Citrus Sinensis ID: 009648

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530
Protein Sequence
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccccccccHHHHHccccEEEEcccccccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccEEEccccccccccccHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEcccccEEEcccccccccEEEcccccccEEEccccccccccccccccccccccccccccHHHcccccccccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHccccccccccccccccccEEEEEccccHHHHHHHHccccEEEEEcccccccccccccccHccHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHccHHHHccEEEEEccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccHHHcccccccccEEHccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccEEHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccc
Coil and Loop (DISEMBL)
meicslqsqtlstipsplsrnglivksfgscqilkfpsskkfshprklklpdfkaqasgtinicseavgatptkadskddnlaFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLdgelankgiqpveMLELVECDLEKRvqiepalgnaSVVICCIgasekevfditgpyridfqATKNLVDAATIAKVNHFIMVSslgtnkfgfpAAILNLFWGVLLWKRKAEEALIasglpytivrpggmerptdaykethnitlsqedtlfggqvSNLQVAELLACMAKNRSLSYCKVVEVIAettapltpMEELLAkipsqraepkesiapeksdpaasksmiseessapiteepvqtkakvtdplspytsyedlkpptsptptapsgkkdstivdglpmsgisdaqtstsgvktgitetvsapeelskarplspyfayedlkppsspsptpsgpkevlssssttgevasqltggndvaktpdtslveknpivnsihhhspyhmyedlkpptspipspkky
Flexible Loop (DISEMBL)
meicslqsqtlstipsplsrNGLIVKSFGSCQILKfpsskkfshprkLKLPDFKAQASGTINICSEAVGAtptkadskddNLAFVagatgkvgsrtvRELLKLgfrvragvrsvqraeNLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIasglpytivrpggMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIpsqraepkesiapeksdpaaskSMISEEssapiteepvqtkakvtdPLSPytsyedlkpptsptptapsgkkdSTIVDGLPMSGIsdaqtstsgvktgitetvsapeelskarpLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEvasqltggndvaktpdtSLVEKNPIVNSIHHhspyhmyedlkpptspipspkky
Low Complexity Region (SEG)
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKpptsptptapsGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKppsspsptpsgpKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLkpptspipspkkY
Disordered region (IsUnstruct)
********************NGLIVKSFGSCQILKF**********************GTINICSEAV************NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME***DAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL*********************************************************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
***************************F******************************************************AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA****QS*KQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKI**************************************************YTSYE********************************************************************************************************************************YHMYEDLK************
Disordered Region (DISEMBL)
**********LSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP*******************************************TDPLSPYTSY*******************STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDL******************************TGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY
Disordered Region (DISPRO)
**ICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKK*************************************DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ******************************************DPLSPYTSYEDLKPPT**************************************************ARPLSPYFAYEDLKPPS***************************************************HHSPYHMYEDLKPPT**IP*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPSPKKY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	530	2.2.26 [Sep-21-2011]
Q8H0U5	641	Protein TIC 62, chloropla	yes	no	0.975	0.806	0.553	1e-151
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.949	0.941	0.565	1e-140
Q8H124	280	Uncharacterized protein A	no	no	0.424	0.803	0.355	1e-25
O80934	325	Uncharacterized protein A	no	no	0.398	0.649	0.262	3e-10
Q94EG6	253	Uncharacterized protein A	no	no	0.433	0.909	0.267	3e-10
P48279	321	Uncharacterized protein y	N/A	no	0.269	0.445	0.306	2e-07

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score =  537 bits (1383), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 306/553 (55%), Positives = 373/553 (67%), Gaps = 36/553 (6%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
            SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-----APSGKKDSTIVDGLPMSGISDA 415
            E P + K     PLSPY SYEDLKPPTSP P      +P+  K+         + +   
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422

Query: 416 QTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPS---------------SPSPT 460
             STS V     + V    E  K RPLSPY  YE+LKPPS               SP PT
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPT 478

Query: 461 PSGPKEVLSSSSTTGE--VASQLTGGNDVAKTPDTSLVEK-----NPIVNSIHHHSPYHM 513
            S   +  + + T  E  VA+ +T  +     P+T++         P  + +   SPY +
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAI 538

Query: 514 YEDLKPPTSPIPS 526
           Y DLKPPTSP P+
Sbjct: 539 YADLKPPTSPTPA 551

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score =  500 bits (1287), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 315/557 (56%), Positives = 371/557 (66%), Gaps = 54/557 (9%)

Query: 1   MEICSLQSQTLSTIPSPLSRNG---------LIVKSFGSCQILKFPSSKKFSHPR----K 47
           ME+ SL S   + IPS L+R           L +  +     +++P +   ++ R     
Sbjct: 3   MEVFSLTS---TAIPSTLTRRDTAADKPSPHLNLSKY--SHFMRYPLTTTLTNNRIRSSS 57

Query: 48  LKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRV 107
                 +AQASG+    S      P K DSKDDNL FVAGATGKVGSRTVREL+KLGF+V
Sbjct: 58  SSSSSIRAQASGSTK--SSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKV 115

Query: 108 RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVV 167
           RAGVR+ Q+A  LVQSVKQ+KLDG  A+ G + VE LE+VECDLEK  QI  ALGNAS V
Sbjct: 116 RAGVRNAQKAGALVQSVKQLKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTV 173

