PWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHIT 353
Query: 433 IGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAF 492
IGDGGN E ++++ P E F
Sbjct: 354 IGDGGNREGLALSFKKPPSPLSE------------------------------------F 377
Query: 493 RESSFGHGILEVL 505
RESSFGHG L+V+
Sbjct: 378 RESSFGHGRLKVM 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 221/434 (50%), Gaps = 90/434 (20%)
Query: 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133
F P+Q+ +SL+ D + +T+ T D VAS V YG + + G
Sbjct: 49 FYPQQVHISLA-GKDHMRVTYTT------------DDLNVASMVEYGKHPKKYDKKTAGE 95
Query: 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193
S Y + Y SG IHHV++ L+PN KYYY+CG D + F+T P+
Sbjct: 96 STSYTYFF-------YNSGKIHHVKIGPLKPNTKYYYRCG-----GHGDEFSFKTPPSK- 142
Query: 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
+P A+ GDLG T T T++ + + D+ LL GD++YA
Sbjct: 143 ---FPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYA---------------- 183
Query: 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFP 311
+T+QP WD +GR ++ L S P MV EGNHEIE+ N +F +Y++R+ P
Sbjct: 184 -------DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMP 236
Query: 312 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWH 371
ES S S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VDR TPWLV H
Sbjct: 237 HAESLSHSNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMH 296
Query: 372 PPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
PWYS+ +HY E E MR +E+LLY VD+VF GHVH YER ++N DPCGP++I
Sbjct: 297 TPWYSTNKAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYI 356
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGN E +++ +F + P S
Sbjct: 357 TIGDGGNREGLAL-----------------------------------RFKKPQSP-LSE 380
Query: 492 FRESSFGHGILEVL 505
FRESSFGHG L ++
Sbjct: 381 FRESSFGHGRLRII 394
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/432 (37%), Positives = 225/432 (52%), Gaps = 89/432 (20%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+ +SL+ + + +TW+T + K+ SFV YGTS ++ G S
Sbjct: 47 PEQVHISLAGD-KHMRVTWVTND------------KSSPSFVEYGTSPGKYSYLGQGEST 93
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y + Y SG IHH + LE + YYY+CG ++ +T PA
Sbjct: 94 SYSYIM-------YRSGKIHHTVIGPLEADTVYYYRCG-----GEGPEFHLKTPPAQ--- 138
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P A+ GDLG T T T++H+ + + LL GD++YA+
Sbjct: 139 -FPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYM--------------- 182
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEE 314
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P EE
Sbjct: 183 --------QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEE 234
Query: 315 SGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 374
SGS S+ YYSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+ +H PW
Sbjct: 235 SGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPW 294
Query: 375 YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
Y+S ++H E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHITIG
Sbjct: 295 YNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIG 354
Query: 435 DGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRE 494
DGGN E ++ + D PS P++S FRE
Sbjct: 355 DGGNREGLARKYKD-------PS-----------------------------PEWSVFRE 378
Query: 495 SSFGHGILEVLS 506
+SFGHG L++++
Sbjct: 379 ASFGHGELQMVN 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 218/433 (50%), Gaps = 90/433 (20%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
P+Q+ +SL D + I+WIT +++ V YGT A G S
Sbjct: 44 PDQVHISL-VGPDKMRISWIT-------------QSSISPSVVYGTVSGKYEGSANGTSS 89
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y L Y SG I+ V + L+PN YYY+CG PS + + FRT P+
Sbjct: 90 SYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPS---STQEFSFRTPPSK--- 137
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P + A+ GDLG + + T+ H+S + D+ +L GD++YAN+Y
Sbjct: 138 -FPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMY--------------- 181
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ--AGNQTFVAYSSRFAFPSE 313
QP WD +GR +Q L S+ P MV GNHE+E + F AY+ R+ P E
Sbjct: 182 --------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFE 233
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPP 373
ESGS S+ YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA H P
Sbjct: 234 ESGSSSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293
Query: 374 WYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
WY+S +H E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I
Sbjct: 294 WYNSNEAHQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYI 353
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
IGDGGNLE ++ + D P+ S
Sbjct: 354 NIGDGGNLEGLATKYRDP------------------------------------NPEISL 377
Query: 492 FRESSFGHGILEV 504
FRE+SFGHG L V
Sbjct: 378 FREASFGHGQLVV 390
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/465 (33%), Positives = 218/465 (46%), Gaps = 97/465 (20%)
Query: 58 VDIPDTDPLVRRRVTGFE-PEQLSVSL-SFNHDSIWITWITGEFQIGDNIKPLDPKTVAS 115
VD+P D V R G+ P+Q+ ++ ++ ++W+T E + G N
Sbjct: 41 VDMP-LDSDVFRVPCGYNAPQQVHITQGDVEGKAVIVSWVTQEAK-GSNK---------- 88
Query: 116 FVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDP 175
V Y + H+A G + Y NYTSG IHH + LE + KYYY G
Sbjct: 89 -VIYWKENSTKKHKAHGKTNTYK-------FYNYTSGFIHHCPIRNLEYDTKYYYVLG-- 138
Query: 176 SIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGD 233
+ ++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD
Sbjct: 139 -VGQTERKFWFFTPPEIGPDV-PYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGD 196
Query: 234 VTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293
++YA+ Y P H+ RWD WGRF + + P + GNHE++
Sbjct: 197 ISYADTY-----------------PDHD--NRRWDSWGRFAERSTAYQPWIWTTGNHELD 237
Query: 294 AQ---AGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKW 350
N+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+W
Sbjct: 238 FAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQW 297
Query: 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
LE++ V+R+ TPWL+ H PWY+SY HY E E MRV EA Y VD+VF GHVH
Sbjct: 298 LEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVH 357
Query: 411 AYERSNRVFNYTL-----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSST 459
AYERS RV N D PV+ITIGDGGN+E ++ T EP
Sbjct: 358 AYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP--------- 407
Query: 460 PDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
QP YSAFRE+SFGH I +
Sbjct: 408 --------------------------QPKYSAFREASFGHAIFSI 426
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (576), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 188/373 (50%), Gaps = 75/373 (20%)
Query: 148 NYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDL 207
NYTSG IHH + LE N KYYY+ G I + ++F T P GP P ++GDL
Sbjct: 110 NYTSGYIHHCTIRNLEYNTKYYYEVG---IGNTTRSFWFTTPPEVGPDV-PYTFGLIGDL 165
Query: 208 GLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265
G ++++ T+ H N + VL VGD++YA+ Y P H+
Sbjct: 166 GQSFDSNRTLTHYERNPIKGQAVLFVGDLSYADNY-----------------PNHDNV-- 206
Query: 266 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ---AGNQTFVAYSSRFAFPSEESGSLSSFY 322
RWD WGRF++ + P + GNHEI+ + F ++ R+ P + SGS +F+
Sbjct: 207 RWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPFTKRYHVPYKASGSTETFW 266
Query: 323 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 382
Y + I+L +Y +Y K QYKWLE++L V+R+ TPWL+ H PWY+SY+ HY
Sbjct: 267 YPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHY 326
Query: 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLD-----------PCGPVHI 431
E E MRV E + VD+VF GHVHAYERS RV N D PV+I
Sbjct: 327 MEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYDIVNGKCTPVRDQSAPVYI 386
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGNLE + ATN T D QP+YSA
Sbjct: 387 TIGDGGNLEGL--------------------------ATNMT----------DPQPEYSA 410
Query: 492 FRESSFGHGILEV 504
FRE+SFGH L++
Sbjct: 411 FREASFGHATLDI 423
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 221 bits (564), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 185/373 (49%), Gaps = 75/373 (20%)
Query: 148 NYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDL 207
NY+SG IHH + LE KYYY+ G + + ++F T P GP P ++GDL
Sbjct: 108 NYSSGFIHHTTIRNLEYKTKYYYEVG---LGNTTRQFWFVTPPEIGPDV-PYTFGLIGDL 163
Query: 208 GLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265
G ++++ T++H N + VL VGD++YA+ Y P H+
Sbjct: 164 GQSFDSNKTLSHYELNPRKGQTVLFVGDLSYADNY-----------------PNHDNI-- 204
Query: 266 RWDYWGRFMQNLVSKVPIMVVEGNHE--IEAQAGNQT-FVAYSSRFAFPSEESGSLSSFY 322
RWD WGRF + V+ P + GNHE + G F Y+ R+ P + S S S F+
Sbjct: 205 RWDSWGRFTERSVAYQPWIWTAGNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFW 264
Query: 323 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 382
YS H I+L +Y +Y K QYKWLEK+L V+R+ TPWL+ H PWY+SY+ HY
Sbjct: 265 YSIKRASAHIIVLASYSAYGKYTPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHY 324
Query: 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-----------DPCGPVHI 431
E E MRV E Y VD+VF GHVHAYERS RV N D PV+I
Sbjct: 325 MEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYI 384
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGG LE + ATN T + QP YSA
Sbjct: 385 TIGDGGTLEGL--------------------------ATNMT----------EPQPKYSA 408
Query: 492 FRESSFGHGILEV 504
FRE+SFGH I ++
Sbjct: 409 FREASFGHAIFDI 421
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| 356569147 | 582 | PREDICTED: purple acid phosphatase 15-li | 0.926 | 0.843 | 0.787 | 0.0 | |
| 255554090 | 566 | acid phosphatase, putative [Ricinus comm | 0.922 | 0.863 | 0.777 | 0.0 | |
| 224141249 | 542 | predicted protein [Populus trichocarpa] | 0.920 | 0.900 | 0.782 | 0.0 | |
| 147798298 | 540 | hypothetical protein VITISV_037278 [Viti | 0.922 | 0.905 | 0.773 | 0.0 | |
| 225469592 | 540 | PREDICTED: purple acid phosphatase 15 [V | 0.922 | 0.905 | 0.773 | 0.0 | |
| 351722194 | 547 | phytase precursor [Glycine max] gi|13925 | 0.894 | 0.866 | 0.803 | 0.0 | |
| 357462711 | 543 | Purple acid phosphatase [Medicago trunca | 0.894 | 0.872 | 0.801 | 0.0 | |
| 62177683 | 543 | phytase [Medicago truncatula] | 0.894 | 0.872 | 0.801 | 0.0 | |
| 357462713 | 693 | Purple acid phosphatase [Medicago trunca | 0.896 | 0.685 | 0.787 | 0.0 | |
| 304421388 | 547 | phytase [Glycine max] | 0.894 | 0.866 | 0.801 | 0.0 |
| >gi|356569147|ref|XP_003552767.1| PREDICTED: purple acid phosphatase 15-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/494 (78%), Positives = 438/494 (88%), Gaps = 3/494 (0%)
Query: 11 MGGIFLFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRR 70
MG + + +F LS + + + +P+TLDGPF+P TVP D S RGNAVD+ DTDPLV+R
Sbjct: 1 MGWVIVCMLFSLSCVIV---DGGVPTTLDGPFKPVTVPLDQSFRGNAVDLTDTDPLVQRT 57
Query: 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEA 130
V GF+PEQ+S+SLS +HDS+WI+WITGEFQIGDNI+PLDP+TVAS V+YG ++ H+A
Sbjct: 58 VEGFQPEQISLSLSASHDSVWISWITGEFQIGDNIEPLDPETVASIVQYGRFGRSMRHQA 117
Query: 131 TGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190
TG+SLVY QLYPFEGLQNYTSGIIHHVRLTGL PN Y Y+CGDPS+ MSDV+YFRT+P
Sbjct: 118 TGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRPNTLYQYKCGDPSLSGMSDVHYFRTMP 177
Query: 191 ASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCY 250
ASGP+SYP RIA+VGDLGLTYNTT T+NHM+SN PDL+LLVGDV+ ANLYLTNGTG+DCY
Sbjct: 178 ASGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSCANLYLTNGTGADCY 237
Query: 251 SCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF 310
SCSF TPIHETYQPRWDYWGR+MQ L+S VPIMV+EGNHEIE QA NQTFVAYSSRFAF
Sbjct: 238 SCSFPNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQTFVAYSSRFAF 297
Query: 311 PSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATW 370
PSEESGS S+FYYSFNAGGIHFIMLGAYISYDKSG QYKWLE+DLA+VDR VTPWL+ATW
Sbjct: 298 PSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLIATW 357
Query: 371 HPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430
H PWYS+Y +HYREAECMRVEME LLY YGVDIVFNGHVHAYERSNRV+NYTLDPCGPV+
Sbjct: 358 HAPWYSTYKAHYREAECMRVEMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVY 417
Query: 431 ITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYS 490
IT+GDGGN EKM+ITHADEPG CPEPS+TPD YMGGFCA NFTSGPA G FCWDRQPDYS
Sbjct: 418 ITVGDGGNREKMAITHADEPGQCPEPSTTPDDYMGGFCAFNFTSGPAEGNFCWDRQPDYS 477
Query: 491 AFRESSFGHGILEV 504
AFRESSFGHGILEV
Sbjct: 478 AFRESSFGHGILEV 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554090|ref|XP_002518085.1| acid phosphatase, putative [Ricinus communis] gi|223542681|gb|EEF44218.1| acid phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/489 (77%), Positives = 437/489 (89%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L F LLS + A + +IP+TL+GPF+P TVP D S RG+A+D+PD+DP V+R V FE
Sbjct: 32 LSFYVLLSSATLAAAHGHIPTTLEGPFKPRTVPLDQSFRGHAIDLPDSDPRVQRTVRDFE 91
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SVSLS HDS+WI+WITG++QIGDNIKPL+P AS V YG S L H+ATG+SL
Sbjct: 92 PEQISVSLSSTHDSVWISWITGDYQIGDNIKPLNPSATASVVLYGRSIFPLTHQATGYSL 151
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGL+NYTSG+IHHVRLTGL+PN Y+YQCGDPSIPAMSD+Y+FRT+PASGP+
Sbjct: 152 VYNQLYPFEGLKNYTSGVIHHVRLTGLKPNTTYFYQCGDPSIPAMSDIYHFRTMPASGPK 211
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
S+P +IAIVGDLGLTYNTT T++H+ SN PDL+LLVGD TYANLYLTNGTG+DCY C+F
Sbjct: 212 SFPGKIAIVGDLGLTYNTTSTVDHLISNNPDLILLVGDATYANLYLTNGTGADCYKCAFP 271
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGR+MQ L+S++PIMVVEGNHEIE QA NQTF AYSSRFAFPS+ES
Sbjct: 272 QTPIHETYQPRWDYWGRYMQPLISRIPIMVVEGNHEIEQQAQNQTFAAYSSRFAFPSKES 331
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHF+MLGAYISY+KSG QYKWLE+DLANVDR VTPWLVATWHPPWY
Sbjct: 332 GSPSTFYYSFNAGGIHFVMLGAYISYNKSGDQYKWLERDLANVDREVTPWLVATWHPPWY 391
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
++Y +HYREAECMRV ME LLY YGVD+VFNGHVHAYERSNRV+NYTLDPCGPVHIT+GD
Sbjct: 392 NTYKAHYREAECMRVAMEELLYKYGVDMVFNGHVHAYERSNRVYNYTLDPCGPVHITVGD 451
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+ITHADEPGNCP+PS+TPD +MGGFCA NFTSGPAAGKFCWDRQPDYSA+RES
Sbjct: 452 GGNREKMAITHADEPGNCPDPSTTPDEFMGGFCAFNFTSGPAAGKFCWDRQPDYSAYRES 511
Query: 496 SFGHGILEV 504
SFGHGILEV
Sbjct: 512 SFGHGILEV 520
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224141249|ref|XP_002323987.1| predicted protein [Populus trichocarpa] gi|222866989|gb|EEF04120.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/488 (78%), Positives = 428/488 (87%)
Query: 17 FFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEP 76
F + +S + IP+TLDGPF+P TVP D + RG+AVD+PDTDP V+R V GFEP
Sbjct: 11 FCVLSISLIGTDNIVVGIPTTLDGPFKPVTVPLDKTFRGHAVDLPDTDPRVQRVVQGFEP 70
Query: 77 EQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLV 136
EQ+SVSLS HDS+WI+WITG+FQIGD IKPL+PKTVAS VRYG R L H+ATG+SLV
Sbjct: 71 EQISVSLSTTHDSVWISWITGDFQIGDRIKPLNPKTVASVVRYGRLRIPLIHKATGYSLV 130
Query: 137 YDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQS 196
Y+QLYPF GLQNYTSGIIHHVRLTGL+PN Y+YQCGDPSIPAMS YYF+T+PASGP+S
Sbjct: 131 YNQLYPFVGLQNYTSGIIHHVRLTGLKPNTLYHYQCGDPSIPAMSSKYYFKTMPASGPKS 190
Query: 197 YPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
YP RIAIVGDLGLTYNTT T++H+ N PDL+LLVGDV YANLYLTNGTG+DCYSCSFS+
Sbjct: 191 YPSRIAIVGDLGLTYNTTSTVDHVIGNNPDLILLVGDVCYANLYLTNGTGADCYSCSFSQ 250
Query: 257 TPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG 316
TPIHETYQPRWDYWGR+MQ + SK+PIMVVEGNHEIE Q NQTFVAYSSRFAFPS+ESG
Sbjct: 251 TPIHETYQPRWDYWGRYMQPVTSKIPIMVVEGNHEIEKQVENQTFVAYSSRFAFPSKESG 310
Query: 317 SLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYS 376
S S+FYYSFNAGGIHFIMLG YI+Y+KS HQYKWL+KDLA VDR VTPWLVATWHPPWYS
Sbjct: 311 SSSTFYYSFNAGGIHFIMLGGYIAYNKSAHQYKWLKKDLAKVDRKVTPWLVATWHPPWYS 370
Query: 377 SYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436
+Y +HYREAECMR ME LLY YGVDI+FNGH+HAYERSNRV+NYTLDPCGPVHIT+GDG
Sbjct: 371 TYKAHYREAECMRTAMEDLLYQYGVDIIFNGHIHAYERSNRVYNYTLDPCGPVHITVGDG 430
Query: 437 GNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESS 496
GN EKM+I HADEP NCP+PS+TPD YMGGFCA NFTSGPAAGKFCWDRQPDYSA+RESS
Sbjct: 431 GNREKMAIAHADEPRNCPDPSTTPDEYMGGFCAFNFTSGPAAGKFCWDRQPDYSAYRESS 490
Query: 497 FGHGILEV 504
FGHGI EV
Sbjct: 491 FGHGIFEV 498
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147798298|emb|CAN65638.1| hypothetical protein VITISV_037278 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/489 (77%), Positives = 432/489 (88%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L + ++ ++ A +A IP+TLDGPF P TVP+D SLRG AVD+PDTDP VRRRV GFE
Sbjct: 5 LCCVIVVILVNFAAIHARIPTTLDGPFXPVTVPFDQSLRGKAVDLPDTDPRVRRRVKGFE 64
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SV+LS + DS+WI+WITGEFQIG NIKPL+PKTV+S VRYGT R L + G+SL
Sbjct: 65 PEQISVALSASFDSVWISWITGEFQIGYNIKPLNPKTVSSVVRYGTLRYPLRRKVMGYSL 124
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGLQNYTSGIIHHVRL GL+P+ +YYY+CGDP+I AMS++Y FRT+P SGP+
Sbjct: 125 VYNQLYPFEGLQNYTSGIIHHVRLAGLKPSTRYYYRCGDPTIGAMSNIYSFRTMPVSGPR 184
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
SYP++I I+GDLGLTYN+T TI+H+ SN+PDLVLLVGDVTYAN YLTNGTGSDCYSCSF
Sbjct: 185 SYPRKIGIIGDLGLTYNSTATIDHLISNKPDLVLLVGDVTYANQYLTNGTGSDCYSCSFP 244
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGRFMQNLVSKVP+MV+EGNHEIE QA + FVAYSSRFAFPS+ES
Sbjct: 245 QTPIHETYQPRWDYWGRFMQNLVSKVPMMVIEGNHEIEEQAEKKNFVAYSSRFAFPSKES 304
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHFIMLGAY +Y+KS QYKWLE+DLA VDRS+TPWL+A WHPPWY
Sbjct: 305 GSASTFYYSFNAGGIHFIMLGAYAAYNKSADQYKWLERDLAKVDRSITPWLIAAWHPPWY 364
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
SSY +HYRE ECMR EME LLYSYGVDIVFNGHVHAYERSNRV+NYTLDPCGPVHI +GD
Sbjct: 365 SSYKAHYREVECMRQEMEELLYSYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIMVGD 424
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+I HAD PG CPEPS+TPD ++GGFCATNFT GPAAGKFCWDRQPD+SAFRES
Sbjct: 425 GGNREKMAIEHADAPGKCPEPSTTPDTFIGGFCATNFTFGPAAGKFCWDRQPDFSAFRES 484
Query: 496 SFGHGILEV 504
SFGHGILEV
Sbjct: 485 SFGHGILEV 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225469592|ref|XP_002272478.1| PREDICTED: purple acid phosphatase 15 [Vitis vinifera] gi|296088799|emb|CBI38249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/489 (77%), Positives = 432/489 (88%)
Query: 16 LFFIFLLSPLDIRATNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE 75
L + ++ ++ A +A IP+TLDGPF P TVP+D SLRG AVD+PDTDP VRRRV GFE
Sbjct: 5 LCCVIVVILVNFAAIHARIPTTLDGPFTPVTVPFDQSLRGKAVDLPDTDPRVRRRVKGFE 64
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
PEQ+SV+LS + DS+WI+WITGEFQIG NIKPL+PKTV+S VRYGT R L + G+SL
Sbjct: 65 PEQISVALSASFDSVWISWITGEFQIGYNIKPLNPKTVSSVVRYGTLRYPLRRKVMGYSL 124
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
VY+QLYPFEGLQNYTSGIIHHVRL GL+P+ +YYY+CGDP+I AMS++Y FRT+P SGP+
Sbjct: 125 VYNQLYPFEGLQNYTSGIIHHVRLAGLKPSTRYYYRCGDPTIGAMSNIYSFRTMPVSGPR 184
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
SYP++I I+GDLGLTYN+T TI+H+ SN+PDLVLLVGDVTYAN YLTNGTGSDCYSCSF
Sbjct: 185 SYPRKIGIIGDLGLTYNSTATIDHLISNKPDLVLLVGDVTYANQYLTNGTGSDCYSCSFP 244
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
+TPIHETYQPRWDYWGRFMQNLVSKVP+MV+EGNHEIE QA + FVAYSSRFAFPS+ES
Sbjct: 245 QTPIHETYQPRWDYWGRFMQNLVSKVPMMVIEGNHEIEEQAEKKNFVAYSSRFAFPSKES 304
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
GS S+FYYSFNAGGIHFIMLGAY +Y+KS QYKWLE+DLA VDRS+TPWL+A WHPPWY
Sbjct: 305 GSASTFYYSFNAGGIHFIMLGAYAAYNKSADQYKWLERDLAKVDRSITPWLIAAWHPPWY 364
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435
SSY +HYRE ECMR EME LLYSYGVDIVFNGHVHAYERSNRV+NYTLDPCGPVHI +GD
Sbjct: 365 SSYKAHYREVECMRQEMEELLYSYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVHIMVGD 424
Query: 436 GGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495
GGN EKM+I HAD PG CPEPS+TPD ++GGFCATNFT GPAAGKFCWDRQPD+SAFRES
Sbjct: 425 GGNREKMAIEHADAPGKCPEPSTTPDTFIGGFCATNFTFGPAAGKFCWDRQPDFSAFRES 484
Query: 496 SFGHGILEV 504
SFGHGILEV
Sbjct: 485 SFGHGILEV 493
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351722194|ref|NP_001235188.1| phytase precursor [Glycine max] gi|13925771|gb|AAK49438.1| phytase [Glycine max] gi|297718790|gb|ADI50286.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/474 (80%), Positives = 429/474 (90%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +IPSTL+GPF+P TVP+D +LRG AVD+P+TDP VRRRV GFEPEQ+SVSLS +HDS+
Sbjct: 27 HCHIPSTLEGPFDPVTVPFDPALRGVAVDLPETDPRVRRRVRGFEPEQISVSLSTSHDSV 86
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+W+TGEFQIG +IKPLDPKTV+S V+YGTSR L HEA G SL+Y+QLYPFEGLQNYT
Sbjct: 87 WISWVTGEFQIGLDIKPLDPKTVSSVVQYGTSRFELVHEARGQSLIYNQLYPFEGLQNYT 146
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHV+L GLEP+ YYYQCGDPS+ AMSD+YYFRT+P SG +SYP ++A+VGDLGLT
Sbjct: 147 SGIIHHVQLKGLEPSTLYYYQCGDPSLQAMSDIYYFRTMPISGSKSYPGKVAVVGDLGLT 206
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT TI H++SNEPDL+LL+GDVTYANLYLTNGTGSDCYSCSF TPIHETYQPRWDYW
Sbjct: 207 YNTTTTIGHLTSNEPDLLLLIGDVTYANLYLTNGTGSDCYSCSFPLTPIHETYQPRWDYW 266
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRFMQNLVS VPIMVVEGNHEIE QA N+TFVAYSSRFAFPS+ESGS S+FYYSFNAGGI
Sbjct: 267 GRFMQNLVSNVPIMVVEGNHEIEKQAENRTFVAYSSRFAFPSQESGSSSTFYYSFNAGGI 326
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLGAYI+YDK+ QYKWLE+DL NVDRS+TPWLV TWHPPWYSSY +HYREAECMRV
Sbjct: 327 HFIMLGAYINYDKTAEQYKWLERDLENVDRSITPWLVVTWHPPWYSSYEAHYREAECMRV 386
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
EME LLY+YGVDI+FNGHVHAYERSNRV+NY LDPCGPV+IT+GDGGN EKM+I ADEP
Sbjct: 387 EMEDLLYAYGVDIIFNGHVHAYERSNRVYNYNLDPCGPVYITVGDGGNREKMAIKFADEP 446
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
G+CP+P STPDPYMGGFCATNFT G KFCWDRQPDYSAFRESSFG+GILEV
Sbjct: 447 GHCPDPLSTPDPYMGGFCATNFTFGTKVSKFCWDRQPDYSAFRESSFGYGILEV 500
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462711|ref|XP_003601637.1| Purple acid phosphatase [Medicago truncatula] gi|355490685|gb|AES71888.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 823 bits (2125), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/474 (80%), Positives = 426/474 (89%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +P+TLDGPF+P TVP D S RGNAVDIPDTDPLV+R V F+PEQ+S+SLS +HDS+
Sbjct: 26 HGGVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNVEAFQPEQISLSLSTSHDSV 85
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+WITGEFQIG+NI+PLDP+TV S V+YG ++N +A G+SLVY QLYPFEGLQNYT
Sbjct: 86 WISWITGEFQIGENIEPLDPETVGSIVQYGRFGRSMNGQAVGYSLVYSQLYPFEGLQNYT 145
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHVRLTGL+PN Y YQCGDPS+ AMSDV+YFRT+P SGP+SYP RIA+VGDLGLT
Sbjct: 146 SGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLT 205
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT T+NHM SN PDL+LLVGD +YAN+YLTNGTGSDCYSCSFS TPIHETYQPRWDYW
Sbjct: 206 YNTTSTVNHMISNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYW 265
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GR+M+ L+S VP+MVVEGNHEIE QA N+TFVAYSSRFAFPSEESGS S+ YYSFNAGGI
Sbjct: 266 GRYMEPLISSVPVMVVEGNHEIEEQAENKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGI 325
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLG+YISYDKSG QYKWLEKDLA++DR VTPWLVATWH PWYS+Y SHYREAECMRV
Sbjct: 326 HFIMLGSYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKSHYREAECMRV 385
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
ME LLY YGVDIVFNGHVHAYERSNRV+NYTLDPCGPV+IT+GDGGN EKM+ITHADEP
Sbjct: 386 NMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEP 445
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
GNCPEP +TPD +M GFCA NFTSGPAAGKFCWD+QPDYSAFRESSFGHGILEV
Sbjct: 446 GNCPEPLTTPDKFMRGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGHGILEV 499
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|62177683|gb|AAX71115.1| phytase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/474 (80%), Positives = 426/474 (89%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +P+TLDGPF+P TVP D S RGNAVDIPDTDPLV+R V F+PEQ+S+SLS +HDS+
Sbjct: 26 HGGVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNVEAFQPEQISLSLSTSHDSV 85
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+WITGEFQIG+NI+PLDP+TV S V+YG ++N +A G+SLVY QLYPFEGLQNYT
Sbjct: 86 WISWITGEFQIGENIEPLDPETVGSIVQYGRFGRSMNGQAVGYSLVYSQLYPFEGLQNYT 145
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHVRLTGL+PN Y YQCGDPS+ AMSDV+YFRT+P SGP+SYP RIA+VGDLGLT
Sbjct: 146 SGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLT 205
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT T+NHM SN PDL+LLVGD +YAN+YLTNGTGSDCYSCSFS TPIHETYQPRWDYW
Sbjct: 206 YNTTSTVNHMISNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYW 265
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GR+M+ L+S VP+MVVEGNHEIE QA N+TFVAYSSRFAFPSEESGS S+ YYSFNAGGI
Sbjct: 266 GRYMEPLISSVPVMVVEGNHEIEEQAVNKTFVAYSSRFAFPSEESGSSSTLYYSFNAGGI 325
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLG+YISYDKSG QYKWLEKDLA++DR VTPWLVATWH PWYS+Y SHYREAECMRV
Sbjct: 326 HFIMLGSYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKSHYREAECMRV 385
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
ME LLY YGVDIVFNGHVHAYERSNRV+NYTLDPCGPV+IT+GDGGN EKM+ITHADEP
Sbjct: 386 NMEDLLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEP 445
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
GNCPEP +TPD +M GFCA NFTSGPAAGKFCWD+QPDYSAFRESSFGHGILEV
Sbjct: 446 GNCPEPLTTPDKFMRGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGHGILEV 499
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357462713|ref|XP_003601638.1| Purple acid phosphatase [Medicago truncatula] gi|355490686|gb|AES71889.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/485 (78%), Positives = 429/485 (88%), Gaps = 10/485 (2%)
Query: 30 TNANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDS 89
+ +P+TLDGPF+P TVP D S RGNAVDIPDTDPLV+R V F+PEQ+S+SLS +HDS
Sbjct: 25 VHGGVPTTLDGPFKPVTVPLDKSFRGNAVDIPDTDPLVQRNVEAFQPEQISLSLSTSHDS 84
Query: 90 IWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNY 149
+WI+WITGEFQIG+NI+PLDP+TV S V+YG ++N +A G+SLVY QLYPFEGLQNY
Sbjct: 85 VWISWITGEFQIGENIEPLDPETVDSIVQYGRFGRSMNVQAVGYSLVYSQLYPFEGLQNY 144
Query: 150 TSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGL 209
TSGIIHHVRLTGL+PN Y YQCGDPS+PAMSDV+YFRT+P SGP+SYP RIA+VGDLGL
Sbjct: 145 TSGIIHHVRLTGLKPNTLYQYQCGDPSLPAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGL 204
Query: 210 TYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269
TYNTT T+NHM+ N PDL+LLVGDV+YANLYLTNGTGSDCYSCSFS +PI ETYQPRWDY
Sbjct: 205 TYNTTSTVNHMTGNHPDLILLVGDVSYANLYLTNGTGSDCYSCSFSNSPIQETYQPRWDY 264
Query: 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGG 329
WGR+M+ L++ VPIMVVEGNHEIE QA N+TFVAYSSRFAFPSEESGS S+FYYSFNAGG
Sbjct: 265 WGRYMEPLIASVPIMVVEGNHEIEEQAENKTFVAYSSRFAFPSEESGSSSTFYYSFNAGG 324
Query: 330 IHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR 389
IHFIMLGAYISYDKSG QYKWLEKDLA++DR VTPWLVATWH PWYS+Y +HYRE ECMR
Sbjct: 325 IHFIMLGAYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYIAHYREVECMR 384
Query: 390 VEMEALLYSYGVDIVFNGH----------VHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439
VEME LLY YGVDIVFNGH VHAYERSNRV+NYTLDPCGPV+IT+GDGGN
Sbjct: 385 VEMEDLLYKYGVDIVFNGHIQNSHENIEQVHAYERSNRVYNYTLDPCGPVYITVGDGGNR 444
Query: 440 EKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGH 499
EKM+I HADEPGNCPEPS+TPD +MGGFCA NFTSGPAAGKFCWD+QPDYSAFRESSFGH
Sbjct: 445 EKMAIAHADEPGNCPEPSTTPDKFMGGFCAFNFTSGPAAGKFCWDQQPDYSAFRESSFGH 504
Query: 500 GILEV 504
GILEV
Sbjct: 505 GILEV 509
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|304421388|gb|ADM32493.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/474 (80%), Positives = 428/474 (90%)
Query: 31 NANIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSI 90
+ +IPSTL+GPF+P TVP+D +LRG AVD+P+TDP VRRRV GFEPEQ+SVSLS +HDS+
Sbjct: 27 HCHIPSTLEGPFDPVTVPFDPALRGVAVDLPETDPRVRRRVRGFEPEQISVSLSTSHDSV 86
Query: 91 WITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150
WI+W+TGEFQIG +IKPLDPKTV+S V+YGTSR L HEA G SL+Y+QLYPFEGLQNYT
Sbjct: 87 WISWVTGEFQIGLDIKPLDPKTVSSVVQYGTSRFELVHEARGQSLIYNQLYPFEGLQNYT 146
Query: 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLT 210
SGIIHHV+L GLEP+ YYYQCGDPS+ AMSD+YYFRT+P SG +SYP ++A+VGDLGLT
Sbjct: 147 SGIIHHVQLKGLEPSTLYYYQCGDPSLQAMSDIYYFRTMPISGSKSYPGKVAVVGDLGLT 206
Query: 211 YNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270
YNTT TI H++SNEPDL+LL+GDVTYANLYLTNGTGSDCYSCSF TPIHETYQPRWDYW
Sbjct: 207 YNTTTTIGHLTSNEPDLLLLIGDVTYANLYLTNGTGSDCYSCSFPLTPIHETYQPRWDYW 266
Query: 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGI 330
GRF+QNLVS VPIMVVEGNHEIE QA N+TFVAYSSRFAFPS+ESGS S+FYYSFNAGGI
Sbjct: 267 GRFVQNLVSNVPIMVVEGNHEIEKQAENRTFVAYSSRFAFPSQESGSSSTFYYSFNAGGI 326
Query: 331 HFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390
HFIMLGAYI+YDK+ QYKWLE+DL NVDRS+TPWLV TWHPPWYSSY +HYREAECMRV
Sbjct: 327 HFIMLGAYINYDKTAEQYKWLERDLENVDRSITPWLVVTWHPPWYSSYEAHYREAECMRV 386
Query: 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEP 450
EME LLY+YGVDI FNGHVHAYERSNRV+NY LDPCGPV+IT+GDGGN EKM+I ADEP
Sbjct: 387 EMEDLLYAYGVDITFNGHVHAYERSNRVYNYNLDPCGPVYITVGDGGNREKMAIKFADEP 446
Query: 451 GNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
G+CP+P STPDPYMGGFCATNFT G KFCWDRQPDYSAFRESSFG+GILEV
Sbjct: 447 GHCPDPLSTPDPYMGGFCATNFTFGTKVSKFCWDRQPDYSAFRESSFGYGILEV 500
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 530 | ||||||
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.879 | 0.875 | 0.739 | 5.9e-199 | |
| TAIR|locus:2046407 | 545 | PAP13 "purple acid phosphatase | 0.873 | 0.849 | 0.548 | 8.5e-136 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.367 | 0.449 | 0.477 | 8.5e-70 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.347 | 0.421 | 0.467 | 6.4e-66 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.350 | 0.435 | 0.478 | 1.3e-65 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.349 | 0.423 | 0.505 | 3.4e-65 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.464 | 0.525 | 0.367 | 7.6e-46 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.469 | 0.534 | 0.363 | 1.2e-43 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.439 | 0.528 | 0.352 | 1e-42 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.454 | 0.507 | 0.332 | 7.4e-40 |
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1926 (683.0 bits), Expect = 5.9e-199, P = 5.9e-199
Identities = 347/469 (73%), Positives = 395/469 (84%)
Query: 33 NIPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWI 92
+IPSTLDGPF P TVP D SLRG A+D+PDTDP VRRRV GFEPEQ+S+SLS +HDSIW+
Sbjct: 21 SIPSTLDGPFVPVTVPLDTSLRGQAIDLPDTDPRVRRRVIGFEPEQISLSLSSDHDSIWV 80
Query: 93 TWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152
+WITGEFQIG +KPLDP ++ S V++GT R +L+HEA GHSLVY QLYPF+GL NYTSG
Sbjct: 81 SWITGEFQIGKKVKPLDPTSINSVVQFGTLRHSLSHEAKGHSLVYSQLYPFDGLLNYTSG 140
Query: 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
IIHHVR+TGL+P+ YYY+CGDPS AMS +++FRT+P S P SYP RIA+VGDLGLTYN
Sbjct: 141 IIHHVRITGLKPSTIYYYRCGDPSRRAMSKIHHFRTMPVSSPSSYPGRIAVVGDLGLTYN 200
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272
TT TI+H+ N PDL+LL+GDV+YANLYLTNGT SDCYSCSF +TPIHETYQPRWDYWGR
Sbjct: 201 TTDTISHLIHNSPDLILLIGDVSYANLYLTNGTSSDCYSCSFPETPIHETYQPRWDYWGR 260
Query: 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 332
FM+NL SKVP+MV+EGNHEIE QA N+TF AYSSRFAFP ESGS S+ YYSFNAGGIHF
Sbjct: 261 FMENLTSKVPLMVIEGNHEIELQAENKTFEAYSSRFAFPFNESGSSSTLYYSFNAGGIHF 320
Query: 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXXREAECMRVEM 392
+MLGAYI+YDKS QY+WL+KDLA VDRSVTPWLVA+ REAECM+ M
Sbjct: 321 VMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHYREAECMKEAM 380
Query: 393 EALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGN 452
E LLYSYG DIVFNGHVHAYERSNRV+NY LDPCGPV+I IGDGGN EKM+I HAD+PG
Sbjct: 381 EELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPGK 440
Query: 453 CPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGI 501
CPEP +TPDP MGGFCA NFT P+ KFCWDRQPDYSA RESSFGHGI
Sbjct: 441 CPEPLTTPDPVMGGFCAWNFT--PS-DKFCWDRQPDYSALRESSFGHGI 486
|
|
| TAIR|locus:2046407 PAP13 "purple acid phosphatase 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1330 (473.2 bits), Expect = 8.5e-136, P = 8.5e-136
Identities = 265/483 (54%), Positives = 319/483 (66%)
Query: 35 PSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFE-PEQLSVSLSFNHDSIWIT 93
PSTLDGP P T P D +L A D+P++DP + ++ F PEQ+SVSLS++ DS+WI+
Sbjct: 27 PSTLDGPLNPVTAPLDPNLNPIAFDLPESDPSFVKPISEFLLPEQISVSLSYSFDSVWIS 86
Query: 94 WITGEFQIGD-NIKPLDPKTVASFVRYGTS--RTNLNHEATGHSLVYDQLYPFE-GLQNY 149
W+TGE+QIG+ + PLDP V S V+Y R ATGHS+VY+Q Y E G NY
Sbjct: 87 WVTGEYQIGEKDSAPLDPNCVQSIVQYREFDVRRTRKQNATGHSIVYNQQYSSENGFMNY 146
Query: 150 TSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGL 209
TSGIIHHV+LTGL+PN Y YQCGDPS+ AMS YYFRT+P S ++YP RI + GDLGL
Sbjct: 147 TSGIIHHVQLTGLKPNTLYRYQCGDPSLSAMSKEYYFRTMPKSTSENYPHRIVVAGDLGL 206
Query: 210 TYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH--------- 260
TYNT+ + H+ SN PDLV+L+G +YA+ YL N T DC SC +
Sbjct: 207 TYNTSTVLGHILSNHPDLVVLLGGFSYADTYLANKTKLDCSSCHCDQNGTSSDCGSCYSS 266
Query: 261 -ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVAYSSRFAFPSEESGSL 318
ETYQPRWDYWGRFM+ L + VP M+V G HEIE Q N TF AYSSRFAFPS ESGS
Sbjct: 267 GETYQPRWDYWGRFMEPLTANVPTMMVAGEHEIEPQTENNLTFAAYSSRFAFPSNESGSF 326
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S YYSFNAGG HFI+L +Y YD S QY WLE DL ++RS TPW+VAT
Sbjct: 327 SPLYYSFNAGGAHFIVLNSYTLYDNSSDQYIWLESDLIKINRSETPWVVATWSLPWYSTF 386
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
REAE MR+ +E LLY+Y VDIVFN HV AYERSNRV+NYTLD CGPV+IT G GG
Sbjct: 387 KGHYREAESMRIHLEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAGG- 445
Query: 439 LEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFG 498
K+ H D+PGN P+PS G N T P + C +QP+YSA+RESSFG
Sbjct: 446 AGKLETQHVDDPGNIPDPSQNYSCRSSGL---NSTLEPVKDETCPVKQPEYSAYRESSFG 502
Query: 499 HGI 501
GI
Sbjct: 503 FGI 505
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| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 493 (178.6 bits), Expect = 8.5e-70, Sum P(3) = 8.5e-70
Identities = 94/197 (47%), Positives = 124/197 (62%)
Query: 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGNQTFVAYSSRFAFPSEESGSL 318
+T+QP WD +GR ++ L SK P MV EGNHEIE + TF +Y++R+ P ES S
Sbjct: 180 DTHQPLWDSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFST 239
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S+ YYSF+ G+H +MLG+Y +D QY+WL+ DLA VDR TPW+V
Sbjct: 240 SNLYYSFDVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTN 299
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E MR ME+LL++ VD+VF+GHVHAYER RV+N DPCGP+HITIGDGGN
Sbjct: 300 EAHEGEGESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGN 359
Query: 439 LEKMSITHADEPGNCPE 455
E ++++ P E
Sbjct: 360 REGLALSFKKPPSPLSE 376
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| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 457 (165.9 bits), Expect = 6.4e-66, Sum P(3) = 6.4e-66
Identities = 87/186 (46%), Positives = 115/186 (61%)
Query: 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFPSEESGSL 318
+T+QP WD +GR ++ L S P MV EGNHEIE+ N +F +Y++R+ P ES S
Sbjct: 184 DTHQPLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSH 243
Query: 319 SSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXX 378
S+ YYSF+ G+H +MLG+Y Y+ QY WL+ DL VDR TPWLV
Sbjct: 244 SNLYYSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTN 303
Query: 379 XXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E MR +E+LLY VD+VF GHVH YER ++N DPCGP++ITIGDGGN
Sbjct: 304 KAHYGEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGN 363
Query: 439 LEKMSI 444
E +++
Sbjct: 364 REGLAL 369
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| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 462 (167.7 bits), Expect = 1.3e-65, Sum P(3) = 1.3e-65
Identities = 91/190 (47%), Positives = 115/190 (60%)
Query: 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSS 320
YQP WD +GR +Q L S+ P MV GNHE+E + F AY+ R+ P EESGS S+
Sbjct: 181 YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSN 240
Query: 321 FYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXX 380
YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA
Sbjct: 241 LYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEA 300
Query: 381 XXREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438
E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I IGDGGN
Sbjct: 301 HQGEKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGN 360
Query: 439 LEKMSITHAD 448
LE ++ + D
Sbjct: 361 LEGLATKYRD 370
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| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 471 (170.9 bits), Expect = 3.4e-65, Sum P(3) = 3.4e-65
Identities = 94/186 (50%), Positives = 116/186 (62%)
Query: 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFY 322
Q +WD +G +Q L S P MV +GNHE E+ FV+++SR+ P EESGS S+ Y
Sbjct: 183 QHKWDTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLY 242
Query: 323 YSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXXXXXXXX 382
YSF G+H IMLG+Y YD+ QY WL+ DL+ VDR TPWL+
Sbjct: 243 YSFEVAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQ 302
Query: 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 442
E + M EME LLY+ GVDIVF GHVHAYER+ RV N DPCGPVHITIGDGGN E +
Sbjct: 303 HEGDEMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGL 362
Query: 443 SITHAD 448
+ + D
Sbjct: 363 ARKYKD 368
|
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| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 104/283 (36%), Positives = 145/283 (51%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLVGDVTYANLYL 241
++F T P GP P ++GDLG +Y++ T+ H +N + VL VGD++YA+ Y
Sbjct: 146 FWFFTPPEIGPD-VPYTFGLIGDLGQSYDSNITLTHYENNPTKGQAVLFVGDISYADTY- 203
Query: 242 TNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAG-N 298
P H+ RWD WGRF + + P + GNHE++ + G N
Sbjct: 204 ----------------PDHDNR--RWDSWGRFAERSTAYQPWIWTTGNHELDFAPEIGEN 245
Query: 299 QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358
+ F ++ R+ P SGS F+YS G + I+L +Y +Y K QY+WLE++ V
Sbjct: 246 RPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEEFPKV 305
Query: 359 DRSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418
+R+ TPWL+ E E MRV EA Y VD+VF GHVHAYERS RV
Sbjct: 306 NRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERV 365
Query: 419 FN--YTL---------DPCGPVHITIGDGGNLEKMSITHADEP 450
N Y + D PV+ITIGDGGN+E ++ T EP
Sbjct: 366 SNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLA-TKMTEP 407
|
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| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 105/289 (36%), Positives = 144/289 (49%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLT 242
+ F T P GP P I+GDLG TY + T+ H SN + VL GD++YA+ +
Sbjct: 143 FSFTTPPKIGPD-VPYTFGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDH-- 199
Query: 243 NGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE--AQAGN-Q 299
P H+ Q +WD WGRFM+ + P + GNHEI+ G
Sbjct: 200 ---------------PNHD--QRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGEPH 242
Query: 300 TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVD 359
F Y+ R+ + S S S +YS H I+L +Y +Y K QY WLE++L NV+
Sbjct: 243 AFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKNVN 302
Query: 360 RSVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 419
R TPWL+ E E MRV E+ L + VD+V +GHVHAYERS R+
Sbjct: 303 REETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSERIS 362
Query: 420 N--YTL---------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
N Y + DP P++ITIGDGGN+E ++ + D P+PS
Sbjct: 363 NIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVD-----PQPS 406
|
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| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 96/272 (35%), Positives = 137/272 (50%)
Query: 201 IAIVGDLGLTYNTTCTI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259
I DLG TY + T+ N+MS+ + VL VGD++YA+ + P
Sbjct: 140 IRYYSDLGQTYASNQTLYNYMSNPKGQAVLFVGDLSYADDH-----------------PN 182
Query: 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE-AQAGNQT--FVAYSSRFAFPSEESG 316
H+ Q +WD +GRF++ + P GN+EI+ AQ+ ++T F Y +R+ P + S
Sbjct: 183 HD--QRKWDSYGRFVEPSAAYQPWSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQ 240
Query: 317 SLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATXXXXXXX 376
S S +YS + I+L +Y +YDK Q WL+ +L V+RS T WL+
Sbjct: 241 STSPLWYSIKRASTYIIVLSSYSAYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYN 300
Query: 377 XXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN--YTL---------DP 425
E E MRV E VDIVF GHVHAYERS R+ N Y + D
Sbjct: 301 SNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQ 360
Query: 426 CGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
P++ITIGDGGN+E ++ + D P+PS
Sbjct: 361 NAPIYITIGDGGNIEGIANSFTD-----PQPS 387
|
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| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 362 (132.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 91/274 (33%), Positives = 129/274 (47%)
Query: 184 YYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTN 243
++F T P P + K I+GD+G T+N+ T+ H + VL +GD++YA+ Y N
Sbjct: 141 FWFVTPPHVHPDASYK-FGIIGDMGQTFNSLSTLEHYMESGAQAVLFLGDLSYADRYQYN 199
Query: 244 GTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQT- 300
G RWD WGRF++ + P + GNHE++ G T
Sbjct: 200 DVGV------------------RWDSWGRFVERSTAYQPWLWSAGNHEVDYMPYMGEVTP 241
Query: 301 FVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDR 360
F Y R+ P S S S +Y+ H I+L +Y + K Q+ WL ++L VDR
Sbjct: 242 FRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSEELTRVDR 301
Query: 361 SVTPWLVATXXXXXXXXXXXXXREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420
TPWL+ E E MR E + VD++F GHVHAYERS R+ N
Sbjct: 302 EKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYERSYRISN 361
Query: 421 --YTL---------DPCGPVHITIGDGGNLEKMS 443
Y + D PV+IT+GDGGN E ++
Sbjct: 362 VRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLA 395
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SFU3 | PPA15_ARATH | 3, ., 1, ., 3, ., 2 | 0.7605 | 0.8849 | 0.8815 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_XVII000182 | hypothetical protein (542 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-89 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 9e-86 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 3e-19 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 9e-10 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 9e-09 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 5e-07 | |
| COG3540 | 522 | COG3540, PhoD, Phosphodiesterase/alkaline phosphat | 2e-05 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 2e-04 | |
| pfam09423 | 452 | pfam09423, PhoD, PhoD-like phosphatase | 4e-04 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 6e-04 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 281 bits (719), Expect = 1e-89
Identities = 167/433 (38%), Positives = 220/433 (50%), Gaps = 90/433 (20%)
Query: 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135
P+Q+ +SL D + I+WIT D+I P V YGT A G S
Sbjct: 44 PDQVHISL-VGPDKMRISWITQ-----DSIPPS--------VVYGTVSGKYEGSANGTSS 89
Query: 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQ 195
Y L Y SG I+ V + L+PN YYY+CG PS + + FRT P+
Sbjct: 90 SYHYLLI------YRSGQINDVVIGPLKPNTVYYYKCGGPS---STQEFSFRTPPSK--- 137
Query: 196 SYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
+P + A+ GDLG + T T+ H+S + D+ +L GD++YAN Y
Sbjct: 138 -FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFY--------------- 181
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEA--QAGNQTFVAYSSRFAFPSE 313
QP WD +GR +Q L S+ P MV GNHE+E + F AY++R+ P E
Sbjct: 182 --------QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFE 233
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPP 373
ESGS S+ YYSFN G+H IMLG+Y ++ QY+WLE +L +DR TPW+VA H P
Sbjct: 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAP 293
Query: 374 WYSSYSSHYREAEC--MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431
WY+S +H E E M+ ME LLY VD+VF GHVHAYER +RV+ D CGPV+I
Sbjct: 294 WYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYI 353
Query: 432 TIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSA 491
TIGDGGN E ++ + D +PD S
Sbjct: 354 TIGDGGNREGLATKYIDP------------------------------------KPDISL 377
Query: 492 FRESSFGHGILEV 504
FRE+SFGHG L V
Sbjct: 378 FREASFGHGQLNV 390
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 266 bits (683), Expect = 9e-86
Identities = 116/324 (35%), Positives = 151/324 (46%), Gaps = 74/324 (22%)
Query: 197 YPKRIAIVGDLGL-TYNTTCTINHM--SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
P + A+ GD+G T N+T T++H+ D +L VGD+ YA+ Y
Sbjct: 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN----------- 51
Query: 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE 313
RWD + R ++ L S VP MV GNHE + A+ RF FP
Sbjct: 52 ----------GSRWDTFMRQIEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHS 101
Query: 314 ESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH---QYKWLEKDLANVDRSVTPWLVATW 370
SGS S+ +YSF+ G +HF+ L + + G QY WLE DLA VDRS TPW++
Sbjct: 102 PSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMG 161
Query: 371 HPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL----- 423
H P Y S + H E E MR +E L Y YGVD+V +GHVHAYER+ V+N T+
Sbjct: 162 HRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221
Query: 424 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGK 480
+P GPVHI IG GGN E + A
Sbjct: 222 PYSNPKGPVHIVIGAGGNDEGLDPFSAPP------------------------------- 250
Query: 481 FCWDRQPDYSAFRESSFGHGILEV 504
P +SAFRES +G G L V
Sbjct: 251 ------PAWSAFRESDYGFGRLTV 268
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 85.2 bits (210), Expect = 3e-19
Identities = 39/217 (17%), Positives = 66/217 (30%), Gaps = 36/217 (16%)
Query: 200 RIAIVGDLGLTYNTTCTINHM----SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 255
RI ++GDL + + + +PDLVL +GD+
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPP--------------- 45
Query: 256 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
F L + P+ +V GNH+ ++ F + +
Sbjct: 46 ---------SLEVLALLFALKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVL--- 93
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWY 375
+ G + I L + ++LE + ++ + H P
Sbjct: 94 -----GNGDVSNGTVEIIGLSSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLS 148
Query: 376 SSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412
S S +E LL GVD+V GH H
Sbjct: 149 PSLDSGDDIYLFGEEALEDLLKDNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 59.2 bits (144), Expect = 9e-10
Identities = 63/275 (22%), Positives = 90/275 (32%), Gaps = 81/275 (29%)
Query: 200 RIAIVGDLG--LTYNTTCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCS 253
R +GD G T M+ PD +L +GD N Y G
Sbjct: 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGD----NFY---DDG------- 47
Query: 254 FSKTPIHETYQPRWD------YWGRFMQNLVSKVPIMVVEGNHE----IEAQAGNQTFVA 303
+ PR++ Y +Q VP +V GNH+ + AQ + T
Sbjct: 48 -----VGSVDDPRFETTFEDVYSAPSLQ-----VPWYLVLGNHDYSGNVSAQI-DYTKRP 96
Query: 304 YSSRFAFPSEESGSLSSFYYSFNAGG------IHFIML-------------GAYISYDKS 344
S R+ P+ +YY + + FIM+ Y +
Sbjct: 97 NSPRWTMPA--------YYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGK 148
Query: 345 GH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVD 402
Q WLEK LA S W + H P YSS + C+ + LL Y VD
Sbjct: 149 LAEEQLAWLEKTLAA---STADWKIVVGHHPIYSS--GEHGPTSCLVDRLLPLLKKYKVD 203
Query: 403 IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437
+GH H + + D G + G G
Sbjct: 204 AYLSGHDHNLQ------HIKDDGSGTSFVVSGAGS 232
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 9e-09
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 42/160 (26%)
Query: 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSL--SSF---YYSFN 326
+ L +P++ V GNH++ GN P+EES F Y+SF
Sbjct: 78 DVLSLLDPDIPLVCVCGNHDV----GNT-----------PTEESIKDYRDVFGDDYFSFW 122
Query: 327 AGGIHFIMLGAYISYDKSG------HQYKWLEKDLANVDRSVTPWLVATWHPPW------ 374
GG+ FI+L + + +D S Q WLE+ L S ++ H PW
Sbjct: 123 VGGVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPD 182
Query: 375 ----YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
Y + R+ + GV VF+GH H
Sbjct: 183 EEDSYFNIPKSVRK------PLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 5e-07
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 13/100 (13%)
Query: 342 DKSGHQYKWLEKDLANVDRSVTPWL-------VATWHPPWYSSYSSHYREAECMRVEMEA 394
+ L LA + P + H P Y + + +
Sbjct: 38 GDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALLE 97
Query: 395 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
LL YGVD+V +GH H YER D G ++I G
Sbjct: 98 LLEKYGVDLVLSGHTHVYER------REPDGGGTLYINPG 131
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|226070 COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 40/155 (25%), Positives = 52/155 (33%), Gaps = 26/155 (16%)
Query: 155 HHVRLTGLEPNNKYYYQ--CGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYN 212
HV L GL P+ Y+Y+ GD S V RT PA G A G
Sbjct: 101 VHVDLRGLSPDQDYFYRFKAGD----ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIG 156
Query: 213 TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT------PIHETYQPR 266
M+ EPD V+ +GD Y G D S + K E
Sbjct: 157 YMTAYKTMAKEEPDFVIHLGDYIYE-----YGPIPDEVSLNSWKNVVVTQHKSKEIETLD 211
Query: 267 WDYWGRFMQNLV--------SKVPIMVVEGNHEIE 293
DY GR+ + P +V +HE+
Sbjct: 212 -DYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVA 245
|
Length = 522 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 2e-04
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 41/80 (51%)
Query: 427 GPVHITIGDGGN-LEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDR 485
PVHI +G GN L+ D
Sbjct: 2 APVHIVVGAAGNGLDPF----------------------------------------PDP 21
Query: 486 QPDYSAFRESSFGHGILEVL 505
QP +SAFR+S +G+G L V
Sbjct: 22 QPPWSAFRDSDYGYGRLTVH 41
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|220234 pfam09423, PhoD, PhoD-like phosphatase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 25/153 (16%)
Query: 156 HVRLTGLEPNNKYYYQ--CGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGD----LGL 209
V +TGL P +Y+Y+ G + S V RT PA G R A+ G
Sbjct: 65 KVDVTGLPPGRRYFYRFRAGG----STSPVGRTRTAPAPGAAVDRLRFAVASCQNYEQGY 120
Query: 210 TYNTTCTINHMSSNE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268
+N HM+ + PD VL +GD Y + G + + P HE D
Sbjct: 121 -FN---AYRHMARRDDPDFVLHLGDYIYEYGPIGGGGYGNLVREHKGR-PAHEAVT-LAD 174
Query: 269 YWGRFMQNLVS--------KVPIMVVEGNHEIE 293
Y GR+ Q VP +V +HE+
Sbjct: 175 YRGRYAQYKSDPDLQAAHAAVPWIVTWDDHEVA 207
|
Length = 452 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 6e-04
Identities = 52/237 (21%), Positives = 84/237 (35%), Gaps = 47/237 (19%)
Query: 199 KRIAIVGDL---GLTYNTT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS 251
RIA + DL L ++ + + +PDL+++ GD+T D
Sbjct: 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTN-----------DGEP 49
Query: 252 CSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFP 311
+ + + L P++VV GNH+ G A+S +F
Sbjct: 50 EEY------RRLK-------ELLARLELPAPVIVVPGNHDARVVNGE----AFSDQFFNR 92
Query: 312 SEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH----QYKWLEKDLANVDRSVTPWLV 367
S GG I L + + G Q WLE+ LA +V
Sbjct: 93 YAVLVGACSS------GGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVV 146
Query: 368 ATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERSNRVFNYT 422
H P S + R A E+ +L ++G V +V +GH+H ++ N T
Sbjct: 147 VLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLAAQTVYQLNGT 203
|
Length = 301 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.98 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.97 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.95 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.93 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.91 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.9 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.9 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.88 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.87 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.87 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.81 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.78 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.73 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.69 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.65 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.65 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.64 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.64 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.64 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.57 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.55 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.5 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.49 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.47 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.45 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.43 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.42 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.35 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.32 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.25 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.21 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.21 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.19 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.11 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.09 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.03 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 98.95 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 98.91 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.9 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.89 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 98.85 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.85 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.85 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 98.83 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.8 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.8 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.79 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.71 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.68 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.68 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.66 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.6 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.59 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.56 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.54 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.38 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.35 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.34 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.3 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.28 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.28 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.21 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.21 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.2 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.19 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.18 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.15 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.02 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.02 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.01 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.94 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 97.92 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 97.91 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.89 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 97.85 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 97.79 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 97.78 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.72 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 97.72 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.6 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.57 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.52 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.39 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.33 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.29 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.18 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.18 | |
| PHA02239 | 235 | putative protein phosphatase | 97.08 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.05 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 96.86 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 96.83 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.82 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.66 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 96.59 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.59 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.57 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 96.57 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 96.37 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 96.33 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 96.24 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 95.88 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.86 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 95.84 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 95.8 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 95.77 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 95.68 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 95.63 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 95.59 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 95.34 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 95.29 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 95.08 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 93.46 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 93.27 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 93.06 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 92.33 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 91.97 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 91.46 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 91.24 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 91.18 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 90.69 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 90.66 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 89.89 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 89.6 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 87.2 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 86.6 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 86.05 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 85.31 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 84.25 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 81.31 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 80.21 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-84 Score=663.36 Aligned_cols=410 Identities=39% Similarity=0.636 Sum_probs=356.1
Q ss_pred CCCCCCCCCCccccCCCccCCCCCCCCCCCCCcccccCCCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCC
Q 009637 34 IPSTLDGPFEPETVPYDASLRGNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTV 113 (530)
Q Consensus 34 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~ 113 (530)
.+....|+..+.++++.+++.-....++...|.+. +.||||||++++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVV-----NSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccC-----CCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 45667888889999999998888888888777555 559999999999889999999998752
Q ss_pred ccEEEEecCCCCcceE-EEEEEEEeeeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCC
Q 009637 114 ASFVRYGTSRTNLNHE-ATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (530)
Q Consensus 114 ~~~V~yg~~~~~~~~~-a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 192 (530)
.++|+||+........ ++|.+..+.+.|.. -+|++|++|+|+|++|+|+|+||||||++. .||++|+|+|+|.
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p~- 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPPG- 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCCC-
Confidence 3799999876664332 35666665544332 247899999999999999999999999886 6999999999982
Q ss_pred CCCCCCeEEEEEccCCCCCChHHHHHHHHhCC-CCEEEEcCccccccccccCCCCCcccccCCCCCCccccch-HHHHHH
Q 009637 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ-PRWDYW 270 (530)
Q Consensus 193 ~~~~~~~rf~v~gD~g~~~~~~~~~~~l~~~~-pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~-~~wd~~ 270 (530)
+..|.+|+++||+|.+.....++....++. +|+|||+|||+||+.+ + .+||.|
T Consensus 144 --~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~-----------------------~n~~wD~f 198 (452)
T KOG1378|consen 144 --QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGY-----------------------SNWQWDEF 198 (452)
T ss_pred --ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCC-----------------------CccchHHH
Confidence 224899999999999977777777777665 9999999999998753 2 589999
Q ss_pred HHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC--CCCHHHH
Q 009637 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--DKSGHQY 348 (530)
Q Consensus 271 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--~~~~~Q~ 348 (530)
.++++++++.+|+|++.||||+...... .|..|..||.||.+++.+..++||||++|++|||+|+|+.++ ....+|+
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY 277 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQY 277 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHH
Confidence 9999999999999999999999865443 799999999999998888889999999999999999999875 3578999
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCC-CCchhH--HHHHHHHHHHHHcCCcEEEEccccCceeeeecccCcc--
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSS-HYREAE--CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-- 423 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~-~~~~~~--~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~-- 423 (530)
+||+++|++++|+++||+||+.|+|||+++.. ++++.+ .+|+.||+||.+++||+||.||+|+|||++|++|.++
T Consensus 278 ~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~ 357 (452)
T KOG1378|consen 278 QWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGT 357 (452)
T ss_pred HHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceeec
Confidence 99999999999887999999999999999875 666655 8899999999999999999999999999999999887
Q ss_pred --------CCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecC
Q 009637 424 --------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 495 (530)
Q Consensus 424 --------~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~ 495 (530)
+++||+||++|+||++|+.+..+ .+||+|||||+.
T Consensus 358 ~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~-------------------------------------~~~p~~Sa~R~~ 400 (452)
T KOG1378|consen 358 GWGPVHLVDGMAPIYITVGDGGNHEHLDPFS-------------------------------------SPQPEWSAFREG 400 (452)
T ss_pred cCCcccccCCCCCEEEEEccCCcccccCccc-------------------------------------CCCCcccccccc
Confidence 89999999999999999987421 268999999999
Q ss_pred CcceEEEEEeecceeeeeeeeccCCCceeeccccC
Q 009637 496 SFGHGILEVLSLSLLFVPLFLQPKFNTMVTHGLFL 530 (530)
Q Consensus 496 ~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~~~~~~ 530 (530)
+|||++|+++|.||++|++......+-++.+.+||
T Consensus 401 dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl 435 (452)
T KOG1378|consen 401 DFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWL 435 (452)
T ss_pred cCCeEEEEEecCceEEEEEEeccCCCceEeeeEEE
Confidence 99999999999999999999988888888888875
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-79 Score=647.85 Aligned_cols=373 Identities=44% Similarity=0.782 Sum_probs=324.9
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
....|+|||||+++ +++|+|+|.|.+. ..+.|+||++++.++.++.|++.+|+.. ..|.+
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 34689999999998 9999999999753 2478999999999999999998888632 24678
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEccCCCCCChHHHHHHHHhCCCCEEEEc
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLV 231 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~ 231 (530)
+++|+|+|+||+|+|+|+||||+. .+|++++|+|+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 999999999999999999999964 46899999998853 37999999999987666778999999999999999
Q ss_pred CccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccc--cccchHHHhhhcC
Q 009637 232 GDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFA 309 (530)
Q Consensus 232 GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~--~~~~f~~y~~~f~ 309 (530)
||++|++. |+.+|+.|.+.++++.+.+|+|+++||||..... ....|..|..+|.
T Consensus 173 GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Cccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 99999642 3678999999999999999999999999986432 2356788999999
Q ss_pred CCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch--hHH
Q 009637 310 FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AEC 387 (530)
Q Consensus 310 ~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~~ 387 (530)
||.++++...+.||||++|++|||+||++.++....+|++||+++|++++++++||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 998776677899999999999999999999888899999999999999988889999999999999986544332 245
Q ss_pred HHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCc
Q 009637 388 MRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGF 467 (530)
Q Consensus 388 ~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (530)
+|+.|++||++++||++|+||+|.|||++|+|+++++++|++||++|+||+.|++...+
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~--------------------- 368 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKY--------------------- 368 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCcccccccccc---------------------
Confidence 78999999999999999999999999999999999999999999999999998865321
Q ss_pred cccccccCCCCCCCCCCCCCCccceecCCcceEEEEEeecceeeeeeeeccCCCceeeccccC
Q 009637 468 CATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFVPLFLQPKFNTMVTHGLFL 530 (530)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~n~t~~~~~~~~~~~~~~~~~~~~~~ 530 (530)
+.++|+||+||+.+|||++|+|+|.|||+|+++.+++.+.++.+-+||
T Consensus 369 ---------------~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i 416 (427)
T PLN02533 369 ---------------IDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWL 416 (427)
T ss_pred ---------------CCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEE
Confidence 136789999999999999999999999999999877777777776654
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=366.70 Aligned_cols=264 Identities=43% Similarity=0.739 Sum_probs=210.7
Q ss_pred CCeEEEEEccCCCC-CChHHHHHHHHh--CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH
Q 009637 197 YPKRIAIVGDLGLT-YNTTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (530)
Q Consensus 197 ~~~rf~v~gD~g~~-~~~~~~~~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~ 273 (530)
.++||+++||+|.. .....+++++.+ .+|||||++||++|++... .+.+|+.|.+.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~---------------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN---------------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc---------------------cchhHHHHHHH
Confidence 37999999999973 456788888887 6899999999999864210 12579999999
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC---CCCHHHHHH
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY---DKSGHQYKW 350 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~---~~~~~Q~~W 350 (530)
++++.+.+|+++++||||............+..++.++........+.||+|++|++|||+|||+... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999999999999997543322111111123344433344568899999999999999998765 568999999
Q ss_pred HHHHHhcccCCCCCEEEEEeCCCCccCCCCCCc--hhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc------
Q 009637 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT------ 422 (530)
Q Consensus 351 L~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~--~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~------ 422 (530)
|+++|+++++++++|+||++|+|+|+....... .....++.|++||.+|+|+++|+||+|.|+|++|+++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987667899999999999987654332 245678999999999999999999999999999998865
Q ss_pred --cCCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecCCcceE
Q 009637 423 --LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 500 (530)
Q Consensus 423 --~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~ 500 (530)
.+++|++||++|+||+.+...... ...++|++++...|||+
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPFS-------------------------------------APPPAWSAFRESDYGFG 264 (294)
T ss_pred cccCCCccEEEEECCCccccCcCccc-------------------------------------CCCCCceEEEeccCCEE
Confidence 368999999999999977543110 02368999999999999
Q ss_pred EEEEeecceeeeeeeecc
Q 009637 501 ILEVLSLSLLFVPLFLQP 518 (530)
Q Consensus 501 ~l~v~n~t~~~~~~~~~~ 518 (530)
+|+|.|.|+|.|+++...
T Consensus 265 ~~~~~~~t~l~~~~~~~~ 282 (294)
T cd00839 265 RLTVHNSTHLHFEWIRND 282 (294)
T ss_pred EEEEEecCeEEEEEEECC
Confidence 999999999999888744
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-31 Score=266.01 Aligned_cols=243 Identities=25% Similarity=0.394 Sum_probs=171.7
Q ss_pred eEEEEEccCCCC--CChHHH---HHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHH-HHHH
Q 009637 199 KRIAIVGDLGLT--YNTTCT---INHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYWG 271 (530)
Q Consensus 199 ~rf~v~gD~g~~--~~~~~~---~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~w-d~~~ 271 (530)
++|+++||+|.. .....+ +.++. +.+|||||++||++|+++... .+..+| +.+.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~-------------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS-------------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC-------------------CcchHHHHHHH
Confidence 489999999985 222222 23333 369999999999999753210 011233 3455
Q ss_pred HHHHHhhhcCCeEEccCCcccccccccc-chHH--HhhhcCCCCCCCCCCCcceEEEEcC------cEEEEEEcccccC-
Q 009637 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVA--YSSRFAFPSEESGSLSSFYYSFNAG------GIHFIMLGAYISY- 341 (530)
Q Consensus 272 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~-~f~~--y~~~f~~P~~~~~~~~~~yYsf~~G------~v~fI~Ldt~~~~- 341 (530)
+.++.+..++|+++++||||........ .+.. +..++.+| ..||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555555689999999999997432111 1111 12223333 469999988 7999999996431
Q ss_pred --------------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEc
Q 009637 342 --------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 407 (530)
Q Consensus 342 --------------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsG 407 (530)
....+|++||+++|+++. .+|+||++|+|+++...... ....++.|++++.+++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~--~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGP--TSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCC--cHHHHHHHHHHHHHcCCCEEEeC
Confidence 136899999999999864 37999999999997653221 24678899999999999999999
Q ss_pred cccCceeeeecccCccCCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCC
Q 009637 408 HVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQP 487 (530)
Q Consensus 408 H~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 487 (530)
|.|.+++..+ ...|+.||++|+||...+..... ...+|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~~------------------------------------~~~~~ 246 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKHI------------------------------------DKVPQ 246 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCcc------------------------------------Ccccc
Confidence 9999998864 23699999999988865432100 01235
Q ss_pred CccceecCCcceEEEEEeecceeeeeeee
Q 009637 488 DYSAFRESSFGHGILEVLSLSLLFVPLFL 516 (530)
Q Consensus 488 ~wsa~r~~~~G~~~l~v~n~t~~~~~~~~ 516 (530)
+|++++...+||.+++|.+. ++.++++-
T Consensus 247 ~~~~~~~~~~Gy~~i~v~~~-~l~~~~~~ 274 (277)
T cd07378 247 FFSGFTSSGGGFAYLELTKE-ELTVRFYD 274 (277)
T ss_pred cccccccCCCCEEEEEEecC-EEEEEEEC
Confidence 78899999999999999876 67777664
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=267.54 Aligned_cols=238 Identities=20% Similarity=0.332 Sum_probs=170.7
Q ss_pred CeEEEEEccCCCCCChHHHHHH-HH----hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHH-HH
Q 009637 198 PKRIAIVGDLGLTYNTTCTINH-MS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 271 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~~~~~~~-l~----~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~-~~ 271 (530)
.++|+++||+|.+...+..+++ |. +.++|||+.+||+. .++.. + ...++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~--s-----------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVD--G-----------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCC--C-----------------ccchhHHhhHh
Confidence 6899999999976444444333 22 46899999999998 33321 1 11355654 44
Q ss_pred HHHHHhh--hcCCeEEccCCccccccccccc--hH------------H------HhhhcCCCCCCCCCCCcceEEE----
Q 009637 272 RFMQNLV--SKVPIMVVEGNHEIEAQAGNQT--FV------------A------YSSRFAFPSEESGSLSSFYYSF---- 325 (530)
Q Consensus 272 ~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~--f~------------~------y~~~f~~P~~~~~~~~~~yYsf---- 325 (530)
+...... .++||++++||||+.++...+. +. . ...||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 4444443 5799999999999975533211 11 1 125777773 57754
Q ss_pred Ec-------------CcEEEEEEccccc-----C-CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhH
Q 009637 326 NA-------------GGIHFIMLGAYIS-----Y-DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 386 (530)
Q Consensus 326 ~~-------------G~v~fI~Ldt~~~-----~-~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~ 386 (530)
.. ..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCCH
Confidence 22 2389999999632 1 22578999999999754 356789999999999998642 2345
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCC
Q 009637 387 CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGG 466 (530)
Q Consensus 387 ~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (530)
+++..|++||++|+||++|+||+|.+|+.. ++|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 789999999999999999999999999974 46899999999998543210
Q ss_pred ccccccccCCCCCCCCCCCCCCccceecCCcceEEEEEeecceeeeeee
Q 009637 467 FCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFVPLF 515 (530)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~n~t~~~~~~~ 515 (530)
...+|++|.....||..++ .+.+.+....+
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~-l~~~~l~~~fi 314 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHE-LNAEGMVTKFV 314 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEE-EecCEEEEEEE
Confidence 2246788988999999999 66778888544
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-26 Score=230.59 Aligned_cols=204 Identities=23% Similarity=0.366 Sum_probs=148.5
Q ss_pred CeEEEEEccCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 198 PKRIAIVGDLGLTYN-----------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-----------------~~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
+++|++++|+|.+.. ....++.+.+. +||||+++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999998721 12345556555 89999999999963 211
Q ss_pred ccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccc
Q 009637 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 338 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~ 338 (530)
.+....+|+.+.+.++.+...+|+++++||||+........+..|...| +..||+|++|+++||+|||.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 0111245777777777776789999999999986433333344454444 23589999999999999996
Q ss_pred ccC------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC----chhHHHHHHHHHHHHHcCCcEEEEcc
Q 009637 339 ISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY----REAECMRVEMEALLYSYGVDIVFNGH 408 (530)
Q Consensus 339 ~~~------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~----~~~~~~r~~l~~ll~k~~VdlvlsGH 408 (530)
... ....+|++||+++|+++.+.+.+++||++|+|++....... ......++++.++|++++|+++||||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 13579999999999997544567899999999986432211 12235678999999999999999999
Q ss_pred ccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 409 ~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
+|.+++.. -.|+.+++++++|.
T Consensus 215 ~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 215 YHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred cccCCceE--------ECCEEEEEcCceec
Confidence 99988743 24788888887765
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-23 Score=226.42 Aligned_cols=261 Identities=23% Similarity=0.351 Sum_probs=141.5
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEccCCCCCChHHHHHHHHh-CCCCEEE
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSS-NEPDLVL 229 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD~g~~~~~~~~~~~l~~-~~pDfvl 229 (530)
..+.++|.|+||+|+|+|+||+........|.+++|||+|..... ++||++++|.+.......+++++.+ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 458999999999999999999998543578899999999765433 6999999999876556778899988 6999999
Q ss_pred EcCcccccccc--ccCCCCCcccccCCC--CCCccccchHHHHHHH--HHHHHhhhcCCeEEccCCccccccccc-----
Q 009637 230 LVGDVTYANLY--LTNGTGSDCYSCSFS--KTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN----- 298 (530)
Q Consensus 230 ~~GDl~Yad~~--~~~G~~~~cy~~~~~--~~~~~~~y~~~wd~~~--~~l~~l~~~vP~~~v~GNHD~~~~~~~----- 298 (530)
|+||.+|++.. ..+.....-.....| .....+.|+.+|..+. ..++.+.+.+|+++++.+||+.++...
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999998741 000000000000001 1223345666665553 457778889999999999999865431
Q ss_pred -------------cchHHHhhhcCCCCCC-CCCCCcceEEEEcCc-EEEEEEcccccCC---------------------
Q 009637 299 -------------QTFVAYSSRFAFPSEE-SGSLSSFYYSFNAGG-IHFIMLGAYISYD--------------------- 342 (530)
Q Consensus 299 -------------~~f~~y~~~f~~P~~~-~~~~~~~yYsf~~G~-v~fI~Ldt~~~~~--------------------- 342 (530)
..+.+|.+........ .+.....|++|.+|+ +.|++||+.....
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~m 297 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTM 297 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--S
T ss_pred ccccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCc
Confidence 1112333322221111 122456799999999 9999999853221
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCC-----------CCCCchhHHHHHHHHHHHHHcCCc--EEEEccc
Q 009637 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSY-----------SSHYREAECMRVEMEALLYSYGVD--IVFNGHV 409 (530)
Q Consensus 343 ~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~-----------~~~~~~~~~~r~~l~~ll~k~~Vd--lvlsGH~ 409 (530)
.+.+|++||++.|++ +.++|+|+..-.|+.... ...+......|++|.++|.+.++. ++|+|.+
T Consensus 298 LG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDv 374 (453)
T PF09423_consen 298 LGEEQWDWLEDWLAS---SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDV 374 (453)
T ss_dssp S-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SS
T ss_pred CCHHHHHHHHHHHhc---CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCc
Confidence 178999999999998 458999999888865432 123444556799999999988875 8999999
Q ss_pred cCceeee
Q 009637 410 HAYERSN 416 (530)
Q Consensus 410 H~yeR~~ 416 (530)
|......
T Consensus 375 H~~~~~~ 381 (453)
T PF09423_consen 375 HASAASR 381 (453)
T ss_dssp SSEEEEE
T ss_pred chheeee
Confidence 9987664
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.5e-23 Score=203.98 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=136.7
Q ss_pred EEEEEccCCCCCC-------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 200 RIAIVGDLGLTYN-------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 200 rf~v~gD~g~~~~-------------~~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
||++++|+|.+.. ...+++.+.+. +||+|+++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 6999999998743 13455566665 89999999999952 22 2
Q ss_pred HHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC---
Q 009637 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--- 341 (530)
Q Consensus 265 ~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--- 341 (530)
..|+.+.+.++.+ ++|++.++||||... .+...|..... .....+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA--------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH--------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3456666777766 799999999999841 22233321100 2345789999999999999986432
Q ss_pred -CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeeec
Q 009637 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRV 418 (530)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv 418 (530)
....+|++||++.|++.. . .++|+++|+|++.......+. ....++.+.+++.++ +|+++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~--~-~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP--D-KPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC--C-CCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 236899999999999864 2 347788888877643211111 112367899999999 99999999999976653
Q ss_pred ccCccCCCCcEEEEeCCCccc
Q 009637 419 FNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 419 ~~~~~~~~G~vyIv~G~gG~~ 439 (530)
-+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 378999999988774
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=208.52 Aligned_cols=198 Identities=23% Similarity=0.304 Sum_probs=136.8
Q ss_pred eEEEEEccCCCCCC--------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 199 KRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 199 ~rf~v~gD~g~~~~--------------~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
|||++++|+|.... ..++++.+++.+||+|+++||+++. +.. ...
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999995532 1334666767789999999999952 210 012
Q ss_pred HHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccccc----
Q 009637 265 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS---- 340 (530)
Q Consensus 265 ~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~---- 340 (530)
..|+.+.+.++.+ ++|+++++||||...... .+.. +... ...+..||+|++++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666655 689999999999863321 1111 0011 1234569999999999999998521
Q ss_pred ------------------------------CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHH
Q 009637 341 ------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 390 (530)
Q Consensus 341 ------------------------------~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~ 390 (530)
.....+|++||+++|+++..+. .++||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCHH
Confidence 1235899999999999875333 358999999987654211 11112357
Q ss_pred HHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccc
Q 009637 391 EMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 391 ~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~ 439 (530)
.+.+++.++ +|+++|+||+|.++... .+|+.|+++|+-...
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~~ 247 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVET 247 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCccc--------cCCeeEEEechhhcC
Confidence 889999996 89999999999987542 478999988876553
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=207.13 Aligned_cols=278 Identities=23% Similarity=0.285 Sum_probs=192.7
Q ss_pred ccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCC
Q 009637 114 ASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASG 193 (530)
Q Consensus 114 ~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~ 193 (530)
.-.++|++.++.-+.+..|+... .-...+.++|.++||+|++.|+||+...+ ..|.++.|||+|..+
T Consensus 71 ~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~gL~P~~~yfYRf~~~~--~~spvGrtrTapa~~ 137 (522)
T COG3540 71 PVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRGLSPDQDYFYRFKAGD--ERSPVGRTRTAPAPG 137 (522)
T ss_pred ceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccCCCCCceEEEEEeeCC--ccccccccccCCCCC
Confidence 34567777765555444444321 11245789999999999999999999876 778999999999987
Q ss_pred CCCCCeEEEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCccccc------CCCC-----CCcccc
Q 009637 194 PQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC------SFSK-----TPIHET 262 (530)
Q Consensus 194 ~~~~~~rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~------~~~~-----~~~~~~ 262 (530)
..-.-++|++.++.|...+...+.++|.+.+|||+||.||.+|+++-. .+.++. ..+. ...-+.
T Consensus 138 ~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~-----~~~~~~~~~~~~~~~~~~~~ei~TLdd 212 (522)
T COG3540 138 RAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPI-----PDEVSLNSWKNVVVTQHKSKEIETLDD 212 (522)
T ss_pred CcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCc-----ccccccccccccccCCCCCcceeeHHH
Confidence 543334555555555555667788999999999999999999987532 111100 1111 112357
Q ss_pred chHHHHHHH--HHHHHhhhcCCeEEccCCccccccccc-------------------cchHHHhhhcCCCCCCCC--CCC
Q 009637 263 YQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN-------------------QTFVAYSSRFAFPSEESG--SLS 319 (530)
Q Consensus 263 y~~~wd~~~--~~l~~l~~~vP~~~v~GNHD~~~~~~~-------------------~~f~~y~~~f~~P~~~~~--~~~ 319 (530)
|+.+|..+. ..++...+..||++.+.+||+.++... ..+++|.+ .||-..+. ...
T Consensus 213 YR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE--~mPiR~~~~p~~~ 290 (522)
T COG3540 213 YRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYE--HMPIRYSSLPTDG 290 (522)
T ss_pred HhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHH--hCccccccCCccc
Confidence 888887664 567788889999999999999876321 12244444 35544322 235
Q ss_pred cceEEEEcCc-EEEEEEcccccC------C----------------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCcc
Q 009637 320 SFYYSFNAGG-IHFIMLGAYISY------D----------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYS 376 (530)
Q Consensus 320 ~~yYsf~~G~-v~fI~Ldt~~~~------~----------------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~ 376 (530)
..|.+|.+|+ +.|.+||+.... + .+.+|.+||+..|.+ +++.|.|+..-.|+--
T Consensus 291 ~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~ 367 (522)
T COG3540 291 RLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGL 367 (522)
T ss_pred eeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeE
Confidence 7899999998 678999986433 1 178999999999999 6789999988887522
Q ss_pred C---CC----------CCCchhHHHHHHHHHHHHHcCCc--EEEEccccCcee
Q 009637 377 S---YS----------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYER 414 (530)
Q Consensus 377 s---~~----------~~~~~~~~~r~~l~~ll~k~~Vd--lvlsGH~H~yeR 414 (530)
. .. ..++....-|+.|..++.+.++. ++|.|.+|...-
T Consensus 368 ~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 368 VVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred eecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHH
Confidence 1 00 11223334588999999999875 899999996544
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=186.06 Aligned_cols=201 Identities=23% Similarity=0.334 Sum_probs=131.3
Q ss_pred CeEEEEEccCCCCCC--hHHHHH---HHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHH-HHH
Q 009637 198 PKRIAIVGDLGLTYN--TTCTIN---HMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYW 270 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--~~~~~~---~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~w-d~~ 270 (530)
+++|+++||+|.... ...+.. +|. +.++||||.+||.+|.++..+. +.+++ +.|
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-------------------~Dp~Fq~sF 103 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-------------------NDPRFQDSF 103 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-------------------CChhHHhhh
Confidence 699999999996532 222222 233 3589999999999997653211 11222 122
Q ss_pred HHHHHHhhhcCCeEEccCCcccccccccc---chHHHhhhcCCCCCCCCCCCcceEE------EEcCcEEEEEEcccccC
Q 009637 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQ---TFVAYSSRFAFPSEESGSLSSFYYS------FNAGGIHFIMLGAYISY 341 (530)
Q Consensus 271 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~---~f~~y~~~f~~P~~~~~~~~~~yYs------f~~G~v~fI~Ldt~~~~ 341 (530)
.+....-..+.||+.+.||||+.++...+ .+.....||..|. .||. +..-++.++++|+.+..
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~ 175 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLC 175 (336)
T ss_pred hhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecc
Confidence 22222222356999999999998764322 1344445665442 1221 11113445555543211
Q ss_pred C--------------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEc
Q 009637 342 D--------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 407 (530)
Q Consensus 342 ~--------------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsG 407 (530)
. ....|+.||+..|++ +.++|+||++|+|+.+.+ +.+...|+++.|.|||+.++||++++|
T Consensus 176 ~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nG 250 (336)
T KOG2679|consen 176 TDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYING 250 (336)
T ss_pred cccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEec
Confidence 1 146788999999999 578899999999998764 345677999999999999999999999
Q ss_pred cccCceeeeecccCccCCC-CcEEEEeCCCc
Q 009637 408 HVHAYERSNRVFNYTLDPC-GPVHITIGDGG 437 (530)
Q Consensus 408 H~H~yeR~~pv~~~~~~~~-G~vyIv~G~gG 437 (530)
|+|+.|..- +++ ++-|+++|+|.
T Consensus 251 HDHcLQhis-------~~e~~iqf~tSGagS 274 (336)
T KOG2679|consen 251 HDHCLQHIS-------SPESGIQFVTSGAGS 274 (336)
T ss_pred chhhhhhcc-------CCCCCeeEEeeCCcc
Confidence 999999874 334 45555555554
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-21 Score=191.04 Aligned_cols=193 Identities=21% Similarity=0.269 Sum_probs=127.6
Q ss_pred EEEEccCCCCCCh--------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 201 IAIVGDLGLTYNT--------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 201 f~v~gD~g~~~~~--------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
|++++|+|.+... ..+++.+.+.+||+|+++||++.... ..+. ....++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999986431 11345566779999999999995311 1110 01223567888888
Q ss_pred HHHHhh--hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEE--EEcCcEEEEEEccccc--------
Q 009637 273 FMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYS--FNAGGIHFIMLGAYIS-------- 340 (530)
Q Consensus 273 ~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYs--f~~G~v~fI~Ldt~~~-------- 340 (530)
.+.... ...|++.++||||..+.........|..+|.... .....+|. +..|+++||+|||...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATG----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheec----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 776643 2689999999999964332222333333331100 11122333 3459999999999642
Q ss_pred --CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeec
Q 009637 341 --YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418 (530)
Q Consensus 341 --~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv 418 (530)
.....+|++||+++|++.. ..+++||++|+|++...... . ...+ .+.++|++++|+++||||+|.+++..|+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred eeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 2236899999999999863 34579999999986532211 1 1122 3899999999999999999999996665
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=188.00 Aligned_cols=191 Identities=19% Similarity=0.264 Sum_probs=123.8
Q ss_pred CeEEEEEccCCCCC---------Ch----HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCcccc
Q 009637 198 PKRIAIVGDLGLTY---------NT----TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (530)
Q Consensus 198 ~~rf~v~gD~g~~~---------~~----~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~ 262 (530)
++||++++|+|... +. .++++++.+. +|||||++||++. +++
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC-----------------
Confidence 69999999999732 11 3345555543 6999999999994 222
Q ss_pred chHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC-
Q 009637 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY- 341 (530)
Q Consensus 263 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~- 341 (530)
...+..+.+.++.+ .+|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~ 134 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGV 134 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCC
Confidence 23455566666665 689999999999842 12222211111 12234445567999999996432
Q ss_pred ---CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeee
Q 009637 342 ---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 416 (530)
Q Consensus 342 ---~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~ 416 (530)
..+.+|++||+++|++... .+-+|+++|+|+... ....+. .....+++.++++++ +|+++|+||+|.....
T Consensus 135 ~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~-~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~- 210 (275)
T PRK11148 135 PHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAG-CAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL- 210 (275)
T ss_pred cCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCC-cchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc-
Confidence 2368999999999998642 232555555665432 211111 111346899999998 8999999999986543
Q ss_pred ecccCccCCCCcEEEEeCCCcc
Q 009637 417 RVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 417 pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
..+|+.++++++.+.
T Consensus 211 -------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 -------DWNGRRLLATPSTCV 225 (275)
T ss_pred -------eECCEEEEEcCCCcC
Confidence 236888887776654
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-19 Score=174.33 Aligned_cols=150 Identities=19% Similarity=0.255 Sum_probs=108.9
Q ss_pred eEEEEEccCCCCCC-h----HH----HHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHH
Q 009637 199 KRIAIVGDLGLTYN-T----TC----TINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~----~~----~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~ 269 (530)
|||++++|+|.... . .+ +++.+.+.+||+|+++||+++. +. ...+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GD-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CC-----------------CHHHHHH
Confidence 58999999997533 1 12 2334445689999999999952 11 0246888
Q ss_pred HHHHHHHhh-hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHH
Q 009637 270 WGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (530)
Q Consensus 270 ~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (530)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888886 67999999999992 233333 2358999
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-----hHHHHHHHHHHHHHc-CCcEEEEccccCceeeee
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-----AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNR 417 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-----~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~p 417 (530)
+||++.|++.. ..++|+++|+|++......... ....++.|++|++++ +|++||+||+|.+.+...
T Consensus 95 ~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 95 QWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred HHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 99999999853 2348999999988654321111 123456788999999 799999999999988753
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-18 Score=174.11 Aligned_cols=192 Identities=20% Similarity=0.281 Sum_probs=127.8
Q ss_pred EEccCCCCCC---hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchH--HHHHHHHHHH
Q 009637 203 IVGDLGLTYN---TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP--RWDYWGRFMQ 275 (530)
Q Consensus 203 v~gD~g~~~~---~~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~--~wd~~~~~l~ 275 (530)
-+|+.++... ..++++.+.+. +|||||++||+++.+.+... .+ ... .+..+.+.++
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~----------------~~-~~~~~~~~~~~~~l~ 104 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQT----------------PE-TLVLISISNLTSLLK 104 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhc----------------hh-HHHHHHHHHHHHHHH
Confidence 3566664422 24567777776 89999999999975432100 00 011 2455666677
Q ss_pred HhhhcCCeEEccCCcccccccc-------ccchHHHhhhcC--CCCCCC-CCCCcceEEEE-cCcEEEEEEcccccC---
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAG-------NQTFVAYSSRFA--FPSEES-GSLSSFYYSFN-AGGIHFIMLGAYISY--- 341 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~-------~~~f~~y~~~f~--~P~~~~-~~~~~~yYsf~-~G~v~fI~Ldt~~~~--- 341 (530)
.....+|+++++||||...... ...+..+...|. ++.+.. ....+.||++. .++++||+|||....
T Consensus 105 ~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~ 184 (296)
T cd00842 105 KAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN 184 (296)
T ss_pred HhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC
Confidence 7778999999999999975421 122333333332 332111 11346789999 899999999996432
Q ss_pred --------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccC
Q 009637 342 --------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHA 411 (530)
Q Consensus 342 --------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~ 411 (530)
....+|++||+++|+++.+++. .++|++|+|+....... ....+++|.+|+.+|. |.++|+||+|.
T Consensus 185 ~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~-~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~ 260 (296)
T cd00842 185 FWLLGSNETDPAGQLQWLEDELQEAEQAGE-KVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHR 260 (296)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHHHHHCCC-eEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeeccccc
Confidence 1247899999999999754433 37788899987653221 1345788999999997 78899999999
Q ss_pred ceee
Q 009637 412 YERS 415 (530)
Q Consensus 412 yeR~ 415 (530)
.+..
T Consensus 261 d~~~ 264 (296)
T cd00842 261 DEFR 264 (296)
T ss_pred ceEE
Confidence 8765
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-17 Score=152.07 Aligned_cols=188 Identities=23% Similarity=0.277 Sum_probs=100.5
Q ss_pred eEEEEEccCCCCCChH-----HHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHH-H
Q 009637 199 KRIAIVGDLGLTYNTT-----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG-R 272 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~~-----~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~-~ 272 (530)
+||+++||+|...... .......+.++|+||++||+++.... ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----------------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP-----------------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH-----------------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc-----------------------cccchhhhcc
Confidence 6999999999875433 22333456899999999999964210 11111111 1
Q ss_pred HHHHhhhcCCeEEccCCccccccccccchHHHhhhcCC-CCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCH---HHH
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF-PSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSG---HQY 348 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~-P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~---~Q~ 348 (530)
........+|+++++||||................... .........+......................... .++
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 23445678999999999999743211111111111100 00000000000011111222222222211111222 333
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch--hHHHHHHHHHHHHHcCCcEEEEccccCc
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAY 412 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~~~r~~l~~ll~k~~VdlvlsGH~H~y 412 (530)
.|+...++. ...+++|+++|+|+++........ ....++.+..++.+++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333333 446789999999999865432110 1235778999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.3e-16 Score=152.78 Aligned_cols=170 Identities=19% Similarity=0.250 Sum_probs=110.7
Q ss_pred HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHH----HHHHHHHHhhhcCCeEEccC
Q 009637 214 TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD----YWGRFMQNLVSKVPIMVVEG 288 (530)
Q Consensus 214 ~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd----~~~~~l~~l~~~vP~~~v~G 288 (530)
++.+..+.+ .+||+|+++||++. .|... -..+|. .|.+.+.++...+|++.++|
T Consensus 34 r~~~~~~~~~l~PD~vv~lGDL~d------~G~~~---------------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpG 92 (257)
T cd08163 34 RRNWRYMQKQLKPDSTIFLGDLFD------GGRDW---------------ADEYWKKEYNRFMRIFDPSPGRKMVESLPG 92 (257)
T ss_pred HHHHHHHHHhcCCCEEEEeccccc------CCeeC---------------cHHHHHHHHHHHHHHhcCCCccceEEEeCC
Confidence 444555554 58999999999985 23310 023443 33333333333579999999
Q ss_pred Ccccccccc--ccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC-----CCCHHHHHHHHHHHhcccCC
Q 009637 289 NHEIEAQAG--NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-----DKSGHQYKWLEKDLANVDRS 361 (530)
Q Consensus 289 NHD~~~~~~--~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~ 361 (530)
|||+..... ......|.+.|. ..+|+|++|+++||+||+.... ....+|.+||++.|++....
T Consensus 93 NHDig~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~ 162 (257)
T cd08163 93 NHDIGFGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS 162 (257)
T ss_pred CcccCCCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC
Confidence 999853321 123455666662 2368999999999999995321 23568999999999875432
Q ss_pred CCCEEEEEeCCCCccCCCCCCc---hh------------H-HH-HHHHHHHHHHcCCcEEEEccccCceeee
Q 009637 362 VTPWLVATWHPPWYSSYSSHYR---EA------------E-CM-RVEMEALLYSYGVDIVFNGHVHAYERSN 416 (530)
Q Consensus 362 ~~pwvIv~~H~P~y~s~~~~~~---~~------------~-~~-r~~l~~ll~k~~VdlvlsGH~H~yeR~~ 416 (530)
.| +|++.|+|+|.......+ +. + .+ .+.-..||.+.+..+||+||+|.|=...
T Consensus 163 -~p-~ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 163 -KP-RILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred -Cc-EEEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 33 899999999865321100 00 0 11 2444578888899999999999987654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.4e-15 Score=146.91 Aligned_cols=191 Identities=17% Similarity=0.203 Sum_probs=117.2
Q ss_pred EEEEccCCCCC-----------ChHHHHHHHHhC------CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 201 IAIVGDLGLTY-----------NTTCTINHMSSN------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 201 f~v~gD~g~~~-----------~~~~~~~~l~~~------~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
|.+++|+|... +..+.++++.+. +||+|+++||+++. +.
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~------------------ 56 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK------------------ 56 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC------------------
Confidence 35788998762 123455555544 99999999999842 11
Q ss_pred hHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccccc-CC
Q 009637 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS-YD 342 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~-~~ 342 (530)
........+.++.+ ..|+++|+||||+... ....+...+. .. +..-....++.++++.|+.++.... +.
T Consensus 57 ~~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 57 LEEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred hHHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 01222233344433 3578999999998421 1222222221 00 0000012345667899998763211 00
Q ss_pred ----------------CCHHHHHHHHHHHhcccCCC-CCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 009637 343 ----------------KSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (530)
Q Consensus 343 ----------------~~~~Q~~WL~~~L~~~~r~~-~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~Vdlvl 405 (530)
...+|++||++.|+++.... ..++|++.|+|++..... .+.+..++.+++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 13569999999999864322 246899999998764321 23567888999999999
Q ss_pred EccccCceeeeecccCccCCCCcEEEEeCCC
Q 009637 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 406 sGH~H~yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
+||+|.+++..|... .-+|+.|+++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999998776522 2367777766554
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.4e-15 Score=140.25 Aligned_cols=168 Identities=18% Similarity=0.193 Sum_probs=102.4
Q ss_pred EEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhc
Q 009637 201 IAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSK 280 (530)
Q Consensus 201 f~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~ 280 (530)
|+++||+|........ ..+.+.++|+||++||+++. +. ......+ +.++. .+
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~------------------~~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GG------------------KEAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CC------------------HHHHHHH-HHHHh--cC
Confidence 5789999986433222 34556789999999999952 22 0111112 33433 37
Q ss_pred CCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccccc------CCCCHHHHHHHHHH
Q 009637 281 VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS------YDKSGHQYKWLEKD 354 (530)
Q Consensus 281 vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~------~~~~~~Q~~WL~~~ 354 (530)
+|+++++||||.... ......... ... -..+.+++++|+.+++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~~-------~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAGL-------NLH--GKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCcE-------ecC--CCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997411 111000000 001 1245678899999987422 12367899998 45
Q ss_pred HhcccCCCCCEEEEEeCCCCccCC-CCCCchhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 355 LANVDRSVTPWLVATWHPPWYSSY-SSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 355 L~~~~r~~~pwvIv~~H~P~y~s~-~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
|+.. ..+.+|++.|+|++... ...........+.+.+++++++++++|+||+|.-..
T Consensus 118 l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~ 175 (188)
T cd07392 118 LNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESRG 175 (188)
T ss_pred hhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEeccccccc
Confidence 5442 22347888898887631 111111112346788999999999999999998643
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.7e-15 Score=144.02 Aligned_cols=150 Identities=21% Similarity=0.243 Sum_probs=96.4
Q ss_pred CeEEEEEccCCCCCCh------------HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 198 PKRIAIVGDLGLTYNT------------TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~------------~~~~~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
.+||++++|+|..... ...+++ +.+.+||+||++||+++.... . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------c--h
Confidence 4899999999986431 122333 335689999999999964210 0 0
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCC
Q 009637 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343 (530)
Q Consensus 265 ~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~ 343 (530)
..+..+.++++++. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 12334445555553 37999999999990 1123
Q ss_pred CHHHHHHHHHHHhccc--CCCCCEEEEEeCCCCccCCCCC---------Cchh---HHHHHHH-HHHHHHcCCcEEEEcc
Q 009637 344 SGHQYKWLEKDLANVD--RSVTPWLVATWHPPWYSSYSSH---------YREA---ECMRVEM-EALLYSYGVDIVFNGH 408 (530)
Q Consensus 344 ~~~Q~~WL~~~L~~~~--r~~~pwvIv~~H~P~y~s~~~~---------~~~~---~~~r~~l-~~ll~k~~VdlvlsGH 408 (530)
...|++||+++|++.. +....+.++++|+|+....... ..+. ....+.+ ..+.+..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5789999999999863 2234568999999876532111 1110 0112334 4445666899999999
Q ss_pred ccCceeee
Q 009637 409 VHAYERSN 416 (530)
Q Consensus 409 ~H~yeR~~ 416 (530)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=148.31 Aligned_cols=176 Identities=19% Similarity=0.232 Sum_probs=107.5
Q ss_pred EEEEEccCCCCCCh-------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 200 RIAIVGDLGLTYNT-------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 200 rf~v~gD~g~~~~~-------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
||++++|+|..... ...++.+.+.++|+|+++||++.. . .+...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~--------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F--------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h--------------------hhHHHHHH
Confidence 68999999965322 234555667889999999999941 0 01122333
Q ss_pred HHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCC----------
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD---------- 342 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~---------- 342 (530)
.+..+ ..+|++.++||||..... .+..+...+. + ....+.++.+..++++|++++.+.++.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~---~~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDL---TYEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCC---CHHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33332 468999999999985211 1222222110 0 011223344445778999888533320
Q ss_pred ---------------------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCC------CCCchhHH--HHHHHH
Q 009637 343 ---------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS------SHYREAEC--MRVEME 393 (530)
Q Consensus 343 ---------------------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~------~~~~~~~~--~r~~l~ 393 (530)
...+|++||++.|++... .+ +|++.|+|+..... ..+..... ..+.++
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 136789999999988642 22 67777877644211 11111111 247899
Q ss_pred HHHHHcCCcEEEEccccCce
Q 009637 394 ALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 394 ~ll~k~~VdlvlsGH~H~ye 413 (530)
+++++++|+++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999865
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.5e-15 Score=156.07 Aligned_cols=94 Identities=24% Similarity=0.354 Sum_probs=71.7
Q ss_pred CcceEEEE-cCcEEEEEEcccccC-----CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCc-----hhHH
Q 009637 319 SSFYYSFN-AGGIHFIMLGAYISY-----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-----EAEC 387 (530)
Q Consensus 319 ~~~yYsf~-~G~v~fI~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~-----~~~~ 387 (530)
+..||+|+ .++++||+|||.... ...++|++||+++|++. ..+++||++|||++.......+ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996431 23799999999999974 3356999999998765432111 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEEccccCceee
Q 009637 388 MRVEMEALLYSY-GVDIVFNGHVHAYERS 415 (530)
Q Consensus 388 ~r~~l~~ll~k~-~VdlvlsGH~H~yeR~ 415 (530)
..++|.++|.+| +|.++|+||+|.-...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 356899999999 7999999999987644
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.1e-14 Score=141.57 Aligned_cols=179 Identities=26% Similarity=0.356 Sum_probs=119.5
Q ss_pred eEEEEEccCCCC--CC-h----HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHH
Q 009637 199 KRIAIVGDLGLT--YN-T----TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (530)
Q Consensus 199 ~rf~v~gD~g~~--~~-~----~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~ 271 (530)
+||++++|.|.. .. . .++++.+...+||+|+++||+++. |. ....+...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999987 22 2 234566666789999999999952 32 23345556
Q ss_pred HHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEc-CcEEEEEEcccccC----CCCHH
Q 009637 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY----DKSGH 346 (530)
Q Consensus 272 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~~----~~~~~ 346 (530)
++++.+....|++++|||||.... ....+...+.... ..+..... ++++++.+|+.... .....
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVV----NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCch----HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 667755568899999999998642 2223333331110 11111222 67899999996542 34799
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCc
Q 009637 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 412 (530)
Q Consensus 347 Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~y 412 (530)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999986433112468888888776543333332233456777888888 999999999986
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.5e-14 Score=126.65 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=92.2
Q ss_pred EEEEccCCCCCChH-----------HHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHH
Q 009637 201 IAIVGDLGLTYNTT-----------CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 269 (530)
Q Consensus 201 f~v~gD~g~~~~~~-----------~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~ 269 (530)
|++++|+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999864321 13444556799999999999963 22 345677
Q ss_pred HHHHHHHhhhc-CCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHH
Q 009637 270 WGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348 (530)
Q Consensus 270 ~~~~l~~l~~~-vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~ 348 (530)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77788887544 699999999996
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCc
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 428 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~ 428 (530)
|+++|+|++.......... ..++.+.+++.+++++++++||+|......-. ...+++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCE
Confidence 7777888766533211111 14567999999999999999999997654311 124567
Q ss_pred EEEEeCC
Q 009637 429 VHITIGD 435 (530)
Q Consensus 429 vyIv~G~ 435 (530)
+++.+|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 7777664
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=131.23 Aligned_cols=187 Identities=20% Similarity=0.215 Sum_probs=113.5
Q ss_pred CeEEEEEccCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-----~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.. . ... +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~------------------~~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------V------------------DVL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------c------------------hhh-HHHHH
Confidence 479999999998643 23456666778999999999999531 1 000 34556
Q ss_pred HHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHH
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~ 352 (530)
.++.+....|++.++||||....... .+........+. -..+.+..++.++..+..+.-. ......+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~----~~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVD----DGLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEecc----CccccCCCHH
Confidence 66777677999999999998643211 101122111111 1123345566666544443211 1112335666
Q ss_pred HHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc----------
Q 009637 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT---------- 422 (530)
Q Consensus 353 ~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~---------- 422 (530)
+.+++.+. ....|++.|.|.+.. .+.+.++|++++||+|..+...|.....
T Consensus 126 ~~~~~~~~--~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLDE--DDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCCC--CCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 77766532 345899999985421 1156799999999999999776543210
Q ss_pred ----cCCCCcEEEEeCCCcc
Q 009637 423 ----LDPCGPVHITIGDGGN 438 (530)
Q Consensus 423 ----~~~~G~vyIv~G~gG~ 438 (530)
...+..+||..|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 0234577787777765
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-13 Score=128.07 Aligned_cols=145 Identities=20% Similarity=0.285 Sum_probs=88.5
Q ss_pred EEEEccCCCCCChHHHH--HHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhh
Q 009637 201 IAIVGDLGLTYNTTCTI--NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (530)
Q Consensus 201 f~v~gD~g~~~~~~~~~--~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~ 278 (530)
|+++||+|......... +.+.+.++|+++++||+++. +. ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHHHH---HHHhhc
Confidence 57899999875432221 23345689999999999952 11 111211 233345
Q ss_pred hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCC-CHHHHHHHHHHHhc
Q 009637 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK-SGHQYKWLEKDLAN 357 (530)
Q Consensus 279 ~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~-~~~Q~~WL~~~L~~ 357 (530)
...|+++++||||.. +.|+...-+.++.. ..++++|+.+++++
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~~ 97 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFRG 97 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCCC
Confidence 678999999999984 22232222222221 23455666665551
Q ss_pred ccCCCCCEEEEEeCCCCccCCCCCC---c-hhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 358 VDRSVTPWLVATWHPPWYSSYSSHY---R-EAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 358 ~~r~~~pwvIv~~H~P~y~s~~~~~---~-~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
.+|++.|+|++....... . .....++.+.+++++++|+++++||+|.....
T Consensus 98 -------~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 98 -------KTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred -------CEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 278888888776532221 1 11234566778888999999999999987543
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.4e-12 Score=124.25 Aligned_cols=172 Identities=13% Similarity=0.167 Sum_probs=103.1
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
+.||++++|+|..... .+.++.+.+.++|+|+++||+++. |. ..+.+.++++.
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~--------------------~~~~~~~~l~~ 57 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AA--------------------KSEDYAAFFRI 57 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CC--------------------CHHHHHHHHHH
Confidence 6799999999975332 334444455789999999999952 21 01223344444
Q ss_pred hh-hcCCeEEccCCccccccccccchHHHhhhcC----CCCCCCCCCCcceEEEEc-CcEEEEEEcccccC--CCCHHHH
Q 009637 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY--DKSGHQY 348 (530)
Q Consensus 277 l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsf~~-G~v~fI~Ldt~~~~--~~~~~Q~ 348 (530)
+. ..+|+++++||||... .......|. +|..- ..... ...+ |+++|+.|+....+ ..+++|.
T Consensus 58 l~~l~~pv~~V~GNhD~~v------~~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 58 LGEAHLPTFYVPGPQDAPL------WEYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred HHhcCCceEEEcCCCChHH------HHHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 42 2589999999999620 111111221 12210 01111 2334 56999999875433 3356652
Q ss_pred ----HHHHH-HHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEcccc
Q 009637 349 ----KWLEK-DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410 (530)
Q Consensus 349 ----~WL~~-~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 410 (530)
+||.+ .|+...+...+..|+++|.|+|.....|- -...+.+++++++..+++|||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 56533 22222111233589999999998743232 23577889999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=127.40 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=106.4
Q ss_pred EEEEEccCCCCCCh----------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 200 RIAIVGDLGLTYNT----------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 200 rf~v~gD~g~~~~~----------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
||++++|+|.+... ..+++.+.+.+||+|+++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999986421 33344555679999999999985311 00
Q ss_pred hHHHHHHHHHHHHhh-hcCCeEEccCCccccccccccchHHHhhhcCCCCC--CCCCCCcceEEEEcCcEEEEEEccccc
Q 009637 264 QPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE--ESGSLSSFYYSFNAGGIHFIMLGAYIS 340 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~--~~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (530)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........++.+++.|+.++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 123556666776664 58999999999998643211 1111111000000 000011223334455688888875422
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 341 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 341 ~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
. ....+.+++++.+.+.. .....|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12334455555555543 33458999999976543221110 123344566789999999999987653
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.5e-12 Score=133.16 Aligned_cols=94 Identities=19% Similarity=0.234 Sum_probs=67.8
Q ss_pred CcceEEEE-cCcE--EEEEEccccc-----------CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC--
Q 009637 319 SSFYYSFN-AGGI--HFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-- 382 (530)
Q Consensus 319 ~~~yYsf~-~G~v--~fI~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~-- 382 (530)
+..||+|+ .|++ |+|+||+... ...+.+|++||+++|+.+.. +.+++|+++|+|+.+......
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 6855 9999998641 11369999999999998753 457899999999876322111
Q ss_pred -c----------hhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 009637 383 -R----------EAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (530)
Q Consensus 383 -~----------~~~~~r~~l~~ll~k~-~VdlvlsGH~H~ye 413 (530)
. +......+|.++|.+| +|.++||||.|.-.
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~ 412 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNT 412 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccccc
Confidence 0 0001124799999999 69999999999643
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.5e-12 Score=126.01 Aligned_cols=164 Identities=16% Similarity=0.144 Sum_probs=97.4
Q ss_pred CeEEEEEccCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-----~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
++||++++|+|.... ..+.++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 23455666678999999999998521 1 012345667
Q ss_pred HHHHhhhcCCeEEccCCcccccccc-ccchHHHhhhcCCCCCCCCCCCcceEEEEcCc--EEEEEEcccccCCCCHHHHH
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGG--IHFIMLGAYISYDKSGHQYK 349 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~--v~fI~Ldt~~~~~~~~~Q~~ 349 (530)
.++.+.+..|+++++||||+..... ...+....+.-.+ .-..+....+..++ +.++.++........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 7777777789999999999853211 1112222211110 01123344555543 566677532111111
Q ss_pred HHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeec
Q 009637 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 418 (530)
Q Consensus 350 WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv 418 (530)
..+.+++ +. ..|++.|.|-+- +.+.+.++|++||||+|.-|...|.
T Consensus 175 -~~~~~~~----~~-~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----NL-PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----CC-CeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1112222 22 478899999531 1234578999999999998876553
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.1e-12 Score=101.66 Aligned_cols=58 Identities=31% Similarity=0.512 Sum_probs=35.8
Q ss_pred CCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecCCcceEEEEEe
Q 009637 426 CGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVL 505 (530)
Q Consensus 426 ~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~ 505 (530)
.|||||++|+||+ ++.. .+.++|+||++|..+|||++|+|.
T Consensus 1 kapVhiv~G~aG~--~l~~-------------------------------------~~~~~~~wsa~r~~~~Gy~~l~v~ 41 (62)
T PF14008_consen 1 KAPVHIVVGAAGN--GLDP-------------------------------------FPYPPPEWSAFRDSEYGYGRLTVA 41 (62)
T ss_dssp TS-EEEEE--S-T-------------------------------------------B-SS--TTEEEEE---EEEEEEE-
T ss_pred CCCEEEEECcCCC--Cccc-------------------------------------ccCCCCCeeeeeccccCEEEEEEE
Confidence 4899999999999 3321 224679999999999999999999
Q ss_pred ecceeeeeeeeccCCCce
Q 009637 506 SLSLLFVPLFLQPKFNTM 523 (530)
Q Consensus 506 n~t~~~~~~~~~~~~~~~ 523 (530)
|.|||+||++.+.+ ++|
T Consensus 42 N~T~l~~e~i~~~~-g~v 58 (62)
T PF14008_consen 42 NATHLHWEFIRSDD-GSV 58 (62)
T ss_dssp SSSEEEEEEEETTS--T-
T ss_pred cCCeEEEEEEECCC-CcE
Confidence 99999998887653 443
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.9e-11 Score=106.93 Aligned_cols=128 Identities=29% Similarity=0.479 Sum_probs=87.6
Q ss_pred EEEccCCCCCChHHHH---HHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhh
Q 009637 202 AIVGDLGLTYNTTCTI---NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (530)
Q Consensus 202 ~v~gD~g~~~~~~~~~---~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~ 278 (530)
+++||+|......... ....+.++|+|+++||+++. +. ...+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~------------------~~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GP------------------DPEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CC------------------CchHHHHHHHHHhhc
Confidence 4689999875443332 34456799999999999963 11 011222222333446
Q ss_pred hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcc
Q 009637 279 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358 (530)
Q Consensus 279 ~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~ 358 (530)
...|+++++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 7899999999999
Q ss_pred cCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeC
Q 009637 359 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434 (530)
Q Consensus 359 ~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G 434 (530)
|++.|.|++.............+..+..++.+.+++++|+||.|.+.+... ...+..++..|
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~------~~~~~~~v~~g 131 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERREP------DGGGTLYINPG 131 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeeccccccC------CCCceEEecCC
Confidence 889999987764432222222578889999999999999999999998752 23455555443
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.9e-10 Score=111.97 Aligned_cols=211 Identities=23% Similarity=0.306 Sum_probs=119.2
Q ss_pred CeEEEEEccCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCC
Q 009637 198 PKRIAIVGDLGLTYN--------------------TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--------------------~~~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~ 256 (530)
+|||+.++|+|.+.. +...++++. .++||||+++||++++...
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t---------------- 116 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST---------------- 116 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc----------------
Confidence 699999999997632 234466654 5799999999999974210
Q ss_pred CCccccchHHHHHHHHHHHHh-hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCC---CCCcceEEEEcCc---
Q 009637 257 TPIHETYQPRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG---SLSSFYYSFNAGG--- 329 (530)
Q Consensus 257 ~~~~~~y~~~wd~~~~~l~~l-~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~---~~~~~yYsf~~G~--- 329 (530)
+..-..+.+.++|. ..++||.++.||||-+..........+... +|..-+. ..+..+--..+|+
T Consensus 117 -------~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~ 187 (379)
T KOG1432|consen 117 -------QDAATSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNL 187 (379)
T ss_pred -------HhHHHHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceEE
Confidence 11113345666664 689999999999998755433333333332 2322110 0111111111221
Q ss_pred ---------------EEEEEEccccc---------CC-CCHHHHHHHHHHHhc---ccCCCCC-EEEEEeCCCCc--cCC
Q 009637 330 ---------------IHFIMLGAYIS---------YD-KSGHQYKWLEKDLAN---VDRSVTP-WLVATWHPPWY--SSY 378 (530)
Q Consensus 330 ---------------v~fI~Ldt~~~---------~~-~~~~Q~~WL~~~L~~---~~r~~~p-wvIv~~H~P~y--~s~ 378 (530)
..++.||+..+ |+ ....|.+||+..-++ .+..-.| --++++|.|+- ...
T Consensus 188 ~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~ 267 (379)
T KOG1432|consen 188 QIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLEL 267 (379)
T ss_pred EeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhc
Confidence 12344554321 11 267899999987732 1112223 36888999852 221
Q ss_pred CC------CCchh---HHHHHHHHHHHH-HcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcccc
Q 009637 379 SS------HYREA---ECMRVEMEALLY-SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 440 (530)
Q Consensus 379 ~~------~~~~~---~~~r~~l~~ll~-k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e 440 (530)
.. ..++. ......+...|. ..+|++|++||+|.-.--.+. .|.+++.=|+|+..-
T Consensus 268 ~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGyg 332 (379)
T KOG1432|consen 268 ESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYG 332 (379)
T ss_pred cCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccC
Confidence 11 11111 112245556666 778999999999986554432 455777777665543
|
|
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-10 Score=111.19 Aligned_cols=178 Identities=20% Similarity=0.212 Sum_probs=111.4
Q ss_pred EEEEEccCCCCCChHHHHHHHH----hCCCCEEEEcCccccccccccCCCCCc--ccccCCCCCCccccchHHHHHHH--
Q 009637 200 RIAIVGDLGLTYNTTCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSD--CYSCSFSKTPIHETYQPRWDYWG-- 271 (530)
Q Consensus 200 rf~v~gD~g~~~~~~~~~~~l~----~~~pDfvl~~GDl~Yad~~~~~G~~~~--cy~~~~~~~~~~~~y~~~wd~~~-- 271 (530)
||++.+|.+...........+. +.+||++|++||.+|+|.......... --..........+.|..++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5888999887755555555554 789999999999999875211100000 00000001122344555555442
Q ss_pred HHHHHhhhcCCeEEccCCccccccccc----------------cchHHHhhhcCCCCCCCC--CCCcceEEEEcCcE-EE
Q 009637 272 RFMQNLVSKVPIMVVEGNHEIEAQAGN----------------QTFVAYSSRFAFPSEESG--SLSSFYYSFNAGGI-HF 332 (530)
Q Consensus 272 ~~l~~l~~~vP~~~v~GNHD~~~~~~~----------------~~f~~y~~~f~~P~~~~~--~~~~~yYsf~~G~v-~f 332 (530)
..++.+.+.+|++.++.+||+..+.+. .....|......+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 346777889999999999999876443 122345544444433222 34678999999986 99
Q ss_pred EEEcccccCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEcccc
Q 009637 333 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVH 410 (530)
Q Consensus 333 I~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H 410 (530)
++||+.... ..+......|+++..++.+.+ --++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998654 233334456777777765553 3488999999
Q ss_pred Cceee
Q 009637 411 AYERS 415 (530)
Q Consensus 411 ~yeR~ 415 (530)
..+..
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 76654
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.21 E-value=6.1e-10 Score=108.93 Aligned_cols=195 Identities=20% Similarity=0.215 Sum_probs=102.8
Q ss_pred eEEEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhh
Q 009637 199 KRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 278 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~ 278 (530)
+||+++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976443 23456667799999999999831 0 1122333333
Q ss_pred hcCCeEEccCCccccccccc-cchHHHhhhcCCCCCCCCCCCcceEE---EEcCcEEEEEEcccc---------------
Q 009637 279 SKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYS---FNAGGIHFIMLGAYI--------------- 339 (530)
Q Consensus 279 ~~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYs---f~~G~v~fI~Ldt~~--------------- 339 (530)
..|++++.||||....... .....+......-. ..... .++....+.++.+.-
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~lg-------~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLELLG-------DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHHhC-------CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 4799999999998643211 01223333332111 11111 112221222222210
Q ss_pred -cC--CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCC-------------CchhHHHHHHHHHHHHHcCCcE
Q 009637 340 -SY--DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH-------------YREAECMRVEMEALLYSYGVDI 403 (530)
Q Consensus 340 -~~--~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~-------------~~~~~~~r~~l~~ll~k~~Vdl 403 (530)
.| ....+-++.+-+.++.++... + .|++.|.++....+.. ......+++++..+-..-.+++
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~~~-~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPPDL-P-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCCCC-C-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 01 112333444555554433232 2 6888999886653111 1123356666655543345899
Q ss_pred EEEccccCceeeee-cc-cCccCCCCcEEEEeC
Q 009637 404 VFNGHVHAYERSNR-VF-NYTLDPCGPVHITIG 434 (530)
Q Consensus 404 vlsGH~H~yeR~~p-v~-~~~~~~~G~vyIv~G 434 (530)
+++||+|.--|... .. ....+.+|++|+..+
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 99999997633221 00 012367899999543
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=103.59 Aligned_cols=133 Identities=18% Similarity=0.214 Sum_probs=81.1
Q ss_pred EEEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhh
Q 009637 200 RIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (530)
Q Consensus 200 rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~ 279 (530)
||+++||+|.... .+...++|+++++||++.. +. ...++.+.+.++.+
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~-- 48 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSL-- 48 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhC--
Confidence 5899999997644 2344689999999999842 21 12234444555544
Q ss_pred cCC-eEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcc
Q 009637 280 KVP-IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 358 (530)
Q Consensus 280 ~vP-~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~ 358 (530)
..| ++.++||||....
T Consensus 49 ~~~~~~~v~GNHD~~~~--------------------------------------------------------------- 65 (135)
T cd07379 49 PHPHKIVIAGNHDLTLD--------------------------------------------------------------- 65 (135)
T ss_pred CCCeEEEEECCCCCcCC---------------------------------------------------------------
Confidence 233 5789999996310
Q ss_pred cCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEe
Q 009637 359 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433 (530)
Q Consensus 359 ~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~ 433 (530)
..+ +.|++.|.|++............-.+.+.+++.+++++++++||+|........ -....++++|..
T Consensus 66 -~~~--~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~---~~~~~~t~~in~ 134 (135)
T cd07379 66 -PED--TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAERV---LDTDGETLFVNA 134 (135)
T ss_pred -CCC--CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcCceeEe---cccCCCEEEEeC
Confidence 112 367888998876532211111112245677788899999999999987422100 001356777654
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.6e-10 Score=100.43 Aligned_cols=139 Identities=24% Similarity=0.368 Sum_probs=82.1
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+||+++||+|..... .+.++.+ +++|+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986332 3455555 579999999999831 2333344433
Q ss_pred hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhc
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (530)
|++++.||||.. .+....... + +. ..
T Consensus 49 ----~~~~v~GNHD~~---------~~~~~~~~~----------~----------------------------~~---~~ 74 (156)
T PF12850_consen 49 ----PVYVVRGNHDNW---------AFPNENDEE----------Y----------------------------LL---DA 74 (156)
T ss_dssp ----EEEEE--CCHST---------HHHSEECTC----------S----------------------------SH---SE
T ss_pred ----CEEEEeCCcccc---------cchhhhhcc----------c----------------------------cc---cc
Confidence 899999999953 121111000 0 00 00
Q ss_pred ccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCc
Q 009637 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (530)
Q Consensus 358 ~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG 437 (530)
.........|++.|...+.... ..+.+..++...+++++++||.|...... .+|+.++..|+-+
T Consensus 75 ~~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 75 LRLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp EEEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred eeeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 0001123478888876655321 12345677789999999999999987764 3688899988876
Q ss_pred cc
Q 009637 438 NL 439 (530)
Q Consensus 438 ~~ 439 (530)
..
T Consensus 139 ~~ 140 (156)
T PF12850_consen 139 GP 140 (156)
T ss_dssp S-
T ss_pred CC
Confidence 64
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=1e-09 Score=110.71 Aligned_cols=74 Identities=22% Similarity=0.322 Sum_probs=57.0
Q ss_pred CeEEEEEccCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~---~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
++||+.++|+|..... .+.+.++....||+|+++||+++.+ . .+.+..+.+.+
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~-----~-------------------~~~~~~~~~~L 99 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD-----R-------------------PPGVAALALFL 99 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC-----C-------------------CCCHHHHHHHH
Confidence 6899999999987554 3345555567889999999999621 0 12346677888
Q ss_pred HHhhhcCCeEEccCCcccccc
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQ 295 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~ 295 (530)
+++.+..+++++.||||+...
T Consensus 100 ~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 100 AKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred HhhhccCCEEEEecccccccc
Confidence 999999999999999999754
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.3e-09 Score=104.94 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=104.3
Q ss_pred eEEEEEccCCCCCChH----HHHHHHH--hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNTT----CTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~~----~~~~~l~--~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
+|+++++|+|.+.... ..++.+. +.++|+|+++||+++. + .|... ..+......+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~~---------------~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDDD---------------PSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccCc---------------CCHHHHHHHH
Confidence 4899999999875432 2333332 3589999999999942 1 11100 0112234556
Q ss_pred HHHHhhhc-CCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHH
Q 009637 273 FMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 351 (530)
Q Consensus 273 ~l~~l~~~-vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL 351 (530)
.++.+... +|++.++||||.... ..+.+...+. .-.....++.++.+++..-.... ...+..++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~------~l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMT------LLPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCE------EeCCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 66666544 899999999997421 1222222110 00123346777777776654321 1233445555
Q ss_pred HHHHhcccCCCCCEEEEEeCCCCccCCC----------------CCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 352 EKDLANVDRSVTPWLVATWHPPWYSSYS----------------SHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 352 ~~~L~~~~r~~~pwvIv~~H~P~y~s~~----------------~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
++.+.+. |....+|.+++.... ....-.....+.+.+++.+++++++++||+|.-...
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 202 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIH 202 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCccee
Confidence 4444431 122222222221100 000000011246778889999999999999986543
Q ss_pred eecccCccCCCCcEEEEeCCCcc
Q 009637 416 NRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 416 ~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
. +.+ +..+..|++.|+...
T Consensus 203 ~-~~~---~~~~~~~~~lgdw~~ 221 (241)
T PRK05340 203 Q-LQA---GGQPATRIVLGDWHE 221 (241)
T ss_pred e-ccC---CCcceEEEEeCCCCC
Confidence 2 100 111247898898743
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.2e-08 Score=92.43 Aligned_cols=37 Identities=24% Similarity=0.363 Sum_probs=27.5
Q ss_pred eEEEEEccCCCCCChHH-HHHHHHhC-CCCEEEEcCccc
Q 009637 199 KRIAIVGDLGLTYNTTC-TINHMSSN-EPDLVLLVGDVT 235 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~~~-~~~~l~~~-~pDfvl~~GDl~ 235 (530)
+|++++||+|......+ .++.+... ++|.|+++||++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~ 39 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT 39 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC
Confidence 58999999997644323 33444455 899999999997
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.91 E-value=8e-09 Score=98.07 Aligned_cols=110 Identities=17% Similarity=0.341 Sum_probs=70.3
Q ss_pred HhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh---hhcCCeEEccCCcccccccc
Q 009637 221 SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQAG 297 (530)
Q Consensus 221 ~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l---~~~vP~~~v~GNHD~~~~~~ 297 (530)
...+||+|+++||+++. |.... ..+|.+..+-+.++ ...+|++.++||||+.....
T Consensus 39 ~~l~PD~Vi~lGDL~D~------G~~~~---------------~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~ 97 (195)
T cd08166 39 NFVQPDIVIFLGDLMDE------GSIAN---------------DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE 97 (195)
T ss_pred hccCCCEEEEeccccCC------CCCCC---------------HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC
Confidence 44689999999999953 33110 22343333233333 35689999999999974322
Q ss_pred ccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccC
Q 009637 298 NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSS 377 (530)
Q Consensus 298 ~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s 377 (530)
... ..-..||. .+| |++.|.|....
T Consensus 98 ~~~-~~~v~RF~-----------~~F-------------------------------------------i~lsH~P~~~~ 122 (195)
T cd08166 98 DPI-ESKIRRFE-----------KYF-------------------------------------------IMLSHVPLLAE 122 (195)
T ss_pred CcC-HHHHHHHH-----------Hhh-------------------------------------------eeeeccccccc
Confidence 111 22334441 011 89999998653
Q ss_pred CCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 009637 378 YSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (530)
Q Consensus 378 ~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~ 416 (530)
.. ..+..++.++.++++|+||.|.+.+..
T Consensus 123 ~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 123 GG----------QALKHVVTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred cc----------HHHHHHHHhcCceEEEEcCccceeeEE
Confidence 21 256778889999999999999987653
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-08 Score=105.34 Aligned_cols=179 Identities=18% Similarity=0.289 Sum_probs=107.2
Q ss_pred HHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccc
Q 009637 215 CTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 292 (530)
Q Consensus 215 ~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~ 292 (530)
+++++|.++ ++|+|+++||++-.+.|.. ..+.--.......+.|.+....+|++++.||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~----------------t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQ----------------TEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhh----------------hHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 456677654 4899999999996543210 0010111223344556677789999999999998
Q ss_pred ccccc-------cc-----chHHHhhhc--CCCCCCC-CCCCcceEEEE-cCcEEEEEEcccccC----------CCCHH
Q 009637 293 EAQAG-------NQ-----TFVAYSSRF--AFPSEES-GSLSSFYYSFN-AGGIHFIMLGAYISY----------DKSGH 346 (530)
Q Consensus 293 ~~~~~-------~~-----~f~~y~~~f--~~P~~~~-~~~~~~yYsf~-~G~v~fI~Ldt~~~~----------~~~~~ 346 (530)
..... .. .+..+...+ .+|.+.. ....+.||.-. .+|.++|+||+..-+ .....
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 74311 11 112222222 1343221 22345566544 689999999985432 23678
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcC--CcEEEEccccCceee
Q 009637 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERS 415 (530)
Q Consensus 347 Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~yeR~ 415 (530)
|++|+..+|.++..++.. |-+++|.|.-.. ... +.....+-.++.++. +...|.||.|.-+-.
T Consensus 343 ~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEK-VHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HhhHHHHHHHHHHhcCCE-EEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 899999999987644443 778899997431 111 112234455566663 556799999986644
|
|
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-08 Score=94.44 Aligned_cols=52 Identities=31% Similarity=0.560 Sum_probs=33.6
Q ss_pred HhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh-h--hcCCeEEccCCcccc
Q 009637 221 SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL-V--SKVPIMVVEGNHEIE 293 (530)
Q Consensus 221 ~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l-~--~~vP~~~v~GNHD~~ 293 (530)
.+.+||+|+++||++.. +... . ...|..+...+..+ . ..+|++.++||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~~--------------~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKWS--------------T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCC------CccC--------------C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 35699999999999953 1100 0 13454443333333 2 258999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=3e-07 Score=86.75 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=30.0
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 391 ~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
.+..++.+.++|++++||+|...... .+|.++|..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 34455667889999999999765432 26889999998774
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=89.78 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=31.8
Q ss_pred EEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 366 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
.|++.|+|++...... .....-.+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 4677777766433211 001112456778888999999999999976554
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.3e-08 Score=92.67 Aligned_cols=49 Identities=20% Similarity=0.197 Sum_probs=33.5
Q ss_pred EEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCc
Q 009637 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (530)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG 437 (530)
|++.|.|.+. ++.+.+++++|+||+|.+-+...-+ ....+.-|++.+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~~~~----~~~~~~ei~v~S~s 167 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVVHSS----KAGSVREITVKSFS 167 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEEecC----CCCCceEEeeccch
Confidence 8999999631 6677899999999999986664311 12345556655543
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-08 Score=92.78 Aligned_cols=57 Identities=19% Similarity=0.131 Sum_probs=38.9
Q ss_pred EEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccc
Q 009637 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 366 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~ 439 (530)
.|++.|.+....... . + . ..++.+.++|++++||+|...... .+|+++|..|+.|..
T Consensus 77 ~i~v~Hg~~~~~~~~----~---~-~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~ 133 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L---D-R-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSLP 133 (155)
T ss_pred EEEEECCcccccccc----h---h-h-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccCc
Confidence 677788776543211 0 1 1 455677899999999999865432 268899999987763
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.9e-07 Score=91.89 Aligned_cols=185 Identities=15% Similarity=0.184 Sum_probs=96.8
Q ss_pred EEEccCCCCCCh----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 202 AIVGDLGLTYNT----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 202 ~v~gD~g~~~~~----~~~~~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
++++|+|.+... ...++.+.+ .+||+|+++||+++ .+. |.. . . ......+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~-----------~-~---~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDD-----------D-P---STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCC-----------C-C---CHHHHHHHHHHH
Confidence 689999987532 234555544 37999999999994 221 110 0 0 111234555666
Q ss_pred Hhhh-cCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC--CC---------
Q 009637 276 NLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--DK--------- 343 (530)
Q Consensus 276 ~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~--~~--------- 343 (530)
.+.. .+|+++++||||.... ..+.....+.- -.....+..++.+++++-..... +.
T Consensus 63 ~L~~~~~~v~~v~GNHD~~~~------~~~~~~~gi~~------l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~ 130 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFLIG------KRFAREAGMTL------LPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKV 130 (231)
T ss_pred HHHHCCCeEEEEcCCCchhhh------HHHHHHCCCEE------ECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHH
Confidence 6654 5899999999997421 11222111100 00112355566555555332110 00
Q ss_pred ------------CHHHHHHHHHHHhcccCCC---CCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEcc
Q 009637 344 ------------SGHQYKWLEKDLANVDRSV---TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 408 (530)
Q Consensus 344 ------------~~~Q~~WL~~~L~~~~r~~---~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH 408 (530)
......||.+.+.+..+++ .+ ..++.+ ..+.+++++.++++|++++||
T Consensus 131 r~~~~~~~~~~l~~~~r~~l~~~~~~~s~~~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~i~GH 193 (231)
T TIGR01854 131 HQPWLQRLFLHLPLAVRVKLARKIRAESRADKQMKS-QDIMDV----------------NPAEVAAVMRRYGVDRLIHGH 193 (231)
T ss_pred hCHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc-chhhCC----------------CHHHHHHHHHHcCCCEEEECC
Confidence 1112344444443321111 00 011111 123567788889999999999
Q ss_pred ccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 409 ~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
+|.-... +..+ +..+..|++.|+.-.
T Consensus 194 tH~~~~~-~~~~---~~~~~~~~~lgdW~~ 219 (231)
T TIGR01854 194 THRPAIH-PLQA---DGQPATRIVLGDWYR 219 (231)
T ss_pred ccCccee-eccc---CCCccEEEEECCCcc
Confidence 9987643 3211 223568999998743
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.2e-07 Score=90.66 Aligned_cols=191 Identities=18% Similarity=0.252 Sum_probs=113.7
Q ss_pred CeEEEEEccCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
.+|+++++|+|.... ..+.++.+...++|+++.+||++|.+ .|... | .-+.. + ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~~-~------------~~~~~---~---~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPKE-V------------AEELN---K---LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCchH-H------------HHhhh---H---HHH
Confidence 589999999998643 34455555667999999999999543 22210 0 00000 1 344
Q ss_pred hh-hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccc------ccCCCCHHH-H
Q 009637 277 LV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY------ISYDKSGHQ-Y 348 (530)
Q Consensus 277 l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~------~~~~~~~~Q-~ 348 (530)
+. ..+|+++++||-|-.. -.. ........ ..+ -+.+.+++.|+.+... +.+...+++ +
T Consensus 60 l~~~~~~v~avpGNcD~~~-----v~~-~l~~~~~~------v~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPE-----VID-VLKNAGVN------VHG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred HHhcCCeEEEEcCCCChHH-----HHH-HHHhcccc------ccc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 43 6899999999987631 111 11111111 011 5577888888886431 111223333 3
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCC
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G 427 (530)
.-|++-+++.+... .|+.+|.|+|......... ...-.+.+.+++++.++-+.+|||+|.+.-.-. -+.
T Consensus 126 s~l~~~v~~~~~~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG~ 195 (226)
T COG2129 126 SKLKSLVKKADNPV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IGN 195 (226)
T ss_pred HHHHHHHhcccCcc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cCC
Confidence 44555555543211 3999999999875442222 122356788899999999999999998544422 145
Q ss_pred cEEEEeCC
Q 009637 428 PVHITIGD 435 (530)
Q Consensus 428 ~vyIv~G~ 435 (530)
++.|..|.
T Consensus 196 TivVNPG~ 203 (226)
T COG2129 196 TIVVNPGP 203 (226)
T ss_pred eEEECCCC
Confidence 66666665
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.79 E-value=1e-07 Score=90.84 Aligned_cols=193 Identities=22% Similarity=0.333 Sum_probs=88.8
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccc-----cCCCCC-Ccc--ccchHH-H
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYS-----CSFSKT-PIH--ETYQPR-W 267 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~-----~~~~~~-~~~--~~y~~~-w 267 (530)
+-|++.++|.+..... .+.+..+.+.+||+|+++||+.-+.. . .+.|. .-.|+. .+. +.|+.. .
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a-----~-~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEA-----R-SDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCH-----H-HHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccch-----h-hhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999998764322 33444455679999999999984311 0 00000 000000 000 011111 2
Q ss_pred HHHHHHHHHhhhcCCeEEccCCccccccccccch--HHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC-CC-
Q 009637 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF--VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DK- 343 (530)
Q Consensus 268 d~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f--~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-~~- 343 (530)
+.+++.+.. ..+|.+++|||||... ..| .+|......|.-- .-..-+.+.-|.+-|+.+..+..- ..
T Consensus 79 ~~ff~~L~~--~~~p~~~vPG~~Dap~----~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 79 DKFFRILGE--LGVPVFVVPGNMDAPE----RFFLREAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHHC--C-SEEEEE--TTS-SH----HHHHHHHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHHh--cCCcEEEecCCCCchH----HHHHHHHhccceecccee---eeeeeecccCCcEEEEecCccccCCCcc
Confidence 244455544 4899999999999742 111 1222222222100 001112334455888888764321 11
Q ss_pred -------CHHHHHHHHHHHhcccCCCCCEEEEEeCCCC-ccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 009637 344 -------SGHQYKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 344 -------~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~-y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~ye 413 (530)
.....+|..+.|..++ ..=+|+++|.|+ +.....+.+ .+.+.+++++|+.++|||||+|.-.
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEecccccch
Confidence 1223455556666653 223788899998 443322222 2578889999999999999999754
|
|
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-07 Score=84.54 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=44.5
Q ss_pred CCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCC
Q 009637 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (530)
Q Consensus 361 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~ 435 (530)
+...-+|||.|.|++++.... ..+.+++++++|+.++.||.|.-.|-.+-.. +-.|+-|+.+.+
T Consensus 156 k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 156 KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEEec
Confidence 334458999999998764321 2466788899999999999999887543222 224777765543
|
|
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.1e-07 Score=91.96 Aligned_cols=197 Identities=17% Similarity=0.193 Sum_probs=99.6
Q ss_pred EEEccCCCCCCh---HHHHHHHHh----CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 202 AIVGDLGLTYNT---TCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 202 ~v~gD~g~~~~~---~~~~~~l~~----~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
++++|+|.+... ......+.+ .++|.++++||++.. +. +... ... ......+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~--~~--~~~~----------~~~---~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDL--WF--GDDE----------VVP---PAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEE--Ee--cCCC----------CCC---hHHHHHHHHHH
Confidence 478999987543 222333332 489999999999942 21 1100 000 01111124445
Q ss_pred HHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHH
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 354 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~ 354 (530)
+.+....+++.++||||.... ..+..+..... .......+.+++.+++++-... ++.....+.|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHH
Confidence 555678999999999998521 11111111100 0111215677888888876542 23344455555543
Q ss_pred HhcccC------CCCCEEEEEeCCCCccC----C--CCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc
Q 009637 355 LANVDR------SVTPWLVATWHPPWYSS----Y--SSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 422 (530)
Q Consensus 355 L~~~~r------~~~pwvIv~~H~P~y~s----~--~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~ 422 (530)
+..... .-..|..-........+ . .......+...+.+..++.+++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 321100 00000000000000000 0 00011122345567777889999999999999876543
Q ss_pred cCCCCcEEEEeCC
Q 009637 423 LDPCGPVHITIGD 435 (530)
Q Consensus 423 ~~~~G~vyIv~G~ 435 (530)
..+..|+++|+
T Consensus 206 --~~~~~~~n~G~ 216 (217)
T cd07398 206 --LDGKLYINLGD 216 (217)
T ss_pred --ECCEEEEECCC
Confidence 24788888886
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.9e-07 Score=86.19 Aligned_cols=75 Identities=20% Similarity=0.360 Sum_probs=46.3
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+|++++||+|..... .++++.+.+.++|.|+++||++.. |. ..+..+.|+ .+...+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~----------~~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GP----------RNPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------Cc----------CCCCccccC--HHHHHHHHHhc
Confidence 589999999965322 334555556799999999999842 11 001111121 12333334332
Q ss_pred hhcCCeEEccCCcccc
Q 009637 278 VSKVPIMVVEGNHEIE 293 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~ 293 (530)
..+++.+.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 46899999999963
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.3e-07 Score=91.05 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=98.3
Q ss_pred eEEEEEccCCCCC-------Ch---HHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCCCCCCccccchHHH
Q 009637 199 KRIAIVGDLGLTY-------NT---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (530)
Q Consensus 199 ~rf~v~gD~g~~~-------~~---~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~w 267 (530)
++|++++|+|... .. ...++++.+.+|| +++.+||++....... + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 4899999999553 11 3456677777788 7899999985321100 0 001
Q ss_pred HHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCC---C----C---CCCCCcceEEEEcCcEEE--EEE
Q 009637 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS---E----E---SGSLSSFYYSFNAGGIHF--IML 335 (530)
Q Consensus 268 d~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~---~----~---~~~~~~~yYsf~~G~v~f--I~L 335 (530)
....+.++.+ -.-++++||||+... ...+.........|. + . .......|.-++.+++++ +.+
T Consensus 60 ~~~~~~l~~~---g~d~~~~GNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL---GYDAVTIGNHEFDYG--LDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc---CCCEEeecccccccc--HHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1222333332 345677899998532 223343433333321 0 0 001123355677787554 444
Q ss_pred cccccCC----------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEE
Q 009637 336 GAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 405 (530)
Q Consensus 336 dt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~Vdlvl 405 (530)
.+..... ......+.+++..++. +.+...+|++.|.+.... ..+.+.+ .+||++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~~------------~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDDD------------EELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccch------------HHHHhcC--CCccEEE
Confidence 4321100 0112233343322222 245667999999876420 1111111 5899999
Q ss_pred EccccCceeeeecccCccCCCCcEEEEeCCC
Q 009637 406 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 406 sGH~H~yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
+||.|....... .-++++.+-+|.=
T Consensus 200 ggH~H~~~~~~~------~~~~~~v~~~g~~ 224 (252)
T cd00845 200 GGHTHHLLEEPE------VVNGTLIVQAGKY 224 (252)
T ss_pred cCCcCcccCCCc------ccCCEEEEeCChh
Confidence 999998654311 1245666655543
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.4e-06 Score=88.09 Aligned_cols=206 Identities=17% Similarity=0.151 Sum_probs=102.6
Q ss_pred eEEEEEccCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCccccccccccCCCCCcccccCCCCCCcc
Q 009637 199 KRIAIVGDLGLTYN-----------------TTCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-----------------~~~~~~~l~~~~pDfvl~-~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
++|++++|+|.... ....++++.+.+|+.+++ +||+....... .+....
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------~~~~~~------ 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLA-------DYYAKI------ 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHH-------HHhhhc------
Confidence 47888888885421 133466666667887776 99998532110 000000
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCC-------C-CCCCCcceEEEEcC-cEE
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------E-SGSLSSFYYSFNAG-GIH 331 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~-~~~~~~~yYsf~~G-~v~ 331 (530)
+ ........+.|+.+ .. -+.++||||+.. +...+........+|-- . .......|.-++.+ +++
T Consensus 68 ~--~~~~~~~~~~ln~~--g~-d~~~lGNHe~d~--g~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~k 140 (277)
T cd07410 68 E--DGDPHPMIAAMNAL--GY-DAGTLGNHEFNY--GLDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVK 140 (277)
T ss_pred c--cCCCChHHHHHHhc--CC-CEEeecccCccc--CHHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCE
Confidence 0 00011233444444 33 366789999853 22334444444433311 0 01112346667888 866
Q ss_pred EEEEc--cccc--C-----------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHH
Q 009637 332 FIMLG--AYIS--Y-----------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (530)
Q Consensus 332 fI~Ld--t~~~--~-----------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (530)
+-++. +... . ....+..++..++|++ .+...+|+++|-.......... ..+.....|.
T Consensus 141 VgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~----~~~~~~~~la 213 (277)
T cd07410 141 VGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL----TGENAAYELA 213 (277)
T ss_pred EEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc----CCccHHHHHH
Confidence 55544 3210 0 0112234444455544 3566799999987654321000 0111223344
Q ss_pred HH-cCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 397 YS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 397 ~k-~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
++ .+||++|+||.|...... .-++++.+-+|.-|.
T Consensus 214 ~~~~~vD~IlgGHsH~~~~~~-------~~~~~~v~q~g~~g~ 249 (277)
T cd07410 214 EEVPGIDAILTGHQHRRFPGP-------TVNGVPVVQPGNWGS 249 (277)
T ss_pred hcCCCCcEEEeCCCccccccC-------CcCCEEEEcCChhhC
Confidence 44 589999999999754321 124555555555444
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.3e-06 Score=84.47 Aligned_cols=191 Identities=15% Similarity=0.113 Sum_probs=98.6
Q ss_pred eEEEEEccCCCCC-----------ChHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCCCCCCccccchHH
Q 009637 199 KRIAIVGDLGLTY-----------NTTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (530)
Q Consensus 199 ~rf~v~gD~g~~~-----------~~~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~ 266 (530)
++|++++|+|.-. .....++++.+.+++ +++.+||++...... . + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-------~-------------~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-------T-------------A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-------h-------------h-cC
Confidence 4677788877211 123456666667788 999999998432110 0 0 01
Q ss_pred HHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCC-------CC---CCCCcceEEEEcCcEEE--EE
Q 009637 267 WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ES---GSLSSFYYSFNAGGIHF--IM 334 (530)
Q Consensus 267 wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~---~~~~~~yYsf~~G~v~f--I~ 334 (530)
.....+.|+.+ . .-+.++||||+... ...+........+|-- .. -.....|.-++.+++++ |.
T Consensus 60 g~~~~~~l~~l--~-~d~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--G-VDLACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--C-CcEEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11223344433 2 23668999998532 2233333333322210 00 01124677788888655 44
Q ss_pred EcccccC------C---CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEE
Q 009637 335 LGAYISY------D---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 404 (530)
Q Consensus 335 Ldt~~~~------~---~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~Vdlv 404 (530)
+.+.... . .-.+-.+.+++.+++..+.+...+|++.|-+... .. ++.++ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceE
Confidence 4432111 0 0122334444444333334567799999987521 11 22233 479999
Q ss_pred EEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 405 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 405 lsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
|+||.|..... ..++++.+-+|.-|.
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~ 225 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFR 225 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcc
Confidence 99999986622 124555555555544
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-07 Score=89.38 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=24.8
Q ss_pred EEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeee
Q 009637 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 416 (530)
Q Consensus 367 Iv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~ 416 (530)
|++.|.|.+- ...+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8899999764 2234589999999999977764
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.54 E-value=7.2e-07 Score=94.35 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=30.4
Q ss_pred CeEEEEEccCCCCCC---------h----HHHHHHHHhCCCCEEEEcCccccc
Q 009637 198 PKRIAIVGDLGLTYN---------T----TCTINHMSSNEPDLVLLVGDVTYA 237 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---------~----~~~~~~l~~~~pDfvl~~GDl~Ya 237 (530)
.+||++++|+|.+.. . ..+++.+.+.++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 589999999998632 1 233444556899999999999954
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.6e-06 Score=90.36 Aligned_cols=74 Identities=23% Similarity=0.373 Sum_probs=50.9
Q ss_pred eEEEEEccCCCCC---C-----------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 199 KRIAIVGDLGLTY---N-----------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 199 ~rf~v~gD~g~~~---~-----------~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
+||++.+|+|.+. + ....++.+.+.++||||++||+.... . |. .
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~------~------------Ps----~ 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTN------N------------PS----P 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCC------C------------CC----H
Confidence 5899999999982 1 12345556678999999999999532 1 00 0
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEccCCccccc
Q 009637 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEA 294 (530)
Q Consensus 265 ~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~ 294 (530)
.--..+.+.++.+. .++|++++.||||...
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 11133455566653 5899999999999864
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.2e-05 Score=80.40 Aligned_cols=188 Identities=18% Similarity=0.216 Sum_probs=100.3
Q ss_pred EEEEccCCCCCChHHHHH---HHHh---CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 201 IAIVGDLGLTYNTTCTIN---HMSS---NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 201 f~v~gD~g~~~~~~~~~~---~l~~---~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
|+|.||.|.. ...+.+ .+.+ .++|++|++||+.-. + +....++. .....|. .+..|.+.+
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~~-------~~p~k~~-~~~~f~~~~ 66 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKCM-------AVPPKYR-KMGDFYKYY 66 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhhh-------ccchhhh-hhhhHHHHh
Confidence 5899999974 333333 3322 469999999999621 1 11111110 0111221 234444444
Q ss_pred HHh-hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceE-----EEEcCcEEEEEEcccc---cCC---
Q 009637 275 QNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYY-----SFNAGGIHFIMLGAYI---SYD--- 342 (530)
Q Consensus 275 ~~l-~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yY-----sf~~G~v~fI~Ldt~~---~~~--- 342 (530)
+.. ...+|+++|.||||... .+ .. ++..+. ...+.+| .+++++++|..|.... ++.
T Consensus 67 ~g~~~~p~~t~fi~GNHE~~~--------~l-~~--l~~gg~-v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~ 134 (262)
T cd00844 67 SGEKKAPILTIFIGGNHEASN--------YL-WE--LPYGGW-VAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGH 134 (262)
T ss_pred cCCccCCeeEEEECCCCCCHH--------HH-Hh--hcCCCe-ecCcEEEecCCCEEEECCeEEEEeccccccccccccc
Confidence 443 25778899999999631 11 11 111110 0123443 3567899999998622 111
Q ss_pred -----CCHHHHHHHH-------HHHhcccCCCCCEEEEEeCCCCccCCCCCCch--------h-------HHHHHHHHHH
Q 009637 343 -----KSGHQYKWLE-------KDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--------A-------ECMRVEMEAL 395 (530)
Q Consensus 343 -----~~~~Q~~WL~-------~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--------~-------~~~r~~l~~l 395 (530)
..+.++..+. +.|.... .+--|+++|.|+.......... . ..-...+..|
T Consensus 135 ~~~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~l 211 (262)
T cd00844 135 FERPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEEL 211 (262)
T ss_pred ccCCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHH
Confidence 1233333211 1122221 1225899999987653211100 0 0112467789
Q ss_pred HHHcCCcEEEEccccC-ceeeee
Q 009637 396 LYSYGVDIVFNGHVHA-YERSNR 417 (530)
Q Consensus 396 l~k~~VdlvlsGH~H~-yeR~~p 417 (530)
+.+.+....|+||.|. |++..|
T Consensus 212 l~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 212 LKHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHHhCCCEEEEecCCcccceecC
Confidence 9999999999999998 776654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.3e-06 Score=81.51 Aligned_cols=178 Identities=16% Similarity=0.182 Sum_probs=90.5
Q ss_pred HHHHHHHhC-CCCEE-EEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccc
Q 009637 215 CTINHMSSN-EPDLV-LLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 292 (530)
Q Consensus 215 ~~~~~l~~~-~pDfv-l~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~ 292 (530)
..++++.+. ++|.+ +.+||+...... . ...+.....+.|+. +++.++.||||+
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-------~--------------~~~~g~~~~~~l~~----~g~da~~GNHef 94 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-------A--------------LYTRGQAMVDALNA----LGVDAMVGHWEF 94 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-------H--------------hhcCChhHHHHHHh----hCCeEEeccccc
Confidence 446666666 89977 579999953210 0 00111222333333 555555599998
Q ss_pred cccccccchHHHhhhcCCCCCCC-------C-CCCcceEEEEcCcEE--EEEEcccccCC--C--------CHHHHHHHH
Q 009637 293 EAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIH--FIMLGAYISYD--K--------SGHQYKWLE 352 (530)
Q Consensus 293 ~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsf~~G~v~--fI~Ldt~~~~~--~--------~~~Q~~WL~ 352 (530)
.. +...+....+...+|--.+ + .....|.-++.++++ ||.+.+..... . .....+.++
T Consensus 95 d~--g~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T cd07411 95 TY--GPERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQ 172 (264)
T ss_pred cc--CHHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHH
Confidence 53 2233444444444332100 0 111235567788754 55555421100 0 122344555
Q ss_pred HHHhccc-CCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCceeeeecccCccCCCCcEE
Q 009637 353 KDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (530)
Q Consensus 353 ~~L~~~~-r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vy 430 (530)
+.+++.. ..+...+|++.|-+... .. .+.++ .+||++|+||.|..... |. ..-++++.
T Consensus 173 ~~~~~~~~~~~~D~iI~l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~v 232 (264)
T cd07411 173 EVVVKLRREEGVDVVVLLSHNGLPV--------DV-------ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTLV 232 (264)
T ss_pred HHHHHHHHhCCCCEEEEEecCCchh--------hH-------HHHhcCCCCcEEEeCcccccccC-cc----cccCCEEE
Confidence 5433321 24567799999987531 11 12222 47999999999974322 11 01256776
Q ss_pred EEeCCCccc
Q 009637 431 ITIGDGGNL 439 (530)
Q Consensus 431 Iv~G~gG~~ 439 (530)
+-+|.-|..
T Consensus 233 ~~~g~~~~~ 241 (264)
T cd07411 233 VEAGSHGKF 241 (264)
T ss_pred EEcCccccE
Confidence 766666553
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.2e-05 Score=80.44 Aligned_cols=182 Identities=20% Similarity=0.195 Sum_probs=91.6
Q ss_pred eEEEEEccCCCCCC--------h---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHH
Q 009637 199 KRIAIVGDLGLTYN--------T---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 267 (530)
Q Consensus 199 ~rf~v~gD~g~~~~--------~---~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~w 267 (530)
++|++++|+|.... . ...++++.+.+.++++.+||++...... . ....
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~-------------------~--~~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS-------------------D--LDKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh-------------------h--hcCC
Confidence 47899999996421 1 2334455444678999999998431100 0 0011
Q ss_pred HHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCC-------CCCC-CCcceEEEEcC-cE--EEEEEc
Q 009637 268 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ESGS-LSSFYYSFNAG-GI--HFIMLG 336 (530)
Q Consensus 268 d~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~~~-~~~~yYsf~~G-~v--~fI~Ld 336 (530)
....+.|+.+ ..-+ .++||||+.. +...+..+.....+|-- +.+. .-..|.-++.+ ++ -||.+-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~--G~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDY--GLDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccC--CHHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1223344433 3344 5679999852 23344444454444431 0010 11224555777 64 455554
Q ss_pred ccc-cC--CC-------CHHHHHHHHHH-HhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEE
Q 009637 337 AYI-SY--DK-------SGHQYKWLEKD-LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 404 (530)
Q Consensus 337 t~~-~~--~~-------~~~Q~~WL~~~-L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~Vdlv 404 (530)
+.. .. .+ -.+-.+-+++. ..+..+.+...+|++.|......... + . ... +..+ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~~~---la~~~~giDvI 205 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----STE---LAANVTGIDLI 205 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----HHH---HHHhCCCceEE
Confidence 421 00 00 01122333333 22222245677999999886543211 1 1 111 2222 489999
Q ss_pred EEccccCceee
Q 009637 405 FNGHVHAYERS 415 (530)
Q Consensus 405 lsGH~H~yeR~ 415 (530)
|.||.|.....
T Consensus 206 igGH~H~~~~~ 216 (257)
T cd07408 206 IDGHSHTTIEI 216 (257)
T ss_pred EeCCCcccccC
Confidence 99999986543
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.5e-05 Score=76.74 Aligned_cols=192 Identities=15% Similarity=0.226 Sum_probs=102.1
Q ss_pred EEEEEccCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 200 RIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 200 rf~v~gD~g~~~~~---~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
||+++||.=..... ...+.++.+ .++||++..||.+-. |... . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~g------g~gl----------------~---~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAG------GKGI----------------T---PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccC------CCCC----------------C---HHHHHHHH
Confidence 58899998544332 233444543 579999999999842 2110 0 12223333
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhhhcC---CCCCC-CCCCCcceEEEEcCcEEEEEEcc--cccCCCCHHHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA---FPSEE-SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYK 349 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~---~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~ 349 (530)
.+ .+-+ ++.|||++... ....+..... .|.+- .......|+-++.+++++-+++- .........-++
T Consensus 56 ~~--G~D~-iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDV-ITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCE-EEecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 33 3444 45599998632 2333333321 11111 11223457778888866555442 211111122234
Q ss_pred HHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcE
Q 009637 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPV 429 (530)
Q Consensus 350 WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~v 429 (530)
-+++.+++.+. +...+||.+|--.. .+ +.++.. ...-+||+++.||+|...-- .++-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t-------sE----k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT-------SE----KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC-------HH----HHHHHH-hCCCCceEEEeCCCCccCCc-----cEEeeCCeE
Confidence 45555555443 46679999997321 11 122321 12336999999999975322 112368999
Q ss_pred EEEe-CCCccccc
Q 009637 430 HITI-GDGGNLEK 441 (530)
Q Consensus 430 yIv~-G~gG~~e~ 441 (530)
||+. |.-|..++
T Consensus 191 ~itd~Gm~G~~~s 203 (255)
T cd07382 191 YITDVGMTGPYDS 203 (255)
T ss_pred EEecCccccCCCc
Confidence 9875 66666544
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.8e-05 Score=80.43 Aligned_cols=85 Identities=14% Similarity=0.094 Sum_probs=46.9
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH--cCCcEEEEccccCceeeeecccCccCCC
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS--YGVDIVFNGHVHAYERSNRVFNYTLDPC 426 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k--~~VdlvlsGH~H~yeR~~pv~~~~~~~~ 426 (530)
+-+++.+++.+..+...+|++.|-.......... .+........++.+ .+||++|+||.|..... +. ..-+
T Consensus 178 e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~ 250 (288)
T cd07412 178 EAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGN 250 (288)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcC
Confidence 4455544444334567799999977543221100 00011122334444 37999999999986542 10 0236
Q ss_pred CcEEEEeCCCcccc
Q 009637 427 GPVHITIGDGGNLE 440 (530)
Q Consensus 427 G~vyIv~G~gG~~e 440 (530)
+++.+-+|+-|..-
T Consensus 251 ~~~v~q~g~~g~~v 264 (288)
T cd07412 251 PRLVTQAGSYGKAV 264 (288)
T ss_pred CEEEEecChhhcee
Confidence 77777777776643
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.8e-05 Score=72.72 Aligned_cols=137 Identities=20% Similarity=0.219 Sum_probs=82.5
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
++|+++||+|.... .....+.....++|+|+|+||.+... . .+.+...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~------~---------------------~~~l~~~---- 50 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPF------T---------------------LDALEGG---- 50 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCcc------c---------------------hHHhhcc----
Confidence 68999999998653 23344444567999999999999521 1 0111110
Q ss_pred hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhc
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (530)
-..++++|.||.|..... -..|. --.+.++++
T Consensus 51 -~~~~i~~V~GN~D~~~~~-----------~~~p~---------~~~~~~~g~--------------------------- 82 (172)
T COG0622 51 -LAAKLIAVRGNCDGEVDQ-----------EELPE---------ELVLEVGGV--------------------------- 82 (172)
T ss_pred -cccceEEEEccCCCcccc-----------ccCCh---------hHeEEECCE---------------------------
Confidence 257899999999985210 01111 111233322
Q ss_pred ccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCc
Q 009637 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (530)
Q Consensus 358 ~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG 437 (530)
+|.+.|--.|... . -...++.+-++.++|+++.||+|...... .+|+++|..|+..
T Consensus 83 --------ki~l~HGh~~~~~-~-------~~~~l~~la~~~~~Dvli~GHTH~p~~~~--------~~~i~~vNPGS~s 138 (172)
T COG0622 83 --------KIFLTHGHLYFVK-T-------DLSLLEYLAKELGADVLIFGHTHKPVAEK--------VGGILLVNPGSVS 138 (172)
T ss_pred --------EEEEECCCccccc-c-------CHHHHHHHHHhcCCCEEEECCCCcccEEE--------ECCEEEEcCCCcC
Confidence 4556664333211 0 12356666777899999999999865543 2678888777654
Q ss_pred c
Q 009637 438 N 438 (530)
Q Consensus 438 ~ 438 (530)
.
T Consensus 139 ~ 139 (172)
T COG0622 139 G 139 (172)
T ss_pred C
Confidence 4
|
|
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00011 Score=74.55 Aligned_cols=203 Identities=16% Similarity=0.206 Sum_probs=102.0
Q ss_pred CeEEEEEccCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 198 PKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--------------~~~~~~~l~----~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
.++|++.+|+|.... ..+.++++. +.+++ ++|..||......+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 589999999996421 022333332 23555 67889999953211
Q ss_pred ccccchHHHHHHHHHHHHhhhcCCe-EEccCCcccccccc-ccchHHHhhhcCCCCC--------CCCC---CCcceEEE
Q 009637 259 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAG-NQTFVAYSSRFAFPSE--------ESGS---LSSFYYSF 325 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l~~~vP~-~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~--------~~~~---~~~~yYsf 325 (530)
...+...+....+.|+. +++ .+++||||+..... ...+..+.....+|-- +.+. ....|.-+
T Consensus 67 -~~~~~~~g~~~~~~mN~----mgyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~ 141 (282)
T cd07407 67 -SDASPPPGSYSNPIFRM----MPYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKF 141 (282)
T ss_pred -eeeecCCChHHHHHHHh----cCCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEE
Confidence 11111122333444444 343 56899999953211 1112223232222220 0001 11235666
Q ss_pred EcC-cEE--EEEEccccc-------CCCC--HHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHH
Q 009637 326 NAG-GIH--FIMLGAYIS-------YDKS--GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEME 393 (530)
Q Consensus 326 ~~G-~v~--fI~Ldt~~~-------~~~~--~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~ 393 (530)
+.+ +++ +|.+-+... +... ..+.+|+.+.|++ .+...+|++.|...... .+ ..+...
T Consensus 142 ~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d-----~~---~~~~~~ 210 (282)
T cd07407 142 TTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDD-----AE---FKVLHD 210 (282)
T ss_pred EcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCC-----cc---HHHHHH
Confidence 776 655 455533211 0111 1223488777874 34667999999876432 11 111122
Q ss_pred HHHHHc-CCc-EEEEccccCceeeeecccCccCCCCcEEEEeCCCccccc
Q 009637 394 ALLYSY-GVD-IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 441 (530)
Q Consensus 394 ~ll~k~-~Vd-lvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e~ 441 (530)
.+.++. ++| ++|.||.|..... ++ .+|++.+-.|.-|..-+
T Consensus 211 ~la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 211 AIRKIFPDTPIQFLGGHSHVRDFT-QY------DSSSTGLESGRYLETVG 253 (282)
T ss_pred HHHHhCCCCCEEEEeCCcccccce-ec------cCcEEEEeccchhhceE
Confidence 233444 577 7999999975332 11 25666666676665443
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00011 Score=73.55 Aligned_cols=194 Identities=17% Similarity=0.185 Sum_probs=104.9
Q ss_pred eEEEEEccCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~---~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
+||+++||.=..... ...+.++.+ .++||++..||.+-. |... . ....+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~g------G~Gi----------------~---~~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTH------GKGL----------------T---LKIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCC------CCCC----------------C---HHHHHHH
Confidence 589999998543211 234455543 579999999999832 2110 0 1112223
Q ss_pred HHhhhcCCeEEccCCccccccccccchHH---HhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcc--cccCCC--CHHH
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVA---YSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDK--SGHQ 347 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~---y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~--~~~Q 347 (530)
.. ..+-++.+ |||++........... ......+|.. ..+..|..++.++.++-+++- .....+ ...-
T Consensus 56 ~~--~GvDviT~-GNH~~Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQ--SGVNYITM-GNHTWFQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hh--cCCCEEEc-cchhccCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 32 35566655 9999963210000111 1111123322 223446667888766655542 211111 1222
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCC
Q 009637 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (530)
Q Consensus 348 ~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G 427 (530)
++-+++.+++.+. +++.+||.+|--. .. .+.....+.+.+|++|+.-|.|...--.++ =|+|
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haea-----------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD~~i-----l~~g 191 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAET-----------TS-EKNAFGMAFDGYVTAVVGTHTHVPTADLRI-----LPKG 191 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCC-----------HH-HHHHHHHHhCCCccEEEeCCCCCCCCccee-----CCCC
Confidence 3334555554432 3667999999532 11 133456677789999999999974332221 3689
Q ss_pred cEEEEe-CCCccccc
Q 009637 428 PVHITI-GDGGNLEK 441 (530)
Q Consensus 428 ~vyIv~-G~gG~~e~ 441 (530)
+.||+- |.-|..++
T Consensus 192 tayitD~Gm~G~~~s 206 (266)
T TIGR00282 192 TAYITDVGMTGPFGS 206 (266)
T ss_pred CEEEecCCcccCccc
Confidence 999984 77777654
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3.2e-05 Score=74.88 Aligned_cols=193 Identities=16% Similarity=0.211 Sum_probs=99.2
Q ss_pred EEccCCCCCChH---HHH-HHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 203 IVGDLGLTYNTT---CTI-NHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 203 v~gD~g~~~~~~---~~~-~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
+++|+|.+.... ..+ +-|... +.|.+.++||++. .|. |.. .+.+--++..+.+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cCC---------------cccHHHHHHHHHHHH
Confidence 689999884432 222 323333 4599999999993 442 220 011112233333444
Q ss_pred h-hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHH
Q 009637 277 L-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 355 (530)
Q Consensus 277 l-~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L 355 (530)
+ ...+|++.++||||+.. ...+...+..- ...+.+-.+++-|-+++.+-.-. +.....++.|+....
T Consensus 63 ~a~~G~~v~~i~GN~Dfll------~~~f~~~~g~~-----~l~~~~~~~~l~g~~~Ll~HGD~-f~t~~~~y~~~r~~~ 130 (237)
T COG2908 63 LARKGTRVYYIHGNHDFLL------GKRFAQEAGGM-----TLLPDPIVLDLYGKRILLAHGDT-FCTDDRAYQWFRYKV 130 (237)
T ss_pred HHhcCCeEEEecCchHHHH------HHHHHhhcCce-----EEcCcceeeeecCcEEEEEeCCc-ccchHHHHHHHHHHc
Confidence 4 45699999999999741 12222333100 01122333444445555553311 223445555554432
Q ss_pred hcccCCCCCEEE-EEeCCCCc-----------cC--CCCCCch----hHHHHHHHHHHHHHcCCcEEEEccccCceeeee
Q 009637 356 ANVDRSVTPWLV-ATWHPPWY-----------SS--YSSHYRE----AECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417 (530)
Q Consensus 356 ~~~~r~~~pwvI-v~~H~P~y-----------~s--~~~~~~~----~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~p 417 (530)
.. +|+. ++.+.|.. .+ ....-.. .+.+.+...+.+++++||.+++||+|.-+-.
T Consensus 131 ~~------~~~~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~-- 202 (237)
T COG2908 131 HW------AWLQLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH-- 202 (237)
T ss_pred cc------HHHHHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc--
Confidence 22 1111 11122211 01 0000000 1223456778889999999999999986543
Q ss_pred cccCccCCCCcEEEEeCCCccccc
Q 009637 418 VFNYTLDPCGPVHITIGDGGNLEK 441 (530)
Q Consensus 418 v~~~~~~~~G~vyIv~G~gG~~e~ 441 (530)
+-.+..||+.|+.. .|+
T Consensus 203 ------~i~~~~yi~lGdW~-~~~ 219 (237)
T COG2908 203 ------NIPGITYINLGDWV-SEG 219 (237)
T ss_pred ------cCCCceEEecCcch-hcc
Confidence 23569999999987 443
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.6e-05 Score=85.32 Aligned_cols=202 Identities=16% Similarity=0.210 Sum_probs=102.6
Q ss_pred CCeEEEEEccCCCCCCh------HHHHHHHH---------hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccc
Q 009637 197 YPKRIAIVGDLGLTYNT------TCTINHMS---------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~~------~~~~~~l~---------~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~ 261 (530)
.+.++++++|+|.+... ...++.+. ..+++.++++||++...+... +.. .+.....
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~--------~~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQE--------EELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cch--------hhccchh
Confidence 36899999999977531 22344444 457999999999995311000 000 0000001
Q ss_pred cchHHHHHHHHHHHHhhhcCCeEEccCCcccccccc--ccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccc
Q 009637 262 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG--NQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 339 (530)
Q Consensus 262 ~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~--~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (530)
.+ .+.+.+.++++.+...+|+++++||||...... ......|...+..+. -....+ -+.+++++.++++.-...
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~--v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHN--VTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCC--eEEecC-CeEEEECCEEEEEECCCC
Confidence 11 223456667777778899999999999753211 111122322221110 001112 235777888887765321
Q ss_pred --c---C---CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 009637 340 --S---Y---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 340 --~---~---~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
+ + .....-.+.+++.|+.. .-.| ..-.+.|.|.... ++ | ++++ -.|++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~r--HlaP--t~p~~~~~~p~~~-D~---------l--vi~~-~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRR--HLAP--IYGGRTPIAPEKE-DY---------L--VIDE-VPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhc--ccCC--CCCCCEEeCcCCC-CC---------E--EEec-CCCEEEeCCCCc
Confidence 0 1 01122345566655531 1111 0001122222111 00 0 1112 368999999999
Q ss_pred ceeeeecccCccCCCCcEEEEeCCC
Q 009637 412 YERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 412 yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
+.... -.|+.+|.+|+-
T Consensus 452 ~~~~~--------~~g~~~IN~gsf 468 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGTW 468 (504)
T ss_pred cceEE--------ECCEEEEECCcc
Confidence 76542 257888887764
|
|
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.15 E-value=4.1e-05 Score=77.61 Aligned_cols=157 Identities=18% Similarity=0.266 Sum_probs=81.6
Q ss_pred HHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccccc
Q 009637 216 TINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEA 294 (530)
Q Consensus 216 ~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~ 294 (530)
.++++.+.+++ +++.+||+....... .. .+.....+.|+.+ ..- +.++||||+..
T Consensus 40 ~v~~~r~~~~~~l~ld~GD~~~gs~~~-------------------~~--~~g~~~~~~ln~~--g~D-~~~lGNHefd~ 95 (281)
T cd07409 40 LVKELRAENPNVLFLNAGDAFQGTLWY-------------------TL--YKGNADAEFMNLL--GYD-AMTLGNHEFDD 95 (281)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCcchh-------------------hh--cCChHHHHHHHhc--CCC-EEEeccccccC
Confidence 45556556677 566699998532110 00 0112223444443 344 44679999863
Q ss_pred cccccchHHHhhhcCCCCCCC-----C------CCCcceEEEEcCcEEE--EEEcccccC---C--C---CHHHHHHHHH
Q 009637 295 QAGNQTFVAYSSRFAFPSEES-----G------SLSSFYYSFNAGGIHF--IMLGAYISY---D--K---SGHQYKWLEK 353 (530)
Q Consensus 295 ~~~~~~f~~y~~~f~~P~~~~-----~------~~~~~yYsf~~G~v~f--I~Ldt~~~~---~--~---~~~Q~~WL~~ 353 (530)
+...+..+.....+|.-.. . .....|.-++.+++++ |.+-+.... . . -.+..+.+++
T Consensus 96 --G~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~ 173 (281)
T cd07409 96 --GVEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQK 173 (281)
T ss_pred --CHHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHH
Confidence 2233444444443332110 0 1123466678888554 544332110 0 0 1233455666
Q ss_pred HHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCce
Q 009637 354 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYE 413 (530)
Q Consensus 354 ~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~ye 413 (530)
.+++....+...+|++.|-.... . . .+.++ .+||++++||.|...
T Consensus 174 ~v~~lr~~~~D~II~l~H~G~~~--------d----~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 174 EADKLKAQGVNKIIALSHSGYEV--------D----K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHHHHhcCCCEEEEEeccCchh--------H----H---HHHHcCCCCcEEEeCCcCccc
Confidence 66665444567799999976421 1 1 22223 489999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00016 Score=86.90 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=95.2
Q ss_pred CCeEEEEEccCCCCC-Ch---HHHHHHHHhCCCCEEEE-cCccccccccccCCCCCcccccCCCCCCccccchHHHHHHH
Q 009637 197 YPKRIAIVGDLGLTY-NT---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~-~~---~~~~~~l~~~~pDfvl~-~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~ 271 (530)
..++|++++|+|... .. ...++++.+.+|+.+++ +||++..... .. ..++....
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-------------------~~--~~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-------------------SN--LLKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-------------------hh--hcCChHHH
Confidence 469999999999653 22 33466666678887766 9999843210 00 00112233
Q ss_pred HHHHHhhhcCCeEEccCCccccccccccchHHHhhhcC------------CCC---C----CCCC---CCcceEEEEcCc
Q 009637 272 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA------------FPS---E----ESGS---LSSFYYSFNAGG 329 (530)
Q Consensus 272 ~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~------------~P~---~----~~~~---~~~~yYsf~~G~ 329 (530)
+.|+.+ -.-+.++||||+... ...+..+..... +|- | ..+. ....|.-++.++
T Consensus 718 ~~ln~l---g~d~~~~GNHEfd~g--~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM---GYDASTFGNHEFDWG--PDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc---CCCEEEecccccccC--hHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 344432 233569999998632 222333322211 111 0 0111 112466678887
Q ss_pred EE--EEEEcccc-cC----C-----CCHHHHHHHHHHHhccc-CCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHH
Q 009637 330 IH--FIMLGAYI-SY----D-----KSGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 396 (530)
Q Consensus 330 v~--fI~Ldt~~-~~----~-----~~~~Q~~WL~~~L~~~~-r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll 396 (530)
++ ||.+-+.. .. . .-.+..+.+++..++.. ..+...+|++.|......... .+ ....+|.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHH
Confidence 55 45554321 00 0 01123334444444433 245677999999886532111 11 1123344
Q ss_pred HHc-CCcEEEEccccCce
Q 009637 397 YSY-GVDIVFNGHVHAYE 413 (530)
Q Consensus 397 ~k~-~VdlvlsGH~H~ye 413 (530)
++. +||++|.||.|...
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 443 79999999999754
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.7e-05 Score=79.09 Aligned_cols=73 Identities=26% Similarity=0.439 Sum_probs=48.9
Q ss_pred eEEEEEccCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchH
Q 009637 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~ 265 (530)
+||++++|+|.+... ...++.+.+.++|+|+++||+.... . + . ..
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~------------p--~--~~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------N------------P--P--AE 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------C------------C--C--HH
Confidence 589999999986421 1234444567999999999999521 1 0 0 11
Q ss_pred HHHHHHHHHHHhhh-c-CCeEEccCCcccc
Q 009637 266 RWDYWGRFMQNLVS-K-VPIMVVEGNHEIE 293 (530)
Q Consensus 266 ~wd~~~~~l~~l~~-~-vP~~~v~GNHD~~ 293 (530)
....+.+.++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22344556666643 3 8999999999985
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00012 Score=72.48 Aligned_cols=197 Identities=16% Similarity=0.196 Sum_probs=96.7
Q ss_pred EEEccCCCCCCh--H----HHHHHHHhC-----CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHH
Q 009637 202 AIVGDLGLTYNT--T----CTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 270 (530)
Q Consensus 202 ~v~gD~g~~~~~--~----~~~~~l~~~-----~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~ 270 (530)
++++|+|.+... . ..++.+... ++|.++++||++...... .+... .+ ..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~-~~--------~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE-EL--------EILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh-hh--------hhhhHHHHHHHH
Confidence 689999976432 1 223333333 569999999999531000 00000 00 000112235566
Q ss_pred HHHHHHhhhcCCeEEccCCccccccc--cccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccc--cc---C--
Q 009637 271 GRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY--IS---Y-- 341 (530)
Q Consensus 271 ~~~l~~l~~~vP~~~v~GNHD~~~~~--~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~--~~---~-- 341 (530)
.+.++.+...+|+++++||||..... .......+...+. +.+ -....+. +.+.+++.+|+..... .+ +
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np-~~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNP-ALVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCC-CEEEECCEEEEEECCCCHHHHHHhCC
Confidence 77788887889999999999985321 1111223333221 100 0011122 2577888887764321 00 0
Q ss_pred -CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeeccc
Q 009637 342 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFN 420 (530)
Q Consensus 342 -~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~ 420 (530)
.....-.++++..|.... -.|. .-.-.|.+... .++ +..+...+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~h--l~P~--~~~~~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~---- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRH--LAPI--YGGRTPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV---- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcc--cCCC--CCCCEeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE----
Confidence 112223455666555421 1110 00001111100 000 1112367899999999977653
Q ss_pred CccCCCCcEEEEeCCC
Q 009637 421 YTLDPCGPVHITIGDG 436 (530)
Q Consensus 421 ~~~~~~G~vyIv~G~g 436 (530)
-+|+.+|..|+-
T Consensus 208 ----~~~~~~vn~Gsf 219 (243)
T cd07386 208 ----YRGVLLVNSGTW 219 (243)
T ss_pred ----ECCEEEEECCCC
Confidence 257888877763
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.7e-05 Score=76.61 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=25.1
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHh-CCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Y 236 (530)
||+++||+|..... ..+++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 78999999965322 222333322 36899999999995
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00026 Score=71.86 Aligned_cols=188 Identities=19% Similarity=0.152 Sum_probs=88.5
Q ss_pred eEEEEEccCCCCCC-----------hHHHHHHHHhC----C-CCEEEEcCccccccccccCCCCCcccccCCCCCCcccc
Q 009637 199 KRIAIVGDLGLTYN-----------TTCTINHMSSN----E-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-----------~~~~~~~l~~~----~-pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~ 262 (530)
++|++.+|+|.... ....++++.+. + .-+++.+||+... +. ....
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~G-------s~------------~~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTG-------VP------------ESDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCC-------ch------------hHHh
Confidence 47889999986421 12345555432 3 3588999999842 21 0000
Q ss_pred chHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCC--C----CCC-CCCcceEEEEcCcEEE--E
Q 009637 263 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS--E----ESG-SLSSFYYSFNAGGIHF--I 333 (530)
Q Consensus 263 y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~--~----~~~-~~~~~yYsf~~G~v~f--I 333 (530)
+ +.....+.|+.+ ..- ..++||||+... ...+........+|- . ..+ .....|.-++.+++++ |
T Consensus 62 ~--~g~~~~~~~n~~--g~D-a~~~GNHEfD~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 Q--DAEPDFRGMNLV--GYD-AMAVGNHEFDNP--LEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred c--CcchHHHHHHhh--CCc-EEeecccccccC--HHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 0 011122344443 333 346699999632 222333333222222 1 001 1123466677887664 4
Q ss_pred EEcccc-cC--CC-------CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcE
Q 009637 334 MLGAYI-SY--DK-------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDI 403 (530)
Q Consensus 334 ~Ldt~~-~~--~~-------~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~Vdl 403 (530)
.+-+.. .. .. -.+.++=+++.+++.+..+...+|++.|-............. ....+.+.+...+||+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~~~~~--~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHGSNAP--GDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccccccCc--hHHHHHHhcCCCCCCE
Confidence 443321 00 00 011222233333322223566799999988753221100000 0112222222358999
Q ss_pred EEEccccCcee
Q 009637 404 VFNGHVHAYER 414 (530)
Q Consensus 404 vlsGH~H~yeR 414 (530)
+|.||.|....
T Consensus 213 IigGHsH~~~~ 223 (285)
T cd07405 213 IVGGHSQDPVC 223 (285)
T ss_pred EEeCCCCcccc
Confidence 99999998553
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00011 Score=76.89 Aligned_cols=113 Identities=18% Similarity=0.307 Sum_probs=70.6
Q ss_pred CeEEEEEccCCCCCCh------------------HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 198 PKRIAIVGDLGLTYNT------------------TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~------------------~~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
++|++.++|.|.-.+. ...+..+. ..+||.++++||+.+ .|...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfD------eG~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFD------EGQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccc------cCccCC----------
Confidence 7999999999875421 11122221 259999999999995 233211
Q ss_pred ccccchHHHHHHHHHHHHh---hhcCCeEEccCCccccccccc--cchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEE
Q 009637 259 IHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFI 333 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l---~~~vP~~~v~GNHD~~~~~~~--~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI 333 (530)
.++|.+..+-++.+ ...+|.+.++||||++..... ..-..|.+.| ++...+|+.|+..|+
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf~ 176 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTFV 176 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCceeE
Confidence 23454433334444 247999999999999743211 1123344444 235667999999999
Q ss_pred EEcccccC
Q 009637 334 MLGAYISY 341 (530)
Q Consensus 334 ~Ldt~~~~ 341 (530)
++|++...
T Consensus 177 ~~d~~~ls 184 (410)
T KOG3662|consen 177 MFDSNALS 184 (410)
T ss_pred Eeeehhhc
Confidence 99986543
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.89 E-value=9.3e-05 Score=69.08 Aligned_cols=41 Identities=22% Similarity=0.379 Sum_probs=27.6
Q ss_pred CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCcccc
Q 009637 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 224 ~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
++|.|+++||++.. +. .... .+.++.+ ..|++.++||||..
T Consensus 42 ~~d~vi~~GDl~~~------~~------------------~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 42 PDDTVYHLGDFSFG------GK------------------AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCEEEEeCCCCCC------CC------------------hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 68999999999942 21 0111 3334433 46899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=5.1e-05 Score=80.81 Aligned_cols=73 Identities=23% Similarity=0.403 Sum_probs=47.5
Q ss_pred eEEEEEccCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchH
Q 009637 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~ 265 (530)
+||++++|+|.+... ..+++.+.+.+||+||++||+... +.. . ..
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~--~~ 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------P--SY 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------c--HH
Confidence 589999999986321 123444556899999999999842 110 0 01
Q ss_pred HHHHHHHHHHHhh-hcCCeEEccCCcccc
Q 009637 266 RWDYWGRFMQNLV-SKVPIMVVEGNHEIE 293 (530)
Q Consensus 266 ~wd~~~~~l~~l~-~~vP~~~v~GNHD~~ 293 (530)
....+.+++..+. ..+|+++++||||..
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1123344455553 368999999999975
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=6.3e-05 Score=78.33 Aligned_cols=74 Identities=18% Similarity=0.269 Sum_probs=46.7
Q ss_pred eEEEEEccCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchH
Q 009637 199 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~ 265 (530)
+||+++||+|.+... ...++.+.+++||+|+++||+.... ... . ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~----~~~-------------~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVR----KAI-------------T----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCC----CCC-------------C----HH
Confidence 589999999986321 2234444568999999999998421 000 0 11
Q ss_pred HHHHHHH-HHHHhh-hcCCeEEccCCcccc
Q 009637 266 RWDYWGR-FMQNLV-SKVPIMVVEGNHEIE 293 (530)
Q Consensus 266 ~wd~~~~-~l~~l~-~~vP~~~v~GNHD~~ 293 (530)
......+ +++.+. ..+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1222222 234442 479999999999974
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.78 E-value=5.5e-05 Score=73.23 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=20.5
Q ss_pred HHHHHHHHcCCcEEEEccccCcee
Q 009637 391 EMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 391 ~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
.+..+|..++.++++.||+|....
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~~ 181 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEGG 181 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeecC
Confidence 577889999999999999997544
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00082 Score=74.03 Aligned_cols=185 Identities=15% Similarity=0.137 Sum_probs=100.1
Q ss_pred CCeEEEEEccCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCcccccCCCCCCc
Q 009637 197 YPKRIAIVGDLGLTYN------------T----TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~------------~----~~~~~~l~~~-~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~ 259 (530)
..++|++.+|+|.... . ...++++.+. +..++|.+||+...+...+.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~---------------- 88 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY---------------- 88 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc----------------
Confidence 4799999999997532 1 1234444444 45689999999954211100
Q ss_pred cccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCC---C---C---CCCCCcceEEEEcCcE
Q 009637 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPS---E---E---SGSLSSFYYSFNAGGI 330 (530)
Q Consensus 260 ~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~---~---~---~~~~~~~yYsf~~G~v 330 (530)
........+.|+.+ -.=..+.||||+... ...+..+.....+|- | . .....+-|.-++.+++
T Consensus 89 ----~~~g~~~~~~mN~m---~yDa~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 89 ----LTKGEPTVDLLNAL---GYDAMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ----ccCCChHHHHHhhc---CCcEEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 01111223344433 122568899999632 233444555444441 0 1 1122356888899885
Q ss_pred E--EEEEccc-cc-C---C-----CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH
Q 009637 331 H--FIMLGAY-IS-Y---D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS 398 (530)
Q Consensus 331 ~--fI~Ldt~-~~-~---~-----~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k 398 (530)
+ +|.+.+. .. + . .-....+++++.+.+.+.+...-+|++.|-+............. ......
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~~~----- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDVAV----- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccccc-----
Confidence 5 4555531 11 1 1 12345677777777665443667999999987643221111000 000000
Q ss_pred cCCcEEEEccccCc
Q 009637 399 YGVDIVFNGHVHAY 412 (530)
Q Consensus 399 ~~VdlvlsGH~H~y 412 (530)
.++|+++.||.|.+
T Consensus 234 ~~iD~i~~GH~H~~ 247 (517)
T COG0737 234 PGIDLIIGGHSHTV 247 (517)
T ss_pred cCcceEeccCCccc
Confidence 44999999999964
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=4.2e-05 Score=74.61 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=27.2
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHhC-CCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~~-~pDfvl~~GDl~Y 236 (530)
|++++||+|..... .++++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999986432 3345554333 6789999999995
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0013 Score=73.05 Aligned_cols=114 Identities=15% Similarity=0.173 Sum_probs=58.3
Q ss_pred eEEccCCccccccccccchHHHhhhcCCCCCC------CC----CCCcceEEEEcCc--EEEEEEccccc-C---CCC--
Q 009637 283 IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE------SG----SLSSFYYSFNAGG--IHFIMLGAYIS-Y---DKS-- 344 (530)
Q Consensus 283 ~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~----~~~~~yYsf~~G~--v~fI~Ldt~~~-~---~~~-- 344 (530)
=..++||||+.. +...+..+.....+|--. .. ..-..|.-++.++ |-||.|.+... . .+.
T Consensus 84 Da~~lGNHEFd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~ 161 (550)
T TIGR01530 84 DFFTLGNHEFDA--GNEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKD 161 (550)
T ss_pred CEEEeccccccC--CHHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCc
Confidence 367899999863 233344444443333210 00 1123466678887 55677754211 0 110
Q ss_pred ---HHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCce
Q 009637 345 ---GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 413 (530)
Q Consensus 345 ---~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~ye 413 (530)
...++=+++..++..+.+..-+|++.|.-.. .. ..+.++. +||++|+||.|.+-
T Consensus 162 ~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~--------~d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 162 IKFIDEIAAAQIAANALKQQGINKIILLSHAGFE--------KN-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred eEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcH--------HH-------HHHHhcCCCCCEEEeCCCCccc
Confidence 1112223333322222346679999997531 11 1233332 79999999999864
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0012 Score=73.44 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=89.8
Q ss_pred CCeEEEEEccCCCCCC--------h---HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCcccccCCCCCCcc
Q 009637 197 YPKRIAIVGDLGLTYN--------T---TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~--------~---~~~~~~l~~-----~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
..++|++++|+|.... . ...++++.+ ...-++|.+||+...... .
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-------------------s 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-------------------h
Confidence 4699999999997532 1 223444442 223578999999842110 0
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCC-------CCC-CCCcceEEEEcCcEEE
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE-------ESG-SLSSFYYSFNAGGIHF 332 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~-------~~~-~~~~~yYsf~~G~v~f 332 (530)
..+. .....+.|+.+ ..- ..++||||+... ...+..+.....+|-- ..+ ..-..|.-++.+++++
T Consensus 94 ~~~~--g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQD--AEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhcC--CchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 0010 11123344433 233 456799998632 2233333333233321 001 1123466678888654
Q ss_pred --EEEccccc--C-CC-------CHHHHHHHHHHHhcccC-CCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc
Q 009637 333 --IMLGAYIS--Y-DK-------SGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY 399 (530)
Q Consensus 333 --I~Ldt~~~--~-~~-------~~~Q~~WL~~~L~~~~r-~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~ 399 (530)
|.+-+... . .+ -.+..+-+++.+++... .+...+|++.|.......... .... .-..|.++.
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~~ 241 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARSL 241 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCc----cHHHHHHhC
Confidence 44433211 0 00 01122223333333321 356779999998875321110 0000 002233333
Q ss_pred ---CCcEEEEccccCce
Q 009637 400 ---GVDIVFNGHVHAYE 413 (530)
Q Consensus 400 ---~VdlvlsGH~H~ye 413 (530)
+||++|.||.|..-
T Consensus 242 ~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 242 PAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CccCceEEEeCCCCccc
Confidence 79999999999753
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0003 Score=64.39 Aligned_cols=50 Identities=14% Similarity=-0.088 Sum_probs=31.7
Q ss_pred EEEEeCCCCccCCCCC--C---chhHHHHHHHHHHHHHcCCcEEEEcccc-Cceee
Q 009637 366 LVATWHPPWYSSYSSH--Y---REAECMRVEMEALLYSYGVDIVFNGHVH-AYERS 415 (530)
Q Consensus 366 vIv~~H~P~y~s~~~~--~---~~~~~~r~~l~~ll~k~~VdlvlsGH~H-~yeR~ 415 (530)
-|++.|.|++...... . .....-...+.+++++.+....||||.| -|||-
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 4777888776642110 0 0001123466778888999999999999 56663
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0013 Score=66.68 Aligned_cols=182 Identities=21% Similarity=0.279 Sum_probs=102.9
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhC---CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH-
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSN---EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF- 273 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~---~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~- 273 (530)
+||+|-|++|...+ .-.++..+.+. +.|++|++||+--- .|+....|. .+...|+..-+ |.+.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQav----Rn~~D~~si-------avPpKy~~m~~-F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAV----RNEQDLKSI-------AVPPKYRRMGD-FYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhh----cchhhcccc-------cCCHHHHHHHH-HHHHh
Confidence 58999999997532 34556666654 89999999999522 233322221 12233432222 2222
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEE-----EEcCcEEEEEEcc---cccCCC--
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYS-----FNAGGIHFIMLGA---YISYDK-- 343 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYs-----f~~G~v~fI~Ldt---~~~~~~-- 343 (530)
-.++.+.+|.+++-||||.. +|.. .+|..+- -..+.||- .++||||+-.|+. +.+|..
T Consensus 69 sge~~APVlTIFIGGNHEAs---------nyL~--eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS---------NYLQ--ELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHH---------HHHH--hcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 23456788999999999984 3433 2343221 12356663 6789999999886 223321
Q ss_pred ---------------CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchh-HHH----------------HHH
Q 009637 344 ---------------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREA-ECM----------------RVE 391 (530)
Q Consensus 344 ---------------~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~-~~~----------------r~~ 391 (530)
.-.+++ ...|++. +.|-=|.++|-=+-... +++.. ..+ ...
T Consensus 137 ~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~ 209 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPA 209 (456)
T ss_pred CCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChH
Confidence 011111 1223332 23445777785322211 11111 111 247
Q ss_pred HHHHHHHcCCcEEEEccccC
Q 009637 392 MEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 392 l~~ll~k~~VdlvlsGH~H~ 411 (530)
+++||++.+...+|+.|.|.
T Consensus 210 ~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 210 LEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHhCcchhhhhhHhh
Confidence 88999999999999999996
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0043 Score=63.87 Aligned_cols=38 Identities=16% Similarity=0.105 Sum_probs=25.0
Q ss_pred eEEEEEccCCCCCC----h---HHHHHHHHhC----C-CCEEEEcCcccc
Q 009637 199 KRIAIVGDLGLTYN----T---TCTINHMSSN----E-PDLVLLVGDVTY 236 (530)
Q Consensus 199 ~rf~v~gD~g~~~~----~---~~~~~~l~~~----~-pDfvl~~GDl~Y 236 (530)
++|++.+|+|.... . ...++++.+. . ..++|.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47899999997632 1 2235555432 3 358899999984
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00047 Score=64.58 Aligned_cols=52 Identities=19% Similarity=0.469 Sum_probs=33.1
Q ss_pred HHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCcccc
Q 009637 220 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 220 l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
+.+.+||.++++||+++... +. . ...+.... .+......+|++.++||||..
T Consensus 37 ~~~~~~d~lii~GDl~~~~~----~~----------------~-~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 37 IEEYGPERLIILGDLKHSFG----GL----------------S-RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHhcCCCEEEEeCccccccc----cc----------------C-HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 34579999999999995311 10 0 11222222 333445688999999999974
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0069 Score=54.86 Aligned_cols=38 Identities=24% Similarity=0.228 Sum_probs=25.0
Q ss_pred EEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 009637 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 366 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.|+++|.|.-+.. +.+ ........+.++++.+.||.|+
T Consensus 110 ~~~LsHyP~~~~~--~~~------~~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 110 DVYLSHYPRPGQD--HPG------MESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred EEEEEeCCCCCCC--Ccc------hhhhHHHHhccCCeEEeccccc
Confidence 6999999965432 111 1122234456899999999999
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.014 Score=67.09 Aligned_cols=60 Identities=17% Similarity=0.051 Sum_probs=33.3
Q ss_pred HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCce
Q 009637 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 349 ~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~ye 413 (530)
+.+++...+.+......||++.|.-+.........++. -..|..--+||++|.||.|..-
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~-----~~~LA~v~GIDaIvgGHsH~~~ 355 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV-----GYQIASLSGVDAVVTGHSHAEF 355 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccch-----hhHHhcCCCCCEEEECCCCCcc
Confidence 34444444433345777999999876432111111111 1122222489999999999853
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0012 Score=65.03 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=42.6
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
+|++++||+|..... .+.++.+... ..|.++++||+++. |.. .. ..+...++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDr------G~~------------------s~-~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDR------GKR------------------SK-DVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCC------CCC------------------hH-HHHHHHHH
Confidence 478999999965322 3344555332 35999999999952 320 00 11222233
Q ss_pred HhhhcCCeEEccCCcccc
Q 009637 276 NLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~ 293 (530)
.+....++++++||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223346899999999974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.011 Score=71.42 Aligned_cols=49 Identities=27% Similarity=0.228 Sum_probs=31.0
Q ss_pred CCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCcee
Q 009637 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYER 414 (530)
Q Consensus 361 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR 414 (530)
.+...+|++.|...-........+ ....+|.++. +||++|.||.|....
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~~~e-----n~~~~la~~~~gID~Il~GHsH~~~~ 282 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSSGAE-----DSVYDLAEKTKGIDAIVAGHQHGLFP 282 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCCCcc-----hHHHHHHHhCCCCcEEEeCCCccccc
Confidence 456779999998865432111111 2233445443 799999999998643
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0015 Score=65.91 Aligned_cols=67 Identities=24% Similarity=0.373 Sum_probs=42.8
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
++++++||+|..... ..+++++. +.+.|.++++||++.. |.. + ....+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdr------Gp~------------------s--~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNR------GPD------------------S--LEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCC------CcC------------------H--HHHHHHHHh
Confidence 468999999976433 23344443 2468999999999952 320 1 123333433
Q ss_pred hhhcCCeEEccCCcccc
Q 009637 277 LVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~ 293 (530)
+ ..++.++.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 3 34689999999974
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0031 Score=61.78 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=46.3
Q ss_pred eEEEEEccCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCcc
Q 009637 199 KRIAIVGDLGLTYNT--------------TCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~--------------~~~~~~l~----~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
-+.++++|+|.+... .++++++. +.+||.++++||+..... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 468899999987421 23455443 468999999999995311 0
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCcccc
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
...|..+.++++.+ ..+++.++||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02244445555554 35999999999963
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.04 Score=63.23 Aligned_cols=48 Identities=27% Similarity=0.162 Sum_probs=28.4
Q ss_pred CCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCcee
Q 009637 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYER 414 (530)
Q Consensus 361 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR 414 (530)
.....||++.|...-.... .. .+..+-. .+.+. +||++|.||.|..-.
T Consensus 243 ~GaDvIIaLsH~G~~~d~~---~~--~~ena~~-~l~~v~gID~IlgGHsH~~~~ 291 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGY---NV--GMENASY-YLTEVPGVDAVLMGHSHTEVK 291 (780)
T ss_pred cCCCEEEEEeccCcccccc---cc--cchhhhH-HHhcCCCCCEEEECCCCCccc
Confidence 4567799999987643211 10 0101111 13444 899999999998653
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.038 Score=55.16 Aligned_cols=191 Identities=15% Similarity=0.226 Sum_probs=95.6
Q ss_pred EEEEccCCCCCCh------HHHHHHHHh-----------CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 201 IAIVGDLGLTYNT------TCTINHMSS-----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 201 f~v~gD~g~~~~~------~~~~~~l~~-----------~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
+++++|+|.+.+. +..++.|.- .+..-+|++||.+.......+......+ +........
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~---~~~~~~~~~- 77 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARY---LTKKSSAAS- 77 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhc---cccccchhh-
Confidence 7889999877553 112333321 1345799999999642110000000000 000000111
Q ss_pred hHHHHHHHHHHHHhhhcCCeEEccCCccccccccc-cch-HHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccc--
Q 009637 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI-- 339 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~-~~f-~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~-- 339 (530)
..+.+.+..++..+.+.+|+.+.|||||-....-. ..+ ..+..+-....+ -...+| =|.|+++|++|++.....
T Consensus 78 ~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtN-P~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 78 VEAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTN-PYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred HHHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCC-CeEEEECCEEEEEECCCCHH
Confidence 23456677888888899999999999998643211 111 111100000000 001122 246999999999988642
Q ss_pred ---cCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC--chhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 340 ---SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 340 ---~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
.+...+.-++.|++.|+-- .-+ |.+...-..+ .+. .++.-+.-.+++|+||.|.|+.
T Consensus 156 Di~ky~~~~~~l~~me~~L~wr--Hla---------PTaPDTL~~yP~~~~-------Dpfvi~~~PhVyf~Gnq~~f~t 217 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWR--HIA---------PTAPDTLWCYPFTDR-------DPFILEECPHVYFAGNQPKFGT 217 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhc--ccC---------CCCCCccccccCCCC-------CceeecCCCCEEEeCCCcceee
Confidence 1233444567777777641 111 1111100000 000 0122233589999999999976
Q ss_pred e
Q 009637 415 S 415 (530)
Q Consensus 415 ~ 415 (530)
.
T Consensus 218 ~ 218 (257)
T cd07387 218 K 218 (257)
T ss_pred e
Confidence 4
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.042 Score=58.56 Aligned_cols=89 Identities=16% Similarity=0.316 Sum_probs=56.3
Q ss_pred CCeEEEEEccCCCCCCh------HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchH
Q 009637 197 YPKRIAIVGDLGLTYNT------TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 265 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~~------~~~~~~l~~-----~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~ 265 (530)
..+++++++|.|.+... ...++.+.- .+...++.+||++..=+. |...-.+-.+...| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigi---------Ypgq~~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGI---------YPGQEEELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEeccccccccc---------ccCcccccccccch-H
Confidence 46899999999986432 223333331 245789999999942111 11111111222223 3
Q ss_pred HHHHHHHHHHHhhhcCCeEEccCCcccccc
Q 009637 266 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ 295 (530)
Q Consensus 266 ~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~ 295 (530)
+++.+.+++..+-..+-+++.|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 567778888888888999999999998644
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.051 Score=61.27 Aligned_cols=46 Identities=26% Similarity=0.189 Sum_probs=27.6
Q ss_pred CCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCc
Q 009637 361 SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 412 (530)
Q Consensus 361 ~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~y 412 (530)
+....+|++.|............+ . .. ..+.+. +||+++.||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~e--n---~~-~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGAE--N---SA-YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCccccccc--h---HH-HHHhcCCCCCEEEcCCCCcc
Confidence 456779999998764321110111 1 11 123443 8999999999985
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.061 Score=60.88 Aligned_cols=57 Identities=21% Similarity=0.167 Sum_probs=31.4
Q ss_pred HHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCc
Q 009637 350 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAY 412 (530)
Q Consensus 350 WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~y 412 (530)
-+++.+.+.+.+....+|++.|............++ .... +.+ -+||+++.||.|..
T Consensus 206 ~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~aen-----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 206 TARKYVPEMKEKGADIVVAIPHSGISADPYKAMAEN-----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCcCCCCccccccc-----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 344443333324567799999987643211001111 1111 334 37999999999985
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.004 Score=61.31 Aligned_cols=68 Identities=22% Similarity=0.341 Sum_probs=42.3
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHh--C--------CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHH
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSS--N--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~--~--------~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd 268 (530)
||+++||+|..... .++++++.- . +.|.++++||++.. |. .-.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~--------------------~s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GP--------------------DSP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CC--------------------CHH
Confidence 79999999986432 234444411 1 36899999999952 32 012
Q ss_pred HHHHHHHHhhhcCCeEEccCCcccc
Q 009637 269 YWGRFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 269 ~~~~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
+..+.+..+...-.+..+.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443344688999999973
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0083 Score=59.56 Aligned_cols=68 Identities=24% Similarity=0.290 Sum_probs=40.3
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHh---------CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHH
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSS---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 268 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~---------~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd 268 (530)
+|++++||+|..... .++++++.- ..-|.++++||+++. |.. + .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDR------Gp~------------------S--~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDR------GPH------------------S--L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCC------CcC------------------h--H
Confidence 378999999976432 223333221 123789999999952 321 0 1
Q ss_pred HHHHHHHHhhhcCCeEEccCCccc
Q 009637 269 YWGRFMQNLVSKVPIMVVEGNHEI 292 (530)
Q Consensus 269 ~~~~~l~~l~~~vP~~~v~GNHD~ 292 (530)
...+.+..+...-.++++.||||.
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHH
Confidence 122333333334578999999996
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.085 Score=52.04 Aligned_cols=190 Identities=16% Similarity=0.235 Sum_probs=90.1
Q ss_pred EEEccCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 202 AIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 202 ~v~gD~g~~~~~---~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+++||.=..... ...+.++.+ .++|||+..|..+- .|.... + ..+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa------~G~Git---------------~---~~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAA------GGFGIT---------------P---KIAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTT------TTSS-----------------H---HHHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccC------CCCCCC---------------H---HHHHHHH---
Confidence 367776432222 223444443 58999999999983 343210 1 1122222
Q ss_pred hhcCCeEEccCCccccccccccchHHHhhh---cCCCCCCC-CCCCcceEEEEcCcEEEEEEcc--cccCCCCHHHHHHH
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSR---FAFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKWL 351 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~---f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~WL 351 (530)
...+- ..+.|||=+.. +....|... .--|.|-+ +..+..|..++.++.++.++|- .........=+.-+
T Consensus 54 ~~GvD-viT~GNH~wdk----kei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVD-VITMGNHIWDK----KEIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-S-EEE--TTTTSS----TTHHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCC-EEecCcccccC----cHHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 22444 45689998853 223333332 22333322 3456789999999877776663 32222222334445
Q ss_pred HHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEE
Q 009637 352 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431 (530)
Q Consensus 352 ~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyI 431 (530)
++.|++. +.+++.+||=+|.=. .....+| -.+.+-+|.+|+.-|+|.-.- +.++=|+|+.||
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEa-----------TSEK~A~-g~~lDGrvsaV~GTHTHVqTa-----DerILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEA-----------TSEKQAM-GWYLDGRVSAVVGTHTHVQTA-----DERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S------------HHHHHHH-HHHHBTTBSEEEEESSSS-BS-------EE-TTS-EEE
T ss_pred HHHHHhc-cccCCEEEEEeecCc-----------HHHHHHH-HHHhCCcEEEEEeCCCCccCc-----hhhccCCCCEEE
Confidence 5555554 246778999999421 1112222 345566899999999996322 222236899999
Q ss_pred Ee-CCCccccc
Q 009637 432 TI-GDGGNLEK 441 (530)
Q Consensus 432 v~-G~gG~~e~ 441 (530)
+- |.-|...+
T Consensus 191 TDvGMtG~~ds 201 (253)
T PF13277_consen 191 TDVGMTGPYDS 201 (253)
T ss_dssp S---EBEESSS
T ss_pred ecCccccCccc
Confidence 74 66666544
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.006 Score=59.45 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=26.5
Q ss_pred EEEEEccCCCCCCh-HHHHHHHH-hCCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~-~~~pDfvl~~GDl~Y 236 (530)
|++++||+|..... .++++.+. ..+.|.++++||+++
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 89999999975332 22333333 246899999999995
|
|
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.013 Score=57.30 Aligned_cols=67 Identities=18% Similarity=0.292 Sum_probs=39.9
Q ss_pred EEEEccCCCCCCh-HHHHHHHHhC--------CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHH
Q 009637 201 IAIVGDLGLTYNT-TCTINHMSSN--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 271 (530)
Q Consensus 201 f~v~gD~g~~~~~-~~~~~~l~~~--------~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~ 271 (530)
+.++||+|..... .+.++++... ..|.++++||++.. |.. + ....
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR------Gp~------------------S--~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR------GPE------------------I--RELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC------CCC------------------H--HHHH
Confidence 3589999986432 2334444211 35899999999952 320 0 1223
Q ss_pred HHHHHhhhcCCeEEccCCcccc
Q 009637 272 RFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 272 ~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
+.+..+...-.++.+.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 3343333334688999999963
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.012 Score=58.15 Aligned_cols=141 Identities=20% Similarity=0.328 Sum_probs=86.0
Q ss_pred HHhhhcCCeEEccCCccccccccc-------cchHHHhhhcCCCC------CCC--CCCCcceEEEEcCcEEEEEEcccc
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQAGN-------QTFVAYSSRFAFPS------EES--GSLSSFYYSFNAGGIHFIMLGAYI 339 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~~~~-------~~f~~y~~~f~~P~------~~~--~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (530)
.++...+|+|+-.||||...+.-. +...+|...+.-+. -.. -..-..-||++.|++|.+-+-+..
T Consensus 165 G~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~ 244 (392)
T COG5555 165 GNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFI 244 (392)
T ss_pred CCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeec
Confidence 344567999999999999744221 12233333222111 111 123345689999999998876543
Q ss_pred cCC-C-CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch----------------hHHHHHHHHHHHHHcCC
Q 009637 340 SYD-K-SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE----------------AECMRVEMEALLYSYGV 401 (530)
Q Consensus 340 ~~~-~-~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~----------------~~~~r~~l~~ll~k~~V 401 (530)
.-. + ...-+-||+.+|........| ++++.|.-+-.-....++. ....|.++...++-|+|
T Consensus 245 Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNv 323 (392)
T COG5555 245 GDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNV 323 (392)
T ss_pred cccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCcee
Confidence 211 1 223467999999876545555 8888887653211111110 11246788889999999
Q ss_pred cEEEEccccCceeee
Q 009637 402 DIVFNGHVHAYERSN 416 (530)
Q Consensus 402 dlvlsGH~H~yeR~~ 416 (530)
.-.+.||.|.+.-.+
T Consensus 324 vg~fhGhkhd~~may 338 (392)
T COG5555 324 VGTFHGHKHDFNMAY 338 (392)
T ss_pred EEeccccccccceee
Confidence 999999999875444
|
|
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.15 Score=50.30 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=68.8
Q ss_pred HHHHHHhhhcCCeEEccCCccccccccccchHHHh---hhcCCCCCCCCCC---CcceEEEEcCc--EEEEEEcccccCC
Q 009637 271 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYS---SRFAFPSEESGSL---SSFYYSFNAGG--IHFIMLGAYISYD 342 (530)
Q Consensus 271 ~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~---~~f~~P~~~~~~~---~~~yYsf~~G~--v~fI~Ldt~~~~~ 342 (530)
.+.|+.+ .+-++.+.+||++... ...+.... ..-.++..+.+.. ...+..++.++ +.|+.+.+.....
T Consensus 70 ~~~L~~~--G~d~~tlaNNH~fD~G--~~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~ 145 (239)
T cd07381 70 ADALKAA--GFDVVSLANNHTLDYG--EEGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGI 145 (239)
T ss_pred HHHHHHh--CCCEEEcccccccccc--hHHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCC
Confidence 3444443 5566666669998632 22222222 2223443222211 13455567777 5555554421110
Q ss_pred ----------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCc
Q 009637 343 ----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412 (530)
Q Consensus 343 ----------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~y 412 (530)
....-.+-+++.+++.+++ ...+||+.|-..-... ........+...+.+.++|+|+.||.|..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~ 219 (239)
T cd07381 146 PLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVL 219 (239)
T ss_pred cCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcC
Confidence 0111134455566555433 7789999996432111 11112234555555679999999999987
Q ss_pred eee
Q 009637 413 ERS 415 (530)
Q Consensus 413 eR~ 415 (530)
+-.
T Consensus 220 q~~ 222 (239)
T cd07381 220 QGI 222 (239)
T ss_pred CCe
Confidence 543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.013 Score=58.65 Aligned_cols=64 Identities=25% Similarity=0.352 Sum_probs=40.6
Q ss_pred EEEccCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhh
Q 009637 202 AIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 279 (530)
Q Consensus 202 ~v~gD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~ 279 (530)
.++||+|..... .++++++.. .+.|.++++||++.. |.. + .+..+.+..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdR------Gp~------------------s--~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNR------GPD------------------S--LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCC------CcC------------------H--HHHHHHHHhcC-
Confidence 589999976432 334454432 357999999999942 320 1 12334444432
Q ss_pred cCCeEEccCCcccc
Q 009637 280 KVPIMVVEGNHEIE 293 (530)
Q Consensus 280 ~vP~~~v~GNHD~~ 293 (530)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 4688999999974
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.013 Score=56.96 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=39.5
Q ss_pred EEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhh-c
Q 009637 203 IVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-K 280 (530)
Q Consensus 203 v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~-~ 280 (530)
++||+|..... ..+++.+.....|.++++||++.. |.. .....+.+..+.. .
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~~ 55 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKILP 55 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCCC
Confidence 78999965322 233444444578999999999952 320 0122233333211 4
Q ss_pred CCeEEccCCcccc
Q 009637 281 VPIMVVEGNHEIE 293 (530)
Q Consensus 281 vP~~~v~GNHD~~ 293 (530)
.+++.+.||||..
T Consensus 56 ~~~~~l~GNHe~~ 68 (225)
T cd00144 56 DNVILLRGNHEDM 68 (225)
T ss_pred CcEEEEccCchhh
Confidence 5799999999975
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.043 Score=43.81 Aligned_cols=76 Identities=21% Similarity=0.325 Sum_probs=46.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
+|+.+++.-.. .+++.|+|...... +. ....=.|+|....+..... .... ++-.
T Consensus 2 ~P~~l~v~~~~-~~sv~v~W~~~~~~-~~-------~~~~y~v~~~~~~~~~~~~----~~~~-------------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNIS-PTSVTVSWKPPSSG-NG-------PITGYRVEYRSVNSTSDWQ----EVTV-------------PGNE 55 (85)
T ss_dssp SSEEEEEEEEC-SSEEEEEEEESSST-SS-------SESEEEEEEEETTSSSEEE----EEEE-------------ETTS
T ss_pred cCcCeEEEECC-CCEEEEEEECCCCC-CC-------CeeEEEEEEEecccceeee----eeee-------------eeee
Confidence 48888887763 89999999986411 11 1123456665554433100 0001 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
+.+.|++|+|+|.|.+||...+
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 3788899999999999997544
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.021 Score=57.78 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=25.6
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHhC------CCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSSN------EPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~~------~pDfvl~~GDl~Y 236 (530)
++.++||+|..... ..+++.+.+. ..+.++++||+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 78999999986432 3344444321 3568999999995
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.36 Score=47.22 Aligned_cols=190 Identities=18% Similarity=0.271 Sum_probs=102.3
Q ss_pred eEEEEEccCCCCCChHHHHHH---HH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNTTCTINH---MS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~~~~~~~---l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
+|++++||+=.......+.++ +. +.++|||+..|-.+- .|... -|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcCC------------------CHHHHHHHH
Confidence 589999998655433333333 33 348999999998873 34321 133333333
Q ss_pred HHhhhcCCeEEccCCccccccccccchHHHhh---hcCCCCCCC-CCCCcceEEEEcCcEEEEEEc--ccccCCC-CHHH
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEES-GSLSSFYYSFNAGGIHFIMLG--AYISYDK-SGHQ 347 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~-~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~-~~~Q 347 (530)
+ ..+- +++.|||=+... .-..|.. ++--|.+-+ +..+..|+-|+..+..+.+.| ....... -..-
T Consensus 57 ~---~G~d-viT~GNH~wd~~----ei~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~P 128 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQK----EILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNP 128 (266)
T ss_pred H---hCCC-EEecccccccch----HHHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCH
Confidence 2 2333 567899987532 1112222 222333322 133455666777665554444 3222211 2223
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCC
Q 009637 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (530)
Q Consensus 348 ~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G 427 (530)
.+=+++.|.+.+ .+++.+||-+|.-.-+ | ..+| -++.+-+|-+|+.=|+|.-.--. +.-+.|
T Consensus 129 F~~~d~l~~~~~-~~~~~iiVDFHAEtTS-------E----K~a~-g~yldGrvsavvGTHTHV~TaD~-----rIL~~G 190 (266)
T COG1692 129 FKAADKLLDEIK-LGTDLIIVDFHAETTS-------E----KNAF-GWYLDGRVSAVVGTHTHVPTADE-----RILPKG 190 (266)
T ss_pred HHHHHHHHHhCc-cCCceEEEEccccchh-------h----hhhh-heEEcCeEEEEEeccCccccccc-----eecCCC
Confidence 444566666654 3557799999963221 1 1111 12334478999999999743322 224689
Q ss_pred cEEEEe-CCCcc
Q 009637 428 PVHITI-GDGGN 438 (530)
Q Consensus 428 ~vyIv~-G~gG~ 438 (530)
+.||+- |.-|.
T Consensus 191 TayiTDvGMtG~ 202 (266)
T COG1692 191 TAYITDVGMTGP 202 (266)
T ss_pred cEEEecCccccc
Confidence 999864 55554
|
|
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.42 Score=47.13 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=67.4
Q ss_pred HHHHHHHhhhcCCeEEccCCccccccccccchHHHhh---hcCCCCCCCCCC---CcceEEEEcCcEE--EEEEccccc-
Q 009637 270 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIH--FIMLGAYIS- 340 (530)
Q Consensus 270 ~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~---~f~~P~~~~~~~---~~~yYsf~~G~v~--fI~Ldt~~~- 340 (530)
..+.|+.+ .+-++.+.+|||+... ...+....+ ...++..+.+.. ...+..++.++++ ||.+-+...
T Consensus 65 ~~~~l~~~--G~d~~~laNNH~fD~G--~~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~ 140 (239)
T smart00854 65 NAAALKAA--GFDVVSLANNHSLDYG--EEGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNN 140 (239)
T ss_pred HHHHHHHh--CCCEEEeccCcccccc--hHHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCC
Confidence 34444443 4555555569999632 222222222 223443322111 1345667788755 454433211
Q ss_pred -CC-----C-----CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccc
Q 009637 341 -YD-----K-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 409 (530)
Q Consensus 341 -~~-----~-----~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~ 409 (530)
+. . .....+-+++++++++. +...+||+.|--.-.... . . .....+..-+.+.++|+|+.||.
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~---p-~-~~~~~~A~~l~~~G~DvIiG~H~ 214 (239)
T smart00854 141 GWAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE---P-T-DEQRELAHALIDAGADVVIGHHP 214 (239)
T ss_pred CcccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC---C-C-HHHHHHHHHHHHcCCCEEEcCCC
Confidence 10 0 00112334455555432 467899999975422111 1 1 11233444444579999999999
Q ss_pred cCceee
Q 009637 410 HAYERS 415 (530)
Q Consensus 410 H~yeR~ 415 (530)
|..+..
T Consensus 215 H~~~~~ 220 (239)
T smart00854 215 HVLQPI 220 (239)
T ss_pred CcCCce
Confidence 987654
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.025 Score=56.95 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=26.6
Q ss_pred EEEEEccCCCCCCh-HHHHHHHH-hCCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~-~~~pDfvl~~GDl~Y 236 (530)
++.++||+|..... .+.++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 56799999986433 44555554 235789999999995
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.056 Score=52.84 Aligned_cols=73 Identities=21% Similarity=0.444 Sum_probs=48.1
Q ss_pred eEEEEEccCCCCCCh--------------HH---HHHH-HHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCcc
Q 009637 199 KRIAIVGDLGLTYNT--------------TC---TINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~--------------~~---~~~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
-+.++++|+|.+... .. .+++ +.+.+|+-++.+||+-.+- +.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~--------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK--------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc---------------
Confidence 478999999987532 12 2332 3357999999999998521 11
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCcccc
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~ 293 (530)
.....|+....+++.+... -++.+.||||..
T Consensus 80 -~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 80 -SLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred -cccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 0123466666666665443 599999999975
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=93.46 E-value=1.4 Score=43.60 Aligned_cols=128 Identities=13% Similarity=0.175 Sum_probs=71.2
Q ss_pred cCCeEEccCCccccccccccchH---HHhhhcCCCCCCCCC---CCcceEEEEcCcEEEEEEcc--cc-cCC--------
Q 009637 280 KVPIMVVEGNHEIEAQAGNQTFV---AYSSRFAFPSEESGS---LSSFYYSFNAGGIHFIMLGA--YI-SYD-------- 342 (530)
Q Consensus 280 ~vP~~~v~GNHD~~~~~~~~~f~---~y~~~f~~P~~~~~~---~~~~yYsf~~G~v~fI~Ldt--~~-~~~-------- 342 (530)
.+-++.+.-||.+... .+.+. ...+...++..+.+. .......++.+++++-++.. .. ...
T Consensus 75 G~d~vslANNH~~D~G--~~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~ 152 (250)
T PF09587_consen 75 GFDVVSLANNHIFDYG--EEGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPY 152 (250)
T ss_pred CCCEEEecCCCCcccc--HHHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCccccccccc
Confidence 5677778889987532 12222 222233333332211 12234556777766555542 11 000
Q ss_pred ------------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEcccc
Q 009637 343 ------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410 (530)
Q Consensus 343 ------------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 410 (530)
....+.+.+++++++++ ++..++||+.|--.-... ........+...+-+.|+|+|+.+|.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~HpH 226 (250)
T PF09587_consen 153 GFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHPH 226 (250)
T ss_pred cccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 01234588888888876 567889999996321111 111223445555566899999999999
Q ss_pred Cceee
Q 009637 411 AYERS 415 (530)
Q Consensus 411 ~yeR~ 415 (530)
..+-.
T Consensus 227 v~q~~ 231 (250)
T PF09587_consen 227 VIQPV 231 (250)
T ss_pred cccce
Confidence 87654
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.27 E-value=0.77 Score=50.27 Aligned_cols=58 Identities=19% Similarity=0.240 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcE-EEEccccCce
Q 009637 345 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDI-VFNGHVHAYE 413 (530)
Q Consensus 345 ~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~Vdl-vlsGH~H~ye 413 (530)
-.|.+|-.+.++. ....-+|+++|.|.-.. .+ ....+.++...+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~-----~e---~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDD-----DE---WKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccc-----hh---hhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 3566787777776 44556899999986321 11 112444444455 6888 9999999643
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.17 Score=51.90 Aligned_cols=23 Identities=9% Similarity=0.034 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.++.++.|++++.++++=||.=.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHEAQ 244 (305)
T ss_pred HHHHHHHHHHcCCeEEEEecccc
Confidence 46788999999999999999854
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.29 Score=49.38 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=25.0
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
+++++||+|..... .+.++.+.....+-++++||+++
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 68999999975322 22333333345678999999994
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.97 E-value=0.34 Score=49.97 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.++..+.|++++.++++=||.-.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46788999999999999999854
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.46 E-value=0.32 Score=49.45 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.3
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.+++++.++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 46888999999999999999854
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.36 Score=49.25 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.|++.+.++++=||.-.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCccc
Confidence 46888999999999999999854
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=91.18 E-value=0.51 Score=50.93 Aligned_cols=41 Identities=32% Similarity=0.476 Sum_probs=31.5
Q ss_pred CeEEEEEccCCCCCC---------hHHHHHHH----HhCCCCEEEEcCcccccc
Q 009637 198 PKRIAIVGDLGLTYN---------TTCTINHM----SSNEPDLVLLVGDVTYAN 238 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---------~~~~~~~l----~~~~pDfvl~~GDl~Yad 238 (530)
.+||++..|.|.++. ...++++| .+++.||||..||+...+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 699999999998863 23344444 357999999999999754
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=90.69 E-value=0.44 Score=48.82 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46889999999999999999854
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=90.66 E-value=0.4 Score=50.48 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=19.4
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 009637 389 RVEMEALLYSYGVDIVFNGHV 409 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~ 409 (530)
.+.++..|++++.++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 468899999999999999999
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.89 E-value=0.46 Score=48.96 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57888999999999999999855
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=89.60 E-value=0.52 Score=48.09 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788999999999999999854
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=87.20 E-value=1.7 Score=44.85 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=20.2
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++.+.|++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788999999999999999854
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=86.60 E-value=2.5 Score=49.97 Aligned_cols=95 Identities=21% Similarity=0.303 Sum_probs=52.7
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCC-ccEEEEecCCCCcceEEEEEEEEeeeccccCCcccc
Q 009637 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTV-ASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNY 149 (530)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~-~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~ 149 (530)
.++..|++|.|.... .++++|+|.+.... +. ....-|-....++......+... ..|
T Consensus 614 ~PsaPP~Nl~lev~s-StsVrVsW~pP~~~-----------t~ng~itgYkIRy~~~~~~~~~~~t~------v~~---- 671 (1381)
T KOG4221|consen 614 VPSAPPQNLSLEVVS-STSVRVSWLPPPSE-----------TQNGQITGYKIRYRKLSREDEVNETV------VKG---- 671 (1381)
T ss_pred CCCCCCcceEEEecC-CCeEEEEccCCCcc-----------cccceEEEEEEEecccCcccccceee------ccc----
Confidence 566678889887655 89999999885431 11 12222332221111111111100 001
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCC
Q 009637 150 TSGIIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLP 190 (530)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 190 (530)
....-.+++|+|+|.|.+||..-+ .+..|++.++.|+-
T Consensus 672 ---n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 672 ---NTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred ---chhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 111123467999999999996432 23678889998864
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=86.05 E-value=1.7 Score=44.72 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 009637 389 RVEMEALLYSYGVDIVFNGHV 409 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~ 409 (530)
.+++++.+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 468889999999999999997
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=85.31 E-value=6.5 Score=44.84 Aligned_cols=38 Identities=29% Similarity=0.471 Sum_probs=31.3
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 191 (530)
..+|+|+||+|||.|-+||.... -+..|....|.|.+.
T Consensus 497 ~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 497 TTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred cceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 35789999999999999996432 347889999999886
|
|
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=84.25 E-value=11 Score=29.01 Aligned_cols=22 Identities=27% Similarity=0.487 Sum_probs=18.6
Q ss_pred EEEEEeCCCCCCCEEEEEEeeC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
..++.|.+|.|+++|.++|..-
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEE
Confidence 4678889999999999999654
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=81.31 E-value=2 Score=38.92 Aligned_cols=41 Identities=24% Similarity=0.429 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 390 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 390 ~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
+.+.-|-++.+||+.+.||+|.++... -+|-.||..|++-.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaTG 137 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSATG 137 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcccC
Confidence 356666778899999999999998874 47888887776543
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=80.21 E-value=0.89 Score=43.60 Aligned_cols=83 Identities=12% Similarity=0.279 Sum_probs=42.1
Q ss_pred EEEEccCCCCCCh--HHHHHHH----H-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHH---HHH
Q 009637 201 IAIVGDLGLTYNT--TCTINHM----S-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW---DYW 270 (530)
Q Consensus 201 f~v~gD~g~~~~~--~~~~~~l----~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~w---d~~ 270 (530)
|++++|.+...+. .+.++++ . +.+|+.+|++|+++.......... .....+.... ..+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 6788998887432 2233333 3 457999999999996432110000 0000111111 222
Q ss_pred HHHHHHhhhcCCeEEccCCcccccc
Q 009637 271 GRFMQNLVSKVPIMVVEGNHEIEAQ 295 (530)
Q Consensus 271 ~~~l~~l~~~vP~~~v~GNHD~~~~ 295 (530)
.+.+..+...++++.+||+||....
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHhhcccccEEEEeCCCcccccc
Confidence 3445556678999999999998643
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 530 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 5e-51 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 6e-51 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 6e-51 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 5e-48 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 530 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-110 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-110 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 1e-39 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 7e-27 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 3e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 1e-09 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 2e-08 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 5e-07 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 6e-06 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 5e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 334 bits (857), Expect = e-110
Identities = 144/471 (30%), Positives = 207/471 (43%), Gaps = 95/471 (20%)
Query: 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFN-HDSIWITWITGEFQIGDNIKPLDPKTVASFV 117
D+P + R P+Q+ ++ ++ I+W+T + + +S V
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSSAV 49
Query: 118 RYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI 177
RY + + A G Y NY+SG IHH + L+ N KYYY+ G +
Sbjct: 50 RYWSEKNGRKRIAKGKMSTYRFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLRN- 101
Query: 178 PAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHM--SSNEPDLVLLVGDVT 235
+ + F T P +G P ++GDLG ++++ T++H S + VL VGD++
Sbjct: 102 --TTRRFSFITPPQTGLDV-PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLS 158
Query: 236 YANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE-- 293
YA+ Y + RWD WGRF + V+ P + GNHEIE
Sbjct: 159 YADRYPNH-------------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199
Query: 294 -AQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352
+ F +S R+ P E S S S F+YS H I+L +Y +Y + QY WL+
Sbjct: 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLK 259
Query: 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 412
K+L V RS TPWL+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAY
Sbjct: 260 KELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAY 319
Query: 413 ERSNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPD 461
ERS RV N PV+ITIGD GN
Sbjct: 320 ERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG--------------------- 358
Query: 462 PYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFV 512
QP+YSAFRE+SFGHG+ ++ + +
Sbjct: 359 ---------------VIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHF 394
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 332 bits (853), Expect = e-110
Identities = 143/467 (30%), Positives = 202/467 (43%), Gaps = 94/467 (20%)
Query: 55 GNAVDIPDTDPLVRRRVTGFEPEQLSVSLSFN-HDSIWITWITGEFQIGDNIKPLDPKTV 113
VD+P + P+Q+ ++ + I+W T + G
Sbjct: 4 AEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAG----------- 52
Query: 114 ASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCG 173
A+ V Y + + A G + Y NYTS IHH + LE + KYYY+ G
Sbjct: 53 ANKVFYWSENSKSQKRAMGTVVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLG 105
Query: 174 DPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN--EPDLVLLV 231
++F T P GP P ++GD+G T+++ T+ H N + VL +
Sbjct: 106 FGD---AKRQFWFVTPPKPGP-DVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFM 161
Query: 232 GDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291
GD++Y+N + + RWD WGRF + V+ P + GNHE
Sbjct: 162 GDLSYSNRWPNH-------------------DNNRWDTWGRFSERSVAYQPWIWTAGNHE 202
Query: 292 IE---AQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 348
I+ Q FV +++R+ P E SGS +Y+ H I+L +Y + K QY
Sbjct: 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQY 262
Query: 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 408
KW +L V+RS TPWL+ H P Y+SY +HY E E MR E Y VDIVF+GH
Sbjct: 263 KWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGH 322
Query: 409 VHAYERSNRVFNYTLD-----------PCGPVHITIGDGGNLEKMSITHADEPGNCPEPS 457
VH+YERS RV N + PV+ITIGDGGN E ++
Sbjct: 323 VHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLA-------------- 368
Query: 458 STPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEV 504
QP YSAFRE+SFGHGI ++
Sbjct: 369 ----------------------SEMTQPQPSYSAFREASFGHGIFDI 393
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 1e-39
Identities = 53/310 (17%), Positives = 91/310 (29%), Gaps = 64/310 (20%)
Query: 196 SYPKRIAIVGDLGLTYNTTCTINH-----------MSSNEPDLVLLVGDVTYANLYLTNG 244
+ R VGD G N + + D +L +GD Y
Sbjct: 4 TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFT------ 57
Query: 245 TGSDCYSCSFSKTPIHETYQPRWD--YWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQT-F 301
+H+ R+ + F + VP V+ GNH+ Q +
Sbjct: 58 -------------GVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY 104
Query: 302 VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLG-----------------AYISYDKS 344
S R+ FPS F + + ML + +
Sbjct: 105 SKISKRWNFPS--PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA 162
Query: 345 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIV 404
Q W++K LA + +++ H P +S + + C+ ++ LL ++ V
Sbjct: 163 RTQLAWIKKQLAA---AKEDYVLVAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAY 217
Query: 405 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYM 464
GH H + D G + G G ++ P + +
Sbjct: 218 LCGHDHNLQY-------LQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSL 270
Query: 465 GGFCATNFTS 474
GGF T
Sbjct: 271 GGFAYVEITP 280
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 7e-27
Identities = 37/295 (12%), Positives = 70/295 (23%), Gaps = 74/295 (25%)
Query: 198 PKRIAIVGDLGLTYNTTCTI-----NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC 252
R A +GD G + + ++ G +
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGV------------- 49
Query: 253 SFSKTPIHETYQPRWDYWGRFMQNLVS---KVPIMVVEGNHEIEAQAGNQ---------- 299
P W + + +P V G + Q
Sbjct: 50 -------KGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIE 102
Query: 300 ----------TFVAYSSRFAFPS---------EESGSLSSFYYSFNAGGIHFIML----- 335
++ P+ S S FI +
Sbjct: 103 KNGETSIEKDADATNYPKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVL 162
Query: 336 -GAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394
+ + L+ L+ + +++ P YSS + R + + +
Sbjct: 163 SSNFPYKKIHEKAWNDLKSQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLP 219
Query: 395 LLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADE 449
LL VD+ +GH + E ++ HIT G G + S +
Sbjct: 220 LLKDAEVDLYISGHDNNMEV--------IEDNDMAHITCGSGSMSQGKSGMKNSK 266
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 64.8 bits (157), Expect = 3e-11
Identities = 41/289 (14%), Positives = 84/289 (29%), Gaps = 58/289 (20%)
Query: 173 GDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTT---CTINHMSSNEPDLVL 229
+ S+ +DV+YF +++ K +A L Y+ + + S + D+++
Sbjct: 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLI 97
Query: 230 LVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGN 289
+ GD+T NG + HE + + + + VV GN
Sbjct: 98 ISGDLTN------NGEKTS-----------HEELAKKLTQVEK------NGTQVFVVPGN 134
Query: 290 HEI---------------EAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN-AGGIHFI 333
H+I F S F + S S Y + + +
Sbjct: 135 HDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194
Query: 334 MLGAYISYDK------------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH 381
ML I + W+++ A ++ + H +
Sbjct: 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQ 254
Query: 382 YREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430
++ L +D +GH+H + + +
Sbjct: 255 KGYTINYNQQVIDALTEGAMDFSLSGHIHT----QNIRSAKSTDGKEIT 299
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 1e-09
Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 43/193 (22%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 283
PD ++ GD L + G Y+ F L +
Sbjct: 66 RPDAIVFTGD-------LADK-GEP------------AAYRKLRGLVEPFAAQL--GAEL 103
Query: 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343
+ V GNH+ + + +E+ S++ G+ I+L +
Sbjct: 104 VWVMGNHD-DRAELRKFL----------LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 152
Query: 344 SGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALLY 397
G Q WL ++LA ++A HPP S +R + +L
Sbjct: 153 HGEIRASQLGWLAEELATPAP--DGTILALHHPPIPSV--LDMAVTVELRDQAALGRVLR 208
Query: 398 SYGVDIVFNGHVH 410
V + GH+H
Sbjct: 209 GTDVRAILAGHLH 221
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 2e-08
Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 46/195 (23%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-KVP 282
PD V++ GD + N G E YQ Q L S P
Sbjct: 41 RPDAVVVSGD-------IVN-CGRP------------EEYQ-------VARQILGSLNYP 73
Query: 283 IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD 342
+ ++ GNH+ +A F+ Y + ++ + + + + + +
Sbjct: 74 LYLIPGNHDDKA-----LFLEYLQPL--CPQLGSDANNMRCAVDDFATRLLFIDSSRAGT 126
Query: 343 KSGH----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR--VEMEALL 396
G WLE L P + HPP + + + AL+
Sbjct: 127 SKGWLTDETISWLEAQLFEGGD--KPATIFMHHPPLPLG--NAQMDPIACENGHRLLALV 182
Query: 397 YSY-GVDIVFNGHVH 410
+ + +F GH H
Sbjct: 183 ERFPSLTRIFCGHNH 197
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 50.7 bits (120), Expect = 5e-07
Identities = 38/273 (13%), Positives = 64/273 (23%), Gaps = 83/273 (30%)
Query: 215 CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274
+ V+ +GD+ + + M
Sbjct: 42 DAVLQWRRERVQCVVQLGDIIDGH---------------------NRRRDASDRALDTVM 80
Query: 275 QNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSR-----FAFPSEESGSLSSFYYSFNAG 328
L + V + V GNHE + + + S+ G Y A
Sbjct: 81 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 140
Query: 329 GIHFIMLGAY----------------------------------------------ISYD 342
F++L AY +
Sbjct: 141 NFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGG 200
Query: 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG-V 401
S Q +WL+ L D L+ + P ++ + ++L S+ V
Sbjct: 201 FSEQQLQWLDAVLTLSDHKQERVLIFSHLPVH--PCAADPICLAWNHEAVLSVLRSHQSV 258
Query: 402 DIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434
GH H D G HIT+
Sbjct: 259 LCFIAGHDHDG-------GRCTDSSGAQHITLE 284
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 47.1 bits (111), Expect = 6e-06
Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 23/227 (10%)
Query: 198 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
P+++ + + ++ +PD++++VG++ + ++
Sbjct: 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 64
Query: 257 TPIHETYQPRWDYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
IHE + +F + + V VV G ++ + + AY + A+P +
Sbjct: 65 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRA--AYEAETAYP---N 119
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQ---------YKWLEKDLANVDRSVTPWL 366
+ ++ G I G ++ + +++ K + + +
Sbjct: 120 IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPR--RLV 177
Query: 367 VATWHPPWYSSY---SSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
+ PP + V ++ S ++ GHV
Sbjct: 178 TIFYTPPIGEFVDRTPEDPKHHGSAVV--NTIIKSLNPEVAIVGHVG 222
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 5e-04
Identities = 25/221 (11%), Positives = 55/221 (24%), Gaps = 45/221 (20%)
Query: 199 KRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257
+ I + G + D + L+G++ S Y+ F
Sbjct: 6 RYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMP------KAAKSRDYAAFF--- 56
Query: 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGS 317
R + +P V G +A A + P
Sbjct: 57 --------------RILSEA--HLPTAYVPGPQ--DAPIWEYLREAANVELVHP---EMR 95
Query: 318 LSSFYYSFNAGGIHFIMLGAYISYDKSGHQY------KWLEKDLANVDRSVTPW--LVAT 369
++F G +G I+ + ++ W+ + + + +
Sbjct: 96 NVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLF 155
Query: 370 WHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
P Y + E+ L+ ++ +V
Sbjct: 156 HTMP-YHKGLNEQGSH-----EVAHLIKTHNPLLVLVAGKG 190
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.98 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.95 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.89 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.87 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.87 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.79 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.55 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.52 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.41 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.25 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.23 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.21 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.14 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.13 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.11 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.04 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.03 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.03 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.0 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 98.99 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.91 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 98.89 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 98.82 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 98.79 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 98.71 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.56 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.52 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.44 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.43 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.33 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.28 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.28 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.26 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.24 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.15 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.14 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.1 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.06 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.77 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.65 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.47 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.82 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 96.63 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 96.55 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 96.45 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.43 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.29 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 96.27 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.18 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.13 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.08 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.07 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 95.99 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 95.92 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 95.91 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.9 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.85 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 95.81 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 95.76 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 95.75 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 95.71 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.67 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.66 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.63 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 95.51 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.5 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 95.38 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 95.38 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 95.36 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.31 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 95.28 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 95.28 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 95.21 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.16 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 95.0 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.0 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 94.94 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 94.93 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 94.84 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 94.82 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 94.81 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 94.79 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 94.78 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.76 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 94.73 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 94.68 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 94.68 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 94.63 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 94.6 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 94.57 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 94.57 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 94.57 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 94.44 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 94.35 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 94.34 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 94.26 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 94.25 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 94.16 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 94.13 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.12 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 94.11 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 94.1 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 94.06 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 94.05 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.02 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 94.01 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 93.92 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 93.87 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 93.87 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 93.87 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 93.87 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 93.84 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 93.79 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 93.74 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 93.6 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 93.51 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 93.43 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.11 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 93.08 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 93.06 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 92.95 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.68 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 92.63 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 92.62 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 92.45 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 92.42 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 92.39 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 92.29 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 92.26 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 92.25 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 92.13 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 92.12 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 92.02 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 91.97 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 91.91 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 91.88 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 91.77 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 91.75 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 91.53 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 91.39 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.28 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 91.09 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 90.72 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 90.71 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 90.54 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 90.27 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 90.22 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 90.02 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 89.91 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 89.61 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 89.54 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 89.5 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 89.21 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 88.97 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 88.85 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 88.56 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 87.72 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 87.7 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 87.42 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 87.12 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 86.7 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 86.57 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 86.43 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 86.15 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 85.92 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 85.43 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 85.31 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 84.54 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 84.35 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 83.84 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 83.73 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 83.55 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 83.42 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 83.35 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 82.83 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 82.73 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 82.57 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 82.51 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 81.07 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 80.6 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-68 Score=569.88 Aligned_cols=396 Identities=36% Similarity=0.646 Sum_probs=331.8
Q ss_pred CCCCCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcC-CCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEE
Q 009637 56 NAVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITG-EFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGH 133 (530)
Q Consensus 56 ~~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~m~V~W~T~-~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~ 133 (530)
.++|+|.++|+++.+....+|+||||++++++ ++|+|+|+|. +. ...++|+||++++.+..++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~------------~~~~~V~y~~~~~~~~~~~~~~ 72 (426)
T 1xzw_A 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDK------------AGANKVFYWSENSKSQKRAMGT 72 (426)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCC------------TTTTEEEEEETTCCCCEEEECE
T ss_pred ccccCCCCCCcccCCCCCCCCceEEEEECCCCCCeEEEEEEeCCCC------------CCCCEEEEecCCCCCceEEEEE
Confidence 46899999999999998899999999999986 8999999997 42 1357999999988888888888
Q ss_pred EEEeeeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEccCCCCCCh
Q 009637 134 SLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNT 213 (530)
Q Consensus 134 ~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD~g~~~~~ 213 (530)
+.+|+.. ++.++++|+|+|+||+|+|+|+|||+++ .+|++++|+|+|.++.. .++||+++||+|.....
T Consensus 73 ~~~~~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g---~~s~~~~f~T~p~~~~~-~~~~f~~~gD~~~~~~~ 141 (426)
T 1xzw_A 73 VVTYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPPKPGPD-VPYVFGLIGDIGQTHDS 141 (426)
T ss_dssp EECCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHH
T ss_pred EEEEEec-------CCcCCEEEEEEECCCCCCCEEEEEECCC---CccceeEEECCCCCCCC-CCeEEEEEEeCCCCCch
Confidence 7766532 3457899999999999999999999973 58999999999986654 47999999999987555
Q ss_pred HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCcc
Q 009637 214 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 291 (530)
Q Consensus 214 ~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD 291 (530)
..+++++.+. +|||||++||++|+++... ..+.+|+.|.+.++++.+.+|+|+++||||
T Consensus 142 ~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~-------------------~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD 202 (426)
T 1xzw_A 142 NTTLTHYEQNSAKGQAVLFMGDLSYSNRWPN-------------------HDNNRWDTWGRFSERSVAYQPWIWTAGNHE 202 (426)
T ss_dssp HHHHHHHHHCTTCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEECCCCGGG
T ss_pred HHHHHHHHhCCCCCCEEEeCCChhhcccCCc-------------------ccchHHHHHHHHHHHHHhcCCEEEeccccc
Confidence 6778888876 8999999999999754210 013579999999999988999999999999
Q ss_pred ccccc---cccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcccCCCCCEEEE
Q 009637 292 IEAQA---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVA 368 (530)
Q Consensus 292 ~~~~~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv 368 (530)
+.... ....|..|..+|.||.++++...+.||+|++|+++||+||++.++....+|++||+++|+++++++++|+||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv 282 (426)
T 1xzw_A 203 IDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIV 282 (426)
T ss_dssp CCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEE
T ss_pred cccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEE
Confidence 97542 134678899999999876666678999999999999999999877778999999999999988778899999
Q ss_pred EeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc-----------cCCCCcEEEEeCCCc
Q 009637 369 TWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT-----------LDPCGPVHITIGDGG 437 (530)
Q Consensus 369 ~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~-----------~~~~G~vyIv~G~gG 437 (530)
++|+|+|++...+..+...+|+.|+++|.+++||++|+||+|.|+|+.|+++.+ .+++|++||++|+||
T Consensus 283 ~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG 362 (426)
T 1xzw_A 283 LVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362 (426)
T ss_dssp ECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSC
T ss_pred EeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCc
Confidence 999999987654545556789999999999999999999999999999988765 347899999999999
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecCCcceEEEEEeecceeeeeeeec
Q 009637 438 NLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFVPLFLQ 517 (530)
Q Consensus 438 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~n~t~~~~~~~~~ 517 (530)
+.++....+. ..+|+||+||+.+|||++|+|.|.||+.|+++-+
T Consensus 363 ~~~~~~~~~~------------------------------------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~ 406 (426)
T 1xzw_A 363 NSEGLASEMT------------------------------------QPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRN 406 (426)
T ss_dssp CTTCCCCCBC------------------------------------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEET
T ss_pred cccccccccC------------------------------------CCCCCceeEEecCCCeEEEEEEcCCeEEEEEEEC
Confidence 9876531110 2578999999999999999999999999988755
Q ss_pred cCCCceeecccc
Q 009637 518 PKFNTMVTHGLF 529 (530)
Q Consensus 518 ~~~~~~~~~~~~ 529 (530)
.+.+.++.+-+|
T Consensus 407 ~dg~~~~~D~~~ 418 (426)
T 1xzw_A 407 QDGASVEADSLW 418 (426)
T ss_dssp TSCTTCCSEEEE
T ss_pred CCCCEEEeEEEE
Confidence 444333444433
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-67 Score=558.60 Aligned_cols=393 Identities=37% Similarity=0.651 Sum_probs=324.2
Q ss_pred CCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEe
Q 009637 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVY 137 (530)
Q Consensus 59 ~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 137 (530)
|+|.++|+++.+.....|+||||++++++ ++|+|+|.|.+. ...+.|+||++++.+..++.|++.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~------------~~~~~V~~~~~~~~~~~~~~g~~~~~ 69 (424)
T 2qfp_A 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMSTY 69 (424)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCCEEEEESSSCCCEEECCEEECC
T ss_pred CCCCCCCcccCCCCCCCCceEEEEecCCCCCeEEEEEECCCC------------CCCCEEEEEeCCCCCceEEEEEEEEE
Confidence 79999999999977789999999999875 899999999653 13578999999988888898888776
Q ss_pred eeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEccCCCCCChHHHH
Q 009637 138 DQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTI 217 (530)
Q Consensus 138 ~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD~g~~~~~~~~~ 217 (530)
+.. ++.++++|+|+|+||+|||+|+|||+.+ .+|++++|+|+|.++.. .++||+++||+|.......++
T Consensus 70 ~~~-------~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~---~~s~~~~f~T~p~~~~~-~~~~f~~igD~~~~~~~~~~l 138 (424)
T 2qfp_A 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPPQTGLD-VPYTFGLIGDLGQSFDSNTTL 138 (424)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCCCCCTT-CCEEEEEECSCTTBHHHHHHH
T ss_pred Eec-------CCCCCEEEEEEECCCCCCCEEEEEECCC---CccceEEEECCCCCCCC-CCeEEEEEEeCCCCCChHHHH
Confidence 531 3457899999999999999999999975 57999999999987654 479999999999875555678
Q ss_pred HHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCcccccc
Q 009637 218 NHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ 295 (530)
Q Consensus 218 ~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~ 295 (530)
+++.+. +|||||++||++|++++.. ..+.+|+.|.+.++++.+.+|+|+++||||+...
T Consensus 139 ~~~~~~~~~~D~vl~~GDl~y~~~~~~-------------------~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~ 199 (424)
T 2qfp_A 139 SHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFA 199 (424)
T ss_dssp HHHHTCSSCCCEEEECSCCSCGGGSGG-------------------GCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCB
T ss_pred HHHHhCCCCCCEEEEcCcccccccccc-------------------ccchHHHHHHHHHHHHHhcCCeEeecCCcccccC
Confidence 888775 8999999999999754210 0135799999999999889999999999999743
Q ss_pred c---cccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCC
Q 009637 296 A---GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHP 372 (530)
Q Consensus 296 ~---~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~ 372 (530)
. ....|..|..+|.+|..+.....+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+||++|+
T Consensus 200 ~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~ 279 (424)
T 2qfp_A 200 PEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHS 279 (424)
T ss_dssp GGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSS
T ss_pred CcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCc
Confidence 2 1235788999999997655566789999999999999999987776667999999999999887778999999999
Q ss_pred CCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc-----------cCCCCcEEEEeCCCccccc
Q 009637 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT-----------LDPCGPVHITIGDGGNLEK 441 (530)
Q Consensus 373 P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~-----------~~~~G~vyIv~G~gG~~e~ 441 (530)
|+|++...++.+...+|+.|+++|.+++||++|+||+|.|+|++|+++.. .+++|++||++|+||+.++
T Consensus 280 P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~~ 359 (424)
T 2qfp_A 280 PLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGV 359 (424)
T ss_dssp CSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTSC
T ss_pred CceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCccc
Confidence 99987655555556789999999999999999999999999999986532 2568999999999999886
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecCCcceEEEEEeecceeeeeeeeccCCC
Q 009637 442 MSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFVPLFLQPKFN 521 (530)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~n~t~~~~~~~~~~~~~ 521 (530)
.... |. ..+|+||+||+.+|||++|+|.|.||+.|+++-+.+..
T Consensus 360 ~~~~--------------------------~~----------~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~ 403 (424)
T 2qfp_A 360 IDSN--------------------------MI----------QPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGV 403 (424)
T ss_dssp CCCC--------------------------BC----------SSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCT
T ss_pred cCcc--------------------------CC----------CCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCC
Confidence 5311 10 35789999999999999999999999999866443333
Q ss_pred ceeecccc
Q 009637 522 TMVTHGLF 529 (530)
Q Consensus 522 ~~~~~~~~ 529 (530)
.|+++-+|
T Consensus 404 ~~~~D~~~ 411 (424)
T 2qfp_A 404 AVEADSVW 411 (424)
T ss_dssp TCCSEEEE
T ss_pred EEeeeEEE
Confidence 33455444
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-36 Score=324.19 Aligned_cols=287 Identities=22% Similarity=0.286 Sum_probs=202.7
Q ss_pred cEEEEecCCCC--cceEEEEEEEEeeeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCC
Q 009637 115 SFVRYGTSRTN--LNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (530)
Q Consensus 115 ~~V~yg~~~~~--~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 192 (530)
..|+|-.+.+. ....+.|...+. ...+++|+|+|+||+|+|+|+|||+.++ .+|.+++|||+|.+
T Consensus 44 ~~v~~eva~d~~f~~~v~~g~~~a~-----------~~~~~t~~v~v~gL~P~t~Y~Yr~~~~~--~~S~~g~frT~P~~ 110 (527)
T 2yeq_A 44 VPVKWEVAKDEHFRKIVRKGTEMAK-----------PSLAHSVHVEADGLEPNKVYYYRFKTGH--ELSPVGKTKTLPAP 110 (527)
T ss_dssp EEEEEEEESSTTSSSEEEEEEEEEC-----------GGGTTEEEEEECSCCTTCEEEEEEEETT--EECCCEEEECCCCT
T ss_pred eEEEEEEecCCccccceEeeeEEec-----------CCCceEEEeecCCcCCCCEEEEEEEeCC--CcCCCceEEcCCCC
Confidence 45666555443 334555655432 1246899999999999999999999865 68999999999987
Q ss_pred CCCCCCeEEEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCC-CCCccccchHHHHHHH
Q 009637 193 GPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS-KTPIHETYQPRWDYWG 271 (530)
Q Consensus 193 ~~~~~~~rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~-~~~~~~~y~~~wd~~~ 271 (530)
+....++||+++||.+.......++.+|.+.+||||||+||++|++.....+.....-..... ....-+.|+.+|..+.
T Consensus 111 ~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~ 190 (527)
T 2yeq_A 111 GANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYR 190 (527)
T ss_dssp TCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHH
T ss_pred CCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHh
Confidence 654458999999999874344467888888899999999999998754211100000000000 0111234566665554
Q ss_pred --HHHHHhhhcCCeEEccCCcccccccccc---------ch-----HHHhhhc-CCCCCC----CCCCCcceEEEEcCc-
Q 009637 272 --RFMQNLVSKVPIMVVEGNHEIEAQAGNQ---------TF-----VAYSSRF-AFPSEE----SGSLSSFYYSFNAGG- 329 (530)
Q Consensus 272 --~~l~~l~~~vP~~~v~GNHD~~~~~~~~---------~f-----~~y~~~f-~~P~~~----~~~~~~~yYsf~~G~- 329 (530)
..++.+.+.+|+|+++||||+.++.... .| .+++.+| .||... .+.....||+|++|+
T Consensus 191 ~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~l 270 (527)
T 2yeq_A 191 SDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNL 270 (527)
T ss_dssp TCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTT
T ss_pred CCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCc
Confidence 3577888899999999999998653321 01 2333333 244321 123457899999999
Q ss_pred EEEEEEcccccCC----------------------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCC--------
Q 009637 330 IHFIMLGAYISYD----------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS-------- 379 (530)
Q Consensus 330 v~fI~Ldt~~~~~----------------------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~-------- 379 (530)
++||+||+..... .+.+|++||+++|++ ++++|+||+.|+|++....
T Consensus 271 v~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~~~~~~~~g~~~~~ 347 (527)
T 2yeq_A 271 ASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFFAKWNFGTSASPIY 347 (527)
T ss_dssp EEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCCSCCCSSCSSSCCE
T ss_pred ceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcccccccCCCccccc
Confidence 9999999964221 268999999999998 5689999999999987532
Q ss_pred --CCCchhHHHHHHHHHHHHHcCCc--EEEEccccCceeeee
Q 009637 380 --SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYERSNR 417 (530)
Q Consensus 380 --~~~~~~~~~r~~l~~ll~k~~Vd--lvlsGH~H~yeR~~p 417 (530)
..+......|+.|+++|.+++|+ +||+||+|.++++..
T Consensus 348 ~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 348 SMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp ETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred CccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 22334456799999999999984 999999999999853
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-32 Score=277.68 Aligned_cols=235 Identities=18% Similarity=0.246 Sum_probs=166.4
Q ss_pred CeEEEEEccCCCCCChHH-HH----HHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHH-H
Q 009637 198 PKRIAIVGDLGLTYNTTC-TI----NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW-G 271 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~~~-~~----~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~-~ 271 (530)
++||+++||+|.+...+. +. +.+.+.+|||||++||++|. +.. +. ...+|... .
T Consensus 3 ~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~-G~~--~~-----------------~d~~~~~~f~ 62 (342)
T 3tgh_A 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFID-GVK--GL-----------------NDPAWKNLYE 62 (342)
T ss_dssp CEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTT-CCC--ST-----------------TCTHHHHHTT
T ss_pred eEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccC-CCC--cC-----------------ccHHHHHHHH
Confidence 699999999997643322 22 22335799999999999984 210 00 12344432 2
Q ss_pred HHHHHh--hhcCCeEEccCCccccccccc-cchHH-------------------HhhhcCCCCCCCCCCCcceEEE----
Q 009637 272 RFMQNL--VSKVPIMVVEGNHEIEAQAGN-QTFVA-------------------YSSRFAFPSEESGSLSSFYYSF---- 325 (530)
Q Consensus 272 ~~l~~l--~~~vP~~~v~GNHD~~~~~~~-~~f~~-------------------y~~~f~~P~~~~~~~~~~yYsf---- 325 (530)
+.++.+ ..++|++.|+||||+..+... ..+.. ...||.|| +.||+|
T Consensus 63 ~~~~~~~~~~~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P--------~~yY~~~~~f 134 (342)
T 3tgh_A 63 DVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMP--------NYWYHYFTHF 134 (342)
T ss_dssp TTSCCGGGTTCSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECS--------SSSEEEEEEE
T ss_pred HHhhhhhhhhCCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCC--------cceEEEEEEe
Confidence 223322 357999999999999754221 11111 23455666 357765
Q ss_pred Ec---------C----cEEEEEEcccccCC----------CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC
Q 009637 326 NA---------G----GIHFIMLGAYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY 382 (530)
Q Consensus 326 ~~---------G----~v~fI~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~ 382 (530)
.. | .++||+|||..... ...+|++||+++|++ ++|+||++|+|+|++.. +
T Consensus 135 ~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~-~- 207 (342)
T 3tgh_A 135 TVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY-S- 207 (342)
T ss_dssp EEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST-T-
T ss_pred eccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC-C-
Confidence 32 3 49999999964321 135899999999943 47999999999998753 2
Q ss_pred chhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCC
Q 009637 383 REAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDP 462 (530)
Q Consensus 383 ~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~ 462 (530)
.....+++.|++||.+|+||++|+||+|.|+|..+ +|+.||++|+||......
T Consensus 208 ~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~------------------- 260 (342)
T 3tgh_A 208 RGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKS------------------- 260 (342)
T ss_dssp CCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCC-------------------
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEECCCcceeEEee--------CCcEEEEeCccccccccC-------------------
Confidence 23356789999999999999999999999999874 679999999998753211
Q ss_pred CCCCccccccccCCCCCCCCCCCCCCccceecCCcceEEEEEeecceeeeeeee
Q 009637 463 YMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVLSLSLLFVPLFL 516 (530)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~~l~v~n~t~~~~~~~~ 516 (530)
...++|++|+...+||.+++| +.+++.++.+-
T Consensus 261 ---------------------~~~~~~s~f~~~~~Gf~~l~v-~~~~l~~~~~~ 292 (342)
T 3tgh_A 261 ---------------------GMKNSKSLFFSSDIGFCVHEL-SNNGIVTKFVS 292 (342)
T ss_dssp ---------------------SSCCTTEEEEECSSEEEEEEE-ETTEEEEEEEE
T ss_pred ---------------------CCCCCcceeecCCCcEEEEEE-ECCEEEEEEEE
Confidence 023579999999999999998 56789997765
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=241.51 Aligned_cols=200 Identities=23% Similarity=0.350 Sum_probs=140.0
Q ss_pred CeEEEEEccCCCCCC-------h---HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHH
Q 009637 198 PKRIAIVGDLGLTYN-------T---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-------~---~~~~~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~ 266 (530)
++||+++||+|.... . ...+.+ +.+.+|||||++||++|.++....+ ..+
T Consensus 6 ~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~-------------------~~~ 66 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAK-------------------DKR 66 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTT-------------------CTH
T ss_pred ceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcc-------------------hHH
Confidence 699999999998642 1 122333 3346999999999999864321110 112
Q ss_pred HHHHHHHHHHhh----h-cCCeEEccCCccccccccc-cchHHHhhhcCCCCCCCCCCCcceEEEEc------CcEEEEE
Q 009637 267 WDYWGRFMQNLV----S-KVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIM 334 (530)
Q Consensus 267 wd~~~~~l~~l~----~-~vP~~~v~GNHD~~~~~~~-~~f~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~ 334 (530)
| .+.++.+. . .+|+++++||||....... ..+.....+|.+| ..||++++ ++++||+
T Consensus 67 ~---~~~~~~~~~~~~l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~ 135 (313)
T 1ute_A 67 F---QETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFM 135 (313)
T ss_dssp H---HHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEE
T ss_pred H---HHHHHHHcCchhhcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEE
Confidence 2 23333321 2 7999999999998643110 0111112344444 35888887 5999999
Q ss_pred EcccccC-----------------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHH
Q 009637 335 LGAYISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 397 (530)
Q Consensus 335 Ldt~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~ 397 (530)
||+.... ....+|++||+++|++.. .+|+|+++|+|+++.... ....++++.+.++|.
T Consensus 136 lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~ 210 (313)
T 1ute_A 136 LDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLT 210 (313)
T ss_dssp CCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHH
T ss_pred EEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHH
Confidence 9986411 125799999999999863 479999999999876432 223466789999999
Q ss_pred HcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccc
Q 009637 398 SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 398 k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~ 439 (530)
+++|+++|+||+|.+++..+ .+|+.||++|++|..
T Consensus 211 ~~~v~~~l~GH~H~~~~~~~-------~~g~~~i~~gs~~~~ 245 (313)
T 1ute_A 211 THKVTAYLCGHDHNLQYLQD-------ENGLGFVLSGAGNFM 245 (313)
T ss_dssp HTTCSEEEECSSSSEEEEEC-------TTCCEEEEECBSSCC
T ss_pred HcCCcEEEECChhhhhhccC-------CCCceEEEECCCcCc
Confidence 99999999999999998863 479999999999864
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=203.96 Aligned_cols=196 Identities=15% Similarity=0.184 Sum_probs=137.1
Q ss_pred CCeEEEEEccCCCCC---------C----hHHHHHHHHh--CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccc
Q 009637 197 YPKRIAIVGDLGLTY---------N----TTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~---------~----~~~~~~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~ 261 (530)
.++||++++|+|... . ...+++.+.+ .++|+||++||+++. |.
T Consensus 24 ~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~------~~---------------- 81 (330)
T 3ib7_A 24 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADK------GE---------------- 81 (330)
T ss_dssp CSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTT------CC----------------
T ss_pred CCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC----------------
Confidence 379999999999742 1 2345666666 799999999999952 22
Q ss_pred cchHHHHHHHHHHHHhh--hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccc
Q 009637 262 TYQPRWDYWGRFMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 339 (530)
Q Consensus 262 ~y~~~wd~~~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~ 339 (530)
...|..+.+.++++. .++|+++++||||.. ..+....... + ......+|++++++++||+||+..
T Consensus 82 --~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~-----~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~ 148 (330)
T 3ib7_A 82 --PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSV 148 (330)
T ss_dssp --HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCC
T ss_pred --HHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH-----HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCC
Confidence 234566667777663 379999999999974 1222221111 1 123467899999999999999865
Q ss_pred cC----CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 340 SY----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 340 ~~----~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
.. ....+|++||++.|++.... + +|+++|+|++......... ....++.+.+++.+++|+++|+||+|....
T Consensus 149 ~~~~~~~~~~~q~~wl~~~l~~~~~~--~-~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~ 225 (330)
T 3ib7_A 149 PGHHHGEIRASQLGWLAEELATPAPD--G-TILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTN 225 (330)
T ss_dssp TTCCSBCCCHHHHHHHHHHTTSCCTT--C-EEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEE
T ss_pred CCCCCCccCHHHHHHHHHHHHhcccC--C-eEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCccc
Confidence 22 34789999999999986432 2 6667777766543221111 112357888999999999999999999885
Q ss_pred eeecccCccCCCCcEEEEeCCCcc
Q 009637 415 SNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 415 ~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
.. -+|+.+++.|+.+.
T Consensus 226 ~~--------~~g~~~~~~gs~~~ 241 (330)
T 3ib7_A 226 AT--------FVGIPVSVASATCY 241 (330)
T ss_dssp EE--------ETTEEEEECCCSSC
T ss_pred ce--------ECCEEEEecCccee
Confidence 43 26888888888775
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=198.94 Aligned_cols=205 Identities=19% Similarity=0.163 Sum_probs=135.0
Q ss_pred CeEEEEEccCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCC
Q 009637 198 PKRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--------------------~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~ 257 (530)
++||++++|+|.... ...+++.+.+.+||+||++||+++.....
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~---------------- 68 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR---------------- 68 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH----------------
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCc----------------
Confidence 699999999998642 12344555567999999999999632100
Q ss_pred CccccchHHHHHHHHHHHHhh-hcCCeEEccCCccccccccccchHHHhhhcCCCCCC--------CCCCCcceEEEEc-
Q 009637 258 PIHETYQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE--------SGSLSSFYYSFNA- 327 (530)
Q Consensus 258 ~~~~~y~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~--------~~~~~~~yYsf~~- 327 (530)
....++.+.+.++.+. ..+|+++++||||..... ...+...+..+... -...+..||+|+.
T Consensus 69 -----~~~~~~~~~~~~~~l~~~~~p~~~v~GNHD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 139 (322)
T 2nxf_A 69 -----RDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPA 139 (322)
T ss_dssp -----TTCHHHHHHHHHHHHHTTCSEEEECCCHHHHHHCC----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEE
T ss_pred -----chHHHHHHHHHHHHHHhcCCcEEEecCCCCcccCC----HHHHhhhhCCcccccccccccccCCCCceEEEEecC
Confidence 0011333333444332 278999999999984211 12344444311000 0002357899998
Q ss_pred CcEEEEEEccccc----------------------------------------------CCCCHHHHHHHHHHHhcccCC
Q 009637 328 GGIHFIMLGAYIS----------------------------------------------YDKSGHQYKWLEKDLANVDRS 361 (530)
Q Consensus 328 G~v~fI~Ldt~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~r~ 361 (530)
++++||+||+... .....+|++||+++|+++.++
T Consensus 140 ~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~ 219 (322)
T 2nxf_A 140 PNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK 219 (322)
T ss_dssp TTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc
Confidence 9999999998641 012489999999999986432
Q ss_pred CCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCcEEEEeCCC
Q 009637 362 VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 362 ~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
..++||++|+|++...... ......++.+.+++.++ +|+++|+||+|.+++.. +.+|+.|+++|+.
T Consensus 220 -~~~~iv~~H~p~~~~~~~~-~~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~-------~~~g~~~i~~~~~ 286 (322)
T 2nxf_A 220 -QERVLIFSHLPVHPCAADP-ICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEGV 286 (322)
T ss_dssp -TCEEEEEESSCCCTTSSCG-GGSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCCG
T ss_pred -CCcEEEEEccCCCCCCCCc-cccccCHHHHHHHHhcCCCeEEEEcCCcCCCCcee-------ccCCceEEEecch
Confidence 2358999999998754321 01111356888999999 79999999999999874 2368888887765
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-21 Score=188.26 Aligned_cols=191 Identities=16% Similarity=0.210 Sum_probs=129.1
Q ss_pred eEEEEEccCCCCC---------Ch----HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 199 KRIAIVGDLGLTY---------NT----TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 199 ~rf~v~gD~g~~~---------~~----~~~~~~l~~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
+||++++|+|... .. .++++.+.+. ++|+||++||+++. |.
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 56 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNC------GR------------------ 56 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSS------CC------------------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCC------CC------------------
Confidence 5899999999874 11 3345555554 68999999999952 22
Q ss_pred hHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchH-HHhhhcCCCCCCCCCC-CcceEEEEcCcEEEEEEcccccC
Q 009637 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV-AYSSRFAFPSEESGSL-SSFYYSFNAGGIHFIMLGAYISY 341 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~-~y~~~f~~P~~~~~~~-~~~yYsf~~G~v~fI~Ldt~~~~ 341 (530)
...|+.+.+.++.+ ++|+++++||||.... +. .+...| ++.. .. +..+|+++.++++|++||+....
T Consensus 57 ~~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~-----~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~i~ld~~~~~ 125 (274)
T 3d03_A 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKAL-----FLEYLQPLC-PQLG---SDANNMRCAVDDFATRLLFIDSSRAG 125 (274)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHHH-----HHHHHGGGS-GGGC---SCGGGCCEEECSSSSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCCCCHHH-----HHHHhhhhh-cCcc---cCCCceEEEEEeCCEEEEEEeCCCCC
Confidence 23455566666655 6899999999998521 11 121111 1100 11 34689999999999999986432
Q ss_pred ----CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceee
Q 009637 342 ----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERS 415 (530)
Q Consensus 342 ----~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~ 415 (530)
....+|++||++.|++.. ..++|+++|+|++......... ....++.+.+++.++ +|+++|+||+|..+..
T Consensus 126 ~~~~~~~~~~~~wl~~~l~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (274)
T 3d03_A 126 TSKGWLTDETISWLEAQLFEGG---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (274)
T ss_dssp CSSBCCCHHHHHHHHHHHHHHT---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred CCCCeeCHHHHHHHHHHHHhCC---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhh
Confidence 347899999999999852 3468999999988653221111 011246788999999 8999999999998775
Q ss_pred eecccCccCCCCcEEEEeCC
Q 009637 416 NRVFNYTLDPCGPVHITIGD 435 (530)
Q Consensus 416 ~pv~~~~~~~~G~vyIv~G~ 435 (530)
. .+|..++++++
T Consensus 203 ~--------~~g~~~~~~pg 214 (274)
T 3d03_A 203 Q--------YRQALISTLPG 214 (274)
T ss_dssp E--------ETTEEEEECCC
T ss_pred e--------ECCEEEEEcCC
Confidence 3 14655555543
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.4e-18 Score=181.02 Aligned_cols=194 Identities=15% Similarity=0.232 Sum_probs=126.0
Q ss_pred CCeEEEEEccCCCCCC-----------------------hH----HHHHHHHhCCCCEEEEcCccccccccccCCCCCcc
Q 009637 197 YPKRIAIVGDLGLTYN-----------------------TT----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDC 249 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~-----------------------~~----~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~c 249 (530)
.++||++++|+|.... .. .+++.+.+.+||+||++||+++. |.
T Consensus 38 ~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~---- 107 (443)
T 2xmo_A 38 RNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN------GE---- 107 (443)
T ss_dssp CCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS------CC----
T ss_pred CCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC----
Confidence 3699999999997531 12 23444556789999999999952 22
Q ss_pred cccCCCCCCccccchHHHHHHHHHHHHhh-hcCCeEEccCCccccccccc------------cchHHHhhhcCCCCCC-C
Q 009637 250 YSCSFSKTPIHETYQPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGN------------QTFVAYSSRFAFPSEE-S 315 (530)
Q Consensus 250 y~~~~~~~~~~~~y~~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~~~~~------------~~f~~y~~~f~~P~~~-~ 315 (530)
...++.+.+.++.+. ..+|+++++||||....... .....|...|.-..-. .
T Consensus 108 --------------~~~~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (443)
T 2xmo_A 108 --------------KTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDA 173 (443)
T ss_dssp --------------HHHHHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTC
T ss_pred --------------HHHHHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhh
Confidence 123455566666663 37899999999998642110 0123344444311100 0
Q ss_pred ---CCCCcceEEEEcCcEEEEEEccccc------------CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCC
Q 009637 316 ---GSLSSFYYSFNAGGIHFIMLGAYIS------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS 380 (530)
Q Consensus 316 ---~~~~~~yYsf~~G~v~fI~Ldt~~~------------~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~ 380 (530)
......|+.+..++++||+||+... .....+|++||++.|+++.... ..+|+++|+|++.....
T Consensus 174 ~~~~~~~~~y~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~~-~~~Iv~~H~p~~~~~~~ 252 (443)
T 2xmo_A 174 ISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNG-AKLIPVLHHNLTDHNDV 252 (443)
T ss_dssp SEECSSSSCEEECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHTT-CEEEEECSSBSSCSSCC
T ss_pred hccCCCCceEEEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHcC-CeEEEEECCCCcccccc
Confidence 0112334455688999999998642 1246899999999999874322 35789999998765321
Q ss_pred CCch-hHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 381 HYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 381 ~~~~-~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
.... ....++.+.+++.+++|+++|+||+|.....
T Consensus 253 ~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 253 IQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp --CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEE
T ss_pred cccccccccHHHHHHHHHHcCCeEEEECCcccCchh
Confidence 1100 0113567889999999999999999997764
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.9e-14 Score=138.35 Aligned_cols=213 Identities=13% Similarity=0.210 Sum_probs=111.0
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCc-----ccccCCCCCCccccchHH----H
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSD-----CYSCSFSKTPIHETYQPR----W 267 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~-----cy~~~~~~~~~~~~y~~~----w 267 (530)
++||+++||+|..... ...++.+.+.++|+|+++||++.. +.... +.... .|..+.++.. .
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~------~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~ 75 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKN------EALEKEYERAHLARR---EPNRKVIHENEHYII 75 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCC------HHHHHHHHHHHHTTC---CCCTHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCc------cCcchhhhhhhhhhc---ccchhhhhHHHHHHH
Confidence 5899999999987543 455666666799999999999952 11000 00000 0000111110 0
Q ss_pred HHHHHHHHHhhh-cCCeEEccCCccccccccccchHHHhhhcC-CCCCCCCCCCcceEEEEcCcEEEEEEcccccC-CCC
Q 009637 268 DYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-DKS 344 (530)
Q Consensus 268 d~~~~~l~~l~~-~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~-~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-~~~ 344 (530)
+.+.++++.+.. .+|+++++||||.... ..+........ .|... ... ....+++++++|+.++..... ...
T Consensus 76 ~~~~~~l~~l~~~~~pv~~v~GNHD~~~~---~~~~~~~~~~~~~~~~~--~l~-~~~~~~~~~~~i~g~~~~~~~~~~~ 149 (260)
T 2yvt_A 76 ETLDKFFREIGELGVKTFVVPGKNDAPLK---IFLRAAYEAETAYPNIR--VLH-EGFAGWRGEFEVIGFGGLLTEHEFE 149 (260)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSCCHH---HHHHHHHHTTTTCTTEE--ECS-SEEEEETTTEEEEEECSEEESSCCB
T ss_pred HHHHHHHHHHHhcCCcEEEEcCCCCchhh---hhHHHHhhhccCCcceE--Eec-CcceEEECCEEEEecCCCcCCCCcC
Confidence 224445555543 6899999999998521 00011111110 01000 000 112378899999999853211 111
Q ss_pred HHHHH----HHH----HHHhcccCCCCCEEEEEeCCCCccCCCCCC--chhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 345 GHQYK----WLE----KDLANVDRSVTPWLVATWHPPWYSSYSSHY--REAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 345 ~~Q~~----WL~----~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
.+|+. |+. +.|++.. . ...|++.|+|++....... .......+.+.+++.+++++++++||+| ...
T Consensus 150 ~~~~~~~~~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~ 225 (260)
T 2yvt_A 150 EDFVLKYPRWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGH 225 (260)
T ss_dssp SSSSCEEEHHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEE
T ss_pred HHHHhhcchhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCc
Confidence 22222 443 3334332 2 2358888988764311100 0000012456678888999999999999 322
Q ss_pred eeecccCccCCCCcEEEEeCCCc
Q 009637 415 SNRVFNYTLDPCGPVHITIGDGG 437 (530)
Q Consensus 415 ~~pv~~~~~~~~G~vyIv~G~gG 437 (530)
. . -++++++..|+.+
T Consensus 226 ~-~-------~~~~~~in~Gs~~ 240 (260)
T 2yvt_A 226 E-L-------VGNTIVVNPGEFE 240 (260)
T ss_dssp E-E-------ETTEEEEECCBGG
T ss_pred E-E-------eCCEEEEeCCCCC
Confidence 1 1 1456777777755
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=132.28 Aligned_cols=188 Identities=11% Similarity=0.050 Sum_probs=106.6
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
++||+++||+|..... ...++.+.+.++|+|+++||+++. +.. ...+..+.+.++.
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~------~~~-----------------~~~~~~~~~~l~~ 61 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 5899999999986322 233444445589999999999942 210 1222333333333
Q ss_pred hhhcCCeEEccCCccccccccccchHHHhhhc----CCCCCCCCCCCcceEEEEcC-cEEEEEEcccc--cCCCCHH---
Q 009637 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF----AFPSEESGSLSSFYYSFNAG-GIHFIMLGAYI--SYDKSGH--- 346 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f----~~P~~~~~~~~~~yYsf~~G-~v~fI~Ldt~~--~~~~~~~--- 346 (530)
+ .+|+++++||||.... ..+...+ ..|... ...+. .+.++ +++|+.++... .+....+
T Consensus 62 ~--~~pv~~v~GNHD~~~~------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 129 (228)
T 1uf3_A 62 A--HLPTAYVPGPQDAPIW------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEAL 129 (228)
T ss_dssp G--CSCEEEECCTTSCSHH------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSC
T ss_pred c--CCcEEEECCCCCchhH------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcc
Confidence 2 6899999999998521 1111111 011100 00011 24455 89999987532 1111222
Q ss_pred -----HHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccC
Q 009637 347 -----QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 421 (530)
Q Consensus 347 -----Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~ 421 (530)
+.+|+++.|++... .+.|++.|+|++...... .. .+.+.+++.++++|++++||+|. ... .
T Consensus 130 ~~~~~~~~~~~~~l~~~~~---~~~il~~H~p~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~GH~H~-~~~-~---- 195 (228)
T 1uf3_A 130 RYPAWVAEYRLKALWELKD---YPKIFLFHTMPYHKGLNE-QG----SHEVAHLIKTHNPLLVLVAGKGQ-KHE-M---- 195 (228)
T ss_dssp EEEHHHHHHHHGGGGGSCS---CCEEEEESSCBCBTTTBT-TS----BHHHHHHHHHHCCSEEEECCSSC-EEE-E----
T ss_pred cchhhhHHHHHHHHHhCCC---CCeEEEEccCcccCCccc-cC----HHHHHHHHHHhCCCEEEEccccc-Ccc-c----
Confidence 23444555555431 248889999987641111 11 13566778889999999999993 221 1
Q ss_pred ccCCCCcEEEEeCCCc
Q 009637 422 TLDPCGPVHITIGDGG 437 (530)
Q Consensus 422 ~~~~~G~vyIv~G~gG 437 (530)
.++++++..|+.+
T Consensus 196 ---~~~~~~in~Gs~~ 208 (228)
T 1uf3_A 196 ---LGASWVVVPGDLS 208 (228)
T ss_dssp ---ETTEEEEECCBGG
T ss_pred ---cCCceEEEecccC
Confidence 2467777777655
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.41 E-value=8.7e-13 Score=135.19 Aligned_cols=188 Identities=14% Similarity=0.121 Sum_probs=100.0
Q ss_pred CeEEEEEccCCCC----CC-------------hHHHHHHHHhCCCCEEEEcCc-cccccccccCCCCCcccccCCCCCCc
Q 009637 198 PKRIAIVGDLGLT----YN-------------TTCTINHMSSNEPDLVLLVGD-VTYANLYLTNGTGSDCYSCSFSKTPI 259 (530)
Q Consensus 198 ~~rf~v~gD~g~~----~~-------------~~~~~~~l~~~~pDfvl~~GD-l~Yad~~~~~G~~~~cy~~~~~~~~~ 259 (530)
.+||++++|+|.+ .. ...+++.+.+.+||+||++|| ++.. +. +.
T Consensus 18 ~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~------~~------------~~ 79 (336)
T 2q8u_A 18 ELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSR------NN------------PS 79 (336)
T ss_dssp EEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCS------SC------------CC
T ss_pred ceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCC------CC------------CC
Confidence 6999999999976 21 123344455679999999999 6631 11 00
Q ss_pred cccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcC----CCCCCCCCCCcceEEEEcCcEEEEEE
Q 009637 260 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNAGGIHFIML 335 (530)
Q Consensus 260 ~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~~~~~~~~yYsf~~G~v~fI~L 335 (530)
......+.+.++.+...+|+++++||||... ...+..+..... +-.+.. ....+.++.+++.|+.+
T Consensus 80 ----~~~~~~~~~~l~~L~~~~pv~~i~GNHD~~~---~~~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~gl 149 (336)
T 2q8u_A 80 ----VVALHDLLDYLKRMMRTAPVVVLPGNHDWKG---LKLFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPF 149 (336)
T ss_dssp ----HHHHHHHHHHHHHHHHHSCEEECCC---------CHHHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEE
T ss_pred ----HHHHHHHHHHHHHHHhcCCEEEECCCCCccc---cccHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEEC
Confidence 1123345566666643489999999999863 122222322211 111100 00011223467889888
Q ss_pred cccccC-------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHH-HHHHHHHHHHcCCcEEEEc
Q 009637 336 GAYISY-------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM-RVEMEALLYSYGVDIVFNG 407 (530)
Q Consensus 336 dt~~~~-------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~-r~~l~~ll~k~~VdlvlsG 407 (530)
+..... ....+|++|+.+.|.+.-+....+.|++.|.|.+...... .+. .+ ...+...+.+.++|++++|
T Consensus 150 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~-~~~~~~v~~~l~~~~~d~v~~G 227 (336)
T 2q8u_A 150 PYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIE-QGREIIINRALIPSVVDYAALG 227 (336)
T ss_dssp CCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEE
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-Ccc-chhhcccCHHHccccCCEEEEc
Confidence 643211 1135688999888865310123578999999987532110 000 00 0001112345689999999
Q ss_pred cccCceee
Q 009637 408 HVHAYERS 415 (530)
Q Consensus 408 H~H~yeR~ 415 (530)
|+|..+..
T Consensus 228 H~H~~~~~ 235 (336)
T 2q8u_A 228 HIHSFREI 235 (336)
T ss_dssp SCSSCEEE
T ss_pred cccCceEe
Confidence 99998765
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-11 Score=120.27 Aligned_cols=186 Identities=9% Similarity=0.018 Sum_probs=100.5
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHH---hC--CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMS---SN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~---~~--~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
+||+++||+|.... ....++.+. +. ++|+|+++||++.. |.. . ....+
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~------g~~------------------~--~~~~~ 55 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FPY------------------P--KEVIE 55 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SSC------------------H--HHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCC------CCC------------------H--HHHHH
Confidence 58999999997532 234556665 65 79999999999942 210 0 12334
Q ss_pred HHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcc--cccCCCCHHHHHH
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKW 350 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~W 350 (530)
.++.+....|+++++||||..... +...+. .. .. ...++..... ... +.......+|++|
T Consensus 56 ~l~~l~~~~~~~~v~GNhD~~~~~-------~~~~~~-~~------~~-~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 117 (252)
T 1nnw_A 56 VIKDLTKKENVKIIRGKYDQIIAM-------SDPHAT-DP------GY-IDKLELPGHV---KKALKFTWEKLGHEGREY 117 (252)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHHH-------SCTTCS-SS------GG-GGGSSCCHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHhhcCeeEEecchHHHhhc-------cccccC-Cc------cc-ccchhhhHHH---HHHHHHHHHHCCHHHHHH
Confidence 445544346899999999974210 000010 00 00 0000000000 000 0000124578899
Q ss_pred HHHHHhcccCCCCCEEEEEeCCCCccCCC-CCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCc
Q 009637 351 LEKDLANVDRSVTPWLVATWHPPWYSSYS-SHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGP 428 (530)
Q Consensus 351 L~~~L~~~~r~~~pwvIv~~H~P~y~s~~-~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~ 428 (530)
|++.............|++.|.+++.... ..... ...+.+..++.++ +++++++||+|...... .+|+
T Consensus 118 L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~ 187 (252)
T 1nnw_A 118 LRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYG 187 (252)
T ss_dssp HHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTE
T ss_pred HHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCe
Confidence 87643322111012356677766532211 11111 1124577788888 99999999999865542 2578
Q ss_pred EEEEeCCCcc
Q 009637 429 VHITIGDGGN 438 (530)
Q Consensus 429 vyIv~G~gG~ 438 (530)
++|..|+.|.
T Consensus 188 ~~in~Gs~~~ 197 (252)
T 1nnw_A 188 RVVCPGSVGF 197 (252)
T ss_dssp EEEEECCSSS
T ss_pred EEEECCCccC
Confidence 8999998775
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.9e-11 Score=120.27 Aligned_cols=199 Identities=15% Similarity=0.055 Sum_probs=107.7
Q ss_pred CeEEEEEccCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 198 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
.+||+++||+|..... + .-.++|+||++||++. .|. ......+.+.++.+
T Consensus 59 ~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~------~g~------------------~~e~~~~~~~L~~l 108 (296)
T 3rl5_A 59 HTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTE------LGL------------------PSEVKKFNDWLGNL 108 (296)
T ss_dssp EEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSS------SCC------------------HHHHHHHHHHHHTS
T ss_pred CeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccC------CCC------------------HHHHHHHHHHHHhC
Confidence 5899999999986432 1 2257999999999994 232 12334445555554
Q ss_pred hhcCCeEEccCCccccccccccchHHHhh----hc----CCCC----CCCCCCCcceE----EEEcCcEEEEEEcccccC
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSS----RF----AFPS----EESGSLSSFYY----SFNAGGIHFIMLGAYISY 341 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~----~f----~~P~----~~~~~~~~~yY----sf~~G~v~fI~Ldt~~~~ 341 (530)
. ..++++++||||...+.. .+..... ++ ..+. +...-..+..| +..+++++|+...-...+
T Consensus 109 ~-~~~v~~V~GNHD~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~ 185 (296)
T 3rl5_A 109 P-YEYKIVIAGNHELTFDKE--FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWF 185 (296)
T ss_dssp C-CSEEEECCCTTCGGGCHH--HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC-
T ss_pred C-CCeEEEEcCCcccccchh--hhhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCC
Confidence 2 245899999999964311 0110000 00 0000 00000011121 355678999885432211
Q ss_pred ---CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC-chhHHHHHHHHHHH-HHcCCcEEEEccccCceeee
Q 009637 342 ---DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-REAECMRVEMEALL-YSYGVDIVFNGHVHAYERSN 416 (530)
Q Consensus 342 ---~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~-~~~~~~r~~l~~ll-~k~~VdlvlsGH~H~yeR~~ 416 (530)
....++.+++.+.+.+.. .+ ..|++.|.|++....... .....-.+.+.+.+ .+++++++++||+|......
T Consensus 186 ~~~~f~~~~~~~~~~~~~~ip-~~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~ 262 (296)
T 3rl5_A 186 NGWGFNLPRGQSLLDKWNLIP-EG--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM 262 (296)
T ss_dssp -CCTTBCCTTHHHHHHHTTSC-TT--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE
T ss_pred CCcCCCcchHHHHHHHHhhCC-CC--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceE
Confidence 112222234444444442 22 358899999987532110 00000113455555 68899999999999754322
Q ss_pred ecccCccCCCCcEEEEeCCCccc
Q 009637 417 RVFNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 417 pv~~~~~~~~G~vyIv~G~gG~~ 439 (530)
. .+++++|..|+-|..
T Consensus 263 ~-------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 263 T-------DGYTTYINASTCTVS 278 (296)
T ss_dssp E-------CSSCEEEECBCSCTT
T ss_pred E-------ECCEEEEECCcCCcC
Confidence 1 267899988887763
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-10 Score=120.58 Aligned_cols=174 Identities=17% Similarity=0.135 Sum_probs=94.9
Q ss_pred CeEEEEEccCCCCCC--------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 198 PKRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--------------~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
++||++++|+|.+.. ...+++.+.+.+||+||++||++.. +. +.
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~------~~------------p~---- 77 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFND------LR------------PP---- 77 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSS------SS------------CC----
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----
Confidence 699999999998742 1234455556799999999999842 11 00
Q ss_pred hHHHHHHHHHHHHhhh-cCCeEEccCCcccccccccc-chHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC
Q 009637 264 QPRWDYWGRFMQNLVS-KVPIMVVEGNHEIEAQAGNQ-TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY 341 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~~-~vP~~~v~GNHD~~~~~~~~-~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~ 341 (530)
...+..+.+.++.+.. .+|+++++||||........ ....+......-. ...++..+.+++.++.++.....
T Consensus 78 ~~~~~~~~~~l~~L~~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~ 151 (386)
T 3av0_A 78 VKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS 151 (386)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH
Confidence 1233455666777654 58999999999986422110 0001111010000 01122222356888888864322
Q ss_pred CCCHHHHHH---HHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 342 DKSGHQYKW---LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 342 ~~~~~Q~~W---L~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
...+..+| +...+.. ..+.|++.|.|........+.. .+.. +. ++|++++||+|...+
T Consensus 152 -~~~~~~~~l~~l~~~~~~-----~~~~Ill~H~~~~~~~~~~~~~------~~~~-l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 152 -KREEMLDKLKNFESEAKN-----YKKKILMLHQGINPYIPLDYEL------EHFD-LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp -THHHHHHHHHHHHHHHHT-----CSSEEEEECCCCTTTSSSSCSS------CGGG-SC--CCSEEEECSCCSCEE
T ss_pred -HHHHHHHHHHHhhhhccc-----CCCEEEEECcCccccCCCCccc------CHHH-hh--hCCeEEccCCCCCcc
Confidence 12222333 3333221 2347999999875321111100 0111 11 399999999998743
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.14 E-value=6.6e-10 Score=106.54 Aligned_cols=143 Identities=16% Similarity=0.324 Sum_probs=85.2
Q ss_pred CeEEEEEccCCCCCC---hHHHHHHH-HhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN---TTCTINHM-SSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---~~~~~~~l-~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~ 273 (530)
.+||+++||+|.... ....+.++ .+.++|+|+++||++.. ...+.
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~-------------------------------~~l~~ 73 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEM 73 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHH
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH-------------------------------HHHHH
Confidence 489999999997532 22334444 45689999999999831 12233
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHH
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 353 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~ 353 (530)
++.+ ..|++.++||||....... ..+.. .+| ....+
T Consensus 74 l~~~--~~~v~~V~GNHD~~~~~~~---~~~~~--~lp---------~~~~~---------------------------- 109 (215)
T 2a22_A 74 LKNI--TKNVYIVSGDLDSAIFNPD---PESNG--VFP---------EYVVV---------------------------- 109 (215)
T ss_dssp HHHH--CSCEEECCCTTCCSCCBCC---GGGTB--CCC---------SEEEE----------------------------
T ss_pred HHHc--CCCEEEecCCCcCcccccC---hhhHh--hCC---------ceEEE----------------------------
Confidence 4443 4689999999998532100 00000 000 00000
Q ss_pred HHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEe
Q 009637 354 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433 (530)
Q Consensus 354 ~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~ 433 (530)
+. ....|++.|.+.+.... . .+.+..++.+.++|++++||+|...... .+|+.+|..
T Consensus 110 ---~~----~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inp 166 (215)
T 2a22_A 110 ---QI----GEFKIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNP 166 (215)
T ss_dssp ---EE----TTEEEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEEC
T ss_pred ---ec----CCeEEEEEcCCccCCCC----C----HHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEEC
Confidence 00 12467888854443211 1 2355667777899999999999865431 257888888
Q ss_pred CCCcc
Q 009637 434 GDGGN 438 (530)
Q Consensus 434 G~gG~ 438 (530)
|+.+.
T Consensus 167 GS~~~ 171 (215)
T 2a22_A 167 GTATG 171 (215)
T ss_dssp CCSSC
T ss_pred Ccccc
Confidence 87654
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2.4e-09 Score=100.68 Aligned_cols=134 Identities=15% Similarity=0.278 Sum_probs=83.6
Q ss_pred CeEEEEEccCCCCCC---hHHHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN---TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---~~~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~ 273 (530)
.+||+++||+|.... ....+.++. +.++|+|+++||++.. ...+.
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~-------------------------------~~~~~ 58 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDY 58 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHH
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH-------------------------------HHHHH
Confidence 379999999997532 223333333 4579999999999831 11233
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHH
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 353 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~ 353 (530)
++.+ ..|++.++||||... .+|. ...++.
T Consensus 59 l~~~--~~~~~~v~GNhD~~~--------------~lp~---------~~~~~~-------------------------- 87 (192)
T 1z2w_A 59 LKTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTV-------------------------- 87 (192)
T ss_dssp HHHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEE--------------------------
T ss_pred HHhc--CCCEEEEcCCcCccc--------------cCCc---------ceEEEE--------------------------
Confidence 4433 358999999999742 1221 111111
Q ss_pred HHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEe
Q 009637 354 DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITI 433 (530)
Q Consensus 354 ~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~ 433 (530)
..+.|++.|.+.+.... . .+.+..++.+.++|++++||+|...... .+|+.+|..
T Consensus 88 ---------~~~~i~l~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inp 142 (192)
T 1z2w_A 88 ---------GQFKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINP 142 (192)
T ss_dssp ---------TTEEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEEC
T ss_pred ---------CCEEEEEECCCcCCCCC----C----HHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEEC
Confidence 12467778854443211 1 2345667777899999999999865432 267888888
Q ss_pred CCCcc
Q 009637 434 GDGGN 438 (530)
Q Consensus 434 G~gG~ 438 (530)
|+.+.
T Consensus 143 GS~~~ 147 (192)
T 1z2w_A 143 GSATG 147 (192)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 87654
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.11 E-value=3.1e-10 Score=118.25 Aligned_cols=190 Identities=16% Similarity=0.188 Sum_probs=102.7
Q ss_pred eEEEEEccCCCCCC----h-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccc
Q 009637 199 KRIAIVGDLGLTYN----T-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 261 (530)
Q Consensus 199 ~rf~v~gD~g~~~~----~-------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~ 261 (530)
+||++++|+|.+.. . ...++.+.+.+||+||++||+++... ...
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~---~~~---------------- 61 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRN---NPS---------------- 61 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSS---SCC----------------
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCC---CCC----------------
Confidence 58999999998753 1 22333344579999999999983210 000
Q ss_pred cchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEE--cC-cEEEEEEccc
Q 009637 262 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFN--AG-GIHFIMLGAY 338 (530)
Q Consensus 262 ~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~--~G-~v~fI~Ldt~ 338 (530)
...+..+.+.++.+...+|+++++||||... ...+..+.. .++.+........-+.+. .| .+.|+.+.-.
T Consensus 62 --~~~~~~~~~~l~~l~~~~~v~~i~GNHD~~~---~~~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~ 134 (379)
T 3tho_B 62 --VVALHDLLDYLKRMMRTAPVVVLPGNQDWKG---LKLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYP 134 (379)
T ss_dssp --HHHHHHHHHHHHHHHHHSCEEECCCTTSCTT---HHHHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCC
T ss_pred --HHHHHHHHHHHHHHHhCCCEEEEcCCCcccc---Ccccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCC
Confidence 1234556667777754499999999999632 111122221 112110000001112233 34 4777777532
Q ss_pred ccCC----CCHHHHHHHHHHHhcc---cCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccC
Q 009637 339 ISYD----KSGHQYKWLEKDLANV---DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 339 ~~~~----~~~~Q~~WL~~~L~~~---~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.... ...++.+|+.+.|++. ......+.|+++|.++.........+. .+...+...+...++|+++.||+|.
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se~-~~~~~v~~~~~~~~~dyvalGH~H~ 213 (379)
T 3tho_B 135 DESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQ-GREIIINRALIPSVVDYAALGHIHS 213 (379)
T ss_dssp CCC----CHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSS
T ss_pred CHHHHhhhhccchHHHHHHHHHHHHHHhcCCCCCeEEEEeccccCCccCCCCcc-ccccccCHHHcCcCCCEEEcccccC
Confidence 2111 1356789999988721 001335689999998754321000000 0001122222346899999999999
Q ss_pred ceee
Q 009637 412 YERS 415 (530)
Q Consensus 412 yeR~ 415 (530)
.+..
T Consensus 214 ~q~~ 217 (379)
T 3tho_B 214 FREI 217 (379)
T ss_dssp CEEE
T ss_pred CeEe
Confidence 8654
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=3.9e-10 Score=112.04 Aligned_cols=185 Identities=18% Similarity=0.148 Sum_probs=101.8
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
+.||+++||+|..... .++++.+.+.++|.|+++||++.. |.. .....+.++.
T Consensus 11 ~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~------g~~--------------------~~~~~~~l~~ 64 (270)
T 3qfm_A 11 MTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMP------GTG--------------------RRRILDLLDQ 64 (270)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSS------SSC--------------------SHHHHHHHHT
T ss_pred ccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC--------------------HHHHHHHHHc
Confidence 6899999999975322 345666667799999999999942 210 0223333333
Q ss_pred hhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHh
Q 009637 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLA 356 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~ 356 (530)
+ .|++++.||||.... ......+.++.. ...+.+ . ...+.......++++||++...
T Consensus 65 ~---~~~~~v~GNhD~~~~------~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~ 121 (270)
T 3qfm_A 65 L---PITARVLGNWEDSLW------HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPL 121 (270)
T ss_dssp S---CEEEECCCHHHHHHH------HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCS
T ss_pred c---CCEEEEcCChHHHHH------HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCC
Confidence 3 478999999997421 000000000000 000000 0 0001111346788999986544
Q ss_pred cccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCC
Q 009637 357 NVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 357 ~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
..........|++.|..+..... .+-....-.+.+..++.+.++|++|+||+|...... ..+|.++|..|+.
T Consensus 122 ~~~~~~~g~~i~lvHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~-------~~~~~~~iNpGSv 193 (270)
T 3qfm_A 122 QIHRQFGDLTVGISHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY-------GTGGQLIVNPGSI 193 (270)
T ss_dssp EEEEEETTEEEEEESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE-------CTTSCEEEEECCS
T ss_pred ceEEEECCcEEEEEECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee-------ccCCEEEEECCCc
Confidence 32111112356677755432211 100000113456677778899999999999644321 1368999999999
Q ss_pred ccc
Q 009637 437 GNL 439 (530)
Q Consensus 437 G~~ 439 (530)
|..
T Consensus 194 g~p 196 (270)
T 3qfm_A 194 GQP 196 (270)
T ss_dssp SSC
T ss_pred cCC
Confidence 874
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-09 Score=98.18 Aligned_cols=58 Identities=10% Similarity=0.027 Sum_probs=41.6
Q ss_pred EEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 365 WLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 365 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
..|++.|.|++.... . .+.+.+++.++++|++++||+|...... .+|+.+|..|+.|.
T Consensus 78 ~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 78 TKIIQTHGHLFDINF----N----FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQ 135 (176)
T ss_dssp EEEEEECSGGGTTTT----C----SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSS
T ss_pred eEEEEECCCccCCCC----C----HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCc
Confidence 468888888765321 1 1346677788999999999999865432 26788898888764
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.03 E-value=8.5e-10 Score=103.90 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=42.3
Q ss_pred EEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCC-CcEEEEeCC
Q 009637 365 WLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPC-GPVHITIGD 435 (530)
Q Consensus 365 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~-G~vyIv~G~ 435 (530)
+.|++.|.|++......+. ...+.+.+++.++++|++++||+|...... +++. .+ |..|+.+|.
T Consensus 107 ~~i~~~H~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g~--~~~g~~~~nvg~ 171 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERYP---DRQEMVREIYFKENCDLLIHGHVHWNREGI--KCAC--KDYRIECINANV 171 (195)
T ss_dssp EEEEEESSCSSCSSCCSCH---HHHHHHHHHHHHTTCSEEEECCCCCCSCC----CCT--TSSSCCEEECBG
T ss_pred cEEEEEccCCcCCCccccc---chHHHHHHHHHHcCCcEEEECCcCCCCccc--cccc--ccCCcceEEEeE
Confidence 4788899988765433322 235788889999999999999999865431 1111 12 566676665
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.00 E-value=2e-09 Score=101.34 Aligned_cols=140 Identities=17% Similarity=0.164 Sum_probs=84.7
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+||+++||+|.... ..+.++.+.+.++|+|+++||++.. ...+.++.+
T Consensus 26 m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~-------------------------------~~~~~l~~l 74 (190)
T 1s3l_A 26 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL-------------------------------FVIKEFENL 74 (190)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST-------------------------------HHHHHGGGC
T ss_pred eEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH-------------------------------HHHHHHHhc
Confidence 89999999995421 2344555666799999999999821 122233332
Q ss_pred hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhc
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (530)
..|+++++||||.... . +...+ .|. +. . + +. .. ...
T Consensus 75 --~~~~~~V~GNhD~~~~----~---~~~~~-~~~---~~-~--~---------l~--~~-----------------~~~ 110 (190)
T 1s3l_A 75 --NANIIATYGNNDGERC----K---LKEWL-KDI---NE-E--N---------II--DD-----------------FIS 110 (190)
T ss_dssp --SSEEEEECCTTCCCHH----H---HHHHH-HHH---CT-T--C---------EE--ES-----------------EEE
T ss_pred --CCCEEEEeCCCcchHH----H---HHHHh-ccc---Ch-h--h---------hc--cc-----------------ceE
Confidence 5799999999997521 1 11111 000 00 0 0 00 00 000
Q ss_pred ccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCcEEEEeCCC
Q 009637 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 358 ~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~g 436 (530)
.. ...+.|++.|.|.+. +.+.+.+. ++|++++||+|..+... .+++.+|..|+.
T Consensus 111 ~~--~~~~~ill~Hg~~~~---------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~ 165 (190)
T 1s3l_A 111 VE--IDDLKFFITHGHHQS---------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGEC 165 (190)
T ss_dssp EE--ETTEEEEEEESCCHH---------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCS
T ss_pred Ee--eCCcEEEEECCChHH---------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcc
Confidence 11 113578888987653 23445555 99999999999876542 267889999987
Q ss_pred cc
Q 009637 437 GN 438 (530)
Q Consensus 437 G~ 438 (530)
|.
T Consensus 166 ~~ 167 (190)
T 1s3l_A 166 CG 167 (190)
T ss_dssp SC
T ss_pred cc
Confidence 75
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=106.70 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=95.0
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
.+|++++||+|..... ...++.+. ++|.++++||++.. |.. . ....+.+..
T Consensus 3 ~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~------g~~------------------~--~~~~~~l~~ 54 (246)
T 3rqz_A 3 AMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGY------GPR------------------P--RECVELVRV 54 (246)
T ss_dssp CCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCC------CCC------------------H--HHHHHHHHh
Confidence 4899999999964321 22333333 89999999999941 210 0 122333333
Q ss_pred hhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHh
Q 009637 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLA 356 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~ 356 (530)
+ .+++.+.||||..... .+.... +..... ..+ .+.......++++||++...
T Consensus 55 ~---~~~~~v~GNhD~~~~~----------~~~~~~------------~~~~~~--~~~-~~~~~~l~~~~~~~L~~lp~ 106 (246)
T 3rqz_A 55 L---APNISVIGNHDWACIG----------RLSLDE------------FNPVAR--FAS-YWTTMQLQAEHLQYLESLPN 106 (246)
T ss_dssp H---CSSEECCCHHHHHHTC----------CCCCC--------------CGGGG--CHH-HHHHHHCCHHHHHHHHHCCS
T ss_pred c---CCCEEEeCchHHHHhc----------cCCccc------------cCHHHH--HHH-HHHHHHcCHHHHHHHHhCCc
Confidence 3 2369999999974211 000000 000000 000 00001235788999987544
Q ss_pred cccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeee----------cc--cCcc-
Q 009637 357 NVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR----------VF--NYTL- 423 (530)
Q Consensus 357 ~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~p----------v~--~~~~- 423 (530)
.... . .|++.|.++...... +... ...+.++|.++++|++|+||+|....... .. ....
T Consensus 107 ~~~~-~---~i~~~Hg~p~~~~~~-~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~ 178 (246)
T 3rqz_A 107 RMID-G---DWTVVHGSPRHPIWE-YIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLD 178 (246)
T ss_dssp EEEE-T---TEEEESSCSSSTTTC-CCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEE
T ss_pred EEEE-C---CEEEEECCcCCcccc-ccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceee
Confidence 3321 1 356667665543211 1111 24567788999999999999997433220 00 0000
Q ss_pred CCCCcEEEEeCCCccc
Q 009637 424 DPCGPVHITIGDGGNL 439 (530)
Q Consensus 424 ~~~G~vyIv~G~gG~~ 439 (530)
-+.|...|..|+-|..
T Consensus 179 l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 179 VSSGRYIINPGAVGQP 194 (246)
T ss_dssp CSSSCEEEEECCSSCC
T ss_pred cCCCeEEEECCccCCC
Confidence 0246888889998874
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.91 E-value=4.4e-08 Score=100.02 Aligned_cols=73 Identities=21% Similarity=0.370 Sum_probs=51.3
Q ss_pred eEEEEEccCCCCCCh--------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 199 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~--------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
+||++++|+|.+... ...++.+.+.+||+||++||+++.. . +. .
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~------~------------~~----~ 58 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSS------R------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSS------S------------CC----H
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCC------C------------CC----H
Confidence 589999999987531 2234445568999999999998521 1 00 1
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEccCCcccc
Q 009637 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIE 293 (530)
Q Consensus 265 ~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~ 293 (530)
..+..+.+.++.+. ..+|+++++||||..
T Consensus 59 ~~~~~~~~~l~~l~~~~~~v~~v~GNHD~~ 88 (333)
T 1ii7_A 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRT 88 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCC
T ss_pred HHHHHHHHHHHHHHHCCCcEEEeCCcCCCc
Confidence 23455566677764 368999999999985
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-08 Score=93.84 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=43.0
Q ss_pred CeEEEEEccCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
-+||+++||+|...+ ..+.++++. .++|+|+++||++.. ...+.+
T Consensus 22 mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~-------------------------------~~~~~l 69 (178)
T 2kkn_A 22 VKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL-------------------------------DTVILL 69 (178)
T ss_dssp CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH-------------------------------HHHHHH
T ss_pred ceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH-------------------------------HHHHHH
Confidence 379999999995222 234455544 689999999999831 122334
Q ss_pred HHhhhcCCeEEccCCcccc
Q 009637 275 QNLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~ 293 (530)
+.+ ..|++.++||||..
T Consensus 70 ~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 70 EKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp HHH--TSSEEECCCSSSCG
T ss_pred Hhc--CCCEEEEECCCCcH
Confidence 443 36999999999974
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=98.82 E-value=1.7e-07 Score=98.13 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCeEEEEEccCCCCCC---------h----HHHHHHHHhCCCCEEEEcCcccc
Q 009637 197 YPKRIAIVGDLGLTYN---------T----TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~---------~----~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
..+||++++|+|.+.. . ..+++.+.+.+||+||++||++.
T Consensus 12 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 64 (417)
T 4fbw_A 12 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 64 (417)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 4799999999998742 1 23455566789999999999985
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-07 Score=99.26 Aligned_cols=40 Identities=25% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCeEEEEEccCCCCCCh-------------HHHHHHHHhCCCCEEEEcCcccc
Q 009637 197 YPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
.++||++++|+|.+... ..+++.+.+.+||+||++||++.
T Consensus 31 ~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd 83 (431)
T 3t1i_A 31 NTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFH 83 (431)
T ss_dssp GEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBS
T ss_pred CCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 47999999999986421 33455556789999999999985
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=8.8e-07 Score=93.71 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=31.6
Q ss_pred CCeEEEEEccCCCCCCh-------------HHHHHHHHhCCCCEEEEcCcccc
Q 009637 197 YPKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
.++||++++|+|.+... ..+++.+.+.+||+||++||++.
T Consensus 75 ~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd 127 (472)
T 4fbk_A 75 NTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFH 127 (472)
T ss_dssp TCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBS
T ss_pred CCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 37999999999986421 33455666789999999999985
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.56 E-value=4.1e-07 Score=99.23 Aligned_cols=174 Identities=20% Similarity=0.194 Sum_probs=94.8
Q ss_pred CCeEEEEEccCCCCC---------------C---hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCCCCC
Q 009637 197 YPKRIAIVGDLGLTY---------------N---TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 257 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~---------------~---~~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~ 257 (530)
..++|++++|+|... . ....++++.+.+|+ +++.+||++....+
T Consensus 28 ~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~----------------- 90 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY----------------- 90 (552)
T ss_dssp CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-----------------
T ss_pred eeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHH-----------------
Confidence 369999999999641 1 13346666666788 88999999842110
Q ss_pred CccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCC-----CCC-----CCcceEEEEc
Q 009637 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-----SGS-----LSSFYYSFNA 327 (530)
Q Consensus 258 ~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-----~~~-----~~~~yYsf~~ 327 (530)
.. ........+.|+.+ -+-++++||||+.. +...+..+.+...+|--. .+. ....|..++.
T Consensus 91 --~~--~~~~~~~~~~ln~l---g~d~~~lGNHEfd~--g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~ 161 (552)
T 2z1a_A 91 --FN--QYRGLADRYFMHRL---RYRAMALGNHEFDL--GPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVV 161 (552)
T ss_dssp --HH--HHTTHHHHHHHHHT---TCCEEECCGGGGTT--CHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEE
T ss_pred --HH--HhCCcHHHHHHHhc---CCCccccccccccC--CHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEE
Confidence 00 00112233444443 23477899999863 222333333333322111 000 1234667788
Q ss_pred Cc--EEEEEEccccc-----------CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHH
Q 009637 328 GG--IHFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 394 (530)
Q Consensus 328 G~--v~fI~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ 394 (530)
++ +.|+.+.+... +....++.+.+.+.|++ .+...+|++.|.|.... ..
T Consensus 162 ~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~ 223 (552)
T 2z1a_A 162 GGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LK 223 (552)
T ss_dssp TTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HH
T ss_pred CCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HH
Confidence 87 55566654210 01112344444445553 23445999999885320 12
Q ss_pred HHHH-cCCcEEEEccccCcee
Q 009637 395 LLYS-YGVDIVFNGHVHAYER 414 (530)
Q Consensus 395 ll~k-~~VdlvlsGH~H~yeR 414 (530)
+..+ .+||++|+||.|....
T Consensus 224 la~~~~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 224 LARRLVGVQVIVGGHSHTLLG 244 (552)
T ss_dssp HHTTCSSCCEEEECSSCCCBS
T ss_pred HHHhCCCccEEEeCCcCcccc
Confidence 2333 5899999999998654
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.5e-07 Score=87.02 Aligned_cols=75 Identities=16% Similarity=0.273 Sum_probs=47.3
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+||+++||+|.... ..+.++.+.+.++|+|+++||+++. |... ...+.|. -....+.++.+
T Consensus 26 mki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~------g~~~----------~~~~~~~--~~~~~~~l~~~ 87 (208)
T 1su1_A 26 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNH------GPRN----------ALPEGYA--PAKVVERLNEV 87 (208)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCC------CTTS----------CCCTTBC--HHHHHHHHHTT
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCcccc------Cccc----------ccccccC--HHHHHHHHHhc
Confidence 79999999997532 2344555555689999999999952 1100 0111111 13344455544
Q ss_pred hhcCCeEEccCCcccc
Q 009637 278 VSKVPIMVVEGNHEIE 293 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~ 293 (530)
..|++.++||||..
T Consensus 88 --~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 88 --AHKVIAVRGNCDSE 101 (208)
T ss_dssp --GGGEEECCCTTCCH
T ss_pred --CCceEEEECCCchH
Confidence 35899999999974
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-07 Score=98.81 Aligned_cols=185 Identities=17% Similarity=0.137 Sum_probs=94.3
Q ss_pred CCeEEEEEccCCCCCC-----------hHHHHHHHHhC----CC-CEEEEcCccccccccccCCCCCcccccCCCCCCcc
Q 009637 197 YPKRIAIVGDLGLTYN-----------TTCTINHMSSN----EP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~-----------~~~~~~~l~~~----~p-Dfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
..++|++++|+|.... ....++++.+. ++ +++|.+||++. |.. ..
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~-------g~~------------~~ 67 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINT-------GVP------------ES 67 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSS-------SCH------------HH
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCC-------Ccc------------hh
Confidence 3689999999997532 12345555432 46 79999999973 210 00
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCC-------CC-CCCcceEEEEcCc--E
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SG-SLSSFYYSFNAGG--I 330 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsf~~G~--v 330 (530)
+. .......+.|+.+ . +-++++||||+... ...+........+|--. .+ .....|..++.++ +
T Consensus 68 ~~--~~~~~~~~~ln~l--g-~d~~~~GNHEfd~g--~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kI 140 (516)
T 1hp1_A 68 DL--QDAEPDFRGMNLV--G-YDAMAIGNHEFDNP--LTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (516)
T ss_dssp HT--TTTHHHHHHHHHH--T-CCEEECCGGGGSSC--HHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred hh--cCCcHHHHHHhcc--C-CCEEeeccccccCC--HHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEE
Confidence 00 0112334455554 2 34678999999532 12233333332333111 00 0123455677887 4
Q ss_pred EEEEEccccc--CC-----------CCHHHH-HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCC--chhHHHHHHHHH
Q 009637 331 HFIMLGAYIS--YD-----------KSGHQY-KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY--REAECMRVEMEA 394 (530)
Q Consensus 331 ~fI~Ldt~~~--~~-----------~~~~Q~-~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~--~~~~~~r~~l~~ 394 (530)
.||.+.+... +. ...+.. +|++ .|++. .+...+|++.|.|......... ... ..+..
T Consensus 141 giiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~-~l~~~--~~~d~iI~l~H~g~~~~~~~~~~~~~~----~~la~ 213 (516)
T 1hp1_A 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQ-ELQQT--EKPDIIIAATHMGHYDNGEHGSNAPGD----VEMAR 213 (516)
T ss_dssp EEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHH-HHHHH--TCCSEEEEEEESCCCGGGCCTTSCCCH----HHHHH
T ss_pred EEEEecccCcccccCcCccCCcEEeCHHHHHHHHHH-HHHhc--CCCCEEEEEecCCccCCCcccccCchH----HHHHH
Confidence 5566654321 11 011222 3333 34421 1356799999999754321100 111 12333
Q ss_pred HHHHcCCcEEEEccccCcee
Q 009637 395 LLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 395 ll~k~~VdlvlsGH~H~yeR 414 (530)
.+...+||++|+||.|...-
T Consensus 214 ~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 214 ALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp HSCTTSSSEEECCSSCCBCC
T ss_pred hCCCCceeEEECCCCCcccc
Confidence 33344599999999997543
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.43 E-value=3.5e-06 Score=91.35 Aligned_cols=204 Identities=18% Similarity=0.178 Sum_probs=102.7
Q ss_pred CeEEEEEccCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCCCCCCc
Q 009637 198 PKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~-----------------~~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~ 259 (530)
.++|++++|+|.... ....++++.+..++ ++|.+||++.. .. .
T Consensus 19 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g-------s~------------~ 79 (527)
T 3qfk_A 19 NIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQG-------SP------------F 79 (527)
T ss_dssp EEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSS-------SH------------H
T ss_pred cEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCC-------cH------------H
Confidence 699999999996431 12456666666776 77889999842 20 0
Q ss_pred cccchH----HHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCC-----CC--CCcceEEEEcC
Q 009637 260 HETYQP----RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----GS--LSSFYYSFNAG 328 (530)
Q Consensus 260 ~~~y~~----~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~-----~~--~~~~yYsf~~G 328 (530)
. .|.. .+....+.|+.+ .. -++++||||+.. +...+..+.....+|--.. +. ....|.-++.+
T Consensus 80 ~-~~~~~~~~~~~~~~~~ln~l--g~-D~~t~GNHefd~--G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~ 153 (527)
T 3qfk_A 80 C-NYLIAHSGSSQPLVDFYNRM--AF-DFGTLGNHEFNY--GLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVG 153 (527)
T ss_dssp H-HHHHHTTCSSHHHHHHHHHT--CC-CEECCCGGGGTT--CHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEET
T ss_pred H-HHHhhcccCcchHHHHHHhc--CC-cEEecccccccc--CHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEEC
Confidence 0 0000 012333444444 33 356799999752 2233444444444332111 00 01236667888
Q ss_pred cEE--EEEEcccc--cCCC--------CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCC-CC-----CchhHHHHH
Q 009637 329 GIH--FIMLGAYI--SYDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS-SH-----YREAECMRV 390 (530)
Q Consensus 329 ~v~--fI~Ldt~~--~~~~--------~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~-~~-----~~~~~~~r~ 390 (530)
+++ ||.+.+.. .+.. -....+.+++.+++.. .+...+|+++|.+.-.... .. ..+.. . .
T Consensus 154 G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~-~ 230 (527)
T 3qfk_A 154 DQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-G-Y 230 (527)
T ss_dssp TEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-H-H
T ss_pred CEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-H-H
Confidence 754 55554421 1111 1122344444444433 3456799999987543210 00 01110 0 1
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcc
Q 009637 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 438 (530)
Q Consensus 391 ~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~ 438 (530)
++..-+ ..+||++|+||.|...-. .+ +++..+..|.-|.
T Consensus 231 ~la~~~-~~giDlIlgGHtH~~~~~-~v-------~~~~ivqag~~g~ 269 (527)
T 3qfk_A 231 AMLEAF-SKDIDIFITGHQHRQIAE-RF-------KQTAVIQPGTRGT 269 (527)
T ss_dssp HHHHHH-GGGCSEEECCSSCCEEEE-EE-------TTEEEEEECSTTS
T ss_pred HHHHhc-CCCCcEEEECCCCcccce-EE-------CCEEEeccChhhC
Confidence 121111 248999999999986531 11 3455555555554
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.33 E-value=6.9e-06 Score=89.67 Aligned_cols=153 Identities=19% Similarity=0.161 Sum_probs=80.1
Q ss_pred HHHHHHhC--C--CC-EEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCc
Q 009637 216 TINHMSSN--E--PD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNH 290 (530)
Q Consensus 216 ~~~~l~~~--~--pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNH 290 (530)
.++++.+. + || ++|.+||++.. .. ... + .......+.|+.+ ..+++ + |||
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~g-------s~------------~~~-~-~~g~~~~~~ln~l--g~d~~-~-GNH 164 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTN-------SG------------LSL-L-TRGEAVVRWQNLV--GVDHM-V-SHW 164 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSS-------SH------------HHH-H-HTTHHHHHHHHHH--TCCEE-C-CSG
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCc-------ch------------hhh-h-hCCHHHHHHHHhh--CCcEE-e-cch
Confidence 34555443 3 88 89999999942 20 000 0 0122334555555 46665 6 999
Q ss_pred cccccccccchHHHhhhcCCCCCCC-------C-CCCcceEEEEcCc--EEEEEEcccc-------------cCCCCHHH
Q 009637 291 EIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGG--IHFIMLGAYI-------------SYDKSGHQ 347 (530)
Q Consensus 291 D~~~~~~~~~f~~y~~~f~~P~~~~-------~-~~~~~yYsf~~G~--v~fI~Ldt~~-------------~~~~~~~Q 347 (530)
|+.. +...+..+...+.+|--.. + .....|.-++.++ +.||.+.+.. .+....+.
T Consensus 165 Efd~--G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (562)
T 2wdc_A 165 EWTL--GRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERR 242 (562)
T ss_dssp GGGG--CHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHH
T ss_pred hccc--CHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHH
Confidence 9842 2233444444443332110 0 0122455677787 4556654321 11122333
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHH-cCCcEEEEccccCce
Q 009637 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIVFNGHVHAYE 413 (530)
Q Consensus 348 ~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~ye 413 (530)
.+-+.+.|++ .+...+|++.|.|... + ..+..+ .+||++|+||.|...
T Consensus 243 ~~~~v~~l~~---~~~d~iIvLsH~g~~~---------d------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 243 LQEAVDKARA---EGANAVVLLSHNGMQL---------D------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp HHHHHHHHHH---TTCSEEEEEECSCHHH---------H------HHHHTTSSSCCEEEECSSCCCC
T ss_pred HHHHHHHHHH---CCCCEEEEEeCCCCcc---------h------HHHHhcCCCCcEEEeCCCCCCC
Confidence 3333334443 3455799999988531 0 123333 489999999999854
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=6.4e-06 Score=90.28 Aligned_cols=176 Identities=18% Similarity=0.173 Sum_probs=94.1
Q ss_pred CCeEEEEEccCCCCCC-------------------h---HHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccC
Q 009637 197 YPKRIAIVGDLGLTYN-------------------T---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCS 253 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~-------------------~---~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~ 253 (530)
..++|++++|+|.... . ...++++.+.+++ ++|.+||++....+.
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~------------ 78 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYF------------ 78 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHH------------
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceee------------
Confidence 4699999999995421 1 2345566655666 899999999532110
Q ss_pred CCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCC------CCC----CCcceE
Q 009637 254 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE------SGS----LSSFYY 323 (530)
Q Consensus 254 ~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~------~~~----~~~~yY 323 (530)
..+ ......+.|+.+ . +-++++||||+.. +...+..+.....+|--. .+. .-..|-
T Consensus 79 -------~~~--~g~~~~~~ln~l--g-~D~~tlGNHEfd~--G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~ 144 (579)
T 3ztv_A 79 -------TLF--GGSADAAVMNAG--N-FHYFTLGNHEFDA--GNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYD 144 (579)
T ss_dssp -------HTT--TTHHHHHHHHHH--T-CSEEECCSGGGTT--HHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEE
T ss_pred -------eec--CCHHHHHHHHhc--C-cCeeecccccccc--CHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeE
Confidence 000 112234445544 2 3357799999852 223344444444433211 011 112456
Q ss_pred EEEcCc--EEEEEEcc-c-----ccCCC---CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHH
Q 009637 324 SFNAGG--IHFIMLGA-Y-----ISYDK---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392 (530)
Q Consensus 324 sf~~G~--v~fI~Ldt-~-----~~~~~---~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l 392 (530)
-++.++ +-||.+.+ . ..... -....+-+++.+++........+|++.|.+... . .
T Consensus 145 i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~--------d----~-- 210 (579)
T 3ztv_A 145 IFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK--------N----I-- 210 (579)
T ss_dssp EEEETTEEEEEEEEECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH--------H----H--
T ss_pred EEEECCEEEEEEEEEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H--
Confidence 677887 45566633 1 00000 112334455555444334456699999976421 0 1
Q ss_pred HHHHHH-cCCcEEEEccccCce
Q 009637 393 EALLYS-YGVDIVFNGHVHAYE 413 (530)
Q Consensus 393 ~~ll~k-~~VdlvlsGH~H~ye 413 (530)
.+..+ .+||++|+||.|...
T Consensus 211 -~la~~~~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 211 -EIAQKVNDIDVIVTGDSHYLY 231 (579)
T ss_dssp -HHHHHCSSCCEEEECSSCCEE
T ss_pred -HHHHhCCCCCEEEeCCCCccc
Confidence 12222 379999999999866
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=1.8e-06 Score=94.11 Aligned_cols=176 Identities=16% Similarity=0.219 Sum_probs=91.7
Q ss_pred CCeEEEEEccCCCCCC---------------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCcccccCC
Q 009637 197 YPKRIAIVGDLGLTYN---------------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSF 254 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~---------------------~~~~~~~l~~~~p-Dfvl~~GDl~Yad~~~~~G~~~~cy~~~~ 254 (530)
..++|++++|+|.... ....++++.+.+| +++|.+||++....+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------- 89 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 89 (546)
T ss_dssp EEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH--------------
T ss_pred eEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchh--------------
Confidence 4699999999996321 1234566665566 599999999952110
Q ss_pred CCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchH-HHhhhcCCCCCCCC---C---------CCcc
Q 009637 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV-AYSSRFAFPSEESG---S---------LSSF 321 (530)
Q Consensus 255 ~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~-~y~~~f~~P~~~~~---~---------~~~~ 321 (530)
... .......+.|+.+ ... ++++||||+... ...+. .+.....+|--... . ....
T Consensus 90 -----~~~--~~g~~~~~~ln~l--g~d-~~~~GNHEfd~g--~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~ 157 (546)
T 4h2g_A 90 -----FTV--YKGAEVAHFMNAL--RYD-AMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 157 (546)
T ss_dssp -----HHH--HTTHHHHHHHHHH--TCS-EEECCGGGGTTH--HHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBS
T ss_pred -----hhh--hCChHHHHHHHhc--CCc-EEeccCcccccC--HHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCC
Confidence 000 0112334445544 233 577999998421 11222 22222222221100 0 1234
Q ss_pred eEEEEcCcEEE--EEEccccc--C-CC-----CHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHH
Q 009637 322 YYSFNAGGIHF--IMLGAYIS--Y-DK-----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVE 391 (530)
Q Consensus 322 yYsf~~G~v~f--I~Ldt~~~--~-~~-----~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~ 391 (530)
|.-++.+++++ |.+.+... + .+ -....+.+++.+++........+|++.|.+... . ..
T Consensus 158 ~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~--------d----~~ 225 (546)
T 4h2g_A 158 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM--------D----KL 225 (546)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH--------H----HH
T ss_pred eEEEEECCEEEEEEEecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc--------h----HH
Confidence 66678887554 55543210 0 01 112334444444443223455699999987421 0 11
Q ss_pred HHHHHHH-cCCcEEEEccccCce
Q 009637 392 MEALLYS-YGVDIVFNGHVHAYE 413 (530)
Q Consensus 392 l~~ll~k-~~VdlvlsGH~H~ye 413 (530)
+..+ .+||++|+||.|...
T Consensus 226 ---la~~~~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 226 ---IAQKVRGVDVVVGGHSNTFL 245 (546)
T ss_dssp ---HHHHSTTCCEEECCSSCCCC
T ss_pred ---HHHhCCCCcEEEeCCcCccc
Confidence 2222 379999999999854
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.26 E-value=5.2e-07 Score=86.37 Aligned_cols=66 Identities=27% Similarity=0.373 Sum_probs=42.4
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
..|++++||+|..... .+.++.+.. .++|.++++||++.. |. .+ .+.++
T Consensus 12 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~------g~------------------~~-----~~~~~ 62 (221)
T 1g5b_A 12 YRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDR------GA------------------EN-----VECLE 62 (221)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSS------SS------------------CH-----HHHHG
T ss_pred CceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCC------CC------------------Ch-----HHHHH
Confidence 4689999999964221 233444433 368999999999942 22 01 12233
Q ss_pred HhhhcCCeEEccCCcccc
Q 009637 276 NLVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~ 293 (530)
.+. ..+++.+.||||..
T Consensus 63 ~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 63 LIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGG-STTEEECCCHHHHH
T ss_pred HHh-cCCEEEEccCcHHH
Confidence 332 35899999999974
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=7.5e-06 Score=88.35 Aligned_cols=187 Identities=19% Similarity=0.169 Sum_probs=93.7
Q ss_pred CeEEEEEccCCCCCC----------------h---HHHHHHHHhCCCCEEEE-cCccccccccccCCCCCcccccCCCCC
Q 009637 198 PKRIAIVGDLGLTYN----------------T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKT 257 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~----------------~---~~~~~~l~~~~pDfvl~-~GDl~Yad~~~~~G~~~~cy~~~~~~~ 257 (530)
.++|++++|+|.... . ...++++.+.+++.+++ +||++....+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~----------------- 68 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI----------------- 68 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-----------------
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-----------------
Confidence 589999999995321 1 33456666667887766 9999842110
Q ss_pred CccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCC-------CCCC--CcceEEEEcC
Q 009637 258 PIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SGSL--SSFYYSFNAG 328 (530)
Q Consensus 258 ~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~~~--~~~yYsf~~G 328 (530)
...+ ......+.|+.+ -+-++++||||+.. +...+..+.....+|--. .+.. ...|.-++.+
T Consensus 69 --~~~~--~g~~~~~~ln~l---g~D~~tlGNHEfd~--G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~ 139 (509)
T 3ive_A 69 --SSLT--KGKAIIDIMNTM---PFDAVTIGNHEFDH--GWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKD 139 (509)
T ss_dssp --HHTT--TTHHHHHHHTTS---CCSEECCCGGGGTT--CHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEET
T ss_pred --hhhc--CChHHHHHHHhc---CCcEEeeccccccc--CHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEEC
Confidence 0000 112233444333 34467789999852 222333444433333211 0110 2346667888
Q ss_pred cE--EEEEEcccc-----cC----C--CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhH--HHHHHHH
Q 009637 329 GI--HFIMLGAYI-----SY----D--KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE--CMRVEME 393 (530)
Q Consensus 329 ~v--~fI~Ldt~~-----~~----~--~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~--~~r~~l~ 393 (530)
++ -||.+-+.. .. . .-....+.+++.+++.... ...+|+++|.+.-........... .. ..-.
T Consensus 140 G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk~~-~D~iIvl~H~G~~~~~~~~~~~~~~~~~-~~d~ 217 (509)
T 3ive_A 140 GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRAL-DKDI 217 (509)
T ss_dssp TEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHHTTT-CSEEEEEEECSSCCCCCCC---CCCCCC-HHHH
T ss_pred CEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHHHhc-CCEEEEEeccCcCCcccccccccccccc-chHH
Confidence 74 455553210 00 0 0122344555555544333 667999999875322111000000 00 0011
Q ss_pred HHHHH-cCCcEEEEccccCc
Q 009637 394 ALLYS-YGVDIVFNGHVHAY 412 (530)
Q Consensus 394 ~ll~k-~~VdlvlsGH~H~y 412 (530)
.+.++ .+||++|+||.|..
T Consensus 218 ~la~~~~giDlIlgGHtH~~ 237 (509)
T 3ive_A 218 QTASQVKGLDILITGHAHVG 237 (509)
T ss_dssp HHHHHCSSCCEEEEESSCCC
T ss_pred HHHhcCCCCcEEEeCCcCcc
Confidence 23333 37999999999964
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.15 E-value=9.7e-05 Score=80.42 Aligned_cols=194 Identities=19% Similarity=0.167 Sum_probs=96.1
Q ss_pred EEcCCCCCCCCCCeEEEEEccCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCccccccccccCCCC
Q 009637 186 FRTLPASGPQSYPKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTG 246 (530)
Q Consensus 186 F~T~p~~~~~~~~~rf~v~gD~g~~~~--------------~~~~~~~l~----~~~pD-fvl~~GDl~Yad~~~~~G~~ 246 (530)
+-++|........++|++++|+|.... ..+....+. +.+++ ++|.+||++....+.+
T Consensus 3 ~~s~p~~~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~---- 78 (557)
T 3c9f_A 3 LASFPHRNLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSD---- 78 (557)
T ss_dssp --CCCBCCCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHH----
T ss_pred cccCCCCCCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchh----
Confidence 445565544445799999999997521 122233332 35788 5799999995321110
Q ss_pred CcccccCCCCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCcccccccc-ccchHHHhhhcCCCCCCC--------CC
Q 009637 247 SDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEES--------GS 317 (530)
Q Consensus 247 ~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~--------~~ 317 (530)
.+..+.....+.|+.+ .. =++++||||+..... ...+........+|--.. +.
T Consensus 79 ---------------~~~~~g~~~~~~ln~l--g~-Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~ 140 (557)
T 3c9f_A 79 ---------------ITSPNGLKSTPIFIKQ--DY-DLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGL 140 (557)
T ss_dssp ---------------SSSSTTTTTHHHHTTS--CC-SEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSC
T ss_pred ---------------hcccCCHHHHHHHHhc--CC-CEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCC
Confidence 0000011123444443 23 356889999963210 012332333333332111 11
Q ss_pred ---CCcceEEEEc--CcEE--EEEEcccccCC------CCHHH--H-HHHHHHHhcccCCCCCEEEEEeCCCCccCCCCC
Q 009637 318 ---LSSFYYSFNA--GGIH--FIMLGAYISYD------KSGHQ--Y-KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSH 381 (530)
Q Consensus 318 ---~~~~yYsf~~--G~v~--fI~Ldt~~~~~------~~~~Q--~-~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~ 381 (530)
....|.-++. ++++ ||.+.+..... ....+ . +|+++.++ .+...+|+++|.+....
T Consensus 141 ~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~---- 212 (557)
T 3c9f_A 141 FVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHN---- 212 (557)
T ss_dssp EEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTT----
T ss_pred ccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCcccc----
Confidence 1234667787 7754 55554421100 01222 1 36665442 34667999999886311
Q ss_pred CchhHHHHHHHHHHHHH--cCCcE-EEEccccCce
Q 009637 382 YREAECMRVEMEALLYS--YGVDI-VFNGHVHAYE 413 (530)
Q Consensus 382 ~~~~~~~r~~l~~ll~k--~~Vdl-vlsGH~H~ye 413 (530)
..+. ......+.+ .+||+ +|+||.|...
T Consensus 213 ~d~~----~~~~~~lA~~~~giDilIlgGHtH~~~ 243 (557)
T 3c9f_A 213 WGEF----YQVHQYLRQFFPDTIIQYFGGHSHIRD 243 (557)
T ss_dssp TCHH----HHHHHHHHHHCTTSEEEEEECSSCCEE
T ss_pred Cccc----cHHHHHHHHhCCCCCEEEECCCCCCCC
Confidence 1111 122222333 48995 9999999873
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.14 E-value=3.6e-05 Score=76.33 Aligned_cols=191 Identities=17% Similarity=0.180 Sum_probs=101.6
Q ss_pred CeEEEEEccCCCCCCh---HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT---TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~---~~~~~~l~~~-~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~ 273 (530)
.+||+++||.+..... ...++++.+. ++|+++..||.+.. |.. + . ....+.
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~g------G~g------------~----~---~~~~~~ 58 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH------GKG------------L----S---LKHYEF 58 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTT------TSS------------C----C---HHHHHH
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCC------CCC------------c----C---HHHHHH
Confidence 4899999999844221 2234555543 68999999998842 321 1 0 122334
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhh--c----CCCCCCCC-CCCcceEEEEcCcEE--EEEEcccccCC--
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--F----AFPSEESG-SLSSFYYSFNAGGIH--FIMLGAYISYD-- 342 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~--f----~~P~~~~~-~~~~~yYsf~~G~v~--fI~Ldt~~~~~-- 342 (530)
|..+ .+- .++.||||+.... ....|... . ++|..... ..+..|.-++.++++ +|.|-+...+.
T Consensus 59 ln~~--G~D-a~TlGNHefD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~ 132 (281)
T 1t71_A 59 LKEA--GVN-YITMGNHTWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPF 132 (281)
T ss_dssp HHHH--TCC-EEECCTTTTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSS
T ss_pred HHhc--CCC-EEEEccCcccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCc
Confidence 4433 333 4566999996431 12223322 1 22221100 023457778888744 55554432122
Q ss_pred CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCc
Q 009637 343 KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 422 (530)
Q Consensus 343 ~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~ 422 (530)
.-..-.+.+++.++ +.+...+||.+|--. ..+ .+.+.. .-.-+||+|+.||+|...-.. .
T Consensus 133 ~~~~pf~~a~~~v~---~~~~diIIv~~H~g~-------t~E----k~~la~-~~dg~VD~VvGgHTHv~t~d~-----~ 192 (281)
T 1t71_A 133 KTTNPFKVLKELIL---KRDCDLHIVDFHAET-------TSE----KNAFCM-AFDGYVTTIFGTHTHVPSADL-----R 192 (281)
T ss_dssp CBCCHHHHHHHHHT---TCCCSEEEEEEECSC-------HHH----HHHHHH-HHTTTSSEEEEESSSSCCTTC-----E
T ss_pred cccCHHHHHHHHHh---hcCCCEEEEEeCCCc-------hHH----HHHHHH-hCCCCeEEEEeCCCCcCCCce-----E
Confidence 12223445666666 346778999999421 011 122222 123469999999999754321 1
Q ss_pred cCCCCcEEEEe-CCCccc
Q 009637 423 LDPCGPVHITI-GDGGNL 439 (530)
Q Consensus 423 ~~~~G~vyIv~-G~gG~~ 439 (530)
.-++|+.||+. |..|..
T Consensus 193 il~~gt~~i~d~G~~G~y 210 (281)
T 1t71_A 193 ITPKGSAYITDVGMCGPG 210 (281)
T ss_dssp ECTTSCEEESCCCEEBCC
T ss_pred EecCCcEEEecCccccCC
Confidence 23478888872 444443
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.10 E-value=9e-05 Score=72.45 Aligned_cols=188 Identities=16% Similarity=0.140 Sum_probs=100.2
Q ss_pred eEEEEEccCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 199 ~rf~v~gD~g~~~~---~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
+||+++||.=.... ....++++.+.. |+++..|+.+. .|.. +. ....+.|.
T Consensus 1 m~ilf~GDv~g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~------~G~g------------~~-------~~~~~~l~ 54 (255)
T 1t70_A 1 MRVLFIGDVFGQPGRRVLQNHLPTIRPQF-DFVIVNMENSA------GGFG------------MH-------RDAARGAL 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGGGC-SEEEEECTBTT------TTSS------------CC-------HHHHHHHH
T ss_pred CEEEEEeccCChHHHHHHHHHHHHHHhhC-CEEEECCCCcc------CCcC------------CC-------HHHHHHHH
Confidence 58999999742211 123455665556 99998888774 2321 11 12233344
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhhhcC----CCCCC--CCCCCcceEEEEcCcEE--EEEEcccccCCCCHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEE--SGSLSSFYYSFNAGGIH--FIMLGAYISYDKSGHQ 347 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~----~P~~~--~~~~~~~yYsf~~G~v~--fI~Ldt~~~~~~~~~Q 347 (530)
.+ .+-. ++.||||+... ....|..... .|.|- ++..+..|.-++.++.+ +|.|-+......-..-
T Consensus 55 ~~--G~Da-~TlGNHefD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p 127 (255)
T 1t70_A 55 EA--GAGC-LTLGNHAWHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp HH--TCSE-EECCTTTTSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred hC--CCCE-EEeccccccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCH
Confidence 33 3444 45699999732 2333433221 23321 12234567778888744 4555443211122233
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCC
Q 009637 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (530)
Q Consensus 348 ~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G 427 (530)
.+-+++.+++. +...+||.+|--. ..+ .+.+.. ...-+||+++.||+|...-.. ..-|+|
T Consensus 128 ~~~~~~~v~~l---~~d~IIv~~H~e~-------t~E----k~~la~-~~dg~vd~VvGgHTHv~~~d~-----~il~~g 187 (255)
T 1t70_A 128 FRTMDALLERD---DLGTVFVDFHAEA-------TSE----KEAMGW-HLAGRVAAVIGTHTHVPTADT-----RILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSC-------HHH----HHHHHH-HHTTSSSEEEEESSCSCBSCC-----EEETTT
T ss_pred HHHHHHHHHHh---CCCEEEEEeCCCC-------hHH----HHHHHH-hCCCCeEEEEeCCCCcCCCce-----EEcCCC
Confidence 44566666665 4667999999411 111 122222 223459999999999754321 112478
Q ss_pred cEEEE-eCCCccc
Q 009637 428 PVHIT-IGDGGNL 439 (530)
Q Consensus 428 ~vyIv-~G~gG~~ 439 (530)
+.||+ .|..|..
T Consensus 188 t~~i~d~G~~G~y 200 (255)
T 1t70_A 188 TAYQTDAGFTGPH 200 (255)
T ss_dssp EEEESCCCCBEES
T ss_pred eEEEEcCcccccC
Confidence 88886 3555554
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.06 E-value=9e-05 Score=72.22 Aligned_cols=188 Identities=18% Similarity=0.273 Sum_probs=100.6
Q ss_pred eEEEEEccCCCCCC---hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYN---TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 199 ~rf~v~gD~g~~~~---~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
+||+++||.=.... ....+.++.+.. |+++..|..+. .|.. + . ....+.|.
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~------~G~g------------~----~---~~~~~~l~ 54 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAA------RGKG------------L----D---RRSYRLLR 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTT------TTSS------------C----C---HHHHHHHH
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCcc------CCCC------------c----C---HHHHHHHH
Confidence 58999999743211 233466666666 99887776653 2431 1 1 12233444
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhhhc--CCCCCC-CCCCCcceEEEEcCcEEEEEEc--ccccCCCCHHHHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF--AFPSEE-SGSLSSFYYSFNAGGIHFIMLG--AYISYDKSGHQYKW 350 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f--~~P~~~-~~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~~~~Q~~W 350 (530)
.+ .+-.+ +.||||+... ....|.... -.|.+- .+.....|.-++.++.++-+++ +......-..-.+-
T Consensus 55 ~~--G~D~~-T~GNHefD~~----~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~ 127 (252)
T 2z06_A 55 EA--GVDLV-SLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp HH--TCCEE-ECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred hC--CCCEE-EeccEeeECc----hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHH
Confidence 43 44554 6799999742 233343322 112221 1122456777888886665554 33211122222334
Q ss_pred HHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEE
Q 009637 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (530)
Q Consensus 351 L~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vy 430 (530)
+++.+++.. .+.+|+.+|--.- .+ .+.+.. ...-+||+|+.||+|....- ...-++|+.|
T Consensus 128 ~~~~v~~lk---~d~IIv~~H~g~t-------se----k~~la~-~~dg~Vd~VvGgHTHv~t~d-----~~il~~gt~~ 187 (252)
T 2z06_A 128 LDRLLEEEK---ADYVLVEVHAEAT-------SE----KMALAH-YLDGRASAVLGTHTHVPTLD-----ATRLPKGTLY 187 (252)
T ss_dssp HHHHHHHCC---CSEEEEEEECSCH-------HH----HHHHHH-HHBTTBSEEEEESSCSCBSC-----CEECTTSCEE
T ss_pred HHHHHHHhC---CCEEEEEeCCCcH-------HH----HHHHHH-hCCCCeEEEEcCCCCcCCCc-----cEEcCCCcEe
Confidence 555566543 6679999995210 11 122221 22346999999999974432 2223588999
Q ss_pred EE-eCCCccc
Q 009637 431 IT-IGDGGNL 439 (530)
Q Consensus 431 Iv-~G~gG~~ 439 (530)
|+ .|..|..
T Consensus 188 itd~G~~G~y 197 (252)
T 2z06_A 188 QTDVGMTGTY 197 (252)
T ss_dssp ESCCCCBEES
T ss_pred ecCCcccccC
Confidence 87 3555553
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00031 Score=71.71 Aligned_cols=40 Identities=20% Similarity=0.222 Sum_probs=27.8
Q ss_pred CCeEEEEEccCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCcccc
Q 009637 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTY 236 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~-----------------~~~~~~~l~~~~pD-fvl~~GDl~Y 236 (530)
..++|++.+|+|.... ....++++.+..++ ++|..||++.
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~q 67 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQ 67 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSC
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCC
Confidence 3689999999996521 12345666655565 6678999994
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0023 Score=65.13 Aligned_cols=40 Identities=23% Similarity=0.202 Sum_probs=28.7
Q ss_pred CCeEEEEEccCCCCCC-----------------hHHHHHHHHhCCCC-EEEEcCcccc
Q 009637 197 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEPD-LVLLVGDVTY 236 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~-----------------~~~~~~~l~~~~pD-fvl~~GDl~Y 236 (530)
..++|++.+|+|.... ....++++.+..++ ++|..||++.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~q 64 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQ 64 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCC
Confidence 3689999999996421 13356666666665 7789999994
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0013 Score=71.22 Aligned_cols=173 Identities=17% Similarity=0.217 Sum_probs=87.2
Q ss_pred CCeEEEEEccCCCCCC------------------h---HHHHHHHHhCCCC-EEEEcCccccccccccCCCCCcccccCC
Q 009637 197 YPKRIAIVGDLGLTYN------------------T---TCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSF 254 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~------------------~---~~~~~~l~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~ 254 (530)
+.++|++.+|+|.... . ...++++.+.+++ ++|..||++....+
T Consensus 2 f~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~-------------- 67 (530)
T 4h1s_A 2 WELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIW-------------- 67 (530)
T ss_dssp CEEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH--------------
T ss_pred EEEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHH--------------
Confidence 3589999999995321 1 2345666555665 67889999953211
Q ss_pred CCCCccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccch-HHHhhhcCCCCCCC------------CCCCcc
Q 009637 255 SKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTF-VAYSSRFAFPSEES------------GSLSSF 321 (530)
Q Consensus 255 ~~~~~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f-~~y~~~f~~P~~~~------------~~~~~~ 321 (530)
...+ +.....+.|+.+. .=..++||||+... ...+ ..+.....+|--.. ...-..
T Consensus 68 -----~~~~--~g~~~i~~mN~lg---yDa~~lGNHEFd~G--~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~p 135 (530)
T 4h1s_A 68 -----FTVY--KGAEVAHFMNALR---YDAMALGNHEFDNG--VEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLP 135 (530)
T ss_dssp -----HHHH--TTHHHHHHHHHTT---CCEEECCGGGGTTT--THHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBS
T ss_pred -----HHHh--CChHHHHHHhccC---CCEEEEchhhhccC--HHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccc
Confidence 0001 1122234444431 23568999999532 1111 11222222332110 011234
Q ss_pred eEEEEcCcEEE--EEEcccc-----------cCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHH
Q 009637 322 YYSFNAGGIHF--IMLGAYI-----------SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECM 388 (530)
Q Consensus 322 yYsf~~G~v~f--I~Ldt~~-----------~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~ 388 (530)
|.-++.+++++ |.+-+.. .+...-+..+...++|++ .+...+|++.|.-.- ..
T Consensus 136 y~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~--------~d--- 201 (530)
T 4h1s_A 136 YKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE--------MD--- 201 (530)
T ss_dssp EEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH---
T ss_pred eEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch--------HH---
Confidence 66778888554 5544321 011122233333444544 345569999996421 11
Q ss_pred HHHHHHHHHHc-CCcEEEEccccCce
Q 009637 389 RVEMEALLYSY-GVDIVFNGHVHAYE 413 (530)
Q Consensus 389 r~~l~~ll~k~-~VdlvlsGH~H~ye 413 (530)
..+.++. +||+++.||.|..-
T Consensus 202 ----~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 202 ----KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ----HHHHHHSTTCCEEECCSSCCCB
T ss_pred ----HHHHhcCCCCCeeccCCcccee
Confidence 1133333 79999999999753
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.016 Score=47.99 Aligned_cols=96 Identities=22% Similarity=0.286 Sum_probs=59.1
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcc--eEEEEEEEEeeeccccCCccccc
Q 009637 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLN--HEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 74 ~~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~--~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
..|..+.+.... +++++.|+|......-| + ...=.|+|....+... .... ..
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~~~----~~------------- 64 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANG-------K-ITAYILFYTLDKNIPIDDWIME----TI------------- 64 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSS-------C-CSEEEEEEESCSSSCTTTSEEE----EE-------------
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCC-------c-eeEEEEEEEeCCCCCccceEEE----EE-------------
Confidence 468888877653 47899999987532111 0 1234566765432211 1110 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCCC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 194 (530)
......+.|++|+|+|.|.+||...+. +.+|+...|+|.+.+..
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 65 SGDRLTHQIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp ETTCCEEEECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 112246788999999999999975432 36788899999876543
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0013 Score=64.46 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=26.1
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhCCC-CEEEEcCcccc
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSNEP-DLVLLVGDVTY 236 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~~p-Dfvl~~GDl~Y 236 (530)
.|++++||+|.... ..++++.+...++ |.++++||++.
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd 58 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVN 58 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSS
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCC
Confidence 48999999995421 1233444444454 99999999994
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.021 Score=47.64 Aligned_cols=96 Identities=16% Similarity=0.195 Sum_probs=56.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC---cceEEEEEEEEeeeccccCCccccc
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN---LNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~---~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
..|..+++.-. +.+++.|+|.-.....+. + ....=.|+|...... ..... ..
T Consensus 10 ~~P~~~~~~~~-~~~si~l~W~~p~~~~~~-----g-~i~gY~v~y~~~~~~~~~~~~~~-----~~------------- 64 (114)
T 1x4y_A 10 AGPYITFTDAV-NETTIMLKWMYIPASNNN-----T-PIHGFYIYYRPTDSDNDSDYKKD-----MV------------- 64 (114)
T ss_dssp SCCEEEEEECS-SSSCEEEEEECCCTTSCC-----C-CCCEEEEEECCTTSCSGGGCCCE-----EE-------------
T ss_pred CCCeEEEEEec-CCCEEEEEEeCCCchhcC-----C-ccceEEEEEEECCCCCCcceeeE-----ec-------------
Confidence 45788776543 478999999875311000 0 012234666544332 11000 00
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCCCCC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPASGP 194 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~~~ 194 (530)
.+-...+.|++|+|+|.|.+||..-+ .+.+|+...++|.+.+.+
T Consensus 65 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~p 111 (114)
T 1x4y_A 65 EGDRYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSGP 111 (114)
T ss_dssp ETTCCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCCS
T ss_pred CCcEeEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCCC
Confidence 01123578999999999999996533 236888999999876543
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.002 Score=63.80 Aligned_cols=67 Identities=22% Similarity=0.383 Sum_probs=40.7
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
+|++++||+|..... ...++.+.. .++|.++++||++.. |.. + .+..+.+..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdr------G~~------------------s--~~~l~~l~~ 54 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVAR------GPG------------------S--LDVLRYVKS 54 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSS------SSC------------------H--HHHHHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCC------CCc------------------c--HHHHHHHHh
Confidence 478999999965321 223333332 367999999999942 320 1 122333333
Q ss_pred hhhcCCeEEccCCcccc
Q 009637 277 LVSKVPIMVVEGNHEIE 293 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~ 293 (530)
+ ..+++.+.||||..
T Consensus 55 l--~~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 55 L--GDSVRLVLGNHDLH 69 (280)
T ss_dssp T--GGGEEECCCHHHHH
T ss_pred C--CCceEEEECCCcHH
Confidence 3 23799999999974
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.047 Score=46.53 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=55.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc--ceEEEEEEEEeeeccccCCcccccc
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL--NHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
..|.++++.-- +.+++.|+|.-....-|. +. .....=.|+|....... ...+.
T Consensus 20 ~~P~~l~~~~~-s~tsi~lsW~~p~~~~~~-i~---~~~~~Y~v~y~~~~~~~~~~~~~~-------------------- 74 (123)
T 2edd_A 20 LPPVGVQAVAL-THDAVRVSWADNSVPKNQ-KT---SEVRLYTVRWRTSFSASAKYKSED-------------------- 74 (123)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECSSSCSSC-CC---SCCCCEEEEEEETTCTTCCCCCEE--------------------
T ss_pred CCCcceEEEEc-CCCeEEEEecCCCCCccc-cc---CcCceEEEEEEECCCCCccEEEEe--------------------
Confidence 46888876543 378999999853211110 00 00012356676542210 11010
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCC
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPA 191 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 191 (530)
.....+.|+||+|+|.|.++|...+ .+.||....|+|.+.
T Consensus 75 ~~~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 75 TTSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp ESSSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred CCceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 0123678999999999999997543 236888999999876
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.024 Score=46.86 Aligned_cols=92 Identities=14% Similarity=0.116 Sum_probs=54.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-.-..+++.|+|......-|.. ...=.|+|.......+..+. . + ..
T Consensus 11 ~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~------~------~-------~~ 64 (110)
T 2crz_A 11 PCLPPRLQGRPKAKEIQLRWGPPLVDGGSP-------ISCYSVEMSPIEKDEPREVY------Q------G-------SE 64 (110)
T ss_dssp CCCCCEECSCCCSSEEEEECCCCSCCTTSC-------CCEEEEEEECTTSCCCEEEE------E------E-------SC
T ss_pred CCCCceeccccCCCEEEEEeCCCCCCCCce-------eEEEEEEEEeCCCCceEEEE------e------C-------Cc
Confidence 567777643334678999996532111110 12235666654433332221 0 0 11
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.|||...+. +.+|+...++|.+.+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 65 VECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 35678999999999999975432 367888889987654
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.022 Score=46.90 Aligned_cols=40 Identities=25% Similarity=0.442 Sum_probs=31.6
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 194 (530)
..+.|++|+|+|.|.+||...+. +.+|+...|+|.+.+++
T Consensus 66 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 66 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred CEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 36788999999999999965332 36889999999887654
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.064 Score=44.68 Aligned_cols=92 Identities=20% Similarity=0.200 Sum_probs=56.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCC-CccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGE-FQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~-~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|.++++... ..+++.|+|.-.. ..-| . ...=.|+|........... ... ..-
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~g-~-------i~~Y~v~~~~~~~~~~~~~-------~~~----------~~~ 73 (120)
T 1x5f_A 20 APRDVVASLV-STRFIKLTWRTPASDPHG-D-------NLTYSVFYTKEGIARERVE-------NTS----------HPG 73 (120)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSSCSSC-C-------SSEEEEEEEETTCCCCEEE-------ECS----------STT
T ss_pred CCCCcEEEec-CCCEEEEEECCCCCCCCC-c-------EEEEEEEEEECCCCCceEE-------Eec----------cCC
Confidence 5778877544 3789999998743 1111 0 1234567766543222111 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 74 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 115 (120)
T 1x5f_A 74 EMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPES 115 (120)
T ss_dssp CSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCC
Confidence 3467889999999999999764422 46888899997654
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.13 E-value=0.021 Score=47.02 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=29.4
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
.+.|+||+|+|.|.+||...+. +.+|+...++|.+..
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 5678999999999999975432 357888999998654
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.026 Score=59.54 Aligned_cols=181 Identities=15% Similarity=0.248 Sum_probs=95.8
Q ss_pred CeEEEEEccCCCCCCh-H--HH----HHHHH-----------hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCc
Q 009637 198 PKRIAIVGDLGLTYNT-T--CT----INHMS-----------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 259 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~--~~----~~~l~-----------~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~ 259 (530)
+.++++++|+|.+... . .. ++.|. ..++.-+|++||.+..... .. +...
T Consensus 200 ~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~---~~----------e~~~ 266 (476)
T 3e0j_A 200 DRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQ---SR----------DSIN 266 (476)
T ss_dssp CCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC----------------------
T ss_pred CCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccc---cc----------hhhh
Confidence 4699999999998752 1 11 23332 1367899999999954211 00 0001
Q ss_pred cccc---------hHHHHHHHHHHHHhhhcCCeEEccCCccccccccc------cchHHHh--hhcCCCCCCCCCCCcce
Q 009637 260 HETY---------QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN------QTFVAYS--SRFAFPSEESGSLSSFY 322 (530)
Q Consensus 260 ~~~y---------~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~------~~f~~y~--~~f~~P~~~~~~~~~~y 322 (530)
...| ....+.+..++..+...+|+.++|||||-....-. .-|..-. ..+.. .+| =
T Consensus 267 ~~~y~~~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~~lfp~s~~~~~~~~-------vtN-P 338 (476)
T 3e0j_A 267 KAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQL-------VTN-P 338 (476)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCTTSCHHHHTSTTEEE-------CCS-S
T ss_pred hhhccccccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCHHHhhhhhhcCccEE-------eCC-C
Confidence 1111 12345666778888899999999999998643211 0111000 01111 112 3
Q ss_pred EEEEcCcEEEEEEcccc-----cCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHH
Q 009637 323 YSFNAGGIHFIMLGAYI-----SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 397 (530)
Q Consensus 323 Ysf~~G~v~fI~Ldt~~-----~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~ 397 (530)
|.|++++++|++..... .+...+.-++.|++.|+.- .-+| ..--.-|.|...... ++.-
T Consensus 339 ~~~~i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkwr--HlAP--TaPdTl~~yP~~~~D------------pfVi 402 (476)
T 3e0j_A 339 YQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVR--HISP--TAPDTLGCYPFYKTD------------PFIF 402 (476)
T ss_dssp EEEEETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBT--CSCT--TSCCC------CCSC------------TTSC
T ss_pred eEEEECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHh--ccCC--CCCCceeeccCCCCC------------ceee
Confidence 55999999999886521 1222345667888888762 1111 000000111110000 1122
Q ss_pred HcCCcEEEEccccCceee
Q 009637 398 SYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 398 k~~VdlvlsGH~H~yeR~ 415 (530)
+.-.+++++||.|.|+-.
T Consensus 403 ~~~PhVyf~Gnq~~f~t~ 420 (476)
T 3e0j_A 403 PECPHVYFCGNTPSFGSK 420 (476)
T ss_dssp SSCCSEEEEEEESSCEEE
T ss_pred cCCCcEEEeCCCCcccee
Confidence 345889999999998864
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.023 Score=46.65 Aligned_cols=92 Identities=16% Similarity=0.178 Sum_probs=53.3
Q ss_pred CceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEE
Q 009637 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIH 155 (530)
Q Consensus 76 P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h 155 (530)
|..+.+.... .+ +.|+|......-|. | ...=.|+|.......+... +... . ..+-..
T Consensus 10 P~~~~~~~~~-~~-v~l~W~~P~~~~G~---p----i~~Y~v~~~~~~~~~~~~~------~~~~-------~-~~~~~~ 66 (105)
T 2haz_A 10 PSIDQVEPYS-ST-AQVQFDEPEATGGV---P----ILKYKAEWRAVGEEVWHSK------WYDA-------K-EASMEG 66 (105)
T ss_dssp CEEEEEEECS-SC-EEEEEECCSCCTTS---C----CCEEEEEEEETTCCCCEEE------EEEH-------H-HHHHHS
T ss_pred CCCCEEEEcC-Cc-EEEEEcCCcccCCc---c----ccEEEEEEEECCCCCCccc------eEEc-------c-ccCCcc
Confidence 7777765544 34 99999875322111 0 1223577766543322111 0000 0 001124
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
.+.|++|+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 67 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 67 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 6788999999999999965332 3678889999987
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.039 Score=45.71 Aligned_cols=89 Identities=19% Similarity=0.179 Sum_probs=53.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.-. +.+++.|+|......-| ....=.|+|..........+.. ..
T Consensus 20 ~P~~l~~~~~-~~~si~l~W~~p~~~~~--------~i~~Y~v~~~~~~~~~~~~~~~--------------------~~ 70 (116)
T 1x5g_A 20 PAPNLRAYAA-SPTSITVTWETPVSGNG--------EIQNYKLYYMEKGTDKEQDVDV--------------------SS 70 (116)
T ss_dssp CCSSCEEEEE-ETTEEEEECCCCSCCSS--------CCSEEEEEEEETTCCCCCCEEE--------------------CS
T ss_pred CCCccEEEec-CCCEEEEEEeCCCCCCC--------cccEEEEEEEECCCCccEEEec--------------------CC
Confidence 5677766533 36899999976432111 0122346665544322211110 11
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||..-+. +.+|+...|+|.+..
T Consensus 71 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 111 (116)
T 1x5g_A 71 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDS 111 (116)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSS
T ss_pred ceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCC
Confidence 36788999999999999965332 357888889997653
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.0064 Score=61.04 Aligned_cols=70 Identities=17% Similarity=0.181 Sum_probs=41.6
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
.+++++||+|..... ...++.+.....+.++++||+++. |.. + .+....+..+
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDR------G~~------------------s--~evl~lL~~l 103 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDR------GYY------------------S--VETVTLLVAL 103 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSS------STT------------------H--HHHHHHHHHH
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCC------CCC------------------h--HHHHHHHHHH
Confidence 479999999965321 223333333456788999999952 320 1 1223333333
Q ss_pred hh--cCCeEEccCCccccc
Q 009637 278 VS--KVPIMVVEGNHEIEA 294 (530)
Q Consensus 278 ~~--~vP~~~v~GNHD~~~ 294 (530)
.. .-.++.+.||||...
T Consensus 104 k~~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 104 KVRYRERITILRGNHESRQ 122 (309)
T ss_dssp HHHCTTTEEECCCTTSSTT
T ss_pred HhhCCCcEEEEeCCCCHHH
Confidence 22 234999999999863
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.025 Score=47.46 Aligned_cols=95 Identities=21% Similarity=0.225 Sum_probs=55.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.+|++.--. .+++.|+|.-....-+..+ .....=.|+|......... ..+ ...-
T Consensus 10 ~~P~~l~~~~~s-~tsi~lsW~~p~~~~~~~~----~~~~~Y~v~y~~~~~~~~~------~~~------------~~~~ 66 (113)
T 1x5j_A 10 MPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTK------YKN------------ANAT 66 (113)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECTTSCSSSCC----CSSCEEEEEECBSSSSSCC------CEE------------CCBC
T ss_pred CCCcceEEEEec-CCEEEEEecCCCCcccccc----CcCceEEEEEEECCCCCeE------EEE------------EecC
Confidence 468888776543 7899999986432111000 0001234667652111000 000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 191 (530)
...+.|+||+|+|.|.++|..-+ .+.||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 24688999999999999997533 236888899999865
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0087 Score=48.61 Aligned_cols=88 Identities=18% Similarity=0.213 Sum_probs=51.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCC--CccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGE--FQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~--~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
..|..+.+... +.+++.|+|.... ..-| ....=.|+|............+
T Consensus 10 ~~P~~l~~~~~-~~~si~l~W~~p~~~~~~g--------~i~~Y~i~~~~~~~~~~~~~~~------------------- 61 (103)
T 2edy_A 10 GFPQNLHVTGL-TTSTTELAWDPPVLAERNG--------RIISYTVVFRDINSQQELQNIT------------------- 61 (103)
T ss_dssp CCCEEEECSSB-CSSCEECEEECCCTTSCSS--------CCCEEEEEEEETTSCCEEEEEE-------------------
T ss_pred CCCeeeEEEec-CCCEEEEEECCCCCcCCCC--------cEeEEEEEEEECCCCccEEEcC-------------------
Confidence 35777766432 4689999998752 1111 0122346665554321111100
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
-...+.|+||+|+|.|.+||...+. +.+|+...|+|.|
T Consensus 62 -~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 62 -TDTRFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp -SSSCCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred -CcceEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 0124578999999999999965332 3577777888865
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.061 Score=43.86 Aligned_cols=89 Identities=19% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.... .+++.|+|......-| ....=.|+|............. . .
T Consensus 10 ~P~~l~~~~~~-~~si~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~~~------------------~--~ 60 (106)
T 2ed8_A 10 PVENLQAVSTS-PTSILITWEPPAYANG--------PVQGYRLFCTEVSTGKEQNIEV------------------D--G 60 (106)
T ss_dssp CCEEEEEECSS-TTEEEEEEECCSSCSS--------CCCEEEEEEEETTTCCEEEEEE------------------C--S
T ss_pred CCceeEEEecC-CCEEEEEECCCCCCCC--------CeeEEEEEEEECCCCceEEEeC------------------C--c
Confidence 58888775443 6899999987532111 0123456666554332211100 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||..-+.. .+|+...++|....
T Consensus 61 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 101 (106)
T 2ed8_A 61 LSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDS 101 (106)
T ss_dssp SCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCC
Confidence 356789999999999999764422 47788889997643
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.045 Score=44.88 Aligned_cols=88 Identities=18% Similarity=0.189 Sum_probs=53.8
Q ss_pred CCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|.++.+... .+.+++.|+|.-....-| + ...=.|+|....+..+..... .
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~~------------------~-- 61 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHG-------L-IREYIVEYSRSGSKMWASQRA------------------A-- 61 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSS-------C-EEEEEEEEEETTCSCCEEEEE------------------S--
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCC-------c-EEEEEEEEEECCCCCeEEecC------------------C--
Confidence 5888877654 357899999987431111 0 011245565544332221100 0
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
...+.|++|+|+|.|.+||..-+. +.+|+...++|.+
T Consensus 62 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 62 SNFTEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp SSEEEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred ccEEEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 126789999999999999975332 2578889999964
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.057 Score=45.14 Aligned_cols=39 Identities=31% Similarity=0.367 Sum_probs=30.5
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 193 (530)
..+.|+||+|+|.|.+||..-+. +.+|+...|+|.+.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 74 YSARLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 36789999999999999975332 3578888999976554
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.75 E-value=0.075 Score=43.61 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=29.0
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
.+.|++|+|+|.|.|||...+.. .+|+...++|.+..
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 104 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDS 104 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCC
Confidence 56789999999999999765432 46778889998753
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.71 E-value=0.038 Score=45.32 Aligned_cols=38 Identities=29% Similarity=0.447 Sum_probs=29.9
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 63 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 35778999999999999975332 257888999998754
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.086 Score=43.99 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=51.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.+++++-- +.+++.|+|.-.... ...=.|+|....+....... + ++-
T Consensus 9 ~pP~~l~~~~v-t~tsi~vsW~pp~~~-----------i~~Y~I~y~~~~~~~~~~~~----v--------------~~~ 58 (108)
T 2ee3_A 9 APPRHLGFSDV-SHDAARVFWEGAPRP-----------VRLVRVTYVSSEGGHSGQTE----A--------------PGN 58 (108)
T ss_dssp CCSSCEEEESC-CSSCEEEEESCCSSC-----------CSEEEEEEEETTTCCBCCEE----E--------------ETT
T ss_pred CCCceEEEEEc-cCCeEEEEeeCCCCC-----------ccEEEEEEEeCCCCceeEEE----c--------------CCC
Confidence 45888887533 378999999653211 12335667655432111110 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 192 (530)
...+.|+||+|+|.|..+|..-+..+.|. ...|+|.+.+
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEECTTSCEEEEEEEEECCCCC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEeCCCcCCCccCEEEeCCCC
Confidence 23678999999999999997644334333 3468886433
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.077 Score=44.02 Aligned_cols=93 Identities=15% Similarity=0.150 Sum_probs=53.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++++... +.+++.|+|.-....-| + ...=.|+|........... .. ...-
T Consensus 19 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~-------~-i~~Y~v~~~~~~~~~~~~~-------~~----------~~~~ 72 (119)
T 2ed7_A 19 SAPRDVVPVLV-SSRFVRLSWRPPAEAKG-------N-IQTFTVFFSREGDNRERAL-------NT----------TQPG 72 (119)
T ss_dssp CCCSCCEEEEE-CSSCEEEECCCCSCCSS-------C-EEEEEEEEEESSCCCCEEE-------EC----------CCTT
T ss_pred cCCcceEEEec-CCCEEEEEEeCCCCCCC-------c-EEEEEEEEEeCCCCcceee-------Ee----------ecCC
Confidence 35777776643 37899999975431100 0 0112355554433222111 00 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.+||..-+ .+.+|+...++|.+..
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 114 (119)
T 2ed7_A 73 SLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPES 114 (119)
T ss_dssp CCEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCCS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCC
Confidence 34678899999999999986432 2367888999997653
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.074 Score=42.83 Aligned_cols=88 Identities=18% Similarity=0.150 Sum_probs=52.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-.. .+++.|+|...... ...=.|+|........... ... +.-.
T Consensus 4 ~P~~l~v~~~~-~~sv~l~W~~p~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (98)
T 3teu_A 4 APTDLQVTNVT-DTSITVSWTPPSAT-----------ITGYRITYTPSNGPGEPKE----LTV-------------PPSS 54 (98)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTSCSCCEE----EEE-------------CTTC
T ss_pred CCCceEEEEec-CCEEEEEEeCCCCc-----------ccEEEEEEEECCCCCceEE----EEc-------------CCCc
Confidence 57888775433 68999999864211 1223577764432111110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~ 191 (530)
..+.|+||+|+|.|.+||...+..+.|+...+.+++.
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 55 TSVTITGLTPGVEYVVSVYALKDNQESPPLVGTQTTG 91 (98)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECS
T ss_pred CEEEecCCCCCCEEEEEEEEEeCCCCCCCeEEEeccC
Confidence 4678999999999999998655456776666665544
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.043 Score=46.48 Aligned_cols=83 Identities=19% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEEEEEeCCCCC
Q 009637 85 FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEP 164 (530)
Q Consensus 85 ~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P 164 (530)
...+++.|+|..... |. .| ...=.|+|.......+...... + + ....++|.+|+|
T Consensus 19 ~~~~sv~L~W~p~~d--gg--sP----I~~Y~I~yr~~~~~~w~~~~~~--------~--~-------~~~~~~l~~L~p 73 (114)
T 2kbg_A 19 SSGKSFKLSITKQDD--GG--AP----ILEYIVKYRSKDKEDQWLEKKV--------Q--G-------NKDHIILEHLQW 73 (114)
T ss_dssp CSTTCEEEEECCCCC--SS--SC----CSEEEEEEEESSCCSCCEEEEE--------E--T-------TTCCEEECCCCT
T ss_pred cCCCEEEEEEECCCC--CC--Cc----ccEEEEEEEeCCCCCcEEeEEc--------C--C-------CcCEEEEcCCCC
Confidence 457899999975321 21 11 1234688887644333322100 0 1 112577999999
Q ss_pred CCEEEEEEeeCCCCCCC--ceeEEEcCCCC
Q 009637 165 NNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (530)
Q Consensus 165 ~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 192 (530)
++.|.+||.+.+.-+.| ....|+|.+.+
T Consensus 74 ~t~Y~frV~A~N~~G~s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 74 TMGYEVQITAANRLGYSEPTVYEFSMPPKP 103 (114)
T ss_dssp TCCEEEEEEEECTTSCEEEEEEEECCCCCC
T ss_pred CCEEEEEEEEEeCCcCcCCcCCEEEcCCCC
Confidence 99999999875433443 35678886543
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.1 Score=42.13 Aligned_cols=88 Identities=20% Similarity=0.259 Sum_probs=52.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC-cceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+.+.-. ..+++.|+|.... +. ....=.|+|...... .+..+ . ...
T Consensus 10 ~P~~~~~~~~-~~~sv~l~W~~~~---~~-------~i~~Y~v~~~~~~~~~~~~~~-------------~------~~~ 59 (106)
T 2dju_A 10 PPIDLVVTET-TATSVTLTWDSGN---SE-------PVTYYGIQYRAAGTEGPFQEV-------------D------GVA 59 (106)
T ss_dssp CCEEEEEEEE-ETTEEEEEEECCC---SS-------CCSEEEEEEEETTCCSCCCCB-------------C------CCC
T ss_pred CCCCcEEEec-cCCEEEEEEcCCC---CC-------CceEEEEEEEECCCCCCeEEc-------------c------CCC
Confidence 5777766543 3689999998642 10 012234666554322 11110 0 001
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.|||...+. ..+|+...++|.+..
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 60 TTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp SSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred ccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 234678999999999999975432 257788889987653
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.015 Score=58.93 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=25.1
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
.++.++||+|..... ..+++.+.....+-++++||+++
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VD 95 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 95 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSS
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCC
Confidence 368999999975321 22333333345678999999995
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.08 Score=43.42 Aligned_cols=37 Identities=30% Similarity=0.296 Sum_probs=26.8
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 192 (530)
.+.|+||+|+|.|.++|...+..+.|. ...++|.|.+
T Consensus 62 ~~~l~~L~p~t~Y~~~V~A~~~~~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 62 EVLLDGLEPGRDYEVSVQSLRGPEGSEARGIRARTPTSG 100 (104)
T ss_dssp EEEEESCCTTCCEEEEEEEECSSSBCCCEEEECCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEcCCCC
Confidence 788999999999999998654334443 4456676554
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.36 E-value=0.061 Score=44.29 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=30.5
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 193 (530)
.+.|+||+|+|.|.+||...+. +.+|+...|+|.+...
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 65 RAELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp EEEEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred EEEECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 6788999999999999975432 3688889999987643
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.12 Score=43.15 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=52.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+... +.+++.|+|.......+ -++ ...=.|+|........... . ....
T Consensus 31 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~-----~g~-i~~Y~v~~~~~~~~~~~~~------~-------------~~~~ 84 (124)
T 2ed9_A 31 PPQNVSLEVV-NSRSIKVSWLPPPSGTQ-----NGF-ITGYKIRHRKTTRRGEMET------L-------------EPNN 84 (124)
T ss_dssp CCBSCCEEEE-ETTEEEEECBCCCTTTC-----CSC-CCEEEEEEEESSSSCCEEE------E-------------CSSC
T ss_pred CCeeeEEEEc-CCCEEEEEEECcCCcCC-----CcE-EeEEEEEEEECCCCcceEE------e-------------cCCc
Confidence 5777766443 36899999976432100 000 1223466665543322110 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
..+.|++|+|+|.|.+||..-+. +.+|+...|+|..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 85 LWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 46788999999999999975332 3578888898864
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.24 Score=40.17 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=47.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-- +.+++.|+|.-.... ...=.|+|........... ... ..-.
T Consensus 4 ~P~~l~~~~~-~~~sv~lsW~pP~~~-----------i~~Y~v~y~~~~~~~~~~~----~~~-------------~~~~ 54 (100)
T 3b83_A 4 PPFNIKVTNI-TLTTAVVTWQPPILP-----------IEGILVTFGRKNDPSDETT----VDL-------------TSSI 54 (100)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEESSCTTTCEE----EEE-------------CTTE
T ss_pred cCCccEEEEe-cCCEEEEEEcCCccc-----------CCEEEEEEEECCCCCCceE----EEE-------------CCcc
Confidence 5888877643 478999999754211 1234577765442211110 000 1124
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCce
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDV 183 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~ 183 (530)
..+.|+||+|+|.|.+||...+..+.|+.
T Consensus 55 t~~~i~~L~p~t~Y~~~V~A~n~~g~s~p 83 (100)
T 3b83_A 55 TSLTLTNLEPNTTYEIRIVARNGQQYSPP 83 (100)
T ss_dssp EEEEECSCCTTCEEEEEEEEEETTEECCC
T ss_pred eEEEECCCCCCCEEEEEEEEEeCCCCCCC
Confidence 57889999999999999986554455543
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.019 Score=58.46 Aligned_cols=24 Identities=21% Similarity=0.480 Sum_probs=19.9
Q ss_pred HHHHHHHHHcCCcEEEEccccCce
Q 009637 390 VEMEALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 390 ~~l~~ll~k~~VdlvlsGH~H~ye 413 (530)
+.+..++..++.++++.||+|.-+
T Consensus 268 ~~~~~fl~~~~~~~IV~GHt~~~~ 291 (342)
T 2z72_A 268 AELDTILQHFNVNHIVVGHTSQER 291 (342)
T ss_dssp HHHHHHHHHHTCSEEEECSSCCSS
T ss_pred HHHHHHHHHCCCcEEEECCCcccc
Confidence 456778888899999999999754
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.05 Score=44.93 Aligned_cols=88 Identities=22% Similarity=0.297 Sum_probs=52.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.-. +.+++.|+|..... | ....=.|+|............ ..-.
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~~~-------------------~~~~ 69 (115)
T 1x5z_A 20 QPLNFKAEPE-SETSILLSWTPPRS--D--------TIANYELVYKDGEHGEEQRIT-------------------IEPG 69 (115)
T ss_dssp CCEEEEEECS-SSSEEEEEEECCSC--C--------CCCEEEECBEESSSCCCBCCE-------------------ECSS
T ss_pred CCccCEeeeC-CCCEEEEEEcCCCC--C--------CccEEEEEEEeCCCCCceEEe-------------------cCCC
Confidence 5777777433 37899999986431 1 011234555443322111000 0011
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 70 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 367889999999999999754322 57888899998654
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.11 Score=43.77 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=29.7
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||..-+ .+.+|+...++|.+..
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 3567899999999999996432 2368899999998654
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=95.00 E-value=0.17 Score=41.42 Aligned_cols=89 Identities=17% Similarity=0.157 Sum_probs=50.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|.++++.- -+.+++.|+|.-.. | + ...=.|+|....... ..... . ++
T Consensus 4 ~~P~~l~v~~-~t~~sv~lsW~~p~---~-------~-i~~Y~v~y~~~~~~~~~~~~~-----v-------------~~ 53 (104)
T 2rb8_A 4 DAPSQIEVKD-VTDTTALITWMPPS---Q-------P-VDGFELTYGIKDVPGDRTTID-----L-------------TE 53 (104)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCS---S-------C-CSEEEEEEEETTCTTCCEEEE-----E-------------ET
T ss_pred CCCCccEEEE-ecCCeEEEEEcCCC---C-------c-cceEEEEEEECcCCCceEEEE-----c-------------CC
Confidence 3588887754 34689999996532 1 0 112356675543111 11110 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCCC--CCceeEEEcCCCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIPA--MSDVYYFRTLPAS 192 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~p~~ 192 (530)
-...+.|+||+|||.|.++|..-+..+ ......|+|.+..
T Consensus 54 ~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 54 DENQYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCC--
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCEEEEEECCCCc
Confidence 123678999999999999996543222 2345668887654
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.2 Score=42.31 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=53.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++... +.+++.|+|......-| + ...=.|+|........... ... .....
T Consensus 30 ~P~~l~~~~~-~~~sv~l~W~~p~~~~g-------~-i~~Y~v~~~~~~~~~~~~~---~~~-------------~~~~~ 84 (130)
T 1wfo_A 30 PPMGILFPEV-RTTSVRLIWQPPAAPNG-------I-ILAYQITHRLNTTTANTAT---VEV-------------LAPSA 84 (130)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSCCCS-------C-CCEEEEEEEESSCCCSCCC---EEE-------------ECTTC
T ss_pred CCCceEEEec-CCCEEEEEEcCCCCCCC-------c-eEEEEEEEEECCCCCceEE---EEE-------------eCCCc
Confidence 5777766554 37899999976432111 0 1123456655432211000 000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||...+.. .+|+...|+|.+..
T Consensus 85 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 85 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRS 125 (130)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCC
T ss_pred eEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCC
Confidence 567889999999999999764432 46677789887653
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.3 Score=44.67 Aligned_cols=95 Identities=21% Similarity=0.217 Sum_probs=52.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-.. .+++.|+|.-.....+... .....=.|+|............. ..-
T Consensus 6 ~~P~~l~~~~~~-~~si~l~W~~p~~~~~~~~----~~i~~Y~v~~~~~~~~~~~~~~~------------------~~~ 62 (211)
T 3p4l_A 6 MPPVGVQASILS-HDTIRITWADNSLPKHQKI----TDSRYYTVRWKTNIPANTKYKNA------------------NAT 62 (211)
T ss_dssp CCCEEEEEEECS-SSCEEEEEECTTSCTTCCC----CSSCEEEEEEEECC---CCCEEE------------------EES
T ss_pred CCCCCEEEEecC-CCeEEEEEeCCCCCccccc----CCCcEEEEEEEECCCCcceEEEe------------------CCC
Confidence 458888775443 7899999986321100000 00122346665543221111100 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 191 (530)
...+.|++|+|+|.|.+||..-+. +.+|....++|.+.
T Consensus 63 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 63 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred ceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 246788999999999999964332 25677888999654
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=94.93 E-value=0.18 Score=41.21 Aligned_cols=89 Identities=15% Similarity=0.136 Sum_probs=50.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCC--ccCCCCCCCCCCCCccEEEEecCCCCc--ceEEEEEEEEeeeccccCCcccc
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEF--QIGDNIKPLDPKTVASFVRYGTSRTNL--NHEATGHSLVYDQLYPFEGLQNY 149 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~--~~g~~~~~~~p~~~~~~V~yg~~~~~~--~~~a~g~~~~y~~~~~~~g~~~~ 149 (530)
..|..+.+..-. .+++.|+|..... .-| ....=.|.|....... .... ... .+
T Consensus 6 ~~P~~~~~~~~s-~tsi~v~W~~p~~~~~ng--------~i~gY~v~y~~~~~~~~~~~~~----~~v------~~---- 62 (102)
T 3n1f_C 6 TGPHIAYTEAVS-DTQIMLKWTYIPSSNNNT--------PIQGFYIYYRPTDSDNDSDYKR----DVV------EG---- 62 (102)
T ss_dssp SCCEEEEEEECS-SSCEEEEEECCC-----C--------CCCEEEEEEEETTCCCGGGCEE----EEE------ET----
T ss_pred CCCceeEEEEcC-CCEEEEEeECCChhhcCC--------ccceEEEEEEECCCCCCCceEE----EEE------cC----
Confidence 468888775433 6899999986432 111 0112357777654321 1110 011 01
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEc
Q 009637 150 TSGIIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRT 188 (530)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T 188 (530)
-..++.|++|+|+|.|.++|..-+ .+..|....++|
T Consensus 63 ---~~~~~~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 63 ---SKQWHMIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp ---TCSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ---CceEEECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 112468999999999999996432 125667777776
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.84 E-value=0.11 Score=43.20 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=55.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccc-cccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQN-YTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~-~~~~~ 153 (530)
.|..+++... +.+++.|+|.......+ -++ ...=.|+|.......... +. ... ...+-
T Consensus 18 ~P~~~~~~~~-~~~sv~l~W~~p~~~~~-----~g~-i~~Y~v~~~~~~~~~~~~-------~~-------~~~~~~~~~ 76 (122)
T 1va9_A 18 PPMDVTLQPV-TSQSIQVTWKAPKKELQ-----NGV-IRGYQIGYRENSPGSNGQ-------YS-------IVEMKATGD 76 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEECCCSSTT-----CSC-CCEEEEEEEESSTTSCCS-------CB-------CCBCCCCSS
T ss_pred CCcceEEEec-cCCEEEEEEeCCCCcCC-----CCc-EeEEEEEEEECCCCCCcc-------eE-------EEEEecCCc
Confidence 5778877543 37899999987542100 000 122345565543221100 00 000 01223
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 191 (530)
...+.|++|+|+|.|.+||..-+. +.+|+...|+|.+.
T Consensus 77 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 77 SEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred eeEEEeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 577889999999999999965332 25788888988764
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.11 Score=44.39 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=27.3
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC--CCCceeEEEcCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP--AMSDVYYFRTLPA 191 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 191 (530)
..+|+||+|+|+|.|||.+.+.. ..|+...++|.+.
T Consensus 81 ~~~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 81 HYTVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred eEEECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 45788999999999999754322 4667888888764
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.027 Score=56.06 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+...+.++++++++++=||.=.
T Consensus 228 ~~~~~~fl~~n~l~~IiR~Hq~v 250 (299)
T 3e7a_A 228 AEVVAKFLHKHDLDLICRAHQVV 250 (299)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCeEEEEcCeee
Confidence 36788899999999999999854
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=94.79 E-value=0.031 Score=56.06 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+...+.++++++++++=||.-.
T Consensus 233 ~~~~~~fl~~n~l~~iiR~Hq~~ 255 (315)
T 3h63_A 233 PDVTKAFLEENNLDYIIRSHEVK 255 (315)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCC
T ss_pred HHHHHHHHHHcCCcEEEEeceee
Confidence 35778899999999999999865
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=94.78 E-value=0.038 Score=55.93 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCcEEEEccccCce
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ye 413 (530)
.+...+.++++++++++=||.-.-+
T Consensus 237 ~~~~~~fl~~n~l~~IiR~Hq~~~~ 261 (335)
T 3icf_A 237 PDITDRFLRNNKLRKIFRSHELRMG 261 (335)
T ss_dssp HHHHHHHHHHTTCSEEEECSSCCTE
T ss_pred HHHHHHHHHHCCCeEEEEcCceecC
Confidence 3578889999999999999987533
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.76 E-value=0.2 Score=45.89 Aligned_cols=95 Identities=17% Similarity=0.160 Sum_probs=55.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+..... ++.|+|......-|.. ...=.|+|.......+.... +... ..+.
T Consensus 10 ~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~-------i~~Y~v~~~~~~~~~~~~~~-----~~~~---------~~~~ 66 (209)
T 2vkw_A 10 SSPSIDQVEPYSS--TAQVQFDEPEATGGVP-------ILKYKAEWRAVGEEVWHSKW-----YDAK---------EASM 66 (209)
T ss_dssp CCCEEEEEEECSS--CEEEEEECCSCCCSSC-------CCEEEEEEEESSCCCCEEEE-----EEHH---------HHHH
T ss_pred cCCcccEeeeccC--eEEEEEcCCCcCCCcc-------eeEEEEEEeeCCCCCceEeE-----eecc---------CCCc
Confidence 3588888766553 6999998753211210 12345667655443332211 1000 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 191 (530)
...+.|++|+|+|.|.|||...+. +.+|....++|.+.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 67 EGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp HSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred cceEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 236788999999999999965332 25677788998764
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.33 Score=43.36 Aligned_cols=76 Identities=17% Similarity=0.230 Sum_probs=44.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.-. ..+++.|+|......-|. ....=.|+|............-.. ..
T Consensus 8 ~P~~l~~~~~-~~~sv~l~W~~p~~~~~~-------~i~~Y~v~~~~~~~~~~~~~~~~~------------------~~ 61 (197)
T 3lpw_A 8 PPQDLKVKEV-TKTSVTLTWDPPLLDGGS-------KIKNYIVEKRESTRKAYSTVATNC------------------HK 61 (197)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCSCCTTS-------CCCEEEEEEEETTCSSCEEEEEEE------------------CS
T ss_pred CCCCcEEEEe-cCCEEEEEEcCCccCCCC-------cccEEEEEEEECCCCccEEeecCC------------------Cc
Confidence 5777776533 368999999875321111 012235667665543332221100 11
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|++|+|+|.|.|||...+
T Consensus 62 ~~~~~~~L~p~t~Y~~~V~a~~ 83 (197)
T 3lpw_A 62 TSWKVDQLQEGCSYYFRVLAEN 83 (197)
T ss_dssp SEEEECCCCTTCEEEEEEEEEE
T ss_pred cEEEEcCCCCCCEEEEEEEEEc
Confidence 3567899999999999996543
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.68 E-value=0.24 Score=41.73 Aligned_cols=39 Identities=21% Similarity=0.061 Sum_probs=29.7
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 192 (530)
...+.|+||+|+|.|.+||..-+ .+.+|....++|.+..
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 119 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDV 119 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCC
Confidence 35678899999999999996432 2357888889997643
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.68 E-value=0.25 Score=41.56 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=51.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecC---CCCcceEEEEEEEEeeeccccCCccccc
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTS---RTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~---~~~~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
..|..+.+.- -..+++.|+|.-.. .-|.. ...=.|+|... ....+..+.-. . .
T Consensus 19 ~~P~~l~~~~-~~~~sv~l~W~p~~-~~~~~-------i~~Y~v~~~~~~~~~~~~w~~~~~~--~------~------- 74 (124)
T 1wis_A 19 GPPTNLGISN-IGPRSVTLQFRPGY-DGKTS-------ISRWLVEAQVGVVGEGEEWLLIHQL--S------N------- 74 (124)
T ss_dssp CCCEEEEEES-CCSSCEEEEEECCC-CCSSC-------CSEEEEEECBSCCSTTSCCEEEEEE--E------S-------
T ss_pred ccCCCCEEEE-ecCCEEEEEEECCC-CCCCc-------ccEEEEEEEECCCCCCCCCeEeeeE--c------c-------
Confidence 3577776643 24689999995432 11110 12345777662 22222221100 0 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCCCC---CCCce-eEEEcCCCC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPAS 192 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~~ 192 (530)
......+.|++|+|+|.|.|||...+.. .+|.. ..++|.+..
T Consensus 75 ~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 75 EPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred CCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 0112367889999999999999765432 34443 457776643
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.63 E-value=0.077 Score=44.34 Aligned_cols=37 Identities=22% Similarity=0.095 Sum_probs=27.9
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
...|++|+|+|.|.|||...+. +.+|+...++|.+.+
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 76 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 5678999999999999975432 256777778886543
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.067 Score=44.40 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=29.5
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 193 (530)
.+.|+||+|+|.|.|||...+. +.+|+...++|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 4567899999999999975442 2578888999987653
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.57 E-value=0.27 Score=40.61 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC--CCCCCceeEEEcCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS--IPAMSDVYYFRTLPASG 193 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~--~~~~S~~~~F~T~p~~~ 193 (530)
..+.|+||+|||.|.++|.... ....+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVLGDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEESSSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEECCcccCCeeEEEEccCCCC
Confidence 3688999999999999987633 22444567788887653
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.035 Score=56.52 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=25.0
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
+++++||+|..... .+.++.......+-++++||+++
T Consensus 71 pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VD 108 (357)
T 3ll8_A 71 PVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 108 (357)
T ss_dssp SEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSS
T ss_pred cceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccC
Confidence 68999999976322 22333322345688999999995
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.48 Score=43.33 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=58.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-.. .+++.|+|..... . ....=.|+|...+........ .. ..-.
T Consensus 25 ~P~~l~~~~~~-~~sv~lsW~~p~~---~-------~i~~Y~v~~~~~~~~~~~~~~----~~-------------~~~~ 76 (203)
T 2gee_A 25 QPTDLSFVDIT-DSSIGLRWTPLNS---S-------TIIGYRITVVAAGEGIPIFED----FV-------------DSSV 76 (203)
T ss_dssp CCEEEEEECCT-TTCEEEEEECCSS---S-------SCCEEEEEEEESSSSSCCEEE----EE-------------ETTC
T ss_pred CCCccEEEecC-CCEEEEEecCCCC---C-------CccEEEEEEEECCCCCCceeE----Ec-------------CCCc
Confidence 57777665433 6899999986431 0 112335666655433221110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEcc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGD 206 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD 206 (530)
..+.|++|+|+|.|.++|..-+..+.|....++|.+.+... ..+++...++
T Consensus 77 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~~~~p~P-~~l~~~~~~~ 127 (203)
T 2gee_A 77 GYYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQTAVPPP-TDLRFTNIGP 127 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEECCCCCC-EEEEEEEEET
T ss_pred cEEEeCCCCCCCEEEEEEEEEeCCCccccEeeeecCCCcCC-CceEEEEcCC
Confidence 36778999999999999976554466776666665433221 2355544444
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.44 E-value=0.12 Score=43.84 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=29.8
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 191 (530)
...+.|++|+|+|.|.+||...+. +.+|+...|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 356788999999999999875432 25788899999764
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.35 E-value=0.054 Score=44.82 Aligned_cols=38 Identities=37% Similarity=0.494 Sum_probs=31.4
Q ss_pred EEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCCC
Q 009637 157 VRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGP 194 (530)
Q Consensus 157 v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~ 194 (530)
+.|+||+|+|.|.+||...+. +.+|+...|+|.+.+++
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 889999999999999975432 36888999999987654
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.34 E-value=0.21 Score=41.32 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=29.0
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 191 (530)
..+.|++|+|+|.|.+||..-+ .+.+|+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4678999999999999996432 235788889999764
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=94.26 E-value=0.42 Score=44.66 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=59.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+.-.. .+++.|+|.-.. | ....=.|+|....+....... . ...
T Consensus 7 ~~P~~l~~~~~~-~~si~l~W~~p~---g--------~i~~Y~v~~~~~~~~~~~~~~-----~-------------~~~ 56 (234)
T 3f7q_A 7 GAPQNPNAKAAG-SRKIHFNWLPPS---G--------KPMGYRVKYWIQGDSESEAHL-----L-------------DSK 56 (234)
T ss_dssp CCCEEEEEEECS-SSCEEEEEECCS---S--------CCCEEEEEEEETTSCGGGCEE-----E-------------EES
T ss_pred CCCcceEEEEcC-CCEEEEEEECCC---C--------ccceEEEEEEECCCCccceEE-----E-------------cCC
Confidence 468888876443 689999998642 1 012335667655432221110 0 001
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCCCCCCCeEEEEEcc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASGPQSYPKRIAIVGD 206 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~~~~~~~rf~v~gD 206 (530)
...+.|++|+|+|.|.++|..-+. +.+|....++|.......-..+++..+++
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 57 VPSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp SSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 236778999999999999964322 24677888998753221111355554444
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.25 E-value=0.16 Score=45.61 Aligned_cols=88 Identities=16% Similarity=0.084 Sum_probs=49.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.- -+.+++.|+|.-.. | + ...=.|+|........... .. .+-
T Consensus 96 ~~P~~l~~~~-~~~~sv~l~W~~p~---~-------~-i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 145 (186)
T 1qr4_A 96 GSPKGISFSD-ITENSATVSWTPPR---S-------R-VDSYRVSYVPITGGTPNVV-----TV-------------DGS 145 (186)
T ss_dssp CCCSCEEEES-CCSSCEEEEECCCS---S-------C-CSEEEEEEEETTCCCCEEE-----EE-------------ETT
T ss_pred CCCCccEEEE-eCCCEEEEEEECCC---C-------c-ccEEEEEEEeCCCCCceEE-----Ec-------------CCC
Confidence 4677776653 24689999997532 1 1 1233566665443211111 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~ 191 (530)
...+.|+||+|+|.|.++|...+..+.| ....|+|.|.
T Consensus 146 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 146 KTRTKLVKLVPGVDYNVNIISVKGFEESEPISGILKTALD 185 (186)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEEC---
T ss_pred cCEEEEcCCCCCCEEEEEEEEEcCCCcCcCEEEEEEecCC
Confidence 2467889999999999999764433444 3556777764
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=94.16 E-value=0.22 Score=40.37 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=46.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+.++- -+.+++.|+|...... ...=.|+|....... .... ... + -
T Consensus 4 ~P~~l~v~~-~t~~Sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~~~------~-------~ 53 (98)
T 3tes_A 4 APKNLVVSE-VTEDSLRLSWTAPDAA-----------FDSFMIQYQESEKVGEAINL-----TVP------G-------S 53 (98)
T ss_dssp CCEEEEEES-CCSSCEEEEEECCTTS-----------CSEEEEEEEETTBCSCCEEE-----EEE------T-------T
T ss_pred CCCceEEEe-cCCCeEEEEecCCcCc-----------cceEEEEEEECCCCCceEEE-----EcC------C-------C
Confidence 477777753 3478999999864311 123356776654211 1111 000 1 1
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCce
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSDV 183 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~ 183 (530)
.-.+.|+||+|+|.|.++|...+..+.|+.
T Consensus 54 ~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~p 83 (98)
T 3tes_A 54 ERSYDLTGLKPGTEYTVSIYGVKGGHRSNP 83 (98)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEEBCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEeCCcccCC
Confidence 236789999999999999976543344443
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.13 E-value=0.2 Score=41.84 Aligned_cols=77 Identities=23% Similarity=0.318 Sum_probs=43.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCC-CCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSR-TNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~-~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+.+.-. ..+++.|+|.-.. .-|. | ...=.|+|.... ...+..+.-. . ...
T Consensus 20 ~P~~~~~~~~-~~~sv~l~W~p~~-~~~~---~----i~~Y~v~~~~~~~~~~w~~~~~~---~-------------~~~ 74 (121)
T 1x4z_A 20 APDRPTISTA-SETSVYVTWIPRG-NGGF---P----IQSFRVEYKKLKKVGDWILATSA---I-------------PPS 74 (121)
T ss_dssp CCCCCEEEEC-CSSEEEEECCCCC-CTTS---C----CCEEEEEEEESSSCCCCEEEEEE---E-------------CTT
T ss_pred cCCCCEEEEc-cCCEEEEEEECCC-CCCC---c----ceEEEEEEEECCCCCceEEeecc---c-------------CCC
Confidence 5666666443 3689999998321 1111 0 123457776654 2223222100 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|++|+|+|+|.|||...+
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n 97 (121)
T 1x4z_A 75 RLSVEITGLEKGISYKFRVRALN 97 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEE
T ss_pred cCEEEECCCCCCCEEEEEEEEEc
Confidence 24677899999999999997544
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.12 E-value=0.29 Score=40.91 Aligned_cols=81 Identities=11% Similarity=0.148 Sum_probs=46.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-. ..+++.|+|.-....-|.. ...=.|+|.......+..+. . .. ..
T Consensus 20 ~P~~l~~~~~-~~~sv~l~W~~p~~~gg~~-------i~~Y~v~~~~~~~~~w~~~~------~-----~~-------~~ 73 (120)
T 2yux_A 20 PPQIVKIEDV-WGENVALTWTPPKDDGNAA-------ITGYTIQKADKKSMEWFTVI------E-----HY-------HR 73 (120)
T ss_dssp CCSCEEEEEE-ETTEEEEEECCCSCCCSSC-------CCCCCEEEEETTTCCCEEEE------S-----SC-------CS
T ss_pred cCCCCEEEEe-cCCEEEEEEcCCCcCCCCC-------ceEEEEEEEECCCCceEEee------e-----cC-------Cc
Confidence 5777766432 3689999997643211110 12235777665443332221 0 00 11
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|++|+|++.|.|||...+..+.|
T Consensus 74 ~~~~v~~L~p~t~Y~frV~A~n~~G~s 100 (120)
T 2yux_A 74 TSATITELVIGNEYYFRVFSENMCGLS 100 (120)
T ss_dssp SCCEECCCCSSEEEEEEECCCSSSCSC
T ss_pred CEEEECCCCCCCEEEEEEEEeeCCcCC
Confidence 245789999999999999876543444
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=94.11 E-value=0.072 Score=56.37 Aligned_cols=26 Identities=19% Similarity=0.149 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCcEEEEccccCceee
Q 009637 390 VEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 390 ~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
+....++.++++++++.||.+..+-.
T Consensus 387 ~~~~~fl~~~~~~~iir~H~~~~~g~ 412 (477)
T 1wao_1 387 DVTKAFLEENNLDYIIRSHEVKAEGY 412 (477)
T ss_dssp HHHHHHHHHTTCCEEEECCSCCTEEE
T ss_pred HHHHHHHHHcCCeEEEECCCCCcCCe
Confidence 46778899999999999999975543
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.10 E-value=0.28 Score=38.48 Aligned_cols=20 Identities=15% Similarity=0.444 Sum_probs=16.9
Q ss_pred EEEeCCCCCCCEEEEEEeeC
Q 009637 156 HVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
...+++|+|+++|+|||..-
T Consensus 52 ~~~~~~L~~~t~Y~~~V~A~ 71 (88)
T 1k85_A 52 TATISGLAADTSYTFTVKAK 71 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEE
Confidence 45679999999999999753
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.06 E-value=0.21 Score=41.97 Aligned_cols=88 Identities=22% Similarity=0.205 Sum_probs=51.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC-c--------ceEEEEEEEEeeeccccCC
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-L--------NHEATGHSLVYDQLYPFEG 145 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~--------~~~a~g~~~~y~~~~~~~g 145 (530)
.|.+++++--. .+++.|+|...... ...=.|+|...... . .... ..
T Consensus 11 ~p~~L~v~~~T-~~Si~LsW~~p~g~-----------v~~Y~i~y~~~~~~~~e~~~~~~~~~~~-----~v-------- 65 (112)
T 2cui_A 11 RLSQLSVTDVT-TSSLRLNWEAPPGA-----------FDSFLLRFGVPSPSTLEPHPRPLLQREL-----MV-------- 65 (112)
T ss_dssp CCCCCEEESCC-SSCEEEECCCCTTS-----------CSEEEEEEECCCCSSSCCCSSCCCCEEE-----EE--------
T ss_pred CCCceEEEeec-CCeEEEEECCCCCC-----------ccEEEEEEEeCCCCccccccccCcceEE-----Ec--------
Confidence 57777775433 68899999753211 12345777765431 0 1110 00
Q ss_pred ccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCCC
Q 009637 146 LQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (530)
Q Consensus 146 ~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 192 (530)
++-...++|+||+|+|.|..+|........| -....+|.+.+
T Consensus 66 -----~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 66 -----PGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp -----ETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEECCCCS
T ss_pred -----CCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCEEEEEEECCCC
Confidence 1112378999999999999999764433333 34556676543
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.05 E-value=0.35 Score=39.79 Aligned_cols=91 Identities=16% Similarity=0.091 Sum_probs=53.0
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+... ++++++.|+|.....-. .+.. ....=.|+|..........+.. . .
T Consensus 9 ~pP~~l~v~~~~~~~~~l~lsW~~P~~w~----~~~~-~~l~Y~v~y~~~~~~~w~~~~~------------~-----~- 65 (109)
T 1uc6_A 9 DPPENVVARPVPSNPRRLEVTWQTPSTWP----DPES-FPLKFFLRYRPLILDQWQHVEL------------S-----N- 65 (109)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCC----CTTT-TTBCEEEEEEESSSCCCCCEEE------------S-----S-
T ss_pred CCCcceEEEEcCCCCCEEEEEECCCCCcc----CCCc-EEEEEEEEEEECCCCCcEEEec------------c-----c-
Confidence 46888888764 34789999998753200 0000 1134567887765432221110 0 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC--CC---CCCceeEEEc
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS--IP---AMSDVYYFRT 188 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~--~~---~~S~~~~F~T 188 (530)
-..+.|.+|+|||.|..||.... .+ .||....++|
T Consensus 66 -~~~~~l~~L~p~t~Y~~~VRa~~~g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 66 -GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp -CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred -CCEEEEeCCCCCCEEEEEEEEEeCCCCCcCcCCCCeeeee
Confidence 12567899999999999997542 12 4555555554
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.02 E-value=0.32 Score=46.15 Aligned_cols=97 Identities=22% Similarity=0.210 Sum_probs=59.5
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCC-CcceEEEEEEEEeeeccccCCccccc
Q 009637 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
....|..+.+.....+.++.|+|.......+. + ....-.|+|..... ..+..+. .
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~-~-----~~L~YEVrYr~~~~~~~W~~v~----~-------------- 167 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKY-V-----KVLMHDVAYRQEKDENKWTHVN----L-------------- 167 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSS-S-----CCEEEEEEEEESSCSSCCEEEE----E--------------
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCc-c-----eeEEEEEEEEeCCCCCceEEEE----e--------------
Confidence 33569999998877677899999985421110 0 01234677877642 2222211 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCCC-------CCCCceeEEEcCCCC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI-------PAMSDVYYFRTLPAS 192 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p~~ 192 (530)
......+.|.+|+|+|.|..||..... +.||....|+|.+..
T Consensus 168 ~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~ 216 (223)
T 3up1_A 168 SSTKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEIN 216 (223)
T ss_dssp SSSEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC
T ss_pred cCceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCC
Confidence 011235668899999999999864321 257778999997643
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.15 Score=41.72 Aligned_cols=22 Identities=18% Similarity=0.354 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|++|+|+++|.|||...+
T Consensus 65 ~~~~v~~L~p~t~Y~frV~A~n 86 (110)
T 2yuw_A 65 TKFTITGLPTDAKIFVRVKAVN 86 (110)
T ss_dssp SEEEECSCCTTCEEEEEEEEEE
T ss_pred CEEEECCCCCCCEEEEEEEEEc
Confidence 3577899999999999997644
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.92 E-value=0.56 Score=38.25 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=50.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+++.--. .+++.|+|.-.... ...=.|+|...... .... .. .+-
T Consensus 9 ~~P~~l~v~~~~-~~sv~lsW~~p~~~-----------i~~Y~i~y~~~~~~-~~~~-----~~-------------~~~ 57 (105)
T 2cum_A 9 EAPRDLEAKEVT-PRTALLTWTEPPVR-----------PAGYLLSFHTPGGQ-TQEI-----LL-------------PGG 57 (105)
T ss_dssp CCCEEEEEESCC-SSCEEEEEECCSSC-----------CSEEEEEEECTTSC-EEEE-----EE-------------CSS
T ss_pred CCCCceEEEecc-CCEEEEEEcCCCCc-----------cceEEEEEEeCCCc-eEEE-----EE-------------CCC
Confidence 357777765433 68899999753211 12235667654321 1100 00 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCC--CceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAM--SDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~--S~~~~F~T~p~ 191 (530)
...+.|+||+|+|.|.++|..-+..+. +....|+|...
T Consensus 58 ~ts~~l~~L~p~t~Y~~~V~A~~~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 58 ITSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECCCS
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEEEeCCc
Confidence 246789999999999999976432233 34567888643
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.87 E-value=0.57 Score=37.75 Aligned_cols=86 Identities=14% Similarity=0.226 Sum_probs=48.3
Q ss_pred CceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEE
Q 009637 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIH 155 (530)
Q Consensus 76 P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h 155 (530)
|. +.|... +.+++.|+|......-| ....=.|+|........... .. .....
T Consensus 11 p~-~~v~~~-~~~sv~l~W~~p~~~~g--------~i~~Y~v~~~~~~~~~~~~~-----~~-------------~~~~~ 62 (107)
T 2dn7_A 11 PT-MMISTT-AMNTALLQWHPPKELPG--------ELLGYRLQYCRADEARPNTI-----DF-------------GKDDQ 62 (107)
T ss_dssp CE-EEEEEC-STTEEEEEEECCSSCSS--------CCCEEEEEEEETTCSSCEEE-----EE-------------ETTCC
T ss_pred Cc-EeEEec-CCCEEEEEECCCCCCCC--------ceeEEEEEEEECCCCCCEEE-----Ee-------------CCCcc
Confidence 44 455444 57899999987432111 01233567765543322221 00 01123
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCCC---CCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIPA---MSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~~---~S~~~~F~T~p 190 (530)
.+.|++|+|+|.|.+||..-+..+ +|. ..|+|..
T Consensus 63 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 63 HFTVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 677899999999999997544322 344 4577754
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.87 E-value=0.17 Score=41.53 Aligned_cols=78 Identities=10% Similarity=0.084 Sum_probs=43.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-. +.+++.|+|.-....-|.. ...=.|+|.......+..+. . ....
T Consensus 10 ~~P~~l~~~~~-~~~sv~l~W~~p~~~~~~~-------i~~Y~v~~~~~~~~~w~~~~-------~----------~~~~ 64 (111)
T 1x5y_A 10 SAPQHLTVEDV-TDTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN-------K----------EPVE 64 (111)
T ss_dssp CCCEEEEEEEE-CSSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS-------S----------SCBS
T ss_pred cCCCCCEEEec-cCCEEEEEECCCCcCCCCc-------ccEEEEEEEECCCCceEEcc-------c----------cCCc
Confidence 35777766543 3689999998643211100 12234556544332221110 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|++|+|+|.|.|||...+
T Consensus 65 ~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 65 RCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEc
Confidence 23567899999999999997644
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.87 E-value=0.25 Score=40.87 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=28.5
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
.+.|++|+|+|.|.|||...+. ..+|+...|+|.+..
T Consensus 74 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 74 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 4678999999999999965332 357788889987653
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.87 E-value=0.16 Score=42.77 Aligned_cols=38 Identities=24% Similarity=0.339 Sum_probs=29.3
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|++|+|+|+|.+||...+. +.+|+...|+|.|..
T Consensus 67 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~ 107 (122)
T 2e3v_A 67 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVR 107 (122)
T ss_dssp TEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCC
T ss_pred ceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCC
Confidence 36788999999999999975332 257788888887753
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.84 E-value=0.33 Score=38.49 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.--. .+++.|+|.-.. | + ...=.|+|..... +....... ..+-.
T Consensus 4 ~P~~l~~~~~~-~~si~lsW~~p~---~-------~-i~~Y~v~y~~~~~-------~~~~~~~~----------~~~~~ 54 (94)
T 1j8k_A 4 RPKGLAFTDVD-VDSIKIAWESPQ---G-------Q-VSRYRVTYSSPED-------GIHELFPA----------PDGEE 54 (94)
T ss_dssp CCCCCEEEEEE-TTEEEEECCCCS---S-------C-CSCEEEEEEETTT-------EEEEECCC----------CCSSC
T ss_pred CCCccEEEeec-CCEEEEEEcCCC---C-------C-cceEEEEEEeCCC-------CCceEEec----------CCCCc
Confidence 47777765433 589999995432 1 0 1223566665432 11000000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 189 (530)
..+.|+||+|+|.|.++|..-+..+.|. ...++|.
T Consensus 55 ~~~~l~~L~p~t~Y~~~V~A~~~~g~s~p~~~~~~T~ 91 (94)
T 1j8k_A 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEECC
T ss_pred cEEEeCCCCCCCEEEEEEEEEcCCCcCCCEEeEEEec
Confidence 5788999999999999998755334443 3445554
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.79 E-value=0.25 Score=41.04 Aligned_cols=86 Identities=14% Similarity=0.028 Sum_probs=49.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.--. .+++.|+|.-.... ...=.|+|........ .. .. .+-.
T Consensus 10 ~P~~l~~~~~t-~~sv~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~-~~-----~v-------------~~~~ 58 (115)
T 2cuh_A 10 GPTQLRALNLT-EGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPL-QA-----ET-------------PGSA 58 (115)
T ss_dssp SCEEEECCCCS-SSCEEEEEECCSSC-----------CSEEEEEEECSSSCCE-EE-----EE-------------ETTC
T ss_pred CCcceEEEecc-CCeEEEEEECCCCC-----------ccEEEEEEEcCCCCcE-EE-----EE-------------CCCc
Confidence 57776664333 68999999753211 1223467765432111 00 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC--CCCceeEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP--AMSDVYYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p~ 191 (530)
..+.|+||+|+|.|.++|..-+.. .......|+|.+.
T Consensus 59 t~~~l~~L~P~t~Y~~~V~A~~~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 59 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLE 97 (115)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCC
T ss_pred cEEEEeCCCCCCEEEEEEEEEeCCCcCCCEEEEEEeCCC
Confidence 367899999999999999754322 2234567888754
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=93.74 E-value=0.058 Score=57.40 Aligned_cols=23 Identities=9% Similarity=0.033 Sum_probs=20.0
Q ss_pred HHHHHHHHHcCCcEEEEccccCc
Q 009637 390 VEMEALLYSYGVDIVFNGHVHAY 412 (530)
Q Consensus 390 ~~l~~ll~k~~VdlvlsGH~H~y 412 (530)
+.+.+.+.++++++++-||.-..
T Consensus 263 d~v~~FL~~n~l~lIIRaHq~v~ 285 (521)
T 1aui_A 263 PAVCEFLQHNNLLSILRAHEAQD 285 (521)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCT
T ss_pred HHHHHHHHHcCCcEEEEccchhc
Confidence 57888999999999999998753
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=93.60 E-value=0.21 Score=41.24 Aligned_cols=87 Identities=17% Similarity=0.160 Sum_probs=46.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+..+.....+++.++|.-... .....-|.........+..++. .. ..
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~~-------------~~~Y~VyR~~~~~~~~~~i~~~--~~-------------~t 57 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAPG-------------ANSYNVKRSTKSGGPYTTIATN--IT-------------ST 57 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCTT-------------CSEEEEEEESSTTCCCEEEEEE--EC-------------SS
T ss_pred CCCceeEEEEeCCCCEEEEEEECCCC-------------CCEEEEEEecCCCCCcEEEeec--CC-------------CC
Confidence 46888877664445789999987321 1234444433211111111110 00 00
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
....++|++|++|+|+|..-+. ...|...+.++..
T Consensus 58 --sy~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~~ 95 (103)
T 3mpc_A 58 --NYTDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYPK 95 (103)
T ss_dssp --EEEETTCCTTCCCEEEEEEEETTEECCCCCCEECBCCC
T ss_pred --EEEECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECCc
Confidence 2234799999999999975332 2455555555543
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.51 E-value=0.16 Score=42.35 Aligned_cols=38 Identities=29% Similarity=0.227 Sum_probs=29.2
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|.+||..-+. +.+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCC
Confidence 46788999999999999965332 257788889997643
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.43 E-value=0.31 Score=40.69 Aligned_cols=24 Identities=13% Similarity=0.311 Sum_probs=19.6
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIPA 179 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~~ 179 (530)
.+.|+||+|+|.|.|||...+..+
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTS
T ss_pred EEEECCCCCCCEEEEEEEEEECCC
Confidence 467899999999999998765434
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.11 E-value=0.53 Score=43.21 Aligned_cols=93 Identities=13% Similarity=0.065 Sum_probs=55.8
Q ss_pred CCCCceeEEeecC-----CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEe-cCCCCcceEEEEEEEEeeeccccCCc
Q 009637 73 GFEPEQLSVSLSF-----NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYG-TSRTNLNHEATGHSLVYDQLYPFEGL 146 (530)
Q Consensus 73 ~~~P~qi~l~~~~-----~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~~~~g~ 146 (530)
...|..+.+.... ..+++.|+|..... .|. ....=.|+|. ...+..+..+. ..
T Consensus 109 p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~----~~--------- 167 (215)
T 1cd9_B 109 LEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-SEY-------MEQECELRYQPQLKGANWTLVF----HL--------- 167 (215)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSTTCCCEEEE----EE---------
T ss_pred eCCCcEEEEEEeccccCCCCCeEEEEEeCCCC-CCe-------EEEEEEEEEccCCCCCCcEEEe----cc---------
Confidence 3568877766542 47889999986532 110 0023467787 54443332221 00
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEeeCC---C---CCCCceeEEEcCC
Q 009637 147 QNYTSGIIHHVRLTGLEPNNKYYYQCGDPS---I---PAMSDVYYFRTLP 190 (530)
Q Consensus 147 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~p 190 (530)
.+.-..+.|.+|+|+|.|.+||.... . +.||+...|+|..
T Consensus 168 ----~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 ----PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ----ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred ----cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 01135678999999999999986432 1 2478888998864
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=93.08 E-value=0.25 Score=45.26 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=54.4
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+... .+.+++.|+|......-|. ...=.|+|.......+..+. .. + ...
T Consensus 105 ~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~--------i~~Y~v~y~~~~~~~~~~~~----------~~----~-~~~ 161 (215)
T 1bqu_A 105 NPPHNLSVINSEELSSILKLTWTNPSIKSVI--------ILKYNIQYRTKDASTWSQIP----------PE----D-TAS 161 (215)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGTS--------CEEEEEEEEETTCSSCEECC----------GG----G-GCS
T ss_pred CCCCceEEEEecCCCceEEEEEeCCCCCCcc--------eEEEEEEEccCCCCCceEec----------cc----c-ccC
Confidence 46888877653 3578999999864321110 11234566554422221110 00 0 011
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC---C---CCCCceeEEEcCCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS---I---PAMSDVYYFRTLPA 191 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~---~---~~~S~~~~F~T~p~ 191 (530)
....+.|++|+|+|.|.+||...+ . ..||+...++|.+.
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 162 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred ccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 234678899999999999997532 1 13777888888753
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.06 E-value=0.29 Score=40.32 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=24.9
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC---CCCceeE-EEcCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYY-FRTLPA 191 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~-F~T~p~ 191 (530)
.+.|++|+|+|.|.|||...+.. .+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 56789999999999999764422 2344433 677654
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=92.95 E-value=0.94 Score=41.40 Aligned_cols=94 Identities=17% Similarity=0.208 Sum_probs=56.3
Q ss_pred CCCCceeEEeecC---CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccc
Q 009637 73 GFEPEQLSVSLSF---NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNY 149 (530)
Q Consensus 73 ~~~P~qi~l~~~~---~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~ 149 (530)
...|..+.+.... .++++.|+|......... .+-....=.|+|....+..+... ..
T Consensus 103 p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~----~g~~~~~Y~v~y~~~~~~~~~~~------~~----------- 161 (210)
T 3n06_B 103 PDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLK----TGWFTLLYEIRLKPEKAAEWEIH------FA----------- 161 (210)
T ss_dssp CCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCT----TSSCCEEEEEEEECTTCSSCEEE------EE-----------
T ss_pred cCCCceEEEEEecCcCCCceEEEEcCCCCCcccc----CCeEEEEEEEEEecCCCCCCEEE------ec-----------
Confidence 4578888887653 468999999874321000 00001234577776554322211 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEeeCC---C-CCCCceeEEEcC
Q 009637 150 TSGIIHHVRLTGLEPNNKYYYQCGDPS---I-PAMSDVYYFRTL 189 (530)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~-~~~S~~~~F~T~ 189 (530)
+....+.|.+|+|+|.|..||.... . +.||+...|+|+
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp 203 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 203 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECc
Confidence 0113577899999999999986432 1 368888999995
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=92.68 E-value=0.49 Score=47.10 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=54.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-..+.+++.|+|..... + ....=.|+|....+....... ..+ .+.
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~--------~i~~Y~v~~~~~~~~~~~~~~---~~~-------------~~~ 56 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HAD 56 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSC--S--------SCCEEEEEEEETTTCSSCCEE---EEE-------------CTT
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCC--C--------CceEEEEEEEECCCCCCceeE---EEe-------------cCC
Confidence 46888888765534579999987431 1 112345667655432211110 001 112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.|||...+..+.|...+..+.+.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~ 95 (368)
T 1fnf_A 57 QSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAV 95 (368)
T ss_dssp CCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCC
T ss_pred cCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCC
Confidence 246789999999999999976544456665566655543
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.63 E-value=0.76 Score=40.97 Aligned_cols=88 Identities=16% Similarity=0.100 Sum_probs=51.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++++.-. ..+++.|+|.-.... ...=.|+|...... ... ... .+ -
T Consensus 8 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~-~~~-----~~~------~~-------~ 56 (186)
T 1qr4_A 8 DNPKDLEVSDP-TETTLSLRWRRPVAK-----------FDRYRLTYVSPSGK-KNE-----MEI------PV-------D 56 (186)
T ss_dssp CCCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECTTCC-EEE-----EEE------CT-------T
T ss_pred cCCCceEEEec-CCCEEEEEEeCCCCC-----------ccEEEEEEEeCCCC-eeE-----EEC------CC-------C
Confidence 46888877643 368999999864211 12345667643221 110 010 01 1
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.++|...+..+.|. ...++|.|.+
T Consensus 57 ~~~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 57 STSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp CSEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEECCCCC
T ss_pred CCEEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEECCCCC
Confidence 23567899999999999997654344444 4667776543
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.62 E-value=0.065 Score=47.01 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=30.1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|..||..-+. +..|+...|+|.+..
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~~ 122 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCCC
Confidence 46889999999999999964321 257888899998754
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=92.45 E-value=0.82 Score=41.62 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=27.4
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
...|+||+|+|.|.|||..-+. +.+|+...++|..
T Consensus 175 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 175 SFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 5678999999999999975332 3577888888863
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.42 E-value=1.4 Score=42.02 Aligned_cols=103 Identities=20% Similarity=0.133 Sum_probs=56.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+... +.+++.|+|.-.... ...=.|+|............ .. + + .+-
T Consensus 106 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~~-----~~------~--~--~~~ 158 (283)
T 1tdq_A 106 DAPKNLRVGSR-TATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVL-----VP------K--G--IGP 158 (283)
T ss_dssp CCCEEEEEEEE-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE------C--C--SSS
T ss_pred CCCCceEEEec-CCCeEEEEecCCCCC-----------ccEEEEEEEeCCCCcceEEE-----CC------C--C--Ccc
Confidence 46777776443 368999999864311 12345667655432221110 00 0 0 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCce--eEEEcCCCCCCCCCCeEEEEEcc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSDV--YYFRTLPASGPQSYPKRIAIVGD 206 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T~p~~~~~~~~~rf~v~gD 206 (530)
...+.|++|+|+|.|.++|...+..+.|.. ..+.|.|.+. ..+++..+++
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P---~~l~~~~~~~ 210 (283)
T 1tdq_A 159 TTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSP---RDLMVTASSE 210 (283)
T ss_dssp EEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCC---EEEEEEEECS
T ss_pred cceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCC---CccEEeEecC
Confidence 567889999999999999976443344543 4455544321 1355554444
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=92.39 E-value=0.38 Score=46.89 Aligned_cols=95 Identities=17% Similarity=0.129 Sum_probs=55.6
Q ss_pred CCCCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 73 GFEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 73 ~~~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
...|..+.+... .+++++.|+|......-| + ...=.|+|.......+..+. .. + ..
T Consensus 200 p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~-------~-i~~Y~v~y~~~~~~~w~~~~----------~~----~-~~ 256 (303)
T 1i1r_A 200 PNPPHNLSVINSEELSSILKLTWTNPSIKSV-------I-ILKYNIQYRTKDASTWSQIP----------PE----D-TA 256 (303)
T ss_dssp CCCCEEEEEECCSSSSSCEEEEEECCGGGGT-------S-CEEEEEEEEETTCSSCEECC----------GG----G-GC
T ss_pred cCCCcceEEEEecCCCCEEEEEECCCCCCCc-------c-cEEEEEEEEeCCCCCceEEc----------cc----c-CC
Confidence 356888877643 357899999987542111 0 01234666655432221110 00 0 01
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCC------CCCCceeEEEcCC
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLP 190 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 190 (530)
.....+.|++|+|+|.|.+||...+. ..||+...|+|+.
T Consensus 257 ~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 257 STRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 12246788999999999999964321 2567888899864
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=92.29 E-value=0.73 Score=37.25 Aligned_cols=74 Identities=20% Similarity=0.236 Sum_probs=43.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC-cceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+++.-- +.+++.|+|..... -| ....=.|+|...... ..... .. + +-
T Consensus 7 ~P~~l~v~~~-t~~Sv~l~W~~p~~-~~--------~i~~Y~v~y~~~~~~~~~~~~-----~v----~---------~~ 58 (101)
T 3k2m_C 7 VPTKLEVVAA-TPTSLLISWDAPMS-SS--------SVYYYRITYGETGGNSPVQEF-----TV----P---------YS 58 (101)
T ss_dssp SSCEEEEEEE-ETTEEEEEECCCCT-TS--------CCCEEEEEEEETTCSSCCEEE-----EE----E---------TT
T ss_pred CCcceEEeec-CCCEEEEEecCCCC-CC--------ceeeEEEEEEECCCCCccEEE-----Ec----C---------CC
Confidence 5888877543 36899999976321 01 011234667654332 11111 00 0 11
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|+||+|+|.|.++|..-+
T Consensus 59 ~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 59 SSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred ccEEEECCCCCCCEEEEEEEEEe
Confidence 24788999999999999997544
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=92.26 E-value=0.65 Score=42.37 Aligned_cols=94 Identities=18% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+.... +.+++.|+|.-....-| + ...=.|+|............ .... .+
T Consensus 107 ~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~--~~~~-------------~~ 163 (211)
T 3p4l_A 107 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-------K-ITGYIIYYSTDVNAEIHDWV--IEPV-------------VG 163 (211)
T ss_dssp SCCEEEEEEEETTEEEEEEEEEECCTTCCS-------C-CCEEEEEEESCTTSCGGGSE--EEEE-------------ES
T ss_pred CCCcceEEEecCCCCCEEEEEECCCCCCCC-------C-EEEEEEEEEECCCCCCCceE--EEEe-------------cC
Confidence 468888877664 36899999986432111 0 11234666654432211000 0000 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLP 190 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 190 (530)
-...+.|++|+|+|.|.+||..-+ .+.+|+...|+|..
T Consensus 164 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 164 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp SCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 123678899999999999996432 23678888888764
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=92.25 E-value=0.89 Score=38.48 Aligned_cols=38 Identities=18% Similarity=0.042 Sum_probs=29.8
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|.++|..-+ .+..|+...|+|....
T Consensus 75 ~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v 115 (120)
T 1ujt_A 75 RSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEES 115 (120)
T ss_dssp CEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSC
T ss_pred CEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCC
Confidence 5788999999999999996432 2367888999997643
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=92.13 E-value=1.2 Score=42.74 Aligned_cols=90 Identities=17% Similarity=0.056 Sum_probs=52.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-.. .+++.|+|...... ...=.|+|............ .. ..-
T Consensus 22 ~~P~~l~~~~~~-~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~----~~-------------~~~ 72 (290)
T 3r8q_A 22 PAPTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI----NL-------------APD 72 (290)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSSC-----------CCEEEEEEEESSSSSCCEEE----EE-------------CTT
T ss_pred CCCCceEEEECC-CCEEEEEEeCCCCC-----------eeEEEEEEEeCCCCCceEEE----Ec-------------CCC
Confidence 468888775543 78999999874211 12345667655422211110 00 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 192 (530)
...+.|++|+|+|.|.++|..-+..+.| ....++|.+.+
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~ 113 (290)
T 3r8q_A 73 SSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENV 113 (290)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCC
Confidence 3467889999999999999754322222 24567776544
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.12 E-value=0.96 Score=37.13 Aligned_cols=22 Identities=27% Similarity=0.465 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|++|+|+|.|.+||...+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred CEEEeCCCCCCCEEEEEEEEEc
Confidence 4677899999999999997644
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=92.02 E-value=0.68 Score=43.30 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=56.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+++...+ .+++.|+|........ ++ ....=.|+|...... +..+.. ... ...
T Consensus 107 ~pP~~l~~~~~~-~~~l~lsW~~p~~~~~-----~~-~~l~Yevry~~~~~~-w~~~~~--~~~-------------~~~ 163 (214)
T 2b5i_B 107 MAPISLQVVHVE-THRCNISWEISQASHY-----FE-RHLEFEARTLSPGHT-WEEAPL--LTL-------------KQK 163 (214)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCSCCGG-----GT-TCEEEEEEEECTTSC-STTSCC--EEE-------------CSC
T ss_pred CCCceEEEEEec-CCeEEEEECCCCcccc-----CC-CceEEEEEEecCCCC-hheeee--eee-------------ccc
Confidence 568888888655 4689999987532100 00 011345777665421 111100 000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC-------CCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI-------PAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~-------~~~S~~~~F~T~p~~ 192 (530)
-+.+.|.+|+|||.|..||..... +.||....|+|.|..
T Consensus 164 ~~~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~~ 209 (214)
T 2b5i_B 164 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPAA 209 (214)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC--
T ss_pred ceEEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCCC
Confidence 347788999999999999864321 368888999998753
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.97 E-value=0.62 Score=38.76 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=53.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.- ..+++.++|.-... |. .| ...=+|+|.. .+..+..+.-. + ++-
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~--~~--~~----I~gY~vey~~-~~~~W~~~~~~---~-------------~~~ 61 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPEL--VP--KR----LDGYVLEGRQ-GSQGWEVLDPA---V-------------AGT 61 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSC--CS--SC----CCBEEEEEEE-TTCCCEEEEEE---E-------------CSS
T ss_pred CCCcceEEEE--eCCEEEEEECCCCC--CC--CC----CcEEEEEEEe-CCCCcEEeeee---c-------------CCC
Confidence 4688887764 35789999987542 11 01 1234678877 33333332211 1 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
..+..|.+|+|+++|.+||.+-+.. ..|+...++|....
T Consensus 62 ~t~~~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~~ 103 (108)
T 1v5j_A 62 ETELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp CCEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred cCEEEeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCcc
Confidence 2356789999999999999654322 35556666665443
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=91.91 E-value=0.77 Score=42.94 Aligned_cols=93 Identities=12% Similarity=0.099 Sum_probs=56.2
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
....|..|++......+++.|+|...... +.. ....=.|+|....+..+.... .. .+
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~------~~~-~~l~Yev~y~~~~~~~w~~~~---~~-------~~------ 177 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPET------PMT-SHIRYEVDVSAGQGAGSVQRV---EI-------LE------ 177 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSC------SCG-GGEEEEEEEECCSSSCCCCEE---EE-------CT------
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCc------ccc-cceEEEEEEEcCCCCCcEEEE---EE-------ec------
Confidence 34578999888754578999999874321 000 012245777655433221100 00 00
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCC--------CCCCceeEEEc
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSI--------PAMSDVYYFRT 188 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~--------~~~S~~~~F~T 188 (530)
-...+.|.+|+|||.|..||..... +.||+...|+|
T Consensus 178 -~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t 221 (227)
T 1eer_B 178 -GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLT 221 (227)
T ss_dssp -TCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC
T ss_pred -CceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEEC
Confidence 1236778999999999999864421 36888888998
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.88 E-value=0.77 Score=44.90 Aligned_cols=94 Identities=14% Similarity=-0.047 Sum_probs=56.4
Q ss_pred CCCCceeEEeecC-----CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEe-cCCCCcceEEEEEEEEeeeccccCCc
Q 009637 73 GFEPEQLSVSLSF-----NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYG-TSRTNLNHEATGHSLVYDQLYPFEGL 146 (530)
Q Consensus 73 ~~~P~qi~l~~~~-----~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg-~~~~~~~~~a~g~~~~y~~~~~~~g~ 146 (530)
...|..+.+.... .++++.|+|..... .|. ....=.|+|. ..+...+..+.- .
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~-~~~-------~~l~Y~v~y~~~~~~~~w~~~~~----~--------- 261 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP-GLH-------INQKCELRHKPQRGEASWALVGP----L--------- 261 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGG-GTT-------SCEEEEEEEEESSSCCCCEEEEE----E---------
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCC-CCc-------eeEEEEEEEccCCCCCCcEEccc----c---------
Confidence 3467777665432 46899999987432 111 0123567887 444433332210 0
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEEeeCC---CC---CCCceeEEEcCCC
Q 009637 147 QNYTSGIIHHVRLTGLEPNNKYYYQCGDPS---IP---AMSDVYYFRTLPA 191 (530)
Q Consensus 147 ~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~~---~~S~~~~F~T~p~ 191 (530)
....+.+.|.+|+|+|.|..||...+ .+ .||+...++|...
T Consensus 262 ----~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 262 ----PLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTER 308 (313)
T ss_dssp ----CSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC-
T ss_pred ----cCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCcc
Confidence 11246788999999999999997432 12 3778888988753
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.77 E-value=0.16 Score=43.31 Aligned_cols=37 Identities=27% Similarity=0.266 Sum_probs=29.3
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
.++|+||+|+|+|.+||...+.. .+|+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 46789999999999999765432 46778899998753
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.75 E-value=1.8 Score=36.32 Aligned_cols=89 Identities=17% Similarity=0.116 Sum_probs=48.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.-.. +++.|+|.-....-| + ...=.|+|.... ..... ... ..-.
T Consensus 30 ~P~~l~~~~~~--~sv~l~W~~P~~~~g-------~-i~~Y~v~y~~~~-~~~~~-----~~~-------------~~~~ 80 (126)
T 1x5i_A 30 VPSSLHVRPLV--TSIVVSWTPPENQNI-------V-VRGYAIGYGIGS-PHAQT-----IKV-------------DYKQ 80 (126)
T ss_dssp SCSEEEEEEET--TEEEEEEECCSCTTB-------C-CCEEEEEECSSC-GGGEE-----EEC-------------CTTC
T ss_pred CCCeeEEEecC--CEEEEEEcCCCCCCC-------C-EeEEEEEEEcCC-CCceE-----EEe-------------CCCe
Confidence 68888776653 899999987532111 0 112345665321 11100 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~ 192 (530)
....|++|+|+|.|.+||..-+..+.+. ...++|.+..
T Consensus 81 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~T~~~~ 120 (126)
T 1x5i_A 81 RYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPHT 120 (126)
T ss_dssp CEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCCT
T ss_pred eEEEEeCCCCCCEEEEEEEEEeCCccCcceeeEEecccCC
Confidence 4678899999999999997544322221 2346665543
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=91.53 E-value=1 Score=44.91 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=59.2
Q ss_pred CCCceeEEeecCCCC-eEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHD-SIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~-~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+.-.. .+ ++.|+|.-... | ....=.|+|............ ... ..
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~--~--------~~~~Y~v~~~~~~~~~~~~~~---~~~-------------~~ 56 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTT--P--------DITGYRITTTPTNGQQGNSLE---EVV-------------HA 56 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSC--S--------SCCEEEEEEEETTCTTSCCEE---EEE-------------ET
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCC--C--------CeeeEEEEEEECCCCCCccee---EEc-------------CC
Confidence 468888877654 55 99999986431 1 112345667665432111110 000 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCCCCCCCCCCeEEEEEcc
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLPASGPQSYPKRIAIVGD 206 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p~~~~~~~~~rf~v~gD 206 (530)
-...+.|++|+|+|.|.++|...+..+.|.....++.+..... ..+++..+++
T Consensus 57 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p~p-~~l~~~~~~~ 109 (375)
T 3t1w_A 57 DQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQL-TDLSFVDITD 109 (375)
T ss_dssp TCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCCCC-SCCEEECCCS
T ss_pred CccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCCCC-ceEEEEecCC
Confidence 1246788999999999999976554466766666664432221 1345444444
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.39 E-value=0.69 Score=41.15 Aligned_cols=80 Identities=14% Similarity=0.283 Sum_probs=45.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-.. .+++.|+|......-|. ....=.|+|...+........ .. -
T Consensus 104 ~~p~~~~~~~~~-~~~v~l~W~~p~~~~~~-------~i~~Y~v~~~~~~~~~~~~~~-~~------------------~ 156 (197)
T 3lpw_A 104 LPPGKITLMDVT-RNSVSLSWEKPEHDGGS-------RILGYIVEMQTKGSDKWATCA-TV------------------K 156 (197)
T ss_dssp CCCSCEEEEEEC-SSCEEEEECCCSCCTTS-------CCCEEEEEEEETTCSCCEEEE-EE------------------S
T ss_pred CCCcccEEEecc-CCeEEEEecCCCcCCCC-------cccEEEEEEEeCCCCceEEee-cc------------------c
Confidence 467777765333 68999999864321110 012235666655433322211 00 1
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAM 180 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~ 180 (530)
...+.|++|+|+|.|.|+|...+..+.
T Consensus 157 ~~~~~~~~L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 157 VTEATITGLIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp SSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred ccEEEeCCcCCCCEEEEEEEEEeCCcc
Confidence 124678999999999999976543333
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=91.28 E-value=0.56 Score=50.45 Aligned_cols=38 Identities=32% Similarity=0.363 Sum_probs=29.2
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|.+||...+. +.+|+...|+|++..
T Consensus 495 ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~~ 535 (536)
T 3fl7_A 495 FSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSPE 535 (536)
T ss_dssp SEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC--
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCCC
Confidence 36789999999999999975432 257889999998753
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.09 E-value=1.3 Score=37.34 Aligned_cols=74 Identities=19% Similarity=0.259 Sum_probs=44.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+.-. +.+++.|+|.-.... ...=.|+|........... . .. ++-
T Consensus 30 ~~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~V~y~~~~~~~~~~~---~-~v-------------~~~ 80 (121)
T 2ocf_D 30 DVPTKLEVVAA-TPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQE---F-TV-------------PGS 80 (121)
T ss_dssp CSCEEEEEEEE-CSSCEEEEEECCSSC-----------CCEEEEEEEETTTCSCBEE---E-EE-------------ETT
T ss_pred CCCCccEEEec-CCCEEEEEEcCCCCC-----------CcEEEEEEEECCCCCccEE---E-Ee-------------CCC
Confidence 46888887653 478999999754211 1223566665443211100 0 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|+||+|+|.|.++|..-+
T Consensus 81 ~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 81 KSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp CCEEEECCCCTTCEEEEEEEEEC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999997654
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=90.72 E-value=1.3 Score=42.53 Aligned_cols=100 Identities=17% Similarity=0.080 Sum_probs=55.2
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.- ...+++.|+|...... ...=.|+|........... .. ...
T Consensus 114 ~~P~~l~~~~-~~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~-----~~-------------~~~ 163 (290)
T 3r8q_A 114 SPPRRARVTD-ATETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPD 163 (290)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSCC-----------CCEEEEEEEESSSCCCEEE-----EE-------------CTT
T ss_pred CCCceeEEEE-cCCCeEEEEEeCCCCc-----------ccEEEEEEEECCCCcceEE-----ec-------------CCC
Confidence 4677777763 3478999999864210 1234566655443221111 00 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCCCCCCCCCeEEEEEcc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPASGPQSYPKRIAIVGD 206 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~~~~~~~~~rf~v~gD 206 (530)
...+.|+||+|+|.|.++|...+..+.|. ...++|.|.+.. .+++..+++
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~---~l~~~~~~~ 215 (290)
T 3r8q_A 164 VRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPS---NLRFLATTP 215 (290)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCE---EEEEEEEET
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCC---ccEEEeeCC
Confidence 23578899999999999997544334443 345566654321 355544443
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.71 E-value=1.2 Score=36.02 Aligned_cols=87 Identities=20% Similarity=0.221 Sum_probs=53.6
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC-cceEEEEEEEEeeeccccCCcccccc
Q 009637 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 74 ~~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
.-|-|+.++-+. .|++-.|.|..... .|+ ..=...|...... .++.+. .+
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~------s~I----~eyiL~~R~k~~~g~Wke~~------------------Ip 57 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQP------SHI----SKYILRWRPKNSVGRWKEAT------------------IP 57 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSS------SCE----EEEEEEEEETTCSSCCEEEE------------------EC
T ss_pred CcceEEEecCCCCCCCccceEEecCCC------CCc----eEEEEEEEEcCCCCceeEEE------------------ec
Confidence 357888886654 37999999998642 110 1122334443321 111110 13
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCCCCCCce--eEEEc
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDV--YYFRT 188 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T 188 (530)
+.+..-+|+||+||.+|.=+|-+...-+|+++ +.|.|
T Consensus 58 ~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 58 GHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp SSCCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred CccceEEEecCCCCcEEEEEEEEeeccCcccceEEEEEe
Confidence 45667789999999999999987655577765 55655
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=90.54 E-value=0.9 Score=41.46 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=18.8
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..++|+||+|+|+|.++|..-+
T Consensus 157 t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 157 STATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp SEEEECSCCTTCEEEEEEEEES
T ss_pred CEEEeCCCCCCCEEEEEEEEEe
Confidence 4678999999999999997643
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.27 E-value=2 Score=35.68 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=19.3
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...++|++|+|+|.|.+||.+.+
T Consensus 70 ~~~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 70 SFTASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEEEECSCCSSEEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEe
Confidence 34688999999999999997544
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.22 E-value=1.1 Score=37.53 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=23.9
Q ss_pred eCCCCCCCEEEEEEeeCCCC---CCCce-eEEEcCCC
Q 009637 159 LTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPA 191 (530)
Q Consensus 159 l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~ 191 (530)
|.+|+|+|.|.|||...+.. .+|.. ..|+|.+.
T Consensus 78 i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 78 QLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 56999999999999754322 45555 47888664
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=90.02 E-value=1.6 Score=36.24 Aligned_cols=71 Identities=24% Similarity=0.355 Sum_probs=43.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+.-. +.+++.|+|...... ...=.|+|....... .... .. ++
T Consensus 5 ~~P~~L~v~~~-t~~Sv~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~ 54 (114)
T 3qwq_B 5 DVPRDLEVVAA-TPTSLLISWDSGRGS-----------YQYYRITYGETGGNSPVQEF-----TV-------------PG 54 (114)
T ss_dssp CCCEEEEEEEE-ETTEEEEEEECCSCC-----------CSEEEEEEEESSCSSCCEEE-----EE-------------ET
T ss_pred CCCCceEEEec-CCCEEEEEEcCCcCc-----------ccEEEEEEEECCCCCccEEE-----Ee-------------CC
Confidence 35788877543 368999999864211 123357776654321 1111 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEee
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGD 174 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~ 174 (530)
-...+.|+||+|+|.|..+|..
T Consensus 55 ~~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 55 PVHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp TCCEEEECSCCTTCEEEEEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEE
Confidence 1236889999999999999864
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.91 E-value=0.67 Score=38.24 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=25.2
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCcee-EEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVY-YFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~-~F~T~p~ 191 (530)
..+.|++|+|+|+|.|||...+.. .+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 457889999999999999764432 344443 4666543
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=89.61 E-value=0.96 Score=36.11 Aligned_cols=71 Identities=21% Similarity=0.297 Sum_probs=42.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+++.-- +.+++.|+|...... ...=.|+|....... .... .. ++-
T Consensus 7 ~P~~l~v~~~-t~~Si~lsW~~p~~~-----------i~~Y~v~y~~~~~~~~~~~~-----~v-------------~~~ 56 (97)
T 3qht_C 7 VPTKLEVVAA-TPTSLLISWDASSSS-----------VSYYRITYGETGGNSPVQEF-----TV-------------PGS 56 (97)
T ss_dssp SSSSCEEEEE-ETTEEEEECCCCCSS-----------CCEEEEEEEESSSCSCCEEE-----EE-------------ETT
T ss_pred CCCceEEEec-CCCEEEEEEeCCCCC-----------CCEEEEEEEECCCCCccEEE-----Ee-------------CCC
Confidence 5788877543 368999999753210 112346676544321 1111 00 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
...+.|+||+|+|.|.++|..-
T Consensus 57 ~t~~~l~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 57 SSTATISGLSPGVDYTITVYAY 78 (97)
T ss_dssp CCEEEECSCCTTCEEEEEEEEE
T ss_pred cCEEEeCCCCCCCEEEEEEEEE
Confidence 2468899999999999999754
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=89.54 E-value=1.6 Score=39.73 Aligned_cols=79 Identities=22% Similarity=0.215 Sum_probs=45.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-.. .+++.|+|.-... | ....=.|+|....+..... .... ++-.
T Consensus 116 ~P~~l~~~~~~-~~sv~l~W~~p~~--~--------~i~~Y~v~~~~~~~~~~~~----~~~~-------------~~~~ 167 (203)
T 2gee_A 116 PPTDLRFTNIG-PDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVA----ELSI-------------SPSD 167 (203)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSS--C--------CCSEEEEEEEETTCGGGCE----EEEE-------------CTTC
T ss_pred CCCceEEEEcC-CCEEEEEEcCCCC--C--------CccEEEEEEEECCCCCccE----EEEc-------------CCCc
Confidence 57887764433 6899999987431 1 1123456676543321111 0000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|+||+|+|.|.++|...+..+.|
T Consensus 168 ~~~~i~~L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 168 NAVVLTNLLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CEEEECCCCCCCEEEEEEEEecCCCcC
Confidence 467889999999999999764433333
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.50 E-value=3 Score=39.55 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=57.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+.-.. .+++.|+|.-.. | + ...=.|+|.......... .... ...
T Consensus 16 ~~P~~l~~~~~~-~~sv~l~W~~~~---~-------~-~~~Y~v~~~~~~~~~~~~----~~~~-------------~~~ 66 (283)
T 1tdq_A 16 DGPTQILVRDVS-DTVAFVEWTPPR---A-------K-VDFILLKYGLVGGEGGKT----TFRL-------------QPP 66 (283)
T ss_dssp CCCEEEEEEEEC-SSCEEEEEECCS---S-------C-CSEEEEEEEESSSSCCCE----EEEE-------------CTT
T ss_pred CCCcEEEEEecC-CCeEEEEEECCC---C-------c-eeEEEEEEEEecCCCCcE----EEEe-------------CCC
Confidence 468888765444 689999998643 1 0 123457775433221110 0011 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCCCCCCCCCeEEEEEccC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPASGPQSYPKRIAIVGDL 207 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~~~~~~~~rf~v~gD~ 207 (530)
...+.|++|+|+|.|.++|...+..+.| ....|+|.|.+. ..+++..+++.
T Consensus 67 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P---~~l~~~~~~~~ 119 (283)
T 1tdq_A 67 LSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAP---KNLRVGSRTAT 119 (283)
T ss_dssp CSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCC---EEEEEEEECSS
T ss_pred CCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCC---CceEEEecCCC
Confidence 2467889999999999999754433333 355677766542 13555554443
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=89.21 E-value=1.9 Score=38.93 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=50.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCC-cceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTN-LNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~-~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+.+.- ..+++.|+|.-.... +.. ...=.|+|...... .+...... . + + .
T Consensus 8 ~P~~~~~~~--~~~sv~l~W~~p~~~-~~~-------i~~Y~v~~~~~~~~~~w~~~~~~---~----~--~-------~ 61 (205)
T 1cfb_A 8 APKLTGITC--QADKAEIHWEQQGDN-RSP-------ILHYTIQFNTSFTPASWDAAYEK---V----P--N-------T 61 (205)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCCCT-TSC-------CCEEEEEEEESSSTTCCEEEEEE---E----E--T-------T
T ss_pred CCCCcEEEe--cCCEEEEEEECcccC-CCc-------eEEEEEEEecCCCCCCceeeeec---c----C--C-------C
Confidence 688888877 689999999864211 110 12335677654322 22221111 0 0 1 0
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCC-ceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMS-DVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S-~~~~F~T~p~ 191 (530)
.....+ +|+|+|.|.|||..-+. +.+| ....++|.+.
T Consensus 62 ~~~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 62 DSSFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp CSEEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred ceEEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 113346 99999999999965332 2455 4567888764
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.97 E-value=0.96 Score=37.52 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=47.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.-.. +++.|+|.-....-| . ...=.|+|..... ..... .. ..-.
T Consensus 20 ~P~~l~~~~~~--~sv~l~W~~P~~~ng-~-------i~gY~i~y~~~~~-~~~~~-----~~-------------~~~~ 70 (116)
T 2edb_A 20 QPSSLHVRPQT--NCIIMSWTPPLNPNI-V-------VRGYIIGYGVGSP-YAETV-----RV-------------DSKQ 70 (116)
T ss_dssp CCSCEEEEECS--SCEEEEECCCSCTTB-C-------CCEEEEEEEESST-TSEEE-----EE-------------ETTC
T ss_pred CCCCeEEEECC--CEEEEEEcCCCCCCC-c-------eeEEEEEEEeCCC-CeEEE-----Ee-------------CCCe
Confidence 57888776553 899999976432111 0 1123466654221 11110 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p 190 (530)
..+.|++|+|+|.|.+||..-+..+.+. ...++|.+
T Consensus 71 ~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~~ 108 (116)
T 2edb_A 71 RYYSIERLESSSHYVISLKAFNNAGEGVPLYESATTRS 108 (116)
T ss_dssp CEEEECSCCSSSBEEEEEEEEETTEECSCEEECCBCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCccCCCCcceeeccc
Confidence 4678899999999999997544323332 33455554
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=88.85 E-value=1.9 Score=35.83 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=26.2
Q ss_pred EEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLPA 191 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p~ 191 (530)
.+.+. |+|+|.|.+||..-+ .+.+|+...|+|...
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 56666 999999999996432 236787888998754
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.56 E-value=1.3 Score=35.91 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=43.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+++.-- +.+++.|+|......-| ....=.|+|........... . .. ++-
T Consensus 9 ~~P~~l~v~~~-t~~Sv~lsW~~p~~~~g--------~i~~Y~v~y~~~~~~~~~~~---~-~v-------------~~~ 62 (103)
T 3t04_D 9 SVPTKLEVVDA-TPTSLKISWDAYYSSWQ--------NVKYYRITYGETGGDSPVQE---F-TV-------------PGY 62 (103)
T ss_dssp CCCCSCEEEEE-ETTEEEEECTTTTTTSC--------CCCEEEEEEEETTCSSCCEE---E-EE-------------ETT
T ss_pred CCCceeEEEec-CCCEEEEEccCCCCCCC--------ccceEEEEEEECCCCCccEE---E-Ec-------------CCC
Confidence 35788877543 37899999976431101 01122466765432111100 0 00 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|+||+|+|.|.++|...+
T Consensus 63 ~ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 63 YSTATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CCEEEECSCCTTCCEEEEEEEES
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24788999999999999997653
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.72 E-value=1.7 Score=39.92 Aligned_cols=78 Identities=18% Similarity=0.164 Sum_probs=43.9
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCC-CcceEEEEEEEEeeeccccCCcccc
Q 009637 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNY 149 (530)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~g~~~~ 149 (530)
+....|..+++.....++++.|+|...... +....=.|+|...+. ..+..+.- +
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~---------~~~l~yev~y~~~~~~~~w~~~~~------------~---- 162 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFP---------ENNLQFQIRYGLSGKEVQWKMYEV------------Y---- 162 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC-----------------CEEEEEEEEESSSSCCCEEEEE------------C----
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCC---------CCcEEEEEEEEECCCCCceEEEec------------c----
Confidence 344578888887765678999999874310 011234577776542 22222110 0
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEee
Q 009637 150 TSGIIHHVRLTGLEPNNKYYYQCGD 174 (530)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Yrvg~ 174 (530)
......+.|.+|+|+|.|..||..
T Consensus 163 -~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 163 -DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp -C---CEEEECCSCTTSCEEEEEEE
T ss_pred -cCcceeEEeecCCCCCEEEEEEEE
Confidence 001236789999999999999864
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=87.70 E-value=1.1 Score=36.86 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=19.2
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...+.|++|+|+|.|.+||...+
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 73 TLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEEEEEEEc
Confidence 34678899999999999997654
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=87.42 E-value=3.7 Score=36.94 Aligned_cols=92 Identities=8% Similarity=0.008 Sum_probs=50.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+... .++++.|+|........ -++ ...=.|+|....... ..... . . ..
T Consensus 106 ~~P~~~~~~~~-~~~sv~l~W~~p~~~~~-----ng~-i~~Y~v~~~~~~~~~~~~~~~----~-------~------~~ 161 (205)
T 1cfb_A 106 KNPDNVVGQGT-EPNNLVISWTPMPEIEH-----NAP-NFHYYVSWKRDIPAAAWENNN----I-------F------DW 161 (205)
T ss_dssp CCCSCCEEECS-STTCEEEECCCCCGGGT-----CSS-SCEEEEEEEESSTTCCCEEEE----E-------C------CT
T ss_pred CCCeeeEeecC-CCCeEEEEEECCCcccc-----CCC-ceEEEEEEEECCCCCCcEEEE----e-------c------CC
Confidence 45777776543 36899999976431000 001 122356666554432 11110 0 0 00
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCC---C-CCceeEEEcC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIP---A-MSDVYYFRTL 189 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~-~S~~~~F~T~ 189 (530)
....+.|++|+|+|.|.+||..-+.. . .|+...++|.
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 162 RQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred CccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 12467889999999999999754322 2 3455666664
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=87.12 E-value=2.6 Score=41.88 Aligned_cols=38 Identities=26% Similarity=0.271 Sum_probs=27.1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||...+..+.| ....|+|.+.+
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVYEFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEEEEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceeeEecCCCCC
Confidence 467889999999999999754433322 24488887764
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=86.70 E-value=2.4 Score=39.93 Aligned_cols=34 Identities=12% Similarity=0.178 Sum_probs=22.0
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC--C-CCCceeEEEcC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI--P-AMSDVYYFRTL 189 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~--~-~~S~~~~F~T~ 189 (530)
..+++||+|+|.|-|||..-+. . .-++...+||.
T Consensus 201 syt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 201 SYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 3567999999999999964321 1 12245556664
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=86.57 E-value=1.7 Score=39.36 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|++|+|+|.|.+||...+
T Consensus 165 ~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 165 DHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp CEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEecCCCCCCEEEEEEEEEe
Confidence 3568899999999999997544
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=86.43 E-value=1.3 Score=47.10 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=56.8
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 73 ~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
...|..+++... .++++.|+|......-|. ...=.|+|.......+... .... +. ..
T Consensus 387 P~PP~nl~v~~~-s~~sl~LsW~pP~~~~g~--------~l~YeV~Yr~~~~~~w~~~----~~~~------~~----~~ 443 (488)
T 2q7n_A 387 PHDPTSLKVKDI-NSTVVTFSWYLPGNFTKI--------NLLCQIEICKANSKKEVRN----ATIR------GA----ED 443 (488)
T ss_dssp CCCCEEEEEEEC-STTCEEEEEEEEEECSSS--------EEEEEEEEBCTTSCCEEEE----EEEE------CC----EE
T ss_pred CCCCeEEEEEec-CCCEEEEEEeCCCCCCCc--------ceEEEEEEEECCCCCceEE----EEEe------cC----CC
Confidence 456888877553 478999999875321110 1223577776543322110 0000 00 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC--C---CCCCceeEEEcCCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS--I---PAMSDVYYFRTLPA 191 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~--~---~~~S~~~~F~T~p~ 191 (530)
..+.+.|.+|+|+|+|..||.... . +.||+...|+|++.
T Consensus 444 ~~~~v~l~~L~P~T~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 444 STYHVAVDKLNPYTAYTFRVRCSSKTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp EEEEEEECSCCSSCCBBCCEEEEESSCSSCCCCCCCCCBCCCCC
T ss_pred cEEEEEeCCCCCCceEEEEEEEEECCCCCCCCCcCCEeEECCCC
Confidence 346779999999999999886432 1 26777888988764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=86.15 E-value=2.4 Score=41.98 Aligned_cols=74 Identities=19% Similarity=0.280 Sum_probs=42.6
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+.-. +.+++.|+|.-.... ...=.|+|....+...... ... ++-
T Consensus 277 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~~~~----~~~-------------~~~ 327 (368)
T 1fnf_A 277 DVPRDLEVVAA-TPTSLLISWDAPAVT-----------VRYYRITYGETGGNSPVQE----FTV-------------PGS 327 (368)
T ss_dssp CSCEEEEEEEE-ETTEEEEEEECCSSC-----------CSEEEEEEEETTCCSCCEE----EEE-------------ETT
T ss_pred CCCCeeEEEec-CCCEEEEEeeCCCCc-----------cceEEEEEEECCCCCccEE----EEc-------------CCC
Confidence 45777766543 368999999764311 1233566665443211110 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
.....|+||+|++.|.|+|..-+
T Consensus 328 ~~~~~~~~L~p~t~Y~~~V~A~~ 350 (368)
T 1fnf_A 328 KSTATISGLKPGVDYTITVYAVT 350 (368)
T ss_dssp CCEEEECSCCTTCCEEEEEEEEC
T ss_pred eeEEEecCCCCCCEEEEEEEEeC
Confidence 24678899999999999997544
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.92 E-value=0.52 Score=38.38 Aligned_cols=74 Identities=18% Similarity=0.250 Sum_probs=42.5
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++++.--. .+++.|+|.-.... ...=.|+|.......... .. . .++-
T Consensus 9 ~~P~~l~v~~~t-~~si~lsW~~p~g~-----------i~~Y~v~y~~~~~~~~~~------~~----------~-v~~~ 59 (105)
T 2ekj_A 9 SPPSNLALASET-PDSLQVSWTPPLGR-----------VLHYWLTYAPASGLGPEK------SV----------S-VPGA 59 (105)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECCSSC-----------CSBBCBBCCCTTSCSCCC------CB----------C-CBTT
T ss_pred CCCCceEEEeCC-CCEEEEEEeCCCCc-----------ceEEEEEEEECCCCCccE------EE----------E-eCCC
Confidence 358888776433 78999999875311 012234554433211000 00 0 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
...++|+||+|+|.|.++|..-+
T Consensus 60 ~~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 60 RSHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp SSEEEECSCCSSCCCBCBBCBBC
T ss_pred cCEEEeCCCCCCCEEEEEEEEEe
Confidence 24678999999999999997544
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=85.43 E-value=0.58 Score=44.88 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=28.0
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC--CCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP--AMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~--~~S~~~~F~T~p 190 (530)
...|+||+|+|.|.++|..-+.. .+|....|+|++
T Consensus 254 ~~~~~~L~p~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 254 EYTLSSLTSDTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 57899999999999999654322 488899999964
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.31 E-value=2.7 Score=37.80 Aligned_cols=88 Identities=17% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCceeEEee-cCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccC
Q 009637 75 EPEQLSVSL-SFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 75 ~P~qi~l~~-~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
.|.++.+.- +..++++.|+|.... |.. ...=.|+|....... .... .. ++
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~---~~~-------i~~Y~v~~~~~~~~~~~~~~-----~~-------------~~ 53 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQ---PSH-------ISKYILRWRPKNSVGRWKEA-----TI-------------PG 53 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCS---STT-------CCEEEEEEEETTCSSCCEEE-----EE-------------CT
T ss_pred CceeEEEEecCCCCCEEEEEEeCCC---CCC-------ceEEEEEEEECCCCCceEEE-----ec-------------CC
Confidence 367776643 223789999998642 111 123456676543311 1111 01 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLP 190 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p 190 (530)
-...+.|+||+|+|.|.+||..-+..+.+ ....|+|..
T Consensus 54 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~~~~~~~~~~t~~ 93 (201)
T 2ha1_A 54 HLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93 (201)
T ss_dssp TCCEEEECSCCTTEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred CccEEEecCCCCCCEEEEEEEEEecccccCceeEEEecCC
Confidence 12367899999999999999865432332 244566643
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=84.54 E-value=6 Score=38.71 Aligned_cols=92 Identities=13% Similarity=0.016 Sum_probs=53.6
Q ss_pred CCCCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 73 GFEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 73 ~~~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
...|..+.+.... +++++.|+|.......+. .+ ...=.|+|.......+..+.- .
T Consensus 197 P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~-----~~-~~~Y~V~yr~~~~~~W~~~~~-----------~------- 252 (325)
T 1n26_A 197 PDPPANITVTAVARNPRWLSVTWQDPHSWNSS-----FY-RLRFELRYRAERSKTFTTWMV-----------K------- 252 (325)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEECCTTCCCS-----SS-CEEEEEEEEETTCSCCEEEEC-----------G-------
T ss_pred CCCCcceEEEEecCCCCEEEEEECCCCccCCC-----cE-eEEEEEEEEeCCCCCCEEEcc-----------c-------
Confidence 3568888877654 468999999875421000 00 022357777664433322210 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCC------CCCCceeEEEc
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRT 188 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T 188 (530)
..-..+.|.+|+|+|.|.+||...+. ..||+...++|
T Consensus 253 ~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 253 DLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp GGCSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred CCceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 01135678999999999999975431 24566666655
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=84.35 E-value=4.6 Score=36.44 Aligned_cols=23 Identities=17% Similarity=0.288 Sum_probs=19.3
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
-...+.|++|+|+|.|.|||..-
T Consensus 68 ~~~~~~i~~L~p~t~Y~~~V~A~ 90 (214)
T 2ibg_A 68 KSFTASVTDLKPQHTYRFRILAV 90 (214)
T ss_dssp EEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceeEEecCCcCCCEEEEEEEEE
Confidence 34677899999999999999754
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=83.84 E-value=2 Score=44.59 Aligned_cols=73 Identities=23% Similarity=0.284 Sum_probs=44.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCc-ceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNL-NHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~-~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+++.-.. +++++++|..... |. ...=.|+|....... ... +.. +.-
T Consensus 372 ~~~~l~~~~~~-~~s~~l~W~~p~~--~~--------~~~y~v~y~~~~~~~~~~~----~~~--------------~~~ 422 (461)
T 3csg_A 372 VPTNLEVVAAT-PTSLLISWDASYS--SS--------VSYYRITYGETGGNSPVQE----FTV--------------PGS 422 (461)
T ss_dssp SSCCCEEEEEC-SSCEEEECCCTTG--GG--------CSEEEEEEEETTCCSCCEE----EEE--------------ETT
T ss_pred CCcceEEeccC-CCeEEEEecCCCC--Cc--------ceEEEEEEEECCCCccceE----EEe--------------cCC
Confidence 57888876554 7889999976411 10 123456676653211 110 000 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
-.+++|+||+|||+|..+|....
T Consensus 423 ~~~~~i~~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 423 KSTATISGLSPGVDYTITVYAYS 445 (461)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEC
T ss_pred CceEEecCCCCCCEEEEEEEEEe
Confidence 25799999999999999998654
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.73 E-value=1.8 Score=45.89 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=58.1
Q ss_pred CCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCcccccc
Q 009637 72 TGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTS 151 (530)
Q Consensus 72 ~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~ 151 (530)
....|..+++... .++++.|+|.......+ ....=.|+|.......... .++ ..+. .
T Consensus 381 kP~PP~nl~v~~~-~stsl~LsW~~P~~~~~--------~~L~YeVrYr~~~~~~~~~------~vs----v~~~----~ 437 (483)
T 3e0g_A 381 YPHTPTSFKVKDI-NSTAVKLSWHLPGNFAK--------INFLCEIEIKKSNSVQEQR------NVT----IQGV----E 437 (483)
T ss_dssp CCCCCEEEEECCS-SSSSCCEEEECCSCCTT--------SBCCCEEEEECSSSCCCEE------ECC----CBCC----S
T ss_pred CCCCCeeeEEEEe-cCCeEEEEECCCCCCCC--------ceEEEEEEEEECCCCCceE------EEE----Eecc----C
Confidence 3456888887633 46889999987532111 1124578888765432111 010 0110 0
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCC-----CCCCceeEEEcCCC
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSI-----PAMSDVYYFRTLPA 191 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~p~ 191 (530)
.-.+.+.|.+|+|+|+|..||..... +.||+...|+|+.+
T Consensus 438 ~~~~s~~l~~L~PgT~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 438 NSSYLVALDKLNPYTLYTFRIRCSTETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp SSBCCCCCCSCCSSSSCEEEEECCCSSCCCCCCCCCCCCCCCCCC
T ss_pred CceeEEEEeccCCCcEEEEEEEEeeCCCCCcCCCCCceeeECCCC
Confidence 12345778999999999999975421 25777888988643
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.55 E-value=4.6 Score=37.55 Aligned_cols=102 Identities=12% Similarity=0.095 Sum_probs=55.8
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEE-EEEEEEeeeccccCCcccc
Q 009637 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEA-TGHSLVYDQLYPFEGLQNY 149 (530)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a-~g~~~~y~~~~~~~g~~~~ 149 (530)
+....|..+.+.. .+.+.|+|.......- ...+ .....=.|+|....+ .+..+ .+.. ..
T Consensus 99 Vkp~PP~nltv~~---~~~l~lsW~~P~~~p~--~~~~-~~~L~Yevryr~~~~-~W~~~~~~~~--~~----------- 158 (219)
T 3tgx_A 99 IKPAPPFDVTVTF---SGQYQISWRSDYEDPA--FYML-KGKLQYELQYRNRGD-PWAVSPRRKL--IS----------- 158 (219)
T ss_dssp BCCCCCEEEEEEE---SSSEEEEEECGGGSGG--GGGG-TTSEEEEEEEEETTS-CTTSCCEEEE--EC-----------
T ss_pred EEeCCCCceEEEe---CCCEEEEEeCCcCCcc--cccc-ccCEEEEEEEecCCC-Cceeccccee--Ee-----------
Confidence 3345688887763 4689999998532100 0000 001234577776653 22111 1110 00
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEEeeCCC------C---CCCceeEEEcCCCC
Q 009637 150 TSGIIHHVRLTGLEPNNKYYYQCGDPSI------P---AMSDVYYFRTLPAS 192 (530)
Q Consensus 150 ~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~------~---~~S~~~~F~T~p~~ 192 (530)
..+....+.+.+|+|+|.|..||..... + .||....|+|.+..
T Consensus 159 ~~~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 159 VDSRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp SSCSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred cCCCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 0123456778899999999999853211 2 46888999997653
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=83.42 E-value=3.2 Score=44.81 Aligned_cols=79 Identities=10% Similarity=0.125 Sum_probs=47.1
Q ss_pred CceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEE
Q 009637 76 PEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIH 155 (530)
Q Consensus 76 P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h 155 (530)
|....++-. +.+++.++|......=|+.+ ..=.|++...++..+..+. .+ . ..
T Consensus 13 P~~P~v~~~-~~~sv~L~W~~P~~DGgs~I-------~~Y~vE~~~~~~~~W~~v~-~~---~-------------~t-- 65 (573)
T 3uto_A 13 PRFPIIENI-LDEAVILSWKPPALDGGSLV-------TNYTIEKREAMGGSWSPCA-KS---R-------------YT-- 65 (573)
T ss_dssp CEEEEEEEE-CSSCEEEEEECCSCCSSSCC-------CEEEEEEEESSSCCCEEEE-EE---S-------------SS--
T ss_pred CCCCEEEEe-eCCEEEEEECCCCcCCCCcc-------cEEEEEEEECCCCceEEec-cc---c-------------CC--
Confidence 444444322 26899999987532212111 2245777777776666552 11 0 01
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+++||.||+.|.|||.+.+..++|
T Consensus 66 ~~~V~~L~~g~~Y~FRV~A~N~~G~s 91 (573)
T 3uto_A 66 YTTIEGLRAGKQYEFRIIAENKHGQS 91 (573)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEEC
T ss_pred EEEeCCCCCCCcEeEEEEEEcCceEc
Confidence 34679999999999999865543444
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=83.35 E-value=1.6 Score=35.31 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=20.7
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 182 (530)
..+.|+||+|||.|...|..-.....|+
T Consensus 59 ~s~~l~~L~PgT~Y~V~v~a~~~~~~S~ 86 (95)
T 2h41_A 59 TSVNIPDLLPGRKYIVNVYQISEDGEQS 86 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCccc
Confidence 4788999999999999987533234443
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=82.83 E-value=1.1 Score=41.58 Aligned_cols=38 Identities=13% Similarity=0.231 Sum_probs=27.2
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCc-eeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSD-VYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~-~~~F~T~p~~ 192 (530)
..+.|++|+|+|.|.+||...+.. .+|+ ...|+|.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~ 201 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKR 201 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCC
T ss_pred eEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCC
Confidence 467889999999999999754322 3454 4678886643
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=82.73 E-value=4 Score=40.47 Aligned_cols=86 Identities=16% Similarity=0.112 Sum_probs=48.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCC-CcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+.-. +.+++.|+|...... ...=.|+|..... ...... ... .
T Consensus 279 ~~P~~l~~~~~-~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~~~~~-----~~~-------------~ 328 (375)
T 3t1w_A 279 DSPTGIDFSDI-TANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED-----RVP-------------H 328 (375)
T ss_dssp CCCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCCSSCEEE-----EEE-------------T
T ss_pred CCCCccEeeec-cCCEEEEEECCCCcc-----------eeeEEEEEEECCCCCcceeE-----EcC-------------C
Confidence 35777766432 368899999864211 1233566666543 111111 010 1
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 189 (530)
-.....|+||+|+|.|.++|..-+..+.|+ ...++|+
T Consensus 329 ~~~~~~i~~L~p~t~Y~~~V~A~~~~G~s~p~s~~~~~~ 367 (375)
T 3t1w_A 329 SRNSITLTNLTPGTEYVVSIVALNGREESPLLIGQQSTV 367 (375)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred CccEEEECCCCCCCEEEEEEEEECCCCCCCceeeeeEEe
Confidence 123578899999999999997644334443 3445554
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.57 E-value=1.1 Score=40.83 Aligned_cols=39 Identities=26% Similarity=0.390 Sum_probs=28.9
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 193 (530)
....|.+|+|++.|.|||...+. +.+|....|+|.|..+
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 46778999999999999975432 2567788899988654
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=82.51 E-value=15 Score=34.57 Aligned_cols=89 Identities=8% Similarity=0.029 Sum_probs=46.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.... +++.|+|.-... ....=.|+|........... .+... .....
T Consensus 104 p~~~~~~~~~~--~si~l~W~~p~~-----------~i~~Y~v~~~~~~~~~~~~~-----~~~~~---------~~~~~ 156 (290)
T 3l5i_A 104 PVMDLKAFPKD--NMLWVEWTTPRE-----------SVKKYILEWCVLSDKAPCIT-----DWQQE---------DGTVH 156 (290)
T ss_dssp CCEEEEEEEET--TEEEEEEECCSS-----------CCCEEEEEEEEECSSSCCCC-----EEEEE---------ETTCS
T ss_pred ccceeEEEeCC--CeEEEEEeCCCC-----------CCCcEEEEEEECCCCCCCCc-----CeEEc---------cCCCc
Confidence 35556555443 699999986432 11234566765543311000 00000 01123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCC--CCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPA--MSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~--~S~~~~F~T~p 190 (530)
..+.+++|+|+|.|.+||..-+..+ .+.....+|..
T Consensus 157 ~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~~~~~~~t~~ 194 (290)
T 3l5i_A 157 RTYLRGNLAESKCYLITVTPVYADGPGSPESIKAYLKQ 194 (290)
T ss_dssp EEECCSCCCTTCEEEEEEEEEETTEECCCEEEEEESSC
T ss_pred ceEEecCcCCccEEEEEEEEEeCCcccccEEEEeEccc
Confidence 5667899999999999997543222 23334444543
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=81.07 E-value=3 Score=39.32 Aligned_cols=96 Identities=14% Similarity=0.064 Sum_probs=52.4
Q ss_pred CCCCCCceeEEeecCC-C----CeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCC
Q 009637 71 VTGFEPEQLSVSLSFN-H----DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEG 145 (530)
Q Consensus 71 ~~~~~P~qi~l~~~~~-~----~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g 145 (530)
+....|..+.+.+... . .++.|+|....... .+.+-....=.|+|....+..+....
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~----~~~g~~~l~Yevry~~~~~~~w~~~~-------------- 190 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNAD----IQKGWMVLEYELQYKEVNETKWKMMD-------------- 190 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSC----TTTTSCCEEEEEEEEETTCSSCEECC--------------
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCcc----ccCCceeeEEEEEEEECCCCceEEEe--------------
Confidence 3345688886555432 2 35999998753210 00000012345667665432221110
Q ss_pred ccccccCeEEEEEeCCCCCCCEEEEEEeeCCC-----CCCCceeEEEcC
Q 009637 146 LQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI-----PAMSDVYYFRTL 189 (530)
Q Consensus 146 ~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~-----~~~S~~~~F~T~ 189 (530)
...-..+.|.+|+|||+|..||..... +.||+...|+|+
T Consensus 191 -----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 -----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp -----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred -----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 001246788999999999999974321 256677777764
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=80.60 E-value=6.2 Score=35.82 Aligned_cols=86 Identities=15% Similarity=0.284 Sum_probs=52.5
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 73 ~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
...|..+.+.... .+.+.|+|...... ....-.|+|....+..+..+. . .
T Consensus 99 P~pP~~l~~~~~~-~~~l~l~W~~p~~~----------~~l~yev~y~~~~~~~w~~~~----~-------~-------- 148 (199)
T 2b5i_C 99 PWAPENLTLHKLS-ESQLELNWNNRFLN----------HCLEHLVQYRTDWDHSWTEQS----V-------D-------- 148 (199)
T ss_dssp CCCCEEEEEEEEE-TTEEEEEEECSSCS----------TTCEEEEEEEETTCSSCEEEE----E-------C--------
T ss_pred cCCCcEEEEEECC-CCCEEEEECCCCCC----------CceEEEEEEeecCCcccEEEe----c-------c--------
Confidence 3568888887654 36899999885310 112346888876554443221 0 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC------CC---CCCceeEEEc
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS------IP---AMSDVYYFRT 188 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~------~~---~~S~~~~F~T 188 (530)
......|.+|+|++.|..||.... .+ .||+...|.|
T Consensus 149 ~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t 193 (199)
T 2b5i_C 149 YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGS 193 (199)
T ss_dssp SSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC--
T ss_pred CceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecC
Confidence 113567799999999999986433 12 4555666665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 530 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 5e-62 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 9e-22 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 5e-21 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 3e-18 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 1e-07 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-07 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 4e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 1e-04 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 3e-04 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 203 bits (518), Expect = 5e-62
Identities = 113/329 (34%), Positives = 154/329 (46%), Gaps = 72/329 (21%)
Query: 192 SGPQSYPKRIAIVGDLGLTYNTTCTINH--MSSNEPDLVLLVGDVTYANLYLTNGTGSDC 249
+G P ++GDLG ++++ T++H +S + VL VGD++YA+ Y +
Sbjct: 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNH------ 54
Query: 250 YSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE---AQAGNQTFVAYSS 306
RWD WGRF + V+ P + GNHEIE + F +S
Sbjct: 55 -------------DNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSY 101
Query: 307 RFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWL 366
R+ P E S S S F+YS H I+L +Y +Y + QY WL+K+L V RS TPWL
Sbjct: 102 RYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWL 161
Query: 367 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL--- 423
+ H P Y+SY+ H+ E E MR + EA Y VD+VF GHVHAYERS RV N
Sbjct: 162 IVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 221
Query: 424 --------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSG 475
D PV+ITIGD GN +
Sbjct: 222 NGLCTPVKDQSAPVYITIGDAGNYGVID-------------------------------- 249
Query: 476 PAAGKFCWDRQPDYSAFRESSFGHGILEV 504
QP+YSAFRE+SFGHG+ ++
Sbjct: 250 ----SNMIQPQPEYSAFREASFGHGMFDI 274
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 88.5 bits (219), Expect = 9e-22
Identities = 32/135 (23%), Positives = 49/135 (36%), Gaps = 22/135 (16%)
Query: 57 AVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVAS 115
VD+P + P+Q+ ++ + I+W T K A+
Sbjct: 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTP-----------YDKAGAN 54
Query: 116 FVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDP 175
V Y + + A G + Y NYTS IHH + LE + KYYY+ G
Sbjct: 55 KVFYWSENSKSQKRAMGTVVTYKY-------YNYTSAFIHHCTIKDLEYDTKYYYRLGFG 107
Query: 176 SIPAMSDVYYFRTLP 190
++F T P
Sbjct: 108 D---AKRQFWFVTPP 119
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 86.1 bits (213), Expect = 5e-21
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 23/133 (17%)
Query: 59 DIPDTDPLVRRRVTGFEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFV 117
D+P + R P+Q+ ++ ++ I+W+T + + +S V
Sbjct: 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMD------------EPGSSAV 49
Query: 118 RYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSI 177
RY + + A G Y NY+SG IHH + L+ N KYYY+ G +
Sbjct: 50 RYWSEKNGRKRIAKGKMSTYRF-------FNYSSGFIHHTTIRKLKYNTKYYYEVGLRN- 101
Query: 178 PAMSDVYYFRTLP 190
+ + F T P
Sbjct: 102 --TTRRFSFITPP 112
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 82.9 bits (203), Expect = 3e-18
Identities = 56/306 (18%), Positives = 85/306 (27%), Gaps = 64/306 (20%)
Query: 200 RIAIVGDLGLTYNTTCT-----------INHMSSNEPDLVLLVGDVTYANLYLTNGTGSD 248
R VGD G N + + D +L +GD Y
Sbjct: 6 RFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGV-------- 57
Query: 249 CYSCSFSKTPIHETYQPRWDYWGR--FMQNLVSKVPIMVVEGNHEIEAQAGNQT-FVAYS 305
H+ R+ F + VP V+ GNH+ Q + S
Sbjct: 58 -----------HDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKIS 106
Query: 306 SRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGH-----------------QY 348
R+ FPS F + + ML S Q
Sbjct: 107 KRWNFPSPYYRL--RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQL 164
Query: 349 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 408
W++K LA LVA +P W + + C+ ++ LL ++ V GH
Sbjct: 165 AWIKKQLAAAKE--DYVLVAGHYPVWSIA---EHGPTHCLVKQLLPLLTTHKVTAYLCGH 219
Query: 409 VHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFC 468
H + D G + G G ++ P + +GGF
Sbjct: 220 DHNLQYLQ-------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFA 272
Query: 469 ATNFTS 474
T
Sbjct: 273 YVEITP 278
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 51.2 bits (121), Expect = 1e-07
Identities = 23/218 (10%), Positives = 68/218 (31%), Gaps = 5/218 (2%)
Query: 198 PKRIAIVGDLGLTYNTTCTI-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
P+++ + + ++ + ++ +PD++++VG++ + ++
Sbjct: 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNR 61
Query: 257 TPIHETYQPRWDYWGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES 315
IHE + +F + + V VV G ++ + + + +
Sbjct: 62 KVIHENEHYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYEAETAYPNIRVLH 121
Query: 316 GSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPW---LVATWHP 372
+ + F G ++ D +W + + + P + P
Sbjct: 122 EGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPP 181
Query: 373 PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 410
+ + ++ S ++ GHV
Sbjct: 182 IGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 219
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 50.1 bits (118), Expect = 3e-07
Identities = 25/232 (10%), Positives = 56/232 (24%), Gaps = 32/232 (13%)
Query: 217 INHMSSNEPDLVLLVGDVTYAN--------------------------LYLTNGTGSDCY 250
+ V+ +GD+ + N +
Sbjct: 42 VLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFS 101
Query: 251 SCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF 310
S + ++ + D + + + + A + + +
Sbjct: 102 RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEK 161
Query: 311 PSEESGSLSSFYYSFNAGGIHFIMLG-----AYISYDKSGHQYKWLEKDLANVDRSVTPW 365
+ L+ ++ + + +G + S Q +WL+ L D
Sbjct: 162 HTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV 221
Query: 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNR 417
L+ H P + + A + L V GH H R
Sbjct: 222 LIF-SHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD 272
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 46.3 bits (108), Expect = 4e-06
Identities = 27/196 (13%), Positives = 51/196 (26%), Gaps = 35/196 (17%)
Query: 224 EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPI 283
PD ++ GD+ E R +
Sbjct: 45 RPDAIVFTGDLAD----------------------KGEPAAYRKLRGLVEPFAAQLGAEL 82
Query: 284 MVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 343
+ V GNH+ + F +E+ S++ G+ I+L +
Sbjct: 83 VWVMGNHD-----------DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHH 131
Query: 344 SGH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV 401
G + + ++A HPP S + + +L V
Sbjct: 132 HGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDV 191
Query: 402 DIVFNGHVHAYERSNR 417
+ GH+H +
Sbjct: 192 RAILAGHLHYSTNATF 207
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 41.6 bits (96), Expect = 1e-04
Identities = 16/160 (10%), Positives = 44/160 (27%), Gaps = 11/160 (6%)
Query: 262 TYQPRWDYWGRFMQ-NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSS 320
R + + Q P+ ++ GNH+ +A + + ++
Sbjct: 52 VNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKA-------LFLEYLQPLCPQLGSDANN 104
Query: 321 FYYSFNAGGIHFIMLGAYISYDKSGH-QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS 379
+ + + + + + G + + A + H P +
Sbjct: 105 MRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDKPATIFMHHPPLPLGN 164
Query: 380 SHYREAECM--RVEMEALLYSYGVDIVFNGHVHAYERSNR 417
+ C + + + +F GH H+ +
Sbjct: 165 AQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY 204
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 40.1 bits (92), Expect = 3e-04
Identities = 21/220 (9%), Positives = 44/220 (20%), Gaps = 33/220 (15%)
Query: 198 PKRIAIVGDL-GLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSK 256
+ I + G + D + L+G++
Sbjct: 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLM--------------------- 43
Query: 257 TPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAF--PSEE 314
DY F + +P V G + + E
Sbjct: 44 ----PKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLREAANVELVHPEMRNVHE 99
Query: 315 SGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPW 374
+ + Y G G ++ + E L + + +H
Sbjct: 100 TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMP 159
Query: 375 YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414
Y + E + + +V
Sbjct: 160 YHKGLNEQGSHEVAHLIKT-----HNPLLVLVAGKGQKHE 194
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 530 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.97 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.9 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.9 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.87 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.85 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.64 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.61 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.03 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.02 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.02 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 98.98 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 98.96 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 98.8 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.53 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.42 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.25 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.03 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.76 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.34 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.3 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.96 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.85 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 96.83 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.78 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.77 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.71 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 96.69 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 96.62 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 96.51 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.49 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 96.48 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 96.47 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.44 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.41 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 96.41 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.39 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.33 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.31 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.28 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.26 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.25 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.22 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.21 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.12 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.12 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.09 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.07 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.06 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.05 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.02 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.01 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 96.0 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.99 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.96 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 95.94 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.9 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.89 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 95.89 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.88 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.81 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 95.8 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.7 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.69 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 95.68 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.66 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.66 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.61 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.55 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.54 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.51 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 95.51 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 95.5 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 95.4 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.28 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.25 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.16 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.01 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 94.99 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 94.94 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 94.92 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 94.88 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 94.86 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 94.73 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 94.67 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 94.63 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 94.42 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 94.26 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 94.18 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 94.17 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.15 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 93.84 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 93.64 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 93.58 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 93.4 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 93.34 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 92.29 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 92.25 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 91.36 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 90.65 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 87.47 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 87.07 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 86.42 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 85.15 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 85.09 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 84.82 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 84.23 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 82.38 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 82.05 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 80.96 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=3.5e-56 Score=452.69 Aligned_cols=269 Identities=41% Similarity=0.752 Sum_probs=231.5
Q ss_pred CCeEEEEEccCCCCCChHHHHHHHH--hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 197 YPKRIAIVGDLGLTYNTTCTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~~~~~~~~l~--~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
.|+||+++||+|.+.....++.++. +.+|||||++||++|+++... ....+|+.|++.+
T Consensus 6 ~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~-------------------~~~~~wd~~~~~~ 66 (312)
T d2qfra2 6 VPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPN-------------------HDNVRWDTWGRFT 66 (312)
T ss_dssp CCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGG-------------------GCTHHHHHHHHHH
T ss_pred CCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcc-------------------cchHHHHHHHHHH
Confidence 4899999999998776677776643 468999999999999865321 1246899999999
Q ss_pred HHhhhcCCeEEccCCcccccc---ccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHH
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQ---AGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 351 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~---~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL 351 (530)
+++.+.+|+|+++||||+... .....|..|..+|.+|.+++....+.||+|++|++|||+||++..+....+|++||
T Consensus 67 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL 146 (312)
T d2qfra2 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWL 146 (312)
T ss_dssp HHHHTTSCEEECCCGGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHH
T ss_pred HHHhhcceEEEecccccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHH
Confidence 999999999999999997543 22457889999999999887777889999999999999999998888899999999
Q ss_pred HHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCcc--------
Q 009637 352 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL-------- 423 (530)
Q Consensus 352 ~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~-------- 423 (530)
+++|++++++++||+||++|+|+|++...+..+.+.+|+.|++||.+++||+||+||+|.|||++|+++.++
T Consensus 147 ~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~ 226 (312)
T d2qfra2 147 KKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCT 226 (312)
T ss_dssp HHHHHTCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCS
T ss_pred HHHHHHHhhcCCCEEEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccc
Confidence 999999988899999999999999987666666778999999999999999999999999999999987653
Q ss_pred ---CCCCcEEEEeCCCccccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCCCCccceecCCcceE
Q 009637 424 ---DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 500 (530)
Q Consensus 424 ---~~~G~vyIv~G~gG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~wsa~r~~~~G~~ 500 (530)
+++|++||++|+||+.++.... ...++|+||+||+.+|||+
T Consensus 227 ~~~~~~g~vyiv~G~gG~~~~~~~~------------------------------------~~~~~~~~s~~~~~~~G~~ 270 (312)
T d2qfra2 227 PVKDQSAPVYITIGDAGNYGVIDSN------------------------------------MIQPQPEYSAFREASFGHG 270 (312)
T ss_dssp CEECTTSCEEEEECCSCTTSCCCCC------------------------------------BCSSCCTTEEEEECCCEEE
T ss_pred cccCCCcCEEEEECcCCCccccccc------------------------------------ccCCCCCeeEEEecCCCEE
Confidence 5789999999999987654321 1236789999999999999
Q ss_pred EEEEeecceeeeeeeeccCC
Q 009637 501 ILEVLSLSLLFVPLFLQPKF 520 (530)
Q Consensus 501 ~l~v~n~t~~~~~~~~~~~~ 520 (530)
+|+|+|+|||.|+++.+...
T Consensus 271 ~l~v~n~t~l~~~~~~~~d~ 290 (312)
T d2qfra2 271 MFDIKNRTHAHFSWNRNQDG 290 (312)
T ss_dssp EEEECSSSEEEEEEEESSSC
T ss_pred EEEEEcCCeEEEEEEECCCC
Confidence 99999999999998865544
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=4.3e-30 Score=255.09 Aligned_cols=204 Identities=23% Similarity=0.329 Sum_probs=144.6
Q ss_pred CeEEEEEccCCCCCCh-----------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHH
Q 009637 198 PKRIAIVGDLGLTYNT-----------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 266 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-----------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~ 266 (530)
++||+++||+|...+. ..+.+.+.+.+|||||++||++|.++.. ..+..+
T Consensus 4 ~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~-------------------~~~~~~ 64 (302)
T d1utea_ 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVH-------------------DAKDKR 64 (302)
T ss_dssp CEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCS-------------------STTCTH
T ss_pred CeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCC-------------------cccHHH
Confidence 5899999999876432 1223344457999999999999965321 112345
Q ss_pred HHHHHHHH--HHhhhcCCeEEccCCcccccccc-ccchHHHhhhcCCCCCCCCCCCcceEEEEc------CcEEEEEEcc
Q 009637 267 WDYWGRFM--QNLVSKVPIMVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEESGSLSSFYYSFNA------GGIHFIMLGA 337 (530)
Q Consensus 267 wd~~~~~l--~~l~~~vP~~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~------G~v~fI~Ldt 337 (530)
|..+.+.+ .....++|+++++||||+..... ...+..+..++.+| ..||++.+ +.++|+++|+
T Consensus 65 ~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt 136 (302)
T d1utea_ 65 FQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDT 136 (302)
T ss_dssp HHHHTTTTSCSGGGTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCH
T ss_pred HHHHHHHHhhhhhhcCCceEEeecccccccccccccchhhccccccCC--------CcccceeecccCCCCcEEEEEccc
Confidence 55443322 22357899999999999864321 11122233334344 24677654 4799999997
Q ss_pred cccC-----------------CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcC
Q 009637 338 YISY-----------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG 400 (530)
Q Consensus 338 ~~~~-----------------~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~ 400 (530)
.... ....+|++||+++|++. +.+|+|+++|+|+|+.... ......+..|++||.+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~ 211 (302)
T d1utea_ 137 VTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHK 211 (302)
T ss_dssp HHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTT
T ss_pred eeEeecccccccccccccccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcC
Confidence 4210 01578999999999984 5689999999999986532 334567889999999999
Q ss_pred CcEEEEccccCceeeeecccCccCCCCcEEEEeCCCcccc
Q 009637 401 VDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 440 (530)
Q Consensus 401 VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~e 440 (530)
|++|||||+|.|+|+. .++++.||++|+||...
T Consensus 212 v~~~~~GH~H~~~r~~-------~~~~~~~i~~g~g~~~~ 244 (302)
T d1utea_ 212 VTAYLCGHDHNLQYLQ-------DENGLGFVLSGAGNFMD 244 (302)
T ss_dssp CSEEEECSSSSEEEEE-------CTTCCEEEEECBSSCCC
T ss_pred ceEEEeCCCcceEEEe-------cCCccEEEEeCCCCCCC
Confidence 9999999999999986 46889999999998743
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.90 E-value=6.1e-24 Score=181.59 Aligned_cols=110 Identities=29% Similarity=0.452 Sum_probs=94.3
Q ss_pred CCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEe
Q 009637 59 DIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVY 137 (530)
Q Consensus 59 ~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y 137 (530)
|+|..+...+.+...++|+||||++++++ ++|+|+|+|.+. ...+.|+||++++.+...++|.+..|
T Consensus 2 ~~p~~~~~~~~p~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~------------~~~~~V~yg~~~~~~~~~a~~~~~~~ 69 (112)
T d2qfra1 2 DMPLDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDE------------PGSSAVRYWSEKNGRKRIAKGKMSTY 69 (112)
T ss_dssp BCCTTSGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSS------------CCCCEEEEEESSSCCCEEEECEEECC
T ss_pred CCCCCCccccCCCCCCCCccEEEeCcCCCCCEEEEEEECCCC------------CCCcEEEEEECCCCCCcEEEEEEEEE
Confidence 68887777788888899999999999875 899999999653 14589999999999999999988766
Q ss_pred eeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCC
Q 009637 138 DQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (530)
Q Consensus 138 ~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 190 (530)
... ++.++++|+|+|+||+|+|+||||||++ +||++++|||+|
T Consensus 70 ~~~-------~~~~~~~h~v~Lt~L~P~T~Y~YrVG~~---~~S~~~~F~T~P 112 (112)
T d2qfra1 70 RFF-------NYSSGFIHHTTIRKLKYNTKYYYEVGLR---NTTRRFSFITPP 112 (112)
T ss_dssp BCS-------SCBCCEEEEEEECSCCTTCEEEEEECCS---SSCEEEEEECCC
T ss_pred Eec-------ccCCcEEEEEEECCCCCCCEEEEEECCC---CceeeEEEEcCC
Confidence 421 3457799999999999999999999975 699999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.90 E-value=7.7e-24 Score=182.95 Aligned_cols=113 Identities=27% Similarity=0.413 Sum_probs=96.8
Q ss_pred CCCCCCCCCcccccCCCCCCceeEEeecCCC-CeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEE
Q 009637 57 AVDIPDTDPLVRRRVTGFEPEQLSVSLSFNH-DSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSL 135 (530)
Q Consensus 57 ~~~~~~~~p~~~~~~~~~~P~qi~l~~~~~~-~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~ 135 (530)
+.|+|...+.+..+.....|+||||++++++ ++|+|+|+|.... ...+.|+||++++.+...+.|.+.
T Consensus 6 ~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~-----------~~~~~V~yG~~~~~~~~~a~g~s~ 74 (119)
T d1xzwa1 6 DVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDK-----------AGANKVFYWSENSKSQKRAMGTVV 74 (119)
T ss_dssp HHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCC-----------TTTTEEEEEETTCCCCEEEECEEE
T ss_pred ccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCC-----------CCCCEEEEcCCCCCCccEEEEEEE
Confidence 4589998888888888889999999999875 8999999996432 134799999999999999999888
Q ss_pred EeeeccccCCccccccCeEEEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCC
Q 009637 136 VYDQLYPFEGLQNYTSGIIHHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (530)
Q Consensus 136 ~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 190 (530)
.|+.. +++++++|+|+|+||+|+|+||||||++ +||++++|||+|
T Consensus 75 ~~~~~-------~~~~~~~H~v~LtgL~P~T~Y~YrVG~~---~~S~~~~F~T~P 119 (119)
T d1xzwa1 75 TYKYY-------NYTSAFIHHCTIKDLEYDTKYYYRLGFG---DAKRQFWFVTPP 119 (119)
T ss_dssp CCEET-------TEECCEEEEEEECCCCTTCEEEEEECCG---GGCEEEEEECCC
T ss_pred Eeecc-------cccCCeEEEEEECCCCCCCEEEEEECCC---CccceEEEeCCC
Confidence 77532 4567899999999999999999999975 599999999987
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.87 E-value=3.5e-21 Score=187.45 Aligned_cols=193 Identities=15% Similarity=0.189 Sum_probs=129.5
Q ss_pred CeEEEEEccCCCCCC---------h----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCcccccCCCCCCcccc
Q 009637 198 PKRIAIVGDLGLTYN---------T----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 262 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~---------~----~~~~~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~ 262 (530)
++||++++|+|.... . .++++++.+ .+|||||++||++. +|.
T Consensus 4 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~------~g~----------------- 60 (256)
T d2hy1a1 4 DYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLAD------KGE----------------- 60 (256)
T ss_dssp SEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBS------SCC-----------------
T ss_pred CEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC------CCC-----------------
Confidence 699999999997432 1 334555544 47999999999994 233
Q ss_pred chHHHHHHHHHHHHhh--hcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEccccc
Q 009637 263 YQPRWDYWGRFMQNLV--SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS 340 (530)
Q Consensus 263 y~~~wd~~~~~l~~l~--~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~ 340 (530)
...++.+.+.++++. .++|+++++||||.. .. +...+.... ......+|++..++++|++|||...
T Consensus 61 -~~~~~~~~~~l~~~~~~~~~p~~~v~GNHD~~-----~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~ 128 (256)
T d2hy1a1 61 -PAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR-----AE---LRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVP 128 (256)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH-----HH---HHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCT
T ss_pred -hhHHHHHHHHhhhhhhhcCCCEEEEcccccch-----hh---hhhhhcccc---ccccccceEEEecccceeeeeeeec
Confidence 234555666665543 368999999999953 12 222221111 1234567899999999999998643
Q ss_pred C----CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHcCCcEEEEccccCceee
Q 009637 341 Y----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERS 415 (530)
Q Consensus 341 ~----~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~ 415 (530)
. ....+|++||++.|++... ..+|+++|+|++......... ....++.+..++++++|+++||||+|...+.
T Consensus 129 ~~~~g~~~~~~~~wl~~~L~~~~~---~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~ 205 (256)
T d2hy1a1 129 GHHHGEIRASQLGWLAEELATPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNA 205 (256)
T ss_dssp TCSSBCCCHHHHHHHHHHHTSCCT---TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEE
T ss_pred CCcCCcccHHHHHHHHHHHHhhhc---cCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhce
Confidence 3 2468999999999998532 236778888877643211100 0012467889999999999999999976654
Q ss_pred eecccCccCCCCcEEEEeCCC
Q 009637 416 NRVFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 416 ~pv~~~~~~~~G~vyIv~G~g 436 (530)
. -+|+.++++|+.
T Consensus 206 ~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 206 T--------FVGIPVSVASAT 218 (256)
T ss_dssp E--------ETTEEEEECCCC
T ss_pred E--------ECCEEEEEcCCc
Confidence 2 268888877553
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.85 E-value=4.6e-20 Score=181.32 Aligned_cols=194 Identities=16% Similarity=0.267 Sum_probs=128.7
Q ss_pred eEEEEEccCCCCCC---------h----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc
Q 009637 199 KRIAIVGDLGLTYN---------T----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 263 (530)
Q Consensus 199 ~rf~v~gD~g~~~~---------~----~~~~~~l~~--~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y 263 (530)
+||++++|+|.... . .++++++.+ .+||+|+++||+++ +|.
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~------~~~------------------ 56 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVN------CGR------------------ 56 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS------SCC------------------
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCc------CCc------------------
Confidence 58999999996421 2 344555553 48999999999995 232
Q ss_pred hHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC--
Q 009637 264 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-- 341 (530)
Q Consensus 264 ~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~-- 341 (530)
...++.+.+.++++ .+|+++++||||... .+..+..... +.. ........|.++.++++||+||+....
T Consensus 57 ~~~y~~~~~~l~~l--~~p~~~i~GNHD~~~-----~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~i~ldt~~~~~~ 127 (271)
T d3d03a1 57 PEEYQVARQILGSL--NYPLYLIPGNHDDKA-----LFLEYLQPLC-PQL-GSDANNMRCAVDDFATRLLFIDSSRAGTS 127 (271)
T ss_dssp HHHHHHHHHHHTTC--SSCEEEECCTTSCHH-----HHHHHHGGGS-GGG-CSCGGGCCEEECSSSSEEEECCCCCTTCS
T ss_pred chhHHHHHHHHhcc--CCCEEEEecCccchH-----HHHHHhhhhh-hcc-ccccCcceEEEecCCeEEEecccccCCCC
Confidence 23455666666665 789999999999742 2222222110 100 112345678889999999999986433
Q ss_pred --CCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch-hHHHHHHHHHHHHHc-CCcEEEEccccCceeeee
Q 009637 342 --DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNR 417 (530)
Q Consensus 342 --~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~-~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~p 417 (530)
....+|++||+++|++.. +.+ +|+++|+|++......... .....+++.++|.++ +|+++|+||+|......
T Consensus 128 ~~~l~~~ql~wL~~~L~~~~--~~~-~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~- 203 (271)
T d3d03a1 128 KGWLTDETISWLEAQLFEGG--DKP-ATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ- 203 (271)
T ss_dssp SBCCCHHHHHHHHHHHHHHT--TSC-EEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE-
T ss_pred cceecHHHHHHHHHHHhhhc--cce-eEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE-
Confidence 236899999999999863 334 5666777766554332221 111246788999998 69999999999866653
Q ss_pred cccCccCCCCcEEEEeCCC
Q 009637 418 VFNYTLDPCGPVHITIGDG 436 (530)
Q Consensus 418 v~~~~~~~~G~vyIv~G~g 436 (530)
-+|+.++++.+.
T Consensus 204 -------~~g~~~~~~pst 215 (271)
T d3d03a1 204 -------YRQALISTLPGT 215 (271)
T ss_dssp -------ETTEEEEECCCS
T ss_pred -------ECCEEEEEcCCc
Confidence 267777665443
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=7.6e-21 Score=186.68 Aligned_cols=205 Identities=20% Similarity=0.180 Sum_probs=131.0
Q ss_pred eEEEEEccCCCCCC--------------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 199 KRIAIVGDLGLTYN--------------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 199 ~rf~v~gD~g~~~~--------------------~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
|||++++|+|.+.. ..+.++.+.+.+|||||++||+++.....
T Consensus 4 f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~----------------- 66 (320)
T d2nxfa1 4 FTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRR----------------- 66 (320)
T ss_dssp EEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHH-----------------
T ss_pred EEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcc-----------------
Confidence 89999999997520 12345566678999999999999532100
Q ss_pred ccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhc--------CCCCCCCCCCCcceEEEEcCcE
Q 009637 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF--------AFPSEESGSLSSFYYSFNAGGI 330 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f--------~~P~~~~~~~~~~yYsf~~G~v 330 (530)
.+.....|+.+.+.++. .++|++.++||||........ ...... .......+......+.+..+++
T Consensus 67 -~~~~~~~~~~~~~~~~~--~~~p~~~v~GNHD~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (320)
T d2nxfa1 67 -RDASDRALDTVMAELDA--CSVDVHHVWGNHEFYNFSRPS---LLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNF 140 (320)
T ss_dssp -TTCHHHHHHHHHHHHHT--TCSEEEECCCHHHHHHCCHHH---HHTSTTCCCC------CEECGGGTCCCEEEEEETTE
T ss_pred -hhHHHHHHHHHHHHHHH--cCCCEEEecccCccccccchh---cccccccchhhhcccccccccCCCCccceeecCCCe
Confidence 00112234444444443 379999999999986321110 000000 0000111123345667788999
Q ss_pred EEEEEcccccC----------------------------------------------CCCHHHHHHHHHHHhcccCCCCC
Q 009637 331 HFIMLGAYISY----------------------------------------------DKSGHQYKWLEKDLANVDRSVTP 364 (530)
Q Consensus 331 ~fI~Ldt~~~~----------------------------------------------~~~~~Q~~WL~~~L~~~~r~~~p 364 (530)
+|+.+++.... ..+.+|++||+++|+++.++. .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~~~-~ 219 (320)
T d2nxfa1 141 RFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ-E 219 (320)
T ss_dssp EEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHHT-C
T ss_pred EEEEecCcccccccccccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhhcC-C
Confidence 99999863110 125899999999999865443 4
Q ss_pred EEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCcEEEEeCC
Q 009637 365 WLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (530)
Q Consensus 365 wvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~ 435 (530)
++|+++|+|++........ .....+++.++|.++ +|+++|+||+|..++.. ..+|+.||++|+
T Consensus 220 ~viv~~H~p~~~~~~~~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~-------~~~g~~~i~~~~ 283 (320)
T d2nxfa1 220 RVLIFSHLPVHPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT-------DSSGAQHITLEG 283 (320)
T ss_dssp EEEEEESSCCCTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE-------CTTSCEEEECCC
T ss_pred ceEEEECCCCccCCCCCcc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee-------ccCCCEEEECCe
Confidence 6899999998875443211 112356788899999 59999999999887653 357899998765
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=2e-15 Score=141.82 Aligned_cols=193 Identities=12% Similarity=0.049 Sum_probs=117.8
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 276 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~ 276 (530)
+-+|+++||+|....+ .+.++.+.+.++|+|+++||++.. |.. ..++..+.+.+..
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~------~~~-----------------~~~~~~~~~~L~~ 61 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPK------AAK-----------------SRDYAAFFRILSE 61 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCT------TCC-----------------HHHHHHHHHHHGG
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------Ccc-----------------chHHHHhhhhhcc
Confidence 4588999999986443 344555566799999999999842 210 1233444444444
Q ss_pred hhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccC----------CCCHH
Q 009637 277 LVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY----------DKSGH 346 (530)
Q Consensus 277 l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~----------~~~~~ 346 (530)
+ .+|+++++||||...... ....+......+.. ......+.+..+++.++.++..... .....
T Consensus 62 ~--~~pv~~i~GNHD~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T d1uf3a_ 62 A--HLPTAYVPGPQDAPIWEY--LREAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp G--CSCEEEECCTTSCSHHHH--HHHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred c--cceEEEEecCCCchhhhh--hhhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHH
Confidence 3 789999999999742110 00111111111100 0112235677888888888753211 12578
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCC
Q 009637 347 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPC 426 (530)
Q Consensus 347 Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~ 426 (530)
|.+|+++.++... . .+.|+++|.|++.....+.. .+.+.+++++++++++++||+|..+.. ..
T Consensus 135 ~~~~l~~~l~~~~--~-~~~il~~H~p~~~~~~~~~~-----~~~~~~~~~~~~~~lvl~GH~H~~~~~---------~g 197 (228)
T d1uf3a_ 135 VAEYRLKALWELK--D-YPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPLLVLVAGKGQKHEM---------LG 197 (228)
T ss_dssp HHHHHHGGGGGSC--S-CCEEEEESSCBCBTTTBTTS-----BHHHHHHHHHHCCSEEEECCSSCEEEE---------ET
T ss_pred HHHHHHHHHhhcc--C-CceEEEEeeeccCccccccc-----cHHHHHHHHhcCCcEEEEcccccchhc---------cC
Confidence 8999999988753 2 23688888888765432222 135677788999999999999975322 13
Q ss_pred CcEEEEeCCCc
Q 009637 427 GPVHITIGDGG 437 (530)
Q Consensus 427 G~vyIv~G~gG 437 (530)
++.++..|+-+
T Consensus 198 ~~~~v~pG~~~ 208 (228)
T d1uf3a_ 198 ASWVVVPGDLS 208 (228)
T ss_dssp TEEEEECCBGG
T ss_pred CEEEEECCccc
Confidence 45555556554
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.61 E-value=4.2e-15 Score=141.81 Aligned_cols=220 Identities=12% Similarity=0.197 Sum_probs=115.1
Q ss_pred CeEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccc-hHHHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY-QPRWDYWGRFMQ 275 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y-~~~wd~~~~~l~ 275 (530)
|.||++++|+|..... ...++.+.+.+||+||++||+++.-.. +......+.....+...+.... ...-..+..+++
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~ 80 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEAL-EKEYERAHLARREPNRKVIHENEHYIIETLDKFFR 80 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHH-HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCC-CHHHHHHHHhhhhhceeeeccccccchhhHHHHHH
Confidence 5799999999976543 445666677899999999999953110 0000000000000000000000 000012223344
Q ss_pred Hh-hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCC---------CCH
Q 009637 276 NL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD---------KSG 345 (530)
Q Consensus 276 ~l-~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~---------~~~ 345 (530)
.+ ...+|+++++||||..... .....+......+.. ........+..+++.|+.+++..... ...
T Consensus 81 ~L~~~~~pv~~i~GNHD~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 81 EIGELGVKTFVVPGKNDAPLKI--FLRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHHTTCSEEEEECCTTSCCHHH--HHHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHHhcCCcEEEEeCCCcchhhH--HHHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 44 2478999999999964211 111222221111110 01122344556778888877532211 123
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCch--hHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCcc
Q 009637 346 HQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTL 423 (530)
Q Consensus 346 ~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~--~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~ 423 (530)
.+..|++..+++. .....|+++|+|++.+....... .....+.+.+++++++++++++||+|.....
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~-------- 224 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL-------- 224 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE--------
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeEe--------
Confidence 3444555555543 33457899999987654322111 1112356888999999999999999974332
Q ss_pred CCCCcEEEEeCC
Q 009637 424 DPCGPVHITIGD 435 (530)
Q Consensus 424 ~~~G~vyIv~G~ 435 (530)
.+++.++..|+
T Consensus 225 -~g~~~~~~pGs 235 (257)
T d2yvta1 225 -VGNTIVVNPGE 235 (257)
T ss_dssp -ETTEEEEECCB
T ss_pred -cCCeEEEECCc
Confidence 25566666664
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.03 E-value=7.8e-10 Score=99.28 Aligned_cols=142 Identities=15% Similarity=0.103 Sum_probs=86.2
Q ss_pred eEEEEEccCCCCCC-hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHHHh
Q 009637 199 KRIAIVGDLGLTYN-TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 277 (530)
Q Consensus 199 ~rf~v~gD~g~~~~-~~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~~l 277 (530)
+||+++||+|.... ..++++.+.+.++|.|+++||++.. .. .+.+.
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~---------------------------~~----~~~l~-- 47 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL---------------------------FV----IKEFE-- 47 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST---------------------------HH----HHHGG--
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH---------------------------HH----HHHHh--
Confidence 59999999997532 2456777778899999999999831 01 11122
Q ss_pred hhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHHhc
Q 009637 278 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 357 (530)
Q Consensus 278 ~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L~~ 357 (530)
....|++.+.||||..... ............ .-+....+.+++
T Consensus 48 ~~~~~~~~v~GN~D~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~~~---------------------------- 90 (165)
T d1s3la_ 48 NLNANIIATYGNNDGERCK----LKEWLKDINEEN-----IIDDFISVEIDD---------------------------- 90 (165)
T ss_dssp GCSSEEEEECCTTCCCHHH----HHHHHHHHCTTC-----EEESEEEEEETT----------------------------
T ss_pred hcCccEEEEcccccccchh----hhHhhhhhcccc-----cCChhhceEECC----------------------------
Confidence 2357899999999974211 000111110000 001112222111
Q ss_pred ccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCc
Q 009637 358 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 437 (530)
Q Consensus 358 ~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG 437 (530)
..|++.|.+.+ ..++.++.+.++|++++||+|..... .-+|+++|..|+-|
T Consensus 91 -------~~i~l~Hg~~~--------------~~~~~~~~~~~~d~v~~GHtH~~~~~--------~~~~~~~iNPGSvg 141 (165)
T d1s3la_ 91 -------LKFFITHGHHQ--------------SVLEMAIKSGLYDVVIYGHTHERVFE--------EVDDVLVINPGECC 141 (165)
T ss_dssp -------EEEEEEESCCH--------------HHHHHHHHHSCCSEEEEECSSCCEEE--------EETTEEEEECCCSS
T ss_pred -------cEEEEEECCcc--------------cHHHHHhhcCCCCEEEECCcCcceEE--------EECCEEEEECCCCC
Confidence 25677786543 23455677889999999999985433 13689999999877
Q ss_pred cc
Q 009637 438 NL 439 (530)
Q Consensus 438 ~~ 439 (530)
..
T Consensus 142 ~p 143 (165)
T d1s3la_ 142 GY 143 (165)
T ss_dssp CT
T ss_pred CC
Confidence 53
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.02 E-value=9.7e-09 Score=94.54 Aligned_cols=141 Identities=17% Similarity=0.341 Sum_probs=84.5
Q ss_pred EEEEEccCCCCCCh---HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 200 RIAIVGDLGLTYNT---TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 200 rf~v~gD~g~~~~~---~~~~~~-l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
=|+++||+|..... ...+.+ +...++|.|+|+||++.. ...+.++
T Consensus 5 lIlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~-------------------------------~~l~~l~ 53 (193)
T d2a22a1 5 LVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ-------------------------------EYVEMLK 53 (193)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH-------------------------------HHHHHHH
T ss_pred EEEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH-------------------------------HHHHHHH
Confidence 48999999974322 123344 445689999999999820 1223344
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDL 355 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~L 355 (530)
.+ .-+++.|.||||........ .+.. .+| ..-.+..++.
T Consensus 54 ~l--~~~v~~V~GN~D~~~~~~~~---~~~~--~lp---------~~~~~~~~~~------------------------- 92 (193)
T d2a22a1 54 NI--TKNVYIVSGDLDSAIFNPDP---ESNG--VFP---------EYVVVQIGEF------------------------- 92 (193)
T ss_dssp HH--CSCEEECCCTTCCSCCBCCG---GGTB--CCC---------SEEEEEETTE-------------------------
T ss_pred hh--CCCEEEEcCCCCcchhhhhH---HHHh--hCC---------ccEEEEECCE-------------------------
Confidence 43 34688999999975321111 1111 112 2233333433
Q ss_pred hcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCC
Q 009637 356 ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 435 (530)
Q Consensus 356 ~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~ 435 (530)
.|.+.|...+.... . .+.+..++.+.++|++++||+|...... -+|.++|..|+
T Consensus 93 ----------~i~l~H~~~~~~~~----~----~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGS 146 (193)
T d2a22a1 93 ----------KIGLMHGNQVLPWD----D----PGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGT 146 (193)
T ss_dssp ----------EEEEECSTTSSSTT----C----HHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCC
T ss_pred ----------EEEEEeccCCCCCC----C----HHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCC
Confidence 44555543322111 1 2456677888899999999999865432 36889999998
Q ss_pred Ccc
Q 009637 436 GGN 438 (530)
Q Consensus 436 gG~ 438 (530)
.|.
T Consensus 147 vg~ 149 (193)
T d2a22a1 147 ATG 149 (193)
T ss_dssp SSC
T ss_pred CCc
Confidence 775
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.02 E-value=8.2e-09 Score=94.20 Aligned_cols=134 Identities=16% Similarity=0.296 Sum_probs=83.9
Q ss_pred eEEEEEccCCCCCCh---HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT---TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 274 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~---~~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l 274 (530)
+||+++||+|..... .+.+.++. +.++|.|+|+||++.. ...+.+
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~~-------------------------------e~l~~l 49 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK-------------------------------ESYDYL 49 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH-------------------------------HHHHHH
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccch-------------------------------hhHHHH
Confidence 589999999975432 23344433 4579999999999821 122334
Q ss_pred HHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHHHH
Q 009637 275 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 354 (530)
Q Consensus 275 ~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~~~ 354 (530)
+.+ ..|++.+.||||... .+|. .-.+++++
T Consensus 50 ~~~--~~~v~~V~GN~D~~~--------------~~p~---------~~~~~~~g------------------------- 79 (182)
T d1z2wa1 50 KTL--AGDVHIVRGDFDENL--------------NYPE---------QKVVTVGQ------------------------- 79 (182)
T ss_dssp HHH--CSEEEECCCTTCCCT--------------TSCS---------EEEEEETT-------------------------
T ss_pred Hhh--CCceEEEeCCcCccc--------------ccce---------EEEEEEcC-------------------------
Confidence 443 347899999999641 1221 11122221
Q ss_pred HhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeC
Q 009637 355 LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIG 434 (530)
Q Consensus 355 L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G 434 (530)
+.|.+.|.+.+.... . .+.+..++.+.++|++++||+|...... -+|+++|..|
T Consensus 80 ----------~~i~~~Hg~~~~~~~----~----~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPG 133 (182)
T d1z2wa1 80 ----------FKIGLIHGHQVIPWG----D----MASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPG 133 (182)
T ss_dssp ----------EEEEEECSCCCCBTT----C----HHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECC
T ss_pred ----------cEEEEEeCCCCCCCC----C----HHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCC
Confidence 245666665443221 1 2345667778899999999999865432 2689999999
Q ss_pred CCccc
Q 009637 435 DGGNL 439 (530)
Q Consensus 435 ~gG~~ 439 (530)
+.|..
T Consensus 134 Sv~~p 138 (182)
T d1z2wa1 134 SATGA 138 (182)
T ss_dssp CTTCC
T ss_pred CCCCC
Confidence 87653
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.98 E-value=6.3e-10 Score=109.35 Aligned_cols=74 Identities=20% Similarity=0.362 Sum_probs=49.4
Q ss_pred eEEEEEccCCCCCCh--------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccch
Q 009637 199 KRIAIVGDLGLTYNT--------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 264 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~--------------~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~ 264 (530)
+||++++|+|.+... ..+++.+.+.++|+||++||++.. +. +. .
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~------~~------------~~----~ 58 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHS------SR------------PS----P 58 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSS------SS------------CC----H
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCC------CC------------CC----H
Confidence 699999999975321 123444456899999999999842 11 01 1
Q ss_pred HHHHHHHHHHHHhh-hcCCeEEccCCccccc
Q 009637 265 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEA 294 (530)
Q Consensus 265 ~~wd~~~~~l~~l~-~~vP~~~v~GNHD~~~ 294 (530)
.....+.+.++.+. .++|+++++||||...
T Consensus 59 ~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~ 89 (333)
T d1ii7a_ 59 GTLKKAIALLQIPKEHSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECCTTTCCS
T ss_pred HHHHHHHHHHhhHHhcCCcEEEeCCCCcccc
Confidence 12233445566653 4799999999999853
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.96 E-value=3.2e-10 Score=107.32 Aligned_cols=190 Identities=8% Similarity=0.001 Sum_probs=93.8
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 272 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~-----~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~ 272 (530)
++|+++||+|..... .++++.+.+ .++|.++++||++.. |. .-.+..+
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~------G~--------------------~~~evi~ 54 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGL------FP--------------------YPKEVIE 54 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSS------SS--------------------CHHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCC------CC--------------------CcHHHHH
Confidence 489999999964322 344555432 357999999999942 22 0123455
Q ss_pred HHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCCCCCCcceEEEEcCcEEEEEEcccccCCCCHHHHHHHH
Q 009637 273 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 352 (530)
Q Consensus 273 ~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~~~~~~~yYsf~~G~v~fI~Ldt~~~~~~~~~Q~~WL~ 352 (530)
.+..+..+.++++++||||.... .+......+... .... ..+.... .+ .........++.+||+
T Consensus 55 ~l~~l~~~~~v~~v~GNHD~~~~-------~~~~~~~~~~~~----~~~~---~~~~~~~-~~-~~~~~~~~~~~~~~l~ 118 (251)
T d1nnwa_ 55 VIKDLTKKENVKIIRGKYDQIIA-------MSDPHATDPGYI----DKLE---LPGHVKK-AL-KFTWEKLGHEGREYLR 118 (251)
T ss_dssp HHHHHHHHSCEEEECCHHHHHHH-------HSCTTCSSSGGG----GGSS---CCHHHHH-HH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCEEEEeccHHHHHH-------hccccccccchh----hhhc---cchhHHH-hh-HHHhhhcCHHHHHHHH
Confidence 56666566789999999996311 000000000000 0000 0000000 00 0000011345556665
Q ss_pred HHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHc-CCcEEEEccccCceeeeecccCccCCCCcEEE
Q 009637 353 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 431 (530)
Q Consensus 353 ~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyI 431 (530)
+...........-.+++.|.++........... .....+...+... ++|++++||+|.-.... .++..+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~H~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~i 189 (251)
T d1nnwa_ 119 DLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAE-QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVV 189 (251)
T ss_dssp TSCSCEEEEETTEEEEEESSCSSCTTTCCCCSS-CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEE
T ss_pred hcccceEEeeCCCcEEEEecCccCcccchhhhh-hHHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeecc
Confidence 433321111111256667766554332211110 1112233334444 68999999999744432 3678899
Q ss_pred EeCCCccc
Q 009637 432 TIGDGGNL 439 (530)
Q Consensus 432 v~G~gG~~ 439 (530)
..|+-|..
T Consensus 190 n~Gsvg~~ 197 (251)
T d1nnwa_ 190 CPGSVGFP 197 (251)
T ss_dssp EECCSSSC
T ss_pred cccccccc
Confidence 99998764
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.80 E-value=5.2e-08 Score=87.96 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEEEEeCCCccc
Q 009637 391 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 439 (530)
Q Consensus 391 ~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vyIv~G~gG~~ 439 (530)
.+..++.+.++|++++||+|...... .+|+++|..|+-|..
T Consensus 93 ~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 93 KLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQP 133 (173)
T ss_dssp HHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSC
T ss_pred HHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCC
Confidence 45667778899999999999865442 278999999998874
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=1.8e-07 Score=84.37 Aligned_cols=38 Identities=11% Similarity=0.274 Sum_probs=29.6
Q ss_pred eEEEEEccCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 009637 199 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 236 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~-~~~~~~l~~~~pDfvl~~GDl~Y 236 (530)
+||+++||+|..... .++++.+.+.++|.++++||++.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~ 40 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLN 40 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccc
Confidence 699999999964322 44556666679999999999984
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.42 E-value=1.3e-06 Score=79.56 Aligned_cols=46 Identities=17% Similarity=0.287 Sum_probs=34.4
Q ss_pred EEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCcee
Q 009637 366 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 414 (530)
Q Consensus 366 vIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR 414 (530)
.|+++|.|+........ ......+..+..+.+++++|+||+|....
T Consensus 108 ~i~l~H~P~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lhGH~H~~~~ 153 (188)
T d1xm7a_ 108 RILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (188)
T ss_dssp EEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred EEEEEeCCCcccccccc---ccchhHHHHHHHhcCceEEEEeeccCCcc
Confidence 68999999865543322 23346777899999999999999997543
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.25 E-value=3.6e-06 Score=83.62 Aligned_cols=187 Identities=17% Similarity=0.144 Sum_probs=96.5
Q ss_pred CCeEEEEEccCCCCCC--------h---HHHHHHHH----hCCCC-EEEEcCccccccccccCCCCCcccccCCCCCCcc
Q 009637 197 YPKRIAIVGDLGLTYN--------T---TCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 260 (530)
Q Consensus 197 ~~~rf~v~gD~g~~~~--------~---~~~~~~l~----~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~ 260 (530)
+.++|++.+|+|.... . ...++.+. +.+++ ++|.+||+.....+ .
T Consensus 7 ~~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~-------------------s 67 (337)
T d1usha2 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE-------------------S 67 (337)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHH-------------------H
T ss_pred eEEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHH-------------------H
Confidence 4689999999995321 1 12344443 35565 56669999842111 0
Q ss_pred ccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCC-------CC-CCCcceEEEEcCcEEE
Q 009637 261 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE-------SG-SLSSFYYSFNAGGIHF 332 (530)
Q Consensus 261 ~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~-------~~-~~~~~yYsf~~G~v~f 332 (530)
..+ +.....+.|+.+. .- ..++||||+.. +...+..+.....+|.-. .+ .....|.-++.+++++
T Consensus 68 ~~~--~g~~~~~~mn~~g--~D-a~~~GNHEfd~--G~~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kV 140 (337)
T d1usha2 68 DLQ--DAEPDFRGMNLVG--YD-AMAIGNHEFDN--PLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKI 140 (337)
T ss_dssp HTT--TTHHHHHHHHHHT--CC-EEECCGGGGSS--CHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEE
T ss_pred HHh--CChHHHHHHHhcC--Ce-EEEechhhhcc--chHHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEE
Confidence 001 1223344555442 22 56689999853 233444555555554211 01 1234566678888655
Q ss_pred --EEEccccc-------------CCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHH
Q 009637 333 --IMLGAYIS-------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLY 397 (530)
Q Consensus 333 --I~Ldt~~~-------------~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~ 397 (530)
|.+-+... +....+..+...++|++. .+...+|++.|.+............ ....+...+.
T Consensus 141 gviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~ 216 (337)
T d1usha2 141 AVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALP 216 (337)
T ss_dssp EEEEEECTTTTTSSSCCCCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSC
T ss_pred EeecccccccccccCcccccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCc
Confidence 55533110 011223333344455543 2456799999998754321110000 0122333334
Q ss_pred HcCCcEEEEccccCce
Q 009637 398 SYGVDIVFNGHVHAYE 413 (530)
Q Consensus 398 k~~VdlvlsGH~H~ye 413 (530)
..+||+++.||.|...
T Consensus 217 ~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 217 AGSLAMIVGGHSQDPV 232 (337)
T ss_dssp TTSSSEEECCSSCCBC
T ss_pred ccCceEEecCccCccc
Confidence 4589999999999753
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.03 E-value=7.2e-05 Score=73.40 Aligned_cols=180 Identities=20% Similarity=0.233 Sum_probs=87.6
Q ss_pred CeEEEEEccCCCCCC--------------hHHHHHHH----HhCCCC-EEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 198 PKRIAIVGDLGLTYN--------------TTCTINHM----SSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~--------------~~~~~~~l----~~~~pD-fvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
.++|++.+|+|.... ..+...++ .+.+++ +++.+||+.....+.+.
T Consensus 11 ~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~--------------- 75 (322)
T d3c9fa2 11 DINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDI--------------- 75 (322)
T ss_dssp SEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHS---------------
T ss_pred EEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhh---------------
Confidence 599999999996321 11222222 235676 56679999954321100
Q ss_pred ccccchHHHHHHHHHHHHhhhcCCe-EEccCCcccccccc-ccchHHHhhhcCCCCCCC--------C---CCCcceEEE
Q 009637 259 IHETYQPRWDYWGRFMQNLVSKVPI-MVVEGNHEIEAQAG-NQTFVAYSSRFAFPSEES--------G---SLSSFYYSF 325 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l~~~vP~-~~v~GNHD~~~~~~-~~~f~~y~~~f~~P~~~~--------~---~~~~~yYsf 325 (530)
+..+. ..+-++...+++ .+++||||+..... ...+......+..|.-.+ + .....|..+
T Consensus 76 ----~~~~G----~~~~~~mn~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~ 147 (322)
T d3c9fa2 76 ----TSPNG----LKSTPIFIKQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYF 147 (322)
T ss_dssp ----SSSTT----TTTHHHHTTSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEE
T ss_pred ----cccCC----hHHHHHHhccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEE
Confidence 00000 111222334555 67889999853211 112222333344442111 1 112345566
Q ss_pred EcC--cEEEEEEcccccCCC--------CHH---HHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHH
Q 009637 326 NAG--GIHFIMLGAYISYDK--------SGH---QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 392 (530)
Q Consensus 326 ~~G--~v~fI~Ldt~~~~~~--------~~~---Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l 392 (530)
..+ ++.++.+........ ... +..|+++.++ .+..-+|++.|-++-... .+.....
T Consensus 148 ~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~----~~~~~~~--- 216 (322)
T d3c9fa2 148 TTPIRGIRVMAFGFLFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW----GEFYQVH--- 216 (322)
T ss_dssp ECTTTCCEEEEEECCCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT----CHHHHHH---
T ss_pred EECCCcEEEEEEeeccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc----cccchHH---
Confidence 654 578888765432211 111 1234443333 355679999998764321 1111112
Q ss_pred HHHHHHc-CCc-EEEEccccC
Q 009637 393 EALLYSY-GVD-IVFNGHVHA 411 (530)
Q Consensus 393 ~~ll~k~-~Vd-lvlsGH~H~ 411 (530)
..+.... +++ ++|.||.|.
T Consensus 217 ~~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 217 QYLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp HHHHHHCTTSEEEEEECSSCC
T ss_pred HHHHHhCCCCCEEEecccccc
Confidence 2222333 344 699999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.76 E-value=0.00034 Score=67.72 Aligned_cols=174 Identities=20% Similarity=0.181 Sum_probs=91.5
Q ss_pred CeEEEEEccCCCCCC------------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCcccccCCCCCC
Q 009637 198 PKRIAIVGDLGLTYN------------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 258 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~------------------~~~~~~~l~~~~p-Dfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~ 258 (530)
.++|+..+|+|.... ....++++.+.++ -++|-+||+......
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~------------------ 63 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY------------------ 63 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH------------------
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh------------------
Confidence 478999999985421 1234566655455 477889999843210
Q ss_pred ccccchHHHHHHHHHHHHhhhcCCeEEccCCccccccccccchHHHhhhcCCCCCCC----------CCCCcceEEEEcC
Q 009637 259 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES----------GSLSSFYYSFNAG 328 (530)
Q Consensus 259 ~~~~y~~~wd~~~~~l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~f~~P~~~~----------~~~~~~yYsf~~G 328 (530)
... .+.....+.|+.+ -.=..++||||+.. +...+..+.....+|.-.+ ...-..|.-.+.+
T Consensus 64 -~~~--~~g~~~~~~~n~~---gyDa~~~GNHEfd~--G~~~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~ 135 (302)
T d2z1aa2 64 -FNQ--YRGLADRYFMHRL---RYRAMALGNHEFDL--GPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVG 135 (302)
T ss_dssp -HHH--HTTHHHHHHHHHT---TCCEEECCGGGGTT--CHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEET
T ss_pred -Hhh--hcchhHHHHHHhc---ccccccccchhhhc--ChhHHHHHhhhcccceeEeeeeccccccccCccceeEEEEEC
Confidence 000 0111222334332 23467899999963 2233344333333332100 1123346678888
Q ss_pred cEEEEEEc--ccc-----------cCCCCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHH
Q 009637 329 GIHFIMLG--AYI-----------SYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEAL 395 (530)
Q Consensus 329 ~v~fI~Ld--t~~-----------~~~~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~l 395 (530)
++++-++. +.. .+....+..++..+.|++ .+..-+|++.|.... +. ..+
T Consensus 136 g~kIgiiG~~t~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~--------~d-------~~l 197 (302)
T d2z1aa2 136 GERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYG--------ED-------LKL 197 (302)
T ss_dssp TEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH--------HH-------HHH
T ss_pred CeEEEEEecccccccccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcc--------hh-------hHH
Confidence 86655443 210 111223444555555554 344569999997531 11 123
Q ss_pred HHHc-CCcEEEEccccCceee
Q 009637 396 LYSY-GVDIVFNGHVHAYERS 415 (530)
Q Consensus 396 l~k~-~VdlvlsGH~H~yeR~ 415 (530)
..+. +||++++||.|..-..
T Consensus 198 a~~~~giD~ii~gh~h~~~~~ 218 (302)
T d2z1aa2 198 ARRLVGVQVIVGGHSHTLLGS 218 (302)
T ss_dssp HTTCSSCCEEEECSSCCCBSC
T ss_pred HhcCCCeeeeecCccceeecc
Confidence 3333 7999999999985543
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00059 Score=53.26 Aligned_cols=91 Identities=13% Similarity=0.141 Sum_probs=52.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-. +.+++.|+|.-....-|.. ...-.++|............. .. ..
T Consensus 3 ~P~~~~v~~~-~~~si~l~W~~p~~~~~~~-------~~~y~~~~~~~~~~~~~~~~~-----~~-------------~~ 56 (96)
T d1x5xa1 3 MPASPVLTKA-GITWLSLQWSKPSGTPSDE-------GISYILEMEEETSGYGFKPKY-----DG-------------ED 56 (96)
T ss_dssp CCCCCEEEEE-CSSEEEEECCCCSSCCSSS-------SCEEEEEECCSSSSCCCEEEE-----EE-------------SC
T ss_pred cCCCCEEEEe-cCCEEEEEEEeecccCcce-------EeeeEEEeeeccceeeeEEee-----cC-------------CC
Confidence 3555655433 3689999997633221110 112345555444333322211 10 11
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~ 191 (530)
..+.|+||+|+|.|.+||...+.. .+|+...|+|+|.
T Consensus 57 ~~~~v~~L~p~t~Y~~rV~A~n~~G~s~~S~~~~~~T~pd 96 (96)
T d1x5xa1 57 LAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 96 (96)
T ss_dssp SEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCcEeCCCCCEEEEeCcC
Confidence 246779999999999999754432 4778899999873
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.30 E-value=0.00038 Score=55.08 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=28.7
Q ss_pred EEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 190 (530)
++.|+||+|+|.|.+||...+ .+.+|+...|+|.|
T Consensus 56 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 56 RVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 567899999999999996433 23688999999986
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.96 E-value=0.0041 Score=47.75 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=47.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-.. .+++.|+|.-.... ...-.|+|....+......... . ..+-.
T Consensus 3 aP~~l~v~~~~-~~sv~v~W~~p~~~-----------~~~y~v~y~~~~~~~~~~~~~~-----~----------~~~~~ 55 (92)
T d1tdqa2 3 APKNLRVGSRT-ATSLDLEWDNSEAE-----------AQEYKVVYSTLAGEQYHEVLVP-----K----------GIGPT 55 (92)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEETTCCCCEEEEEE-----C----------CSSSE
T ss_pred cCcCCEEEEec-CCEEEEEEEecCCc-----------ccceEEEEEEcCCCcceeeEEE-----e----------cCCCe
Confidence 58888876543 78999999764321 1345677877654333222110 0 12235
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|+||+|+|.|.++|..-+
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~a~~ 77 (92)
T d1tdqa2 56 TKTTLTDLVPGTEYGVGISAVM 77 (92)
T ss_dssp EEEEECSCCTTCEEEEEEEEEE
T ss_pred eEEEECCccCCCEEEEEEEEEe
Confidence 6789999999999999997544
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0037 Score=48.23 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=53.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-.. ++++.|+|.-.... ...-.|+|............. ....
T Consensus 4 aP~n~~~~~~s-~~si~l~W~~p~~~-----------~~~Y~i~y~~~~~~~~~~~~~------------------~~~~ 53 (92)
T d1qg3a1 4 APQNPNAKAAG-SRKIHFNWLPPSGK-----------PMGYRVKYWIQGDSESEAHLL------------------DSKV 53 (92)
T ss_dssp CCEEEEEEECS-TTCEEEEEECCSSC-----------CCEEEEEEEETTSCGGGCEEE------------------EESS
T ss_pred cCCCCEEEEcc-CCEEEEEEEecCCC-----------ccceEEeeeeccccccEEEEe------------------cCCc
Confidence 58888777554 78999999753211 123457776655433222110 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 189 (530)
..+.|++|+|+|.|.+||..-+. +.+|+...++|.
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 54 PSVELTNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECC
T ss_pred cEEEECCCCCCcEEEEEEEEEeCCcCcCCCCCEEEEcC
Confidence 46778999999999999975332 357788888874
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.83 E-value=0.0017 Score=50.51 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=27.7
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
..+|++|+|+|.|.+||..-+. +.+|+...|+|.|
T Consensus 55 ~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 55 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPP 92 (93)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCC
T ss_pred EEEEcccceeeEEEEEEEEEECCcCcCCCCcEEEEeCC
Confidence 4568999999999999964332 3678889999976
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0051 Score=48.88 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=54.8
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.+... .+++++.|+|.-....-| + ...-.|.|....+...... ....+ .+
T Consensus 13 ~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g-------~-i~~Y~i~~~~~~~~~~~~~--~~~~~-------------~~ 69 (111)
T d1x5ka1 13 SPPKDVTVVSKEGKPKTIIVNWQPPSEANG-------K-ITGYIIYYSTDVNAEIHDW--VIEPV-------------VG 69 (111)
T ss_dssp SCCEEEEEEECSSCTTCEEEEEECCSCCSS-------C-CCEEEEEEESCSSSCTTTS--EEEEE-------------ST
T ss_pred CCCCCcEEEEecCCCCEEEEEEEccccCCC-------c-eeeeEEeeeecCCCCccee--EEEEe-------------CC
Confidence 45888877654 457899999985432111 1 1223456655443221110 00000 11
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
-.+...|++|+|+|.|.+||...+. +.+|+...|+|..
T Consensus 70 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 70 NRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp TCSEEEECSCCSSSEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred CeeEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEECCC
Confidence 2235678999999999999975432 3678888998854
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.77 E-value=0.0058 Score=48.84 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=54.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|+++.+.... +++|.|+|.-.....+.. ...=.|.|............ . .....
T Consensus 13 ~P~~l~~~~~~-~~sv~lsW~~P~~~~~~~-------i~~Y~v~~~~~~~~~~~~~~--------~---------~~~~~ 67 (107)
T d1x5fa1 13 APRDVVASLVS-TRFIKLTWRTPASDPHGD-------NLTYSVFYTKEGIARERVEN--------T---------SHPGE 67 (107)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSCSSCC-------SSEEEEEEEETTCCCCEEEE--------C---------SSTTC
T ss_pred CCCccEEEEec-CCEEEEEEECCccCCCCc-------eEEEEEEEEeCCCCceEEEE--------E---------eCCCc
Confidence 68888776554 789999997632111100 11234666554433222110 0 01123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p 190 (530)
..+.|++|+|+|+|.+||...+.. .+|....++|.|
T Consensus 68 ~~~~~~~L~p~t~Y~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 68 MQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCCCcCCCCCEEEECCC
Confidence 568899999999999999765433 356778888865
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0049 Score=48.11 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=53.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.-..+.++|.|+|.-... +....=.|.|....+....... ... ++-.
T Consensus 4 PP~~l~v~~~~~ts~i~v~W~~p~~----------~~i~~Y~v~y~~~~~~~~~~~~---~~~-------------~~~~ 57 (94)
T d1fnfa1 4 PPTNLHLEANPDTGVLTVSWERSTT----------PDITGYRITTTPTNGQQGNSLE---EVV-------------HADQ 57 (94)
T ss_dssp CCEEEEEEECSSSSCEEEEEECCSC----------SSCCEEEEEEEETTTCSSCCEE---EEE-------------CTTC
T ss_pred cCcCcEEEEecCCCEEEEEeeCCCC----------CCeeEEEEEEEEecccCceEEE---EEe-------------CCCc
Confidence 5899988765556779999975321 1112334677755432221110 000 1123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~~~F~T~p 190 (530)
..+.|+||+|||.|..+|..-+..+.|...+.+..|
T Consensus 58 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~p~s~t~~p 93 (94)
T d1fnfa1 58 SSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIP 93 (94)
T ss_dssp CEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCCEeCCEEEEEEc
Confidence 478899999999999999765444566555544433
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.69 E-value=0.0027 Score=50.04 Aligned_cols=88 Identities=15% Similarity=0.224 Sum_probs=53.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.-.. .+++.|+|......-| + ...=.|+|............ + ....
T Consensus 6 ~p~~~~~~~~s-~~si~v~W~~P~~~~g-------~-i~~Y~v~y~~~~~~~~~~~~-----~-------------~~~~ 58 (98)
T d1x5la1 6 QVVVIRQERAG-QTSVSLLWQEPEQPNG-------I-ILEYEIKYYEKDKEMQSYST-----L-------------KAVT 58 (98)
T ss_dssp CCCCEECSCBC-SSCEEEEECCCSCCCS-------C-CCEEEEEEEESSSCCSSCEE-----E-------------EESS
T ss_pred CCCceEEEecc-CCEEEEEEECCCCCCC-------C-EEEEEEEeecccccceeeEE-----e-------------cCCc
Confidence 46677765444 7899999986432111 1 12234777665433222110 0 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 189 (530)
+...|+||+|+|+|.+||...+. +.||+...|+|.
T Consensus 59 ~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 59 TRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp SEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECC
T ss_pred eEEEECCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEcC
Confidence 46778999999999999964332 367889999985
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0026 Score=49.36 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=29.1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~ 191 (530)
..+.|++|+|+|.|.+||...+. +.+|+...|+|+|.
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~d 95 (95)
T d2djsa1 56 NTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTD 95 (95)
T ss_dssp SEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCS
T ss_pred cEEEEeecCCccEEEEEEEEEcCCCCCCCCCCEEEEeCCC
Confidence 35778999999999999975432 25788889999873
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.51 E-value=0.029 Score=51.84 Aligned_cols=190 Identities=14% Similarity=0.148 Sum_probs=105.5
Q ss_pred eEEEEEccCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~---~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
+||+++||.=..... ...+..+. .+.|||+..|..+- .|.... + +.+.+++
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa------~G~Git---------------~---~~~~~l~- 54 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIR-PQFDFVIVNMENSA------GGFGMH---------------R---DAARGAL- 54 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHG-GGCSEEEEECTBTT------TTSSCC---------------H---HHHHHHH-
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHH-hhCCEEEECCccCC------CCcCCC---------------H---HHHHHHH-
Confidence 589999997433211 22344443 46899999999983 333210 1 1222222
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhh----hcCCCCCC--CCCCCcceEEEEcCcEEEEEEc--ccccCCCCHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS----RFAFPSEE--SGSLSSFYYSFNAGGIHFIMLG--AYISYDKSGHQ 347 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~----~f~~P~~~--~~~~~~~yYsf~~G~v~fI~Ld--t~~~~~~~~~Q 347 (530)
...+- ..+.|||=+.. +....|.. +..-|.+- .+..+..|+.++..+.++.+++ ....-.+...=
T Consensus 55 --~~GvD-viT~GNH~wdk----kei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~P 127 (255)
T d1t70a_ 55 --EAGAG-CLTLGNHAWHH----KDIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNP 127 (255)
T ss_dssp --HHTCS-EEECCTTTTSS----TTHHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCH
T ss_pred --HcCCc-EEEcCchhhcc----hhHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCH
Confidence 12444 46789998752 33334432 22234331 2345667888888876666665 33222222333
Q ss_pred HHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCC
Q 009637 348 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 427 (530)
Q Consensus 348 ~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G 427 (530)
.+-+++.|++. +.+.+||=+|.=.- ....+| -.+.+-+|.+|+.=|+|.-.- +.++=|+|
T Consensus 128 F~~~d~~l~~~---~~~~i~VDfHaEaT-----------SEK~A~-g~~ldGrvsav~GTHTHV~Ta-----D~rIlp~G 187 (255)
T d1t70a_ 128 FRTMDALLERD---DLGTVFVDFHAEAT-----------SEKEAM-GWHLAGRVAAVIGTHTHVPTA-----DTRILKGG 187 (255)
T ss_dssp HHHHHHHTTCS---SCCEEEEEEECSCH-----------HHHHHH-HHHHTTSSSEEEEESSCSCBS-----CCEEETTT
T ss_pred HHHHHHHHhhc---CCCeEEEEccchhH-----------HHHHHH-HhhhcCcEEEEEecCcccccc-----cceEecCC
Confidence 44566666653 44568888884221 112222 344566899999999996332 22223689
Q ss_pred cEEEEe-CCCccccc
Q 009637 428 PVHITI-GDGGNLEK 441 (530)
Q Consensus 428 ~vyIv~-G~gG~~e~ 441 (530)
+.|++- |.-|..++
T Consensus 188 Tay~TDvGMtG~~~S 202 (255)
T d1t70a_ 188 TAYQTDAGFTGPHDS 202 (255)
T ss_dssp EEEESCCCCBEESSS
T ss_pred cEEEecCccccchhh
Confidence 999974 66776543
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.49 E-value=0.0062 Score=48.85 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=45.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.- -+.+++.|+|.-. ..-|.. ...=.|+|............... . +..
T Consensus 12 ~~P~~~~v~~-~~~~sv~l~W~p~-~~~g~~-------I~~Y~v~~~~~~~~~~~~~~~~~--~-------------~~~ 67 (108)
T d1x4za1 12 EAPDRPTIST-ASETSVYVTWIPR-GNGGFP-------IQSFRVEYKKLKKVGDWILATSA--I-------------PPS 67 (108)
T ss_dssp CCCCCCEEEE-CCSSEEEEECCCC-CCTTSC-------CCEEEEEEEESSSCCCCEEEEEE--E-------------CTT
T ss_pred ccCCCCEEEE-ccCCEEEEEEECC-CCCCCc-------cEEEEEEEEecCCCCceEEEEEe--e-------------cCC
Confidence 3567666653 3478999999432 211111 12234667655433222211110 0 111
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
...+.|+||+|+|.|.|||...+..++|
T Consensus 68 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s 95 (108)
T d1x4za1 68 RLSVEITGLEKGISYKFRVRALNMLGES 95 (108)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred ccEEEECCCCCCCEEEEEEEEECCCcCC
Confidence 2356789999999999999765433333
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0055 Score=48.10 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=54.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcce-EEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNH-EATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~-~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+++.--. .+++.|+|......-+. .....-.|+|....+.... ... ..+..
T Consensus 5 pP~~l~v~~~~-~~s~~l~W~~p~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~-----------------~~~~~ 60 (104)
T d2b5ib2 5 APISLQVVHVE-THRCNISWEISQASHYF------ERHLEFEARTLSPGHTWEEAPLL-----------------TLKQK 60 (104)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSCCGGG------TTCEEEEEEEECTTSCSTTSCCE-----------------EECSC
T ss_pred CCCCcEEEEEe-CCEEEEEEccccccccc------cceeEEEEEEecccccceeeeEE-----------------ecCCC
Confidence 58999887765 68999999875321110 0001234556555432111 100 00112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC----C---CCCCceeEEEcCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS----I---PAMSDVYYFRTLP 190 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~----~---~~~S~~~~F~T~p 190 (530)
-..+.|+||+|+|.|.+||.... . ..||+...|+|.|
T Consensus 61 ~~~~~i~~L~p~t~Y~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 61 QEWICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred cEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 34578899999999999986421 1 2467779999976
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=96.47 E-value=0.054 Score=49.75 Aligned_cols=190 Identities=18% Similarity=0.259 Sum_probs=103.1
Q ss_pred eEEEEEccCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHHHH
Q 009637 199 KRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 275 (530)
Q Consensus 199 ~rf~v~gD~g~~~~~---~~~~~~l~~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~l~ 275 (530)
+||+++||.=..... ...+.++. .+.|||+..|..+- .|.... +. .+.+++
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa------~G~Git---------------~k---~~~~L~- 54 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIR-DRYDLVIANGENAA------RGKGLD---------------RR---SYRLLR- 54 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHG-GGCSEEEEECTTTT------TTSSCC---------------HH---HHHHHH-
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHH-hhCCEEEEeeeccC------CCcCCC---------------HH---HHHHHH-
Confidence 589999998433211 22233443 46899999999973 333210 11 121222
Q ss_pred HhhhcCCeEEccCCccccccccccchHHHhhh--cCCCCCC-CCCCCcceEEEEcCcEEEEEEcc--cccCCCCHHHHHH
Q 009637 276 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--FAFPSEE-SGSLSSFYYSFNAGGIHFIMLGA--YISYDKSGHQYKW 350 (530)
Q Consensus 276 ~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~--f~~P~~~-~~~~~~~yYsf~~G~v~fI~Ldt--~~~~~~~~~Q~~W 350 (530)
...+- ..+.|||=+... ....|.+. .--|.+- .+..+..|+.|+.++.++.++|- ...-...+.=.+-
T Consensus 55 --~~GVD-vIT~GNH~wdkk----ei~~~i~~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~ 127 (252)
T d2z06a1 55 --EAGVD-LVSLGNHAWDHK----EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRA 127 (252)
T ss_dssp --HHTCC-EEECCTTTTSCT----THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHH
T ss_pred --HhCCC-EEEcCcccccch----hhhhhhccccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHH
Confidence 22444 467899987532 22223322 2223332 23345668888888877766663 2211222222333
Q ss_pred HHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccCccCCCCcEE
Q 009637 351 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 430 (530)
Q Consensus 351 L~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~~~~~~G~vy 430 (530)
+++.|++ .+.+.+||=+|.=.- ....+| -.+.+-+|.+|+.=|+|.-.- +..+=|+|+.|
T Consensus 128 ~d~~~~~---~~~~~i~VDfHaEaT-----------SEK~A~-g~~ldGrvsavvGTHTHV~Ta-----D~rILp~GTay 187 (252)
T d2z06a1 128 LDRLLEE---EKADYVLVEVHAEAT-----------SEKMAL-AHYLDGRASAVLGTHTHVPTL-----DATRLPKGTLY 187 (252)
T ss_dssp HHHHHHH---CCCSEEEEEEECSCH-----------HHHHHH-HHHHBTTBSEEEEESSCSCBS-----CCEECTTSCEE
T ss_pred HHHHHhh---cCccEEEEEcccchh-----------hhheee-eEecCCCEEEEEecCcccccc-----ccEEecCCeEE
Confidence 4444444 245668888884221 112222 344566899999999996332 22224689999
Q ss_pred EEe-CCCccccc
Q 009637 431 ITI-GDGGNLEK 441 (530)
Q Consensus 431 Iv~-G~gG~~e~ 441 (530)
++- |.-|..++
T Consensus 188 iTDvGM~G~~~S 199 (252)
T d2z06a1 188 QTDVGMTGTYHS 199 (252)
T ss_dssp ESCCCCBEESSS
T ss_pred EccCccccchhh
Confidence 974 66776544
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.44 E-value=0.0068 Score=47.04 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=46.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.--. ++++.|+|.......+.. ...=.|+|............. .. .+..
T Consensus 9 ~P~~~~v~~~s-~tsv~l~W~~P~~~~~~~-------i~gY~i~y~~~~~~~~~~~~~---~~-------------~~~~ 64 (95)
T d2ibga1 9 VPELLEIEEYS-ETAVVLHWSLASDADEHL-------ITGYYAYYRPSSSAGEYFKAT---IE-------------GAHA 64 (95)
T ss_dssp CCEECCCBCCS-SSCEEEEEECCTTCCGGG-------CCEEEEEEEETTCCSCCEEEE---EE-------------CTTC
T ss_pred CCcCeEEEEeC-CCEEEEEEEeeeeccCCc-------ccccceeEeeeeecceeeeee---cc-------------CCce
Confidence 47776654433 689999997532211100 012357777654432211100 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
+...|+||+|+|.|.+||..-+..+.|
T Consensus 65 ~~~~i~~L~p~t~Y~~~V~A~n~~G~s 91 (95)
T d2ibga1 65 RSFKIAPLETATMYEFKLQSFSAASAS 91 (95)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSCBC
T ss_pred eEEEEeeccCCeEEEEEEEEEeCCccC
Confidence 467899999999999999865533444
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0041 Score=48.66 Aligned_cols=93 Identities=22% Similarity=0.218 Sum_probs=52.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.+.--. +++|.|+|.......+.... ....-.|+|...+........ . ...
T Consensus 3 ~pP~~v~~~~~s-~tsi~v~W~~p~~~~~~~~~----~~~~y~v~~~~~~~~~~~~~~-----~-------------~~~ 59 (100)
T d1x5ja1 3 MPPVGVQASILS-HDTIRITWADNSLPKHQKIT----DSRYYTVRWKTNIPANTKYKN-----A-------------NAT 59 (100)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECTTSCSSSCCC----SSCEEEEEECBSSSSSCCCEE-----C-------------CBC
T ss_pred CCCcCeEEEEec-CCEEEEEEcCCcccccccee----eEEEEEEEeeecCCCcceeEe-----c-------------CCC
Confidence 348888776544 89999999864221111100 011234556555433221110 0 001
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 189 (530)
...++|+||+|+|.|.+||...+. +.+|....++|.
T Consensus 60 ~~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 60 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECC
T ss_pred ccEEEECCCCCCCEEEEEEEEEeCCcCcCCCCeEEEEec
Confidence 124678999999999999974332 367777777774
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.41 E-value=0.0066 Score=47.71 Aligned_cols=35 Identities=17% Similarity=0.313 Sum_probs=27.8
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
++.|++|+|+|.|.|||...+. +.+|+...++|+|
T Consensus 59 ~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 59 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAP 96 (97)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEcCCCCCEEEEEEEEEecCCeEcCCcCCCeEEeCc
Confidence 4578999999999999975443 3577888888876
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0066 Score=47.60 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=53.6
Q ss_pred CCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|.++.|+... .++++.|+|.-... .. ...=.|+|....+...... .. .++-
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~---~~-------i~~Y~i~y~~~~~~~~~~~----~~-------------v~~~ 54 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQP---SH-------ISKYILRWRPKNSVGRWKE----AT-------------IPGH 54 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSS---SC-------EEEEEEEEEETTCSSCCEE----EE-------------ECSS
T ss_pred cCcccEEEEccCCCCEEEEEeecccc---cc-------eeEEEEEEeeccccceeee----ec-------------cCCC
Confidence 48888887765 46899999986421 00 1223566776543322110 00 1223
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 189 (530)
...+.|+||+|||.|..+|..-+..+.|+ ...|+|.
T Consensus 55 ~~~~~l~gL~P~t~Y~v~v~av~~~G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 55 LNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTT 92 (93)
T ss_dssp CCEEEECSCCSSEEEEEEEEEEESSSCEEEEEEEEEEC
T ss_pred ccEEEECCcccCcEEEEEEEEEeCCCccCcEEEEEEec
Confidence 45779999999999999997544334443 5667764
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.33 E-value=0.015 Score=45.92 Aligned_cols=91 Identities=12% Similarity=0.044 Sum_probs=52.7
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+....+++.+.|+|.......+. ....=.|+|........... ... ..-
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~----~~~-------------~~~ 61 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMT-------SHIRYEVDVSAGNGAGSVQR----VEI-------------LEG 61 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCG-------GGEEEEEEEEEC-CCCEEEE----EEE-------------CTT
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccc-------eEEEEEEEEecCCCCCceEE----Eee-------------cCC
Confidence 358999999888788899999874321110 00122566665543222111 110 001
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC-----CC---CCCceeEEEc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS-----IP---AMSDVYYFRT 188 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~-----~~---~~S~~~~F~T 188 (530)
-..+.|.+|+|+|+|.+||.... .+ .||+..+++|
T Consensus 62 ~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~v~~~t 104 (105)
T d1erna2 62 RTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEPVSLLT 104 (105)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCCEEEEC
T ss_pred ccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCCEEeeC
Confidence 13577899999999999996521 11 4666677776
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.31 E-value=0.0077 Score=46.15 Aligned_cols=77 Identities=19% Similarity=0.146 Sum_probs=47.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.--. .+++.|+|...... ...=.|+|............ +. .-.
T Consensus 3 ~P~~l~v~~v~-~~s~~l~W~~~~~~-----------~~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 52 (88)
T d1qr4a2 3 SPKGISFSDIT-ENSATVSWTPPRSR-----------VDSYRVSYVPITGGTPNVVT-----VD-------------GSK 52 (88)
T ss_dssp CCSCEEEESCC-SSCEEEEECCCSSC-----------CSEEEEEEEETTCCCCEEEE-----EE-------------TTC
T ss_pred CCcceEEEEec-CCEEEEEEEcccEe-----------eceEEEEEEeccCCceEEEE-----ec-------------CCc
Confidence 47887776554 78999999754311 12346777776543332221 10 112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|+||+|+|+|.++|..-+..+.|
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 79 (88)
T d1qr4a2 53 TRTKLVKLVPGVDYNVNIISVKGFEES 79 (88)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCc
Confidence 467899999999999999765433334
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.28 E-value=0.014 Score=44.40 Aligned_cols=83 Identities=17% Similarity=0.091 Sum_probs=49.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.--. .+++.|+|.-.... ...=.|.|........ .. .. +.-.
T Consensus 2 aP~~l~v~~~t-~~sv~v~W~~p~~~-----------~~~Y~v~~~~~~~~~~-~~-----~~-------------~~~~ 50 (87)
T d1qr4a1 2 NPKDLEVSDPT-ETTLSLRWRRPVAK-----------FDRYRLTYVSPSGKKN-EM-----EI-------------PVDS 50 (87)
T ss_dssp CCEEEEEESCC-SSEEEEEEECCSSC-----------CSEEEEEEECTTCCEE-EE-----EE-------------CTTC
T ss_pred cCcCcEEEEec-CCEEEEEEECCCCC-----------cceeEEEeecCCccee-EE-----eC-------------CCCc
Confidence 58888876443 78999999764321 1234677776543211 10 00 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 188 (530)
..+.|+||+|+|+|.++|..-...+.|+ ..+++|
T Consensus 51 ~~~~~~~L~p~t~Y~v~V~a~~~~~~s~~~~~~~~T 86 (87)
T d1qr4a1 51 TSFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGST 86 (87)
T ss_dssp SEEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEEC
T ss_pred CEEEECCCCcCCEEEEEEEEEcCCCCccCEEEEEEc
Confidence 4678999999999999997544333333 334444
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.26 E-value=0.012 Score=45.39 Aligned_cols=88 Identities=22% Similarity=0.191 Sum_probs=51.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+. ..+.+++.|+|.-... -|.. ...=.|+|....+....... .....
T Consensus 3 ~P~~~~~~-~~~~~sv~l~W~~p~~-~~~~-------I~~Y~i~~~~~~~~~~~~~~------------------~~~~~ 55 (93)
T d2vkwa2 3 APKLEGQM-GEDGNSIKVNLIKQDD-GGSP-------IRHYLVRYRALSSEWKPEIR------------------LPSGS 55 (93)
T ss_dssp CCEEEEEE-CTTSSCEEEEEECCCC-TTSC-------CCEEEEEEEETTSCCCCCEE------------------ECTTC
T ss_pred CCccCEeE-EcCCCEEEEEeeCCCC-CcCc-------eEEEEEEeeecCcceeeeee------------------ccCCc
Confidence 47666553 3346899999987542 1111 12335677665543221110 01112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 189 (530)
.++.|++|+|+|.|.+||.+-+..+.|+ ...|+|.
T Consensus 56 ~~~~i~~L~p~t~Y~~~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 56 DHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred eEEEEeccccceEEEEEEEEEcCCCCcCCEeEEEEec
Confidence 3578899999999999997654334443 5677774
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.25 E-value=0.016 Score=45.82 Aligned_cols=80 Identities=16% Similarity=0.098 Sum_probs=46.9
Q ss_pred CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEEEEEeCCCCCC
Q 009637 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEPN 165 (530)
Q Consensus 86 ~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P~ 165 (530)
+++++.|+|.-....-|. ...=.|+|....+........ . ..+-.+...|++|+|+
T Consensus 19 ~~~~v~l~W~pp~~~~~~--------~~~y~i~y~~~~~~~~~~~~~---~-------------~~~~~~~~~i~~L~p~ 74 (105)
T d2d9qb2 19 QAGCLQLSWEPWQPGLHI--------NQKCELRHKPQRGEASWALVG---P-------------LPLEALQYELCGLLPA 74 (105)
T ss_dssp CCSCEEEEEECCGGGTTS--------CEEEEEEEEESSSCCCCEEEE---E-------------ECSCEEEEEECSCCSC
T ss_pred CCCeEEEEEcCCCCCCce--------eEEEEEEEEecCCccceeeee---c-------------ccCCcceeEEecccCC
Confidence 478999999864322110 123457777654332222111 0 1223566789999999
Q ss_pred CEEEEEEeeCC---C---CCCCceeEEEcC
Q 009637 166 NKYYYQCGDPS---I---PAMSDVYYFRTL 189 (530)
Q Consensus 166 T~Y~Yrvg~~~---~---~~~S~~~~F~T~ 189 (530)
|.|.+||...+ . ..||...+++|.
T Consensus 75 t~Y~frVra~n~~g~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 75 TAYTLQIRCIRWPLPGHWSDWSPSLELRTT 104 (105)
T ss_dssp CCEEEEEEEEECSSCCCCCCCCCCEEECCC
T ss_pred eEEEEEEEEEeCCCCCCCcCCCCCEEEeCC
Confidence 99999995421 1 146667777763
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.22 E-value=0.017 Score=44.44 Aligned_cols=84 Identities=18% Similarity=0.227 Sum_probs=50.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-- +++++.|+|...... ...=.|.|....... ... .. +...
T Consensus 4 ~P~~l~~~~~-~~~sv~l~W~~p~~~-----------~~~Y~v~~~~~~~~~-~~~-----~~-------------~~~~ 52 (93)
T d2cuma1 4 APRDLEAKEV-TPRTALLTWTEPPVR-----------PAGYLLSFHTPGGQT-QEI-----LL-------------PGGI 52 (93)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEECTTSCE-EEE-----EE-------------CSSC
T ss_pred cCCCCEEEEe-CCCEEEEEEEccccc-----------cccEEEEEEcccccc-EEE-----EE-------------CCCc
Confidence 4777776533 378999999764321 123567777654321 111 11 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~ 189 (530)
..+.|+||+|+|.|.++|..-+..+.|+ .-.|+|.
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~tT~ 89 (93)
T d2cuma1 53 TSHQLLGLFPSTSYNARLQAMWGQSLLPPVSTSFTTG 89 (93)
T ss_dssp SEEEECSCCTTCEEEEEEEEEBTTBCCCCEEEEEECC
T ss_pred cEEEEeCccCCCEEEEEEEEEeCCCCCCCEEEEEEeC
Confidence 3578999999999999997654334443 3456664
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.21 E-value=0.015 Score=44.43 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.+++++-- +.+++.|+|.-.... ...-.|.|....+...... ... ++-.
T Consensus 4 ~P~~l~v~~~-s~~s~~l~W~~p~~~-----------~~~y~v~~~~~~~~~~~~~----~~~-------------~~~~ 54 (90)
T d1tena_ 4 APSQIEVKDV-TDTTALITWFKPLAE-----------IDGIELTYGIKDVPGDRTT----IDL-------------TEDE 54 (90)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCSSC-----------CSEEEEEEEETTCTTCCEE----EEE-------------ETTC
T ss_pred CCCCcEEEEe-cCCEEEEEEEeCceE-----------eccEEEEEEEcCCCceeEE----EEe-------------cCCc
Confidence 5888888743 478999999753211 1235677776544322211 001 1122
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|.||+|+|.|.++|..-+..+.|
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 81 (90)
T d1tena_ 55 NQYSIGNLKPDTEYEVSLISRRGDMSS 81 (90)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred ceeeEeeecCCCEEEEEEEEEeCCCEe
Confidence 467899999999999999754433333
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0089 Score=45.68 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=47.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.--. .+++.|+|.-.... ...=.|+|......... ... ..+.-.
T Consensus 3 aP~nl~v~~~~-~~s~~l~W~~p~~~-----------i~~Y~i~~~~~~~~~~~--------~~~---------~~~~~~ 53 (89)
T d1fnha3 3 APSNLRFLATT-PNSLLVSWQPPRAR-----------ITGYIIKYEKPGSPPRE--------VVP---------RPRPGV 53 (89)
T ss_dssp CCEEEEEEEEE-TTEEEEEEECCSSC-----------CSEEEEEEECTTSCCEE--------CTT---------CCCTTC
T ss_pred cCcCCEEEEec-CCEEEEEEeCCCcC-----------CceEEEEEeeccCCccE--------EEE---------EcCCCc
Confidence 48888776544 78999999753211 12335677665432110 000 001123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 182 (530)
..+.|+||+|+|.|.+||..-+..+.|+
T Consensus 54 ~~~~~~~L~p~t~Y~~~V~a~n~~g~S~ 81 (89)
T d1fnha3 54 TEATITGLEPGTEYTIYVIALKNNQKSE 81 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEESSSCEEE
T ss_pred cEEEEEeeeCCCEEEEEEEEEcCCCEeC
Confidence 4678899999999999998655334443
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.12 E-value=0.0088 Score=47.05 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=28.5
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
.+.|+||+|+|.|++||...+. +.+|+.-.|+|.|
T Consensus 63 ~~~i~~L~p~t~Y~frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 63 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEecCCCCCeEEEEEEEEEeCCcCcCCCCceeEEeCC
Confidence 5788999999999999975432 3678888999987
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.018 Score=43.91 Aligned_cols=85 Identities=16% Similarity=0.070 Sum_probs=48.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.++--. ++++.|+|.-.... ...-.++|............ .. ..-.
T Consensus 2 pP~~l~~~~v~-~~si~l~W~~p~~~-----------~~~~~i~~~~~~~~~~~~~~---~~--------------~~~~ 52 (90)
T d1fnha1 2 APTDLKFTQVT-PTSLSAQWTPPNVQ-----------LTGYRVRVTPKEKTGPMKEI---NL--------------APDS 52 (90)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSCSCCCEE---EE--------------CTTC
T ss_pred CCCCEEEEEec-CCEEEEEEEcccee-----------ccceEEEEEeeeCCCceEEE---Ee--------------CCCC
Confidence 47888876544 89999999764321 12345666654432221110 00 0011
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 188 (530)
-+..|+||+|+|+|++||..-+..+.|. .-.|+|
T Consensus 53 ~~~~i~~L~p~t~Y~~~V~a~n~~g~s~~~~~~~~T 88 (90)
T d1fnha1 53 SSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTT 88 (90)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eEEEEecccCceEEEEEEEEEeCCCCcCCEeEEEEc
Confidence 3578999999999999997544333332 334554
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.07 E-value=0.02 Score=44.61 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+++..-. .++|.|+|......... ++ ...=.|.|....+.......-.. ..+.
T Consensus 3 ~~P~~~~~~~~s-~tsi~v~W~~~~~~~~~-----~~-i~~Y~v~y~~~~~~~~~~~~~~~---------------~~~~ 60 (101)
T d1x4ya1 3 AGPYITFTDAVN-ETTIMLKWMYIPASNNN-----TP-IHGFYIYYRPTDSDNDSDYKKDM---------------VEGD 60 (101)
T ss_dssp SCCEEEEEECSS-SSCEEEEEECCCTTSCC-----CC-CCEEEEEECCTTSCSGGGCCCEE---------------EETT
T ss_pred CCCcccEEEEEc-CCEEEEEEecCcccccc-----cc-eEEEEEEeeeccceeeeeeeEEE---------------EcCC
Confidence 357888776554 78999999864322110 00 01123666655432221110000 0112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTL 189 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~ 189 (530)
.....|.+|+|+|.|.+||..-+ .+.+|+...++|.
T Consensus 61 ~~~~~i~~L~p~t~Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 61 RYWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp CCEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECC
T ss_pred eeEEEEcCCCCCCEEEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 23456899999999999997543 2368888999885
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.06 E-value=0.015 Score=44.53 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=23.7
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC----CCCCceeEEEc
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI----PAMSDVYYFRT 188 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T 188 (530)
...++||+|+|+|.|||..-+. ..+|+...++|
T Consensus 52 ~~~~~~L~p~t~Y~~~V~A~n~~G~~s~~S~~v~vtT 88 (88)
T d1k85a_ 52 TATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCcCCCCcCEEEEC
Confidence 3568999999999999974321 24566666665
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.05 E-value=0.0078 Score=47.37 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=50.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-. +.+++.|+|..... | + ...=.|+|............ ... .
T Consensus 13 ~P~~~~~~~~-~~~si~l~W~~p~~--~-------~-i~~Y~i~y~~~~~~~~~~~~-----------------~~~--~ 62 (102)
T d1x5za1 13 QPLNFKAEPE-SETSILLSWTPPRS--D-------T-IANYELVYKDGEHGEEQRIT-----------------IEP--G 62 (102)
T ss_dssp CCEEEEEECS-SSSEEEEEEECCSC--C-------C-CCEEEECBEESSSCCCBCCE-----------------ECS--S
T ss_pred CCCCeEEEEc-cCCEEEEEEECCCC--C-------C-ccceEEEEEeCCCCceEEEE-----------------cCC--c
Confidence 5888887643 47899999976321 1 0 11223445443322111000 001 1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p 190 (530)
....|+||+|+|.|.+||..-+. +.+|+...++|+.
T Consensus 63 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 63 TSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp SEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCC
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCEeCCCCCEEEEcCC
Confidence 24578999999999999975332 2467788888863
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0092 Score=47.08 Aligned_cols=86 Identities=20% Similarity=0.171 Sum_probs=50.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-.. ++++.|+|......-| + ...=.|+|...+......... + .
T Consensus 13 ~P~~l~v~~~s-~~si~l~W~~P~~~~g-------~-i~~Y~v~~~~~~~~~~~~~~~------------------~--~ 63 (103)
T d1x5ga1 13 PAPNLRAYAAS-PTSITVTWETPVSGNG-------E-IQNYKLYYMEKGTDKEQDVDV------------------S--S 63 (103)
T ss_dssp CCSSCEEEEEE-TTEEEEECCCCSCCSS-------C-CSEEEEEEEETTCCCCCCEEE------------------C--S
T ss_pred cCCCcEEEEcc-CCEEEEEEECCcCCCc-------c-EEEEEEEEEeCCCceeEEEec------------------c--c
Confidence 56777665433 6899999975322111 1 012236666554432222110 0 1
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 189 (530)
..+.|+||+|+|.|.++|..-+. +.+|+...++|+
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 64 HSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECC
T ss_pred cEEecCCCCCCCEEEEEEEEEcCCcCcCCCCCEEEEcC
Confidence 24678999999999999975332 246777778875
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.013 Score=45.91 Aligned_cols=87 Identities=14% Similarity=0.059 Sum_probs=51.4
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++++.-- +++++.|+|...... ...=.|+|....+... .. .. .+-.
T Consensus 3 ~P~~l~~~~~-t~~si~l~W~~p~~~-----------i~~Y~v~~~~~~~~~~-~~-----~~-------------~~~~ 51 (102)
T d2cuha1 3 GPTQLRALNL-TEGFAVLHWKPPQNP-----------VDTYDIQVTAPGAPPL-QA-----ET-------------PGSA 51 (102)
T ss_dssp SCEEEECCCC-SSSCEEEEEECCSSC-----------CSEEEEEEECSSSCCE-EE-----EE-------------ETTC
T ss_pred CCCccEEEEe-CCCEEEEEEEeeecc-----------ceeeEEEEEeccccce-ee-----ee-------------eeee
Confidence 5777777533 378999999764311 1234566765443211 11 00 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC--ceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS--DVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S--~~~~F~T~p~~ 192 (530)
..+.|+||+|+|.|.++|..-...+.| ....|+|.+.+
T Consensus 52 ~~~~l~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~T~~~~ 91 (102)
T d2cuha1 52 VDYPLHDLVLHTNYTATVRGLRGPNLTSPASITFTTGLEA 91 (102)
T ss_dssp SEEEECSCCSSSEEEEEEEEEETTEECCCEEEEEESCCCC
T ss_pred eeEEEccEEeeEEEEEEEEEEeCCCCcCCEEEEEECCCCC
Confidence 367799999999999999754333333 35678887643
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.00 E-value=0.014 Score=46.07 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=54.9
Q ss_pred CCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 73 GFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 73 ~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
...|..+.+... +.+++.|+|......... ++. ..=.|+|............ .. ......
T Consensus 9 ~~pP~~v~v~~~-~~~si~l~W~~p~~~~~~-----~~i-~~y~v~~~~~~~~~~~~~~-----~~--------~~~~~~ 68 (109)
T d1va9a1 9 DGPPMDVTLQPV-TSQSIQVTWKAPKKELQN-----GVI-RGYQIGYRENSPGSNGQYS-----IV--------EMKATG 68 (109)
T ss_dssp SSCCEEEEEEEC-SSSEEEEEEECCCSSTTC-----SCC-CEEEEEEEESSTTSCCSCB-----CC--------BCCCCS
T ss_pred CCCCcCcEEEEe-cCCEEEEEEcCCCCCCCC-----CcE-EEEEEEEeeccccccceee-----ee--------EEecCC
Confidence 346888887654 478999999874321100 010 1224556554332221100 00 001123
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTL 189 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~ 189 (530)
...++.|++|+|+|.|.+||..-+. +.+|+...|+|+
T Consensus 69 ~~~~~~i~~L~p~t~Y~~~V~a~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 69 DSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTL 108 (109)
T ss_dssp SEEEEEEESCCSSCCEEEEEEEEETTEECCCCCCEECCCC
T ss_pred CeeEEEECCCCcceEEEEEEEEEcCCcCCCCCCCEEEEcC
Confidence 4567889999999999999964332 257777777774
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.99 E-value=0.018 Score=43.86 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=48.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.++-- +++++.|+|.-.... ...=.|+|............ .. ++-.
T Consensus 3 ~P~~l~v~~v-t~~sv~l~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~~----~v-------------~~~~ 53 (89)
T d1fnfa3 3 SPTGIDFSDI-TANSFTVHWIAPRAT-----------ITGYRIRHHPEHFSGRPRED----RV-------------PHSR 53 (89)
T ss_dssp CCEEEEEESC-CSSEEEEEEECCSSC-----------CSEEEEEEECSCCSSCCEEE----EE-------------ETTC
T ss_pred cCcCCEEEEe-cCCEEEEEEEeCCCE-----------EeeEEEEEEECCCCCceEEE----EE-------------CCCc
Confidence 4888887743 378999999753211 12345788776544332110 00 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
.++.|++|+|+|.|.++|..-+..+.|
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 80 (89)
T d1fnfa3 54 NSITLTNLTPGTEYVVSIVALNGREES 80 (89)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEECCCcccCEEEEEEEEEcCCcCc
Confidence 467889999999999999765433434
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.96 E-value=0.018 Score=44.22 Aligned_cols=85 Identities=21% Similarity=0.171 Sum_probs=49.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.--. .+++.|+|.-.... ...-.++|........ . .... .....
T Consensus 4 ~P~~l~v~~vt-~~sv~l~W~~p~~~-----------~~~y~i~~~~~~~~~~-------~-~~~~---------~~~~~ 54 (94)
T d1j8ka_ 4 RPKGLAFTDVD-VDSIKIAWESPQGQ-----------VSRYRVTYSSPEDGIH-------E-LFPA---------PDGEE 54 (94)
T ss_dssp CCCCCEEEEEE-TTEEEEECCCCSSC-----------CSCEEEEEEETTTEEE-------E-ECCC---------CCSSC
T ss_pred CCCCCEEEEec-CCEEEEEEeCCCcc-----------ccceEEEEEeecCCCc-------e-EEEe---------cCCCc
Confidence 57888775333 68999999653211 1234567766543111 0 0000 11123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCce--eEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSDV--YYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~~--~~F~T 188 (530)
..+.|+||+|+|.|.++|..-+..+.|.. ..++|
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~p~~~~~~T 90 (94)
T d1j8ka_ 55 DTAELQGLRPGSEYTVSVVALHDDMESQPLIGTQST 90 (94)
T ss_dssp CEEEECSCCCCSEEEEEEEECSSSCCCCCEEEEEEC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCCCcCCEEEEEEE
Confidence 46778999999999999987654455543 34555
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=95.94 E-value=0.0035 Score=56.76 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=27.1
Q ss_pred EEEEEccCCCCCCh-HHHHHHHHh-CCCCEEEEcCcccc
Q 009637 200 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 236 (530)
Q Consensus 200 rf~v~gD~g~~~~~-~~~~~~l~~-~~pDfvl~~GDl~Y 236 (530)
||.++||+|..... .++++.+.. ...|.++++||+++
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vD 52 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVD 52 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSS
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 79999999976433 344555542 45689999999995
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.90 E-value=0.02 Score=46.27 Aligned_cols=39 Identities=15% Similarity=0.252 Sum_probs=29.9
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
-..+.|+||+|+|.|.+||..-+. +.+|+...|+|.+..
T Consensus 69 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~~ 110 (119)
T d1x5ha1 69 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESD 110 (119)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCcCCCCCCCEEEEeCCCC
Confidence 356788999999999999964322 247888999997643
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.026 Score=42.99 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=47.7
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+++.-- .++++.|+|.-... + ....=.|+|....+....... .. ++-.
T Consensus 3 pP~~l~~~~~-~~~sv~l~W~~p~~--~--------~~~~y~v~y~~~~~~~~~~~~----~~-------------~~~~ 54 (91)
T d1fnfa2 3 PPTDLRFTNI-GPDTMRVTWAPPPS--I--------DLTNFLVRYSPVKNEEDVAEL----SI-------------SPSD 54 (91)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCTT--C--------CCSEEEEEEEETTCTTCCEEE----EE-------------CTTC
T ss_pred cCCceEEEEe-CCCEEEEEEEecCC--C--------CcceeEEEEEECCCCccEEEE----Ee-------------CCCc
Confidence 4888877643 37899999975321 0 112346778766543332110 00 1122
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD 182 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~ 182 (530)
..+.|+||+|+|.|.++|..-...+.|+
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~a~~~~g~S~ 82 (91)
T d1fnfa2 55 NAVVLTNLLPGTEYVVSVSSVYEQHEST 82 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEEeceeCCCEEEEEEEEEcCCCCCC
Confidence 4678999999999999997544334443
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.018 Score=44.82 Aligned_cols=71 Identities=17% Similarity=0.351 Sum_probs=47.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|.++.|.-.. .+++.|+|..... + ....-.|+|............ . . .
T Consensus 4 ~~P~nl~v~~~~-~~~v~l~W~~p~~--~--------~~~~y~v~y~~~~~~~~~~~~-~----~--------------~ 53 (95)
T d2b5ic1 4 WAPENLTLHKLS-ESQLELNWNNRFL--N--------HCLEHLVQYRTDWDHSWTEQS-V----D--------------Y 53 (95)
T ss_dssp CCCEEEEEEEEE-TTEEEEEEECSSC--S--------TTCEEEEEEEETTCSSCEEEE-E----C--------------S
T ss_pred cCCCCCEEEEEe-CCEEEEEECCCCC--c--------eeEEEEEEEEcCCCceeeEee-e----c--------------c
Confidence 468999886444 6899999986432 1 123467888877654333221 0 0 1
Q ss_pred EEEEEeCCCCCCCEEEEEEee
Q 009637 154 IHHVRLTGLEPNNKYYYQCGD 174 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~ 174 (530)
...+.|.+|+|+|.|.+||.+
T Consensus 54 ~~~~~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 54 RHKFSLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp SCEEEECSCCTTSCEEEEEEE
T ss_pred cceeEcCCCCCCCEEEEEEEE
Confidence 136778999999999999975
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.88 E-value=0.025 Score=43.50 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=50.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.--. ++++.|+|.-.... ...-.|.|........... +. . +...
T Consensus 6 ~P~~l~v~~v~-~~si~v~W~~p~~~-----------~~~y~i~~~~~~~~~~~~~------~~--~---------~~~~ 56 (93)
T d1tdqa1 6 GPTQILVRDVS-DTVAFVEWTPPRAK-----------VDFILLKYGLVGGEGGKTT------FR--L---------QPPL 56 (93)
T ss_dssp CCEEEEEEEEC-SSCEEEEEECCSSC-----------CSEEEEEEEESSSSCCCEE------EE--E---------CTTC
T ss_pred cCCCCEEEEeC-CCEEEEEEEccccC-----------CCceEEEEEeccCcceeeE------EE--e---------CCCc
Confidence 68888886654 68999999753211 1234677776654322111 00 0 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 188 (530)
..+.|+||+|+|+|.++|..-+..+.|+ ...|+|
T Consensus 57 ~~~~i~~L~p~t~Y~v~V~a~~~~g~s~~~~~~~tT 92 (93)
T d1tdqa1 57 SQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTT 92 (93)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred eEEEEeCcccceEEEEEEEEEeCCCCcCCEEEEEEC
Confidence 3568999999999999997543333332 334554
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.0031 Score=51.52 Aligned_cols=38 Identities=29% Similarity=0.227 Sum_probs=30.3
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
.+++|.+|+|+|.|.+||...+. +.+|+...|+|.+..
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 120 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGS 120 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCCC
Confidence 47889999999999999975432 257888999997643
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.80 E-value=0.041 Score=42.93 Aligned_cols=92 Identities=14% Similarity=0.135 Sum_probs=50.2
Q ss_pred CCCceeEEeec---CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccc
Q 009637 74 FEPEQLSVSLS---FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 74 ~~P~qi~l~~~---~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
..|..+.+.+. ..++++.|+|.......... +--...=.|+|.............
T Consensus 4 ~pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~----~~~~l~Y~v~~~~~~~~~~~~~~~------------------ 61 (103)
T d1f6fb2 4 EPPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKT----GWFTMEYEIRLKPEEAEEWEIHFT------------------ 61 (103)
T ss_dssp CCCEEEEEEEC----CCCCEEEEEECCTTSCTTT----TSSCEEEEEEEEESSCSCCEEEEE------------------
T ss_pred CCCCCCEEEEEecccCCCEEEEEECCCCcccCCC----CcEEEEEEEEEEeCCCcceeeecc------------------
Confidence 45888777543 34678999998753210000 000011245566555443332210
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCCC----CCCCceeEEEc
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPSI----PAMSDVYYFRT 188 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~~----~~~S~~~~F~T 188 (530)
..-..+.|.||+|||.|.+||...+. +.||+.-.++|
T Consensus 62 -~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS~wS~~~~~~~ 102 (103)
T d1f6fb2 62 -GHQTQFKVFDLYPGQKYLVQTRCKPDHGYWSRWSQESSVEM 102 (103)
T ss_dssp -ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEEC
T ss_pred -cceeEEEeCCCCcceEEEEEEEEEeCCCCCCCCcCceeeEC
Confidence 01135788999999999999864332 24666665554
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.70 E-value=0.0085 Score=46.88 Aligned_cols=93 Identities=20% Similarity=0.193 Sum_probs=49.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|++++++--. ++++.|+|.... | + ...-.|+|.................... ..++--
T Consensus 6 ~~~~l~v~~~t-~~sv~v~W~pp~---~-------~-~~~y~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 64 (101)
T d2cuia1 6 RLSQLSVTDVT-TSSLRLNWEAPP---G-------A-FDSFLLRFGVPSPSTLEPHPRPLLQREL---------MVPGTR 64 (101)
T ss_dssp CCCCCEEESCC-SSCEEEECCCCT---T-------S-CSEEEEEEECCCCSSSCCCSSCCCCEEE---------EEETTC
T ss_pred CCCCcEEEEEC-CCEEEEEEEecc---c-------c-ccceEEEEEecCCCceeeccCCcceeEe---------ecccce
Confidence 56777776544 789999995422 1 1 1235677766543221110000000000 001223
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T 188 (530)
....|.||+|+|+|.++|..-+..+.++ .-+++|
T Consensus 65 ~~~~v~~L~p~t~Y~~~V~a~~~~g~g~~~~~~~~T 100 (101)
T d2cuia1 65 HSAVLRDLRSGTLYSLTLYGLRGPHKADSIQGTART 100 (101)
T ss_dssp CEEEECSCCTTCEEEEEEEEECSSSEEEEEEEEEEC
T ss_pred eEEEeCCCCcCCEEEEEEEEEeCCcEeCCeEEEeEE
Confidence 4567899999999999997654333332 344444
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.69 E-value=0.016 Score=45.26 Aligned_cols=76 Identities=14% Similarity=0.189 Sum_probs=44.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+..+ .+++.|+|.-.... |. | ...=.|+|................ . -.
T Consensus 8 ~P~~~~v~~~--~~sv~lsW~pp~~~-~~------~-i~~Y~v~~~~~~~~~~~~~~~~~~--~--------------~~ 61 (100)
T d1cfba1 8 APKLTGITCQ--ADKAEIHWEQQGDN-RS------P-ILHYTIQFNTSFTPASWDAAYEKV--P--------------NT 61 (100)
T ss_dssp CCEEEEEEEC--SSEEEEEEECCCCT-TS------C-CCEEEEEEEESSSTTCCEEEEEEE--E--------------TT
T ss_pred cCcCcEEEEc--CCEEEEEEcCCccc-cc------c-eEEEEEEEecCCCCceeeEEeeec--C--------------Cc
Confidence 6888888754 46899999753321 11 1 123467777655443322211110 0 01
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
....+.+|+|+|.|.+||...+
T Consensus 62 ~~~~~~~L~p~t~Y~frV~A~n 83 (100)
T d1cfba1 62 DSSFVVQMSPWANYTFRVIAFN 83 (100)
T ss_dssp CSEEEEECCSSEEEEEEEEEEE
T ss_pred eEEEEecCCCCCEEEEEEEEEe
Confidence 2345779999999999997654
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.68 E-value=0.043 Score=42.57 Aligned_cols=93 Identities=17% Similarity=0.194 Sum_probs=48.2
Q ss_pred CCCceeEEeecC---CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccc
Q 009637 74 FEPEQLSVSLSF---NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 74 ~~P~qi~l~~~~---~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
..|..+.+.+.. ..+++.|+|.......+. ..--...=.++|....+.......
T Consensus 4 ~pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~----~~~~~~~Y~~~~~~~~~~~~~~~~------------------- 60 (104)
T d3d48r2 4 DPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLK----TGWFTLLYEIRLKPEKAAEWEIHF------------------- 60 (104)
T ss_dssp CCCEEEEEECC------CCEEEEEECCTTCCCT----TSSCCEEEEEEEEETTCSSCEEEE-------------------
T ss_pred cCCCCCEEEEEeccCCCCeEEEEEeCCccccCC----CCcEEEEEeeccccccccceeeec-------------------
Confidence 468888887543 357899999974321000 000000113444444333222110
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCC---C-CCCCceeEEEcC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPS---I-PAMSDVYYFRTL 189 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~---~-~~~S~~~~F~T~ 189 (530)
......+.|.||+|+|.|.+||...+ . +.||+...++|+
T Consensus 61 ~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 61 AGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EETCSEEEECC--CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred cccccEEEECCCCCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 01123577899999999999996422 1 357888888773
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.66 E-value=0.018 Score=43.68 Aligned_cols=71 Identities=23% Similarity=0.234 Sum_probs=45.2
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.++-- +++++.|+|.-.... ...=.|+|........ ... .. + -.
T Consensus 3 ~P~nl~v~~~-~~~s~~l~W~~p~~~-----------~~~Y~v~~~~~~~~~~-~~~-----~~------~-------~~ 51 (86)
T d1tdqa3 3 SPRDLMVTAS-SETSISLIWTKASGP-----------IDHYRITFTPSSGISS-EVT-----VP------R-------DR 51 (86)
T ss_dssp CCEEEEEEEE-CSSCEEEEEECCCSC-----------CSEEEEEEECSSSCCE-EEE-----EE------S-------SC
T ss_pred cCCCCEEEEe-cCCEEEEEEeCCCCC-----------ccceEEEEecccccce-EEE-----eC------C-------Cc
Confidence 4888888754 478999999764321 1234677876543221 110 00 1 12
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
-++.|+||+|||.|.++|..-.
T Consensus 52 ~~~~~~~L~p~t~Y~v~V~a~~ 73 (86)
T d1tdqa3 52 TSYTLTDLEPGAEYIISITAER 73 (86)
T ss_dssp SEEEECCCCTTCCEEEEEEEEE
T ss_pred cEEEECCCccccEEEEEEEEEc
Confidence 3678899999999999997544
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.66 E-value=0.023 Score=44.92 Aligned_cols=84 Identities=13% Similarity=0.064 Sum_probs=46.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.++.+.-. ..+++.|+|.-... -|.. ...-.|+|.................. .....
T Consensus 13 ~P~~~~~~~~-~~~sv~l~W~pp~~-~~~~-------i~~y~v~~~~~~~~~~~~~~~~~~~~------------~~~~~ 71 (111)
T d1wisa1 13 PPTNLGISNI-GPRSVTLQFRPGYD-GKTS-------ISRWLVEAQVGVVGEGEEWLLIHQLS------------NEPDA 71 (111)
T ss_dssp CCEEEEEESC-CSSCEEEEEECCCC-CSSC-------CSEEEEEECBSCCSTTSCCEEEEEEE------------SCTTC
T ss_pred CCCCCEEEEc-CCCEEEEEEeCCCC-CCCc-------eeEEEEeeeecccCCCcceeeeeeee------------cccce
Confidence 6888877643 47899999975321 1111 12345667665433322111000000 01122
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPA 179 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~ 179 (530)
....|.||+|+|.|.+||.+.+..+
T Consensus 72 ~~~~v~~L~p~t~Y~frV~A~N~~G 96 (111)
T d1wisa1 72 RSMEVPDLNPFTCYSFRMRQVNIVG 96 (111)
T ss_dssp SEEEECSCCTTSEECCCCEEECSSC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCc
Confidence 3567899999999999997655333
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.06 Score=42.72 Aligned_cols=98 Identities=18% Similarity=0.218 Sum_probs=54.1
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..++++.+ .+++.|+|.......+... +.-....-.|+|............ ... ...
T Consensus 7 ~pP~nl~v~~~--~~~~~lsW~~P~~~~~~~~--~~~~~~~y~v~~~~~~~~~~~~~~---~~~-------------~~~ 66 (114)
T d2gysa2 7 PEPRDLQISTD--QDHFLLTWSVALGSPQSHW--LSPGDLEFEVVYKRLQDSWEDAAI---LLS-------------NTS 66 (114)
T ss_dssp CCCEEEEEEEE--TTEEEEEEECCC-----CC--SCGGGEEEEEEEEETTSCSTTCEE---EEE-------------SSS
T ss_pred CcCCCeEEEEe--CCEEEEECCCCcccccccc--eeeeEEEEEEEEeccCCceEEEEE---eec-------------cCc
Confidence 47999998765 4689999987532111000 000000123555555433221111 000 112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---------CCCCceeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---------PAMSDVYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---------~~~S~~~~F~T~p~ 191 (530)
--.+.+.+|.|+|.|..||..... ..||+...|+|.|.
T Consensus 67 ~~~~~~~~L~p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 67 QATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp EEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred eEEEEeCCCCCCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 346788999999999999965211 25778899999763
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.55 E-value=0.03 Score=44.98 Aligned_cols=89 Identities=16% Similarity=0.193 Sum_probs=48.3
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.-.. ++++.|+|.-....-| + ...=.|+|............ ... ..-.
T Consensus 23 ~P~~~~~~~~~-~~sv~v~W~~P~~~~g-------~-i~~Y~i~y~~~~~~~~~~~~---~~~-------------~~~~ 77 (117)
T d1wfoa1 23 PPMGILFPEVR-TTSVRLIWQPPAAPNG-------I-ILAYQITHRLNTTTANTATV---EVL-------------APSA 77 (117)
T ss_dssp CCCCCEEEEEC-SSEEEEECCCCSCCCS-------C-CCEEEEEEEESSCCCSCCCE---EEE-------------CTTC
T ss_pred CCCCcEEEEec-CCEEEEEEECCCCCCC-------c-eEEEeeeeeeccCCCceEeE---Eec-------------CCce
Confidence 57777665433 7899999975332111 0 11234666554432221110 000 0112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T 188 (530)
....|++|+|+|.|.+||..-+.. .+|+...++|
T Consensus 78 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~tT 114 (117)
T d1wfoa1 78 RQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTT 114 (117)
T ss_dssp CEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECC
T ss_pred EEEEECCCCCCCEEEEEEEEECCCcCCCCcCCEEEEC
Confidence 356689999999999999765432 2444555554
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.038 Score=42.11 Aligned_cols=77 Identities=18% Similarity=0.151 Sum_probs=46.1
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.+++++-- +.++|.|+|.-.... ...=.|+|....+...... .. ..-.
T Consensus 4 pP~~l~v~~~-~~~si~v~W~~p~~~-----------~~~Y~i~~~~~~~~~~~~~-----~~-------------~~~~ 53 (90)
T d1fnha2 4 PPRRARVTDA-TETTITISWRTKTET-----------ITGFQVDAVPANGQTPIQR-----TI-------------KPDV 53 (90)
T ss_dssp CCEEEEEEEE-CSSEEEEEEECCSSC-----------CCCEEEEEEESSSSCCEEE-----EC-------------CTTC
T ss_pred cCCCCEEEEe-cCCEEEEEEECCCCC-----------CceeEEEEEEccCCceEEE-----ec-------------CCCc
Confidence 4888887643 478999999743211 1234566766543222211 00 1112
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
....|+||+|||.|.++|..-+..+.|
T Consensus 54 ~~~~i~~L~p~t~Y~~~V~a~~~~g~s 80 (90)
T d1fnha2 54 RSYTITGLQPGTDYKIYLYTLNDNARS 80 (90)
T ss_dssp SEEEEESCCTTCEEEEEEEEEETTEEC
T ss_pred cEEEeCCCCCCcEEEEEEEEEeCCCCc
Confidence 456789999999999999764433444
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.51 E-value=0.017 Score=45.28 Aligned_cols=83 Identities=12% Similarity=0.092 Sum_probs=46.2
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-. +.+++.|+|.-....-|.. ...=.|+|...++..+..+. . ....
T Consensus 3 ~~P~~~~v~~~-~~~sv~l~W~pP~~~~~~~-------i~~Y~V~~~~~~~~~~~~~~----------~-------~~~~ 57 (98)
T d1x5ya1 3 SAPQHLTVEDV-TDTTTTLKWRPPDRIGAGG-------IDGYLVEYCLEGSEEWVPAN----------K-------EPVE 57 (98)
T ss_dssp CCCEEEEEEEE-CSSEEEEEEECCSCCCSSC-------CCEEEEEEEETTCCCCEESS----------S-------SCBS
T ss_pred CCCcCcEEEEc-cCCEEEEEEECCCcCCCCC-------ceEEEEEEEecCcceeEEee----------e-------ecCc
Confidence 35788877643 3689999998532211110 11234666665543322110 0 0011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
...+.|+||+|++.|.|||..-+..+.|
T Consensus 58 ~~~~~v~~L~~~~~Y~frV~A~n~~G~s 85 (98)
T d1x5ya1 58 RCGFTVKDLPTGARILFRVVGVNIAGRS 85 (98)
T ss_dssp SSEEEEECCCTTCCEEEEEEEEETTEEC
T ss_pred eeEEEECCCcCCeEEEEEEEEECCCcCC
Confidence 1356789999999999999865433333
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.51 E-value=0.026 Score=44.70 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=45.4
Q ss_pred CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCC-CcceEEEEEEEEeeeccccCCccccccCeEEEEEeCCCCC
Q 009637 86 NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRT-NLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHVRLTGLEP 164 (530)
Q Consensus 86 ~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~-~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~P 164 (530)
.++++.|+|......-+ ....-.|+|....+ ..+..+. .. ..-.+..+|++|.|
T Consensus 20 ~~~~i~v~W~pp~~~~~--------~~~~Y~i~y~~~~~~~~w~~v~-~~----------------~~~~~~~~l~~L~p 74 (106)
T d1cd9b2 20 QPGCLWLSWKPWKPSEY--------MEQECELRYQPQLKGANWTLVF-HL----------------PSSKDQFELCGLHQ 74 (106)
T ss_dssp CCSCEEEEEECCGGGTT--------SCEEEEEEEEESSTTCCCEEEE-EE----------------ESCEEEEEECCCCS
T ss_pred CCCEEEEEEcCcccCCc--------cceEEEEEEeeccccccceeee-cc----------------cCCceEEEEeccCC
Confidence 47889999986433211 01234688876433 3333321 00 11245677899999
Q ss_pred CCEEEEEEeeC---CCC---CCCceeEEEc
Q 009637 165 NNKYYYQCGDP---SIP---AMSDVYYFRT 188 (530)
Q Consensus 165 ~T~Y~Yrvg~~---~~~---~~S~~~~F~T 188 (530)
+|.|.+||... +.+ .||...+|+|
T Consensus 75 ~t~Y~frVra~~~~g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 75 APVYTLQMRCIRSSLPGFWSPWSPGLQLRP 104 (106)
T ss_dssp CSCEEEEEEEEESSSCCCCCCCCCCEEECC
T ss_pred CeEEEEEEEEEeCCCCCCCcCCCCCeEecC
Confidence 99999998532 112 4556666665
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.50 E-value=0.019 Score=45.07 Aligned_cols=22 Identities=14% Similarity=0.357 Sum_probs=18.7
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
....++||+|+|+|.|||..-+
T Consensus 60 ~~~~i~~L~p~t~Y~frV~A~n 81 (104)
T d1bpva_ 60 NEFTVSGLTEDAAYEFRVIAKN 81 (104)
T ss_dssp SEEEECSCCSSCCEEEEEEEEC
T ss_pred eEEEEcCCCCCCEEEEEEEEEE
Confidence 4567899999999999998754
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.40 E-value=0.039 Score=42.77 Aligned_cols=81 Identities=11% Similarity=0.054 Sum_probs=40.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..|.+.... .+++.|+|......-+... ....=.|+|....+....... .. . ..+.
T Consensus 3 ~~P~~l~v~~~~-~~s~~v~W~~P~~~~~~~~-----~~~~y~v~y~~~~~~~~~~~~------~~--~-------~~~~ 61 (101)
T d1iarb2 3 RAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLY-----NHLTYAVNIWSENDPADFRIY------NV--T-------YLEP 61 (101)
T ss_dssp CCCEEEEEC-----CCEEEEEECSSCTTSTTG-----GGCEEEEEEEESSSCSCEEEE------EE--C-------SSCC
T ss_pred ccCCcCEEEEEe-CCeEEEEEccccCCCCccc-----eeeEEEEeeecccceeeeeee------ee--c-------cCcc
Confidence 368888876554 6799999987532111000 001135677666544332221 00 0 1123
Q ss_pred EEEEEeCCCCCCCEEEEEEeeC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
...+.|.+|+|+|.|.+||...
T Consensus 62 ~~~~~i~~L~p~t~Y~~rVrA~ 83 (101)
T d1iarb2 62 SLRIAASTLKSGISYRARVRAW 83 (101)
T ss_dssp EEEECC-----CCCEEEEEEEE
T ss_pred ceEEEECCCCCCCEEEEEEEEE
Confidence 4567899999999999999743
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.28 E-value=0.043 Score=43.78 Aligned_cols=89 Identities=17% Similarity=0.084 Sum_probs=51.8
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+++..+ .+++.|+|.-....-| + ...=.|+|+....... .. .. .+.
T Consensus 22 ~~P~~~~~~~~--~~si~v~W~~p~~~~g-------~-i~~Y~i~~~~~~~~~~-~~-----~~-------------~~~ 72 (113)
T d1x5ia1 22 EVPSSLHVRPL--VTSIVVSWTPPENQNI-------V-VRGYAIGYGIGSPHAQ-TI-----KV-------------DYK 72 (113)
T ss_dssp CSCSEEEEEEE--TTEEEEEEECCSCTTB-------C-CCEEEEEECSSCGGGE-EE-----EC-------------CTT
T ss_pred CCCEeeeeeeC--CCEEEEEEEccccCCc-------c-EEEEEEEeeeccccce-ee-----ee-------------eCC
Confidence 36888887654 4789999985332111 0 1123566665543211 11 11 112
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCCc--eeEEEcCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMSD--VYYFRTLPA 191 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S~--~~~F~T~p~ 191 (530)
.....|.+|+|+|.|.+||..-+..+.|+ .-.++|.|.
T Consensus 73 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~~~~~~~T~P~ 112 (113)
T d1x5ia1 73 QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYESAVTRPH 112 (113)
T ss_dssp CCEEEECSCCSSCEECCEEEEECSSCBCCCCCCCEECCCC
T ss_pred ccEEEEeccccCcEEEEEEEEECCCcCCCCeeeEEEeCCC
Confidence 24667999999999999997655444543 355777663
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.25 E-value=0.14 Score=47.61 Aligned_cols=189 Identities=15% Similarity=0.172 Sum_probs=101.6
Q ss_pred CeEEEEEccCCCCCChH---HHHHHHH-hCCCCEEEEcCccccccccccCCCCCcccccCCCCCCccccchHHHHHHHHH
Q 009637 198 PKRIAIVGDLGLTYNTT---CTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 273 (530)
Q Consensus 198 ~~rf~v~gD~g~~~~~~---~~~~~l~-~~~pDfvl~~GDl~Yad~~~~~G~~~~cy~~~~~~~~~~~~y~~~wd~~~~~ 273 (530)
.+||+++||.=...... ..+..+. +.++|||+..|-.+- .|.... + ..+.++
T Consensus 4 ~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa------~G~Git---------------~---k~~~eL 59 (281)
T d1t71a_ 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTT------HGKGLS---------------L---KHYEFL 59 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTT------TTSSCC---------------H---HHHHHH
T ss_pred cceEEEEEccCCHHHHHHHHHHhHHHHHHhCCCEEEECCccCC------CCcCCC---------------H---HHHHHH
Confidence 58999999974321111 2233444 358999999999983 333210 1 112222
Q ss_pred HHHhhhcCCeEEccCCccccccccccchHHHhhh---c----CCCCCCC-CCCCcceEEEEcCcEEEEEEcc--cccCC-
Q 009637 274 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR---F----AFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYD- 342 (530)
Q Consensus 274 l~~l~~~vP~~~v~GNHD~~~~~~~~~f~~y~~~---f----~~P~~~~-~~~~~~yYsf~~G~v~fI~Ldt--~~~~~- 342 (530)
+ ...+- ..+.|||=+.. +....|... . ++|...+ +..+..|..++.++.++.+++- .....
T Consensus 60 ~---~~GvD-vIT~GNH~wd~----kei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~ 131 (281)
T d1t71a_ 60 K---EAGVN-YITMGNHTWFQ----KLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLP 131 (281)
T ss_dssp H---HHTCC-EEECCTTTTCC----GGGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCS
T ss_pred H---HhCCc-EEEcCchhhhc----hhhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeecccccccc
Confidence 2 23444 46789997742 223333322 2 2332211 2345668888877656655553 21111
Q ss_pred -CCHHHHHHHHHHHhcccCCCCCEEEEEeCCCCccCCCCCCchhHHHHHHHHHHHHHcCCcEEEEccccCceeeeecccC
Q 009637 343 -KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNY 421 (530)
Q Consensus 343 -~~~~Q~~WL~~~L~~~~r~~~pwvIv~~H~P~y~s~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~yeR~~pv~~~ 421 (530)
.......-+++.+.+ ..++.+||=+|.=.- ....+| -.+.+-+|.+|+.=|+|.-. .+-
T Consensus 132 ~~~~~pf~~~~~~~~~---~~~d~i~VDfHaEAT-----------SEK~A~-g~~lDGrvsaVvGTHTHV~T-----aD~ 191 (281)
T d1t71a_ 132 FKTTNPFKVLKELILK---RDCDLHIVDFHAETT-----------SEKNAF-CMAFDGYVTTIFGTHTHVPS-----ADL 191 (281)
T ss_dssp SCBCCHHHHHHHHHTT---CCCSEEEEEEECSCH-----------HHHHHH-HHHHTTTSSEEEEESSSSCC-----TTC
T ss_pred ccccHHHHHHHHhhcc---cCCCeEEEEeccchh-----------hhhhhh-eeeeCCcEEEEEecCccccc-----Ccc
Confidence 122233334444443 456678888885321 112222 34456689999999999632 222
Q ss_pred ccCCCCcEEEEe-CCCcc
Q 009637 422 TLDPCGPVHITI-GDGGN 438 (530)
Q Consensus 422 ~~~~~G~vyIv~-G~gG~ 438 (530)
++=|+|+.|++- |.-|.
T Consensus 192 rILp~GTAyiTDvGMtG~ 209 (281)
T d1t71a_ 192 RITPKGSAYITDVGMCGP 209 (281)
T ss_dssp EECTTSCEEESCCCEEBC
T ss_pred ccccCCeEEEecCccccC
Confidence 234689999964 55554
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.16 E-value=0.048 Score=43.33 Aligned_cols=94 Identities=16% Similarity=0.105 Sum_probs=53.4
Q ss_pred CCCceeEEeecC-CCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSF-NHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~-~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|.++.+.... .+++|.|+|.-....-| + ...=.|+|....+...... .. ....+
T Consensus 6 ~pP~~~~v~~~~~~~~si~v~W~~p~~~~~-------~-~~~Y~v~y~~~~~~~~~~~-------~~--------~~~~~ 62 (115)
T d1bqua2 6 NPPHNLSVINSEELSSILKLTWTNPSIKSV-------I-ILKYNIQYRTKDASTWSQI-------PP--------EDTAS 62 (115)
T ss_dssp CCCEEEEEECC--CCSCEEEEEECCGGGGT-------S-CEEEEEEEEETTCSSCEEC-------CG--------GGGCS
T ss_pred CCCCCCEEEEeccCCCEEEEEEeecccccc-------c-eeeeeeeeeeeeeeeeecc-------cc--------ccccc
Confidence 358888877543 46889999975332111 0 0123455665443322111 00 01122
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCC------CCCCceeEEEcCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSI------PAMSDVYYFRTLP 190 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~------~~~S~~~~F~T~p 190 (530)
...++.|++|+|++.|.+||...+. ..||....++|..
T Consensus 63 ~~~~~~i~~L~~~t~Y~~~V~a~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 63 TRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred cccEEeeCCCccCcEEEEEEEEEeCCCccCCcCCcCCEEEECCC
Confidence 3357889999999999999953221 1356778888854
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.01 E-value=0.082 Score=41.47 Aligned_cols=90 Identities=16% Similarity=0.077 Sum_probs=49.7
Q ss_pred CCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 75 EPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 75 ~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.|..+.+... ..++++.|+|........ +.. ....=.++|....+.....+. ..-
T Consensus 10 PP~~l~v~~~~~~~~~l~l~W~~P~~~~~----~~~-~~~~y~~~~~~~~~~~~~~~~-------------------~~~ 65 (109)
T d1uc6a_ 10 PPENVVARPVPSNPRRLEVTWQTPSTWPD----PES-FPLKFFLRYRPLILDQWQHVE-------------------LSN 65 (109)
T ss_dssp CCEEEEEEECTTCTTCEEEEEECCTTCCC----TTT-TTBCEEEEEEESSSCCCCCEE-------------------ESS
T ss_pred CCCCCEEEEEecCCCEEEEEEeCCcccCC----CCe-eEEEEEEEEeecCCCceEEec-------------------cCC
Confidence 5889988754 457899999987532100 000 011233555554433322211 011
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC--C---CCCceeEEEc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI--P---AMSDVYYFRT 188 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~--~---~~S~~~~F~T 188 (530)
...+.|.+|+|+|.|.+||...+. + .||+....+|
T Consensus 66 ~~~~~i~~L~~~t~Y~~rVrA~~~~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 66 GTAHTITDAYAGKEYIIQVAAKDNEIGTWSDWSVAAHATP 105 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCBSSSCCCCCCCEEEEECC
T ss_pred ceeEEeCCCCCCCEEEEEEEEEECCCCCcCCCCCCEEeEC
Confidence 235678999999999999975321 2 3455555544
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.99 E-value=0.015 Score=45.57 Aligned_cols=27 Identities=11% Similarity=0.187 Sum_probs=20.7
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|.||+|++.|.+||..-+..+++
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g 90 (103)
T d1qg3a2 64 RMLLIENLRESQPYRYTVKARNGAGWG 90 (103)
T ss_dssp CEEEECCCCTTCCEEEEEEEEETTEEC
T ss_pred eEEEEeecCCCCEEEEEEEEEcCCccC
Confidence 367899999999999999765433443
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.039 Score=43.66 Aligned_cols=91 Identities=12% Similarity=0.044 Sum_probs=52.8
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.++. .++++.|+|.-....-| + ...=.|+|...... +..... .. +...
T Consensus 10 PP~~~~~~~--t~~si~l~W~pp~~~~~-------~-i~~Y~v~~~~~~~~-~~~~~~---~~-------------~~~~ 62 (108)
T d1v5ja_ 10 PPRGLVAVR--TPRGVLLHWDPPELVPK-------R-LDGYVLEGRQGSQG-WEVLDP---AV-------------AGTE 62 (108)
T ss_dssp CCEEEEEEE--CSSSEEEEEECCSCCSS-------C-CCBEEEEEEETTCC-CEEEEE---EE-------------CSSC
T ss_pred cCCCeEEEE--cCCEEEEEEEecccCCC-------c-eeEEEEEeeeeeee-eeeccc---cc-------------ccee
Confidence 578887654 46789999985332111 0 12235677665432 211110 00 1123
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
+.+.|++|+|+|.|.|||..-+.. .+|+...++|....
T Consensus 63 ~~~~i~~L~p~t~Y~~rV~A~n~~g~s~~S~~~~~~T~~~~ 103 (108)
T d1v5ja_ 63 TELLVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGLS 103 (108)
T ss_dssp CEEECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSCS
T ss_pred eeEEEEeccCCcEEEEEEEEEeCCCEeCCcCceEEECCCCC
Confidence 577899999999999999754322 45666667775443
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.035 Score=42.64 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=44.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|..+.+.--. .+++.|+|..... +....=.|+|........... .. . +.-.
T Consensus 8 ~P~~l~v~~~t-~~si~l~W~~p~~----------~~i~~Y~v~~~~~~~~~~~~~----~~----~---------~~~~ 59 (95)
T d2fnba_ 8 QLTDLSFVDIT-DSSIGLRWTPLNS----------STIIGYRITVVAAGEGIPIFE----DF----V---------DSSV 59 (95)
T ss_dssp CCTTCEEECCC-SSCEEEECCCCCC----------SSCCEEEEEEEEETSCCEEEE----EE----C---------CSSC
T ss_pred cCCCeEEEEEc-CCEEEEEEEecCC----------ceEEeEEEEEEEeeccceEEE----EE----e---------CCCC
Confidence 37777765433 6899999965321 111223466655433221111 00 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
..+.|+||+|||.|.++|..-+..+.|
T Consensus 60 t~~~i~~L~p~t~Y~~~V~a~~~~g~s 86 (95)
T d2fnba_ 60 GYYTVTGLEPGIDYDISVITLINGGES 86 (95)
T ss_dssp SEEEECCCCTTSEEEEEEEEEETTEEC
T ss_pred eEEEEecccCCEEEEEEEEEEeCCcEe
Confidence 467889999999999999754433444
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.88 E-value=0.042 Score=43.11 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=26.0
Q ss_pred EEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTL 189 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~ 189 (530)
...|.+|+|+|+|.+||..-+ .+.+|+...|+|.
T Consensus 67 ~~~~~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 67 QFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECS
T ss_pred EEEecCCcCCcEEEEEEEEECCCeEcCCCCcEEEECC
Confidence 456789999999999996432 2357888888874
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.86 E-value=0.08 Score=41.59 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=23.1
Q ss_pred CeEEEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 152 GIIHHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 152 ~~~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
+.-...+|+||+|+|+|.+||.+.+..+.|
T Consensus 65 ~~~~~~~i~~L~p~t~Y~frV~A~N~~G~s 94 (107)
T d2ic2a1 65 GKSFTASVTDLKPQHTYRFRILAVYSNNDN 94 (107)
T ss_dssp EEEEEEEECSCCSSEEEEEEEEEEETTSCE
T ss_pred cceeEEEECCCcCCcEEEEEEEEEcCCCCC
Confidence 345678899999999999999865543444
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.73 E-value=0.075 Score=42.67 Aligned_cols=37 Identities=27% Similarity=0.266 Sum_probs=28.5
Q ss_pred EEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPAS 192 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~ 192 (530)
..+|++|+|+|.|.+||...+.. .+|+...++|.+..
T Consensus 76 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEeCCCCCCCcEeeEEEEEEeCCcEeCCCCCEEEEeCCCC
Confidence 45789999999999999764422 56788899987544
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.67 E-value=0.022 Score=44.98 Aligned_cols=33 Identities=21% Similarity=0.103 Sum_probs=24.4
Q ss_pred EEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEc
Q 009637 156 HVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRT 188 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T 188 (530)
...|+||+|+|+|.+||...+. +.+|+...++|
T Consensus 69 ~~~i~~L~p~t~Y~~rV~A~n~~G~s~~S~~v~v~T 104 (107)
T d2crma1 69 EHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQT 104 (107)
T ss_dssp EEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCC
T ss_pred EEEEeccCCCCEEEEEEEEECCCcCcCCCCcEEEEC
Confidence 4578999999999999975432 24666666666
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=94.63 E-value=0.055 Score=42.44 Aligned_cols=83 Identities=11% Similarity=0.061 Sum_probs=46.4
Q ss_pred CCCCCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccc
Q 009637 71 VTGFEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYT 150 (530)
Q Consensus 71 ~~~~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~ 150 (530)
++...|..|.+.-.. .++|.|+|.-...... -++ ...=.|+|........... ... .
T Consensus 3 ~P~~~P~~v~~~~~~-~~si~v~W~p~~~~~~-----ng~-i~~Y~I~y~~~~~~~~~~~---~~~-------------~ 59 (105)
T d1cfba2 3 VPFKNPDNVVGQGTE-PNNLVISWTPMPEIEH-----NAP-NFHYYVSWKRDIPAAAWEN---NNI-------------F 59 (105)
T ss_dssp CCSCCCSCCEEECSS-TTCEEEECCCCCGGGT-----CSS-SCEEEEEEEESSTTCCCEE---EEE-------------C
T ss_pred CCCCCCcCeEEEEcc-CCeEEEEEeCCChhhc-----Cce-EEEEEEEeeeeccccceeE---EEe-------------c
Confidence 334568888876544 7899999964221100 001 1123466665543322111 000 0
Q ss_pred cCeEEEEEeCCCCCCCEEEEEEeeCC
Q 009637 151 SGIIHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 151 ~~~~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
......+.|.+|+|+|.|.+||..-+
T Consensus 60 ~~~~~~~~i~~L~p~t~Y~~~V~A~N 85 (105)
T d1cfba2 60 DWRQNNIVIADQPTFVKYLIKVVAIN 85 (105)
T ss_dssp CTTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred CCCccEEEECCCCCCCEEEEEEEEEe
Confidence 11234678899999999999997654
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.42 E-value=0.093 Score=40.87 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=46.3
Q ss_pred CCCceeEEeec-CCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLS-FNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~-~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|..+.++.. ..++++.|+|.......+ ......-.|+|............ . .+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~------~~~~~~y~v~~~~~~~~~~~~~~-----~-------------~~ 58 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNS------SFYRLRFELRYRAERSKTFTTWM-----V-------------KD 58 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCC------SSSCEEEEEEEEETTCSCCEEEE-----C-------------GG
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCC------CceeEEEEEEEeeCCCCceeeec-----c-------------cc
Confidence 46888888764 457899999986431100 00112345667766544332221 0 01
Q ss_pred eEEEEEeCCCCCCCEEEEEEee
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGD 174 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~ 174 (530)
......|.+|+|+|.|.+||..
T Consensus 59 ~~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 59 LQHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp GCSEEEESSCCTTCCEEEEEEE
T ss_pred ceEEEEECCCCCCCEEEEEEEE
Confidence 1235678999999999999964
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.26 E-value=0.074 Score=43.04 Aligned_cols=92 Identities=12% Similarity=0.158 Sum_probs=49.9
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|.+|.+.-.. .+++.|+|.-.... +.. ...-.++|............-... ...
T Consensus 19 ~P~~~~v~~~~-~~sv~l~W~~p~~~-~~~-------i~~~~~~~~~~~~~~~~~~~~~~~----------------~~~ 73 (127)
T d1ueya_ 19 PPFDLELTDQL-DKSVQLSWTPGDDN-NSP-------ITKFIIEYEDAMHKPGLWHHQTEV----------------SGT 73 (127)
T ss_dssp CCEEEEEECCS-SSCEEEEEECCCCC-SSC-------EEEEEEEEEBTTTCTTCEEEEEEE----------------ESS
T ss_pred CCCCcEEEEec-CCeEEEEEeCCccc-ccc-------eEeeeeeeccccccceeEEEEeec----------------CCc
Confidence 58888776443 68899999754321 110 122345555443332222111100 012
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC---CCCce-eEEEcCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP---AMSDV-YYFRTLPA 191 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~-~~F~T~p~ 191 (530)
+...|.+|+|++.|.+||..-+.. .+|+. ..++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~s~~~~t~~~ 114 (127)
T d1ueya_ 74 QTTAQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp CCEEEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred eEEEECCCccCCEEEEEEEEEcCCcCcCCcCCcccEEcCCC
Confidence 345678999999999999654322 34433 45677654
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.18 E-value=0.052 Score=42.94 Aligned_cols=22 Identities=23% Similarity=0.440 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+.|+||+|+|+|.|||..-+
T Consensus 69 ~~~~i~~L~p~t~Y~frV~A~N 90 (108)
T d1wf5a1 69 TSVTVKGLVPARSYQFRLCAVN 90 (108)
T ss_dssp CEEEEESCCTTCEEEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEEEc
Confidence 3567899999999999997644
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.073 Score=43.81 Aligned_cols=38 Identities=21% Similarity=0.266 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPAS 192 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~ 192 (530)
..++|+||+|+|.|.+||..-+. +.+|+...|+|.+.+
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~~ 122 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCE 122 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCSS
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCCC
Confidence 35789999999999999965332 357888899997643
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.15 E-value=0.073 Score=43.13 Aligned_cols=40 Identities=20% Similarity=0.065 Sum_probs=30.6
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEcCCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRTLPASG 193 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T~p~~~ 193 (530)
..+.+|+||+|+|.|.+||..-+. +..|+...++|++..+
T Consensus 74 ~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~~~~~~T~e~~~ 116 (120)
T d1ujta_ 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESG 116 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCC
T ss_pred eeEEEECCCCCCCEEEEEEEEEeCCcCcCCCCCEEEEeCCCCc
Confidence 346778999999999999864332 2567888999988644
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.84 E-value=0.15 Score=39.72 Aligned_cols=84 Identities=12% Similarity=0.046 Sum_probs=45.9
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
.+|..|..-.....++|+++|.-+.. -|. | ..-.+.|............-...... .....
T Consensus 6 ~~P~~v~~i~~~~~~sv~~sW~p~~d-~~~------~--~~y~~~y~~~~~~~~~~~~~~~~~~~----------~~~~~ 66 (107)
T d1cd9b1 6 ASPSNLSCLMHLTTNSLVCQWEPGPE-THL------P--TSFILKSFRSRADCQYQGDTIPDCVA----------KKRQN 66 (107)
T ss_dssp CCCEEEEEEEETTTTEEEEEEECCSC-CSS------C--CEEEEEEEECCGGGCSCCCEEEEEEC----------CTTCC
T ss_pred CCCcCCEEEEecCCCEEEEEEcCCCC-CCC------C--cceeEEEEEeecccceeeeeeeeecc----------ccCcc
Confidence 46788763223347899999976432 111 1 22345565544322211100000000 01123
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
.-.+.+++|+|++.|++||.+.+
T Consensus 67 ~~~~~~~~L~~~t~Y~frV~A~N 89 (107)
T d1cd9b1 67 NCSIPRKNLLLYQYMAIWVQAEN 89 (107)
T ss_dssp EEEEEGGGCCTTSCEEEEEEEEE
T ss_pred ccEEEcCCCCcCceEEEEEEEEe
Confidence 56788999999999999998665
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.64 E-value=0.067 Score=42.87 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=17.7
Q ss_pred EEEeCCCCCCCEEEEEEeeCC
Q 009637 156 HVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 156 ~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
..+|+||+|+|.|.+||...+
T Consensus 73 ~~~v~~L~p~t~Y~frV~A~N 93 (117)
T d1uema_ 73 LYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEE
T ss_pred cceECCCCCCCEEEEEEEEEe
Confidence 456899999999999997644
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.58 E-value=0.071 Score=41.75 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=18.6
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
....|+||+|+|.|.+||..-+
T Consensus 67 ~~~~i~~L~p~t~Y~~~V~A~n 88 (106)
T d1wfna1 67 LEYRVTGLTALTTYTIEVAAMT 88 (106)
T ss_dssp CEEEEESCCTTCEEEEEEEEEC
T ss_pred eEEEEccCCCCCEEEEEEEEEC
Confidence 4677899999999999997644
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.40 E-value=0.16 Score=38.55 Aligned_cols=74 Identities=14% Similarity=0.272 Sum_probs=42.0
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeE
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGII 154 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~ 154 (530)
.|. +.++- ...+++.|+|.-....-| . ...=.|+|............ +. ...
T Consensus 3 ~P~-~~~~~-~~~~sv~l~W~pP~~~~g-~-------i~~Y~i~~~~~~~~~~~~~~-----~~-------------~~~ 54 (94)
T d2dn7a1 3 RPT-MMIST-TAMNTALLQWHPPKELPG-E-------LLGYRLQYCRADEARPNTID-----FG-------------KDD 54 (94)
T ss_dssp CCE-EEEEE-CSTTEEEEEEECCSSCSS-C-------CCEEEEEEEETTCSSCEEEE-----EE-------------TTC
T ss_pred CCc-EeEEE-EeCCEEEEEEeCCCCCCC-c-------eEEEEEEEEEcCCCCcEEEE-----cC-------------CCc
Confidence 464 33333 336899999986432111 0 12345677665544332221 11 012
Q ss_pred EEEEeCCCCCCCEEEEEEeeCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
....|++|+|+|.|.+||..-+
T Consensus 55 ~~~~i~~L~p~t~Y~~~V~A~n 76 (94)
T d2dn7a1 55 QHFTVTGLHKGTTYIFRLAAKN 76 (94)
T ss_dssp CEEEEECCCTTCEEEEEEEEEE
T ss_pred cEEEEEccCCeeEEEEEEEEEc
Confidence 3457899999999999997544
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.34 E-value=0.061 Score=43.52 Aligned_cols=105 Identities=10% Similarity=0.124 Sum_probs=55.5
Q ss_pred CCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEE--EEEEEEeeeccccCCccccccC
Q 009637 75 EPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEA--TGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 75 ~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a--~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
.|..|.++. ..+++.|+|.-....-| + ...=.|+|........... ......+... .......+
T Consensus 10 aP~~v~v~~--~~~si~l~W~~P~~~~g-------~-i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 75 (123)
T d1wfta_ 10 APSTVRISK--NVDGIHLSWEPPTSPSG-------N-ILEYSAYLAIRTAQMQDNPSQLVFMRIYCGL----KTSCTVTA 75 (123)
T ss_dssp CCEEEEEEE--CSSEEEEEEECCSSCCS-------S-CCCEEEEEEECSSCCCSCSCCCEEEEEEEES----CSEEEEEH
T ss_pred CCcccEEEe--CCCEEEEEecCchhcCC-------c-eEEEEEEEEECCCCCccccceeeeEEEecCC----ceeEeecC
Confidence 688888765 46889999985432211 1 1234577766544322110 0001111100 00000000
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCCCC---CCCceeEEEcCCCCC
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPSIP---AMSDVYYFRTLPASG 193 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~~~---~~S~~~~F~T~p~~~ 193 (530)
-.-...|.+|+|+|.|.+||...+.. .+|++..|+|....+
T Consensus 76 ~~~~~~i~~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~~~ 119 (123)
T d1wfta_ 76 GQLANAHIDYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSKSG 119 (123)
T ss_dssp HHHTTCCCBCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCCSS
T ss_pred CccEEEEcCCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCCCC
Confidence 01123568999999999999865543 456778888866543
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.29 E-value=0.098 Score=41.15 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=24.4
Q ss_pred EEEEeCCCCCCCEEEEEEeeC--CC---CCCCceeEEEc
Q 009637 155 HHVRLTGLEPNNKYYYQCGDP--SI---PAMSDVYYFRT 188 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~--~~---~~~S~~~~F~T 188 (530)
..+.|++|+|+|.|.+||... .. +.||+....+|
T Consensus 65 ~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~wS~~v~v~~ 103 (106)
T d1axib2 65 TSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTL 103 (106)
T ss_dssp SEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECC
T ss_pred ceEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEC
Confidence 367889999999999999642 22 25666666655
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.25 E-value=0.19 Score=37.91 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=18.1
Q ss_pred EEEEeCCCCCCCEEEEEEeeC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDP 175 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~ 175 (530)
..+.|+||+|+|.|.++|..-
T Consensus 50 t~~~l~~L~p~t~Y~~~V~a~ 70 (91)
T d1fnaa_ 50 STATISGLKPGVDYTITVYAV 70 (91)
T ss_dssp CEEEECSCCTTCEEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEEE
Confidence 367899999999999999753
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.36 E-value=0.068 Score=42.97 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=53.0
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..|.+.....+++|.|+|.-.... +. +......++.|....+..... . . .. ...-
T Consensus 12 ~pP~~v~v~~~~s~~si~vsW~PP~~~-~~-----~~~~~~~i~~Y~v~~~~~~~~---~--~-~~----------~~~~ 69 (117)
T d2cspa1 12 APPQDVTVQAGVTPATIRVSWRPPVLT-PT-----GLSNGANVTGYGVYAKGQRVA---E--V-IF----------PTAD 69 (117)
T ss_dssp CCCEEEEECCCSSTTEEEEEEECCCCC-TT-----SCSSSSCEEEEEEESSSSEEE---E--E-CC----------TTCS
T ss_pred CCCCccEEEEecCCCEEEEEEcCCCcc-cc-----CcccccceEEEEEEeecccce---e--e-ee----------eccc
Confidence 468888886655678999999753211 00 011123567786543221110 0 0 00 1123
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCC---CCCCceeEEEc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSI---PAMSDVYYFRT 188 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~---~~~S~~~~F~T 188 (530)
...+.|+||+|+|.|.+||...+. +.+|+.-.++|
T Consensus 70 ~~~~~i~~L~~~t~Y~v~V~A~n~~G~s~~S~~v~i~t 107 (117)
T d2cspa1 70 STAVELVRLRSLEAKGVTVRTLSAQGESVDSAVAAVPP 107 (117)
T ss_dssp EEEEESHHHHHHTCSCBEEEEEESSCCCCCCSCBCCCH
T ss_pred eeeeeccCCCCCcEEEEEEEEEcCCCcCCCCCCEEeeC
Confidence 456789999999999999864332 23565555555
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.65 E-value=0.2 Score=38.43 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=36.5
Q ss_pred eeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCeEEEE
Q 009637 78 QLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGIIHHV 157 (530)
Q Consensus 78 qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~~h~v 157 (530)
.|.++ .+.+++.|+|.......|. ....=.|+|....+.-..... .. . .--..+
T Consensus 10 ~l~v~--~~~~s~~l~W~~P~~~~~~-------~~~~Y~v~y~~~~~~~~~~~~-~~-~---------------~~~~~~ 63 (100)
T d2gysa4 10 SLQVT--KDGDSYSLRWETMKMRYEH-------IDHTFEIQYRKDTATWKDSKT-ET-L---------------QNAHSM 63 (100)
T ss_dssp EEEEC-----CCCEEEEEC---------------CEEEEEEEECSSSCSTTSCE-EE-E---------------ESCSEE
T ss_pred ccEEE--ECCCEEEEEEecCcccCCc-------cceEEEEEEeecccceeceee-cc-c---------------CCceEE
Confidence 45554 4457899999875432111 011345777655433111110 00 0 012367
Q ss_pred EeCCCCCCCEEEEEEee
Q 009637 158 RLTGLEPNNKYYYQCGD 174 (530)
Q Consensus 158 ~l~gL~P~T~Y~Yrvg~ 174 (530)
.|.+|+|++.|.+||..
T Consensus 64 ~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 64 ALPALEPSTRYWARVRV 80 (100)
T ss_dssp ECCCCCSSCCCEEEEEE
T ss_pred EeCCCCCCCeEEEEEEE
Confidence 89999999999999964
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.47 E-value=0.45 Score=36.27 Aligned_cols=83 Identities=7% Similarity=-0.015 Sum_probs=41.4
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCC-CCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccC
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGD-NIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSG 152 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~-~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~ 152 (530)
..|++|.+....+++.+.|+|......... ... ...=.|+|....+.......-. .
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~-----~L~Yev~y~~~~~~~~~~~~~~-----------------~- 59 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYF-----SLTFCVQVQGKSKREKKDRVFT-----------------D- 59 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTTS-----CEEEEEEEECC------CEEEE-----------------S-
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeE-----EEEEEEEEEECCCCccEEeccc-----------------c-
Confidence 369999998776677899999875421100 000 1123577766554322221100 0
Q ss_pred eEEEEEeCCCCCCCEEEEEEeeCC---CCCCCce
Q 009637 153 IIHHVRLTGLEPNNKYYYQCGDPS---IPAMSDV 183 (530)
Q Consensus 153 ~~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~ 183 (530)
.++..|.|++.|.+||.... .+.||+.
T Consensus 60 ----~t~~~L~p~~~Y~v~VRa~~~~~~g~WSeW 89 (94)
T d3d85d3 60 ----KTSATVICRKNASISVRAQDRYYSSSWSEW 89 (94)
T ss_dssp ----SSEEEECCCSSCEEEEEEEESSSCCCCCCC
T ss_pred ----ceEEEecCCCCEEEEEEEecCCCCCCCccC
Confidence 01135789999999997532 1356654
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.07 E-value=0.55 Score=44.71 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEcccc
Q 009637 389 RVEMEALLYSYGVDIVFNGHVH 410 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H 410 (530)
.+++++.++++++++++-||.=
T Consensus 233 ~~~~~~Fl~~n~l~lIIR~He~ 254 (324)
T d1s95a_ 233 PDVTKAFLEENNLDYIIRSHEV 254 (324)
T ss_dssp HHHHHHHHHHHTCCEEEECCSC
T ss_pred HHHHHHHHHHcCCcEEEEcCcc
Confidence 3678899999999999999973
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.42 E-value=0.25 Score=41.41 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=26.9
Q ss_pred EEEEeCCCCCCCEEEEEEeeCCCC------CCCceeEEEcCC
Q 009637 155 HHVRLTGLEPNNKYYYQCGDPSIP------AMSDVYYFRTLP 190 (530)
Q Consensus 155 h~v~l~gL~P~T~Y~Yrvg~~~~~------~~S~~~~F~T~p 190 (530)
.+.+|+||+|+|.|.+||.+-+.. ..+....|||+|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 467899999999999999643211 245677888876
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.15 E-value=0.69 Score=43.25 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.++++++++++-||.=.
T Consensus 217 ~~~~~~Fl~~n~l~~IIR~He~~ 239 (288)
T d3c5wc1 217 QDISETFNHANGLTLVSRAHQLV 239 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCcEEEcCCCcC
Confidence 35788899999999999998743
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.09 E-value=1.5 Score=32.97 Aligned_cols=28 Identities=11% Similarity=0.020 Sum_probs=20.5
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCCCCCCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPSIPAMS 181 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~~~~~S 181 (530)
.....+.+|.+++.|++||.+.+..+.|
T Consensus 56 ~~~~~~~~l~~~~~Y~fRV~A~n~~g~S 83 (98)
T d1fyhb1 56 YCNISDHVGDPSNSLWVRVKARVGQKES 83 (98)
T ss_dssp EEECGGGCCSTTSCEEEEEEEEETTEEC
T ss_pred eeeeEecccCCCCEEEEEEEEEcCCccc
Confidence 3455678999999999999865433333
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=84.82 E-value=0.66 Score=43.53 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHA 411 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ 411 (530)
.+++++.+++++.++++-||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~IIR~He~~ 246 (294)
T d1jk7a_ 224 AEVVAKFLHKHDLDLICRAHQVV 246 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHHHHHCCCCEEEEcCccc
Confidence 36788999999999999999754
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.23 E-value=0.89 Score=34.27 Aligned_cols=76 Identities=7% Similarity=-0.117 Sum_probs=43.3
Q ss_pred CCCceeEEeecCCCCeEEEEEEcCCCccCCCCCCCCCCCCccEEEEecCCCCcceEEEEEEEEeeeccccCCccccccCe
Q 009637 74 FEPEQLSVSLSFNHDSIWITWITGEFQIGDNIKPLDPKTVASFVRYGTSRTNLNHEATGHSLVYDQLYPFEGLQNYTSGI 153 (530)
Q Consensus 74 ~~P~qi~l~~~~~~~~m~V~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~a~g~~~~y~~~~~~~g~~~~~~~~ 153 (530)
..|..+.+.-.. .++|.++|.-... -|. + ..-.|+|........... ....+ -
T Consensus 5 ~~P~n~~~~~~~-~~si~~~W~p~~~-~~~------~--~~y~v~~~~~~~~~~~~~----------~~~~~-------~ 57 (95)
T d1bqua1 5 EKPKNLSCIVNE-GKKMRCEWDGGRE-THL------E--TNFTLKSEWATHKFADCK----------AKRDT-------P 57 (95)
T ss_dssp CCCEEEEEEEET-TSCCEEEEECCSC-CSS------C--CEEEEEEEETTEECCCEE----------CCSSC-------T
T ss_pred CCCeeeEEEEcc-CCEEEEEEeCccc-CCC------c--eEEEEEEEEcccceeEee----------ccccc-------c
Confidence 467888776544 6889999986532 111 1 234555555432211110 00111 1
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS 176 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~ 176 (530)
-....+.+|+|++.|++||.+.+
T Consensus 58 ~~~~~~~~L~~~~~Y~f~V~A~N 80 (95)
T d1bqua1 58 TSCTVDYSTVYFVNIEVWVEAEN 80 (95)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEE
T ss_pred eeeeeeeecCCCcEEEEEEEEEe
Confidence 12345689999999999998655
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.38 E-value=1.6 Score=34.10 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=22.4
Q ss_pred EeCCCCCCCEEEEEEeeCC---CCCCCceeEEEcCC
Q 009637 158 RLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRTLP 190 (530)
Q Consensus 158 ~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T~p 190 (530)
.+.+|+|+|.|.+||...+ .+.+|+...+.+..
T Consensus 75 ~~~~L~p~t~Y~~~V~A~n~~G~G~~S~~v~v~~~~ 110 (117)
T d1wj3a_ 75 AELVLPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEECCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEeeccCCcEEEEEEEEEcCCccCCCCCCEEEeccC
Confidence 3458999999999997432 23567666664443
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.05 E-value=0.055 Score=42.38 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=24.7
Q ss_pred EEEEEeCCCCCCCEEEEEEeeCC---CCCCCceeEEEc
Q 009637 154 IHHVRLTGLEPNNKYYYQCGDPS---IPAMSDVYYFRT 188 (530)
Q Consensus 154 ~h~v~l~gL~P~T~Y~Yrvg~~~---~~~~S~~~~F~T 188 (530)
.+.+.|.+|+|++ |.+||..-+ .+.+|+...|.|
T Consensus 62 ~~~~~~~~L~~~t-Y~~rV~A~n~~G~g~~S~~v~f~~ 98 (102)
T d2dtge1 62 ERGCRLRGLSPGN-YSVRIRATSLAGNGSWTEPTYFYV 98 (102)
T ss_dssp TTCCCCCSCCSSE-ECCCCCEEETTBCCCCCCCCEECC
T ss_pred eEEEEEeccceee-EEEEEEEEcCCccCCCCCCEEEEc
Confidence 3567789999975 999986432 235788888877
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.96 E-value=1.1 Score=44.45 Aligned_cols=25 Identities=8% Similarity=0.006 Sum_probs=21.0
Q ss_pred HHHHHHHHHHcCCcEEEEccccCce
Q 009637 389 RVEMEALLYSYGVDIVFNGHVHAYE 413 (530)
Q Consensus 389 r~~l~~ll~k~~VdlvlsGH~H~ye 413 (530)
.+++.+.|++++.++++-||.=.-+
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~ 273 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDA 273 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTT
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhh
Confidence 3678899999999999999986443
|