Query: 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNL 227
           IC IGASEKE+FDITGP RID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNL
Sbjct: 174 ICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNL 233

Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 287
           FWGVL+WKRKAEEAL+ASG+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQ
Sbjct: 234 FWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQ 293

Query: 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA 347
           VAEL+A MAKN  LSYCK+VEVIAETTAPLTP E+LL +IPSQR         +K+D A 
Sbjct: 294 VAELMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTAT 353

Query: 348 ------SKSMISEESS-APITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD 400
                 S ++++E  S AP  E   +  AK   PLSPYT+Y+DLKPP+SP+PT PS KK 
Sbjct: 354 VSNTGPSANVVAEVPSIAPQKETASKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQ 413

Query: 401 STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKAR-PLSPYFAYEDLKPPSSPSP 459
             I D +P    SD  +S   +  GI++T S+    SK +  LSPY AY DLK     SP
Sbjct: 414 INISDAVPTPISSDTPSSIQEID-GISQTTSS----SKGKESLSPYAAYPDLK--PPSSP 466

Query: 460 TPSGPKEVLSSSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHH-------SPYH 512
           +PS P   LS   T   V S        +  P    VE  P     H H       SPY 
Sbjct: 467 SPSVPTTSLSKRDTV--VVS--------SNGPAQLSVEDTPKNEEQHLHEPKSRPLSPYA 516

Query: 513 MYEDLKPPTSPIPSPKK 529
           MYEDLKPP SP PS +K
Sbjct: 517 MYEDLKPPASPSPSFRK 533

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Pisum sativum (taxid: 3888)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score =  118 bits (295), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 28/253 (11%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           FVAGATG+ G R V +LL  GF V+AGVR V++A+   +    +++      +G  P ++
Sbjct: 50  FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            E++  D             +  VIC  G   +  FDI  P+++D   T NLVDA     
Sbjct: 108 AEVIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQG 152

Query: 204 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
           V  F++VSS+  N         PA + LNLF   L+ K +AE+ +  SG+ YTIVRPGG+
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGL 212

Query: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317
           +        T N+ +  EDTL+ G +S   VAE +A  A  +  S  KVVE++A   AP 
Sbjct: 213 KNDP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPK 267

Query: 318 TPMEELLAKIPSQ 330
              ++L A +  Q
Sbjct: 268 RSYKDLFASVKGQ 280

Arabidopsis thaliana (taxid: 3702)

>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 52/263 (19%)

Query: 43  SHPRKLKLPDFKAQASGTINIC--------SEAVGATPTKADSKDDNLAFVAGATGKVGS 94
           S PR   L  F++  S + +IC        +  V  T + A + +     V GA G+ G 
Sbjct: 32  SVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAGGRTGQ 90

Query: 95  RTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
              ++L +    F  R  VR+ +  E         K++GE            E+   D+ 
Sbjct: 91  IVYKKLKERSEQFVARGLVRTKESKE---------KINGED-----------EVFIGDIR 130

Query: 153 KRVQIEPALGNASVVICCIGA-------------SEKEVFDITGPY--RIDFQATKNLVD 197
               I PA+     ++    A                E F   G Y  ++D+   KN +D
Sbjct: 131 DTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190

Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
           AA  A V   ++V S+G      P  +I N    +L+WKRKAE+ L  SG+PYTI+R GG
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGG 248

Query: 257 MERPTDAYKETHNITLSQEDTLF 279
           ++      +E   + + ++D L 
Sbjct: 249 LQDKDGGIRE---LLVGKDDELL 268

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1

 Score = 67.0 bits (162), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 32/262 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
            V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N  
Sbjct: 8   LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66

Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
            Q ++ L ++   + K +   +P  G     I   G           P ++D+   KN +
Sbjct: 67  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117

Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
           DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176

Query: 257 MERPTDAYKETHNITLSQEDTLFG--------GQVSNLQVAELLACMAKNRSLSYCKVVE 308
           +       +E   + + ++D L            V+ + +  LL   AKN++       E
Sbjct: 177 LLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 233

Query: 309 VIAETTAPLTPMEELLAKIPSQ 330
               T+ P    + L +++ S+
Sbjct: 234 ---GTSTPTKDFKALFSQVTSR 252

Arabidopsis thaliana (taxid: 3702)

>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1

 Score = 58.2 bits (139), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 30/173 (17%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G + VR  L  G++VR  VR++++A  L +   ++ + G+L+    QP  +L
Sbjct: 5   VIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFLKEWGAKL-IWGDLS----QPESLL 59

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
                         PAL    V+I     S     D  G Y++D +  K L+DAA   K+
Sbjct: 60  --------------PALTGIRVII---DTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKI 102

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
             FI  S L + K+     ++ +       K   EE L  SGL YTI +  G 
Sbjct: 103 EKFIFFSILNSEKYS-QVPLMRI-------KTVTEELLKESGLNYTIFKLCGF 147

Cyanophora paradoxa (taxid: 2762)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	530
255556137	584	NAD dependent epimerase/dehydratase, put	0.981	0.890	0.647	1e-179
224103467	564	predicted protein [Populus trichocarpa]	0.962	0.904	0.593	1e-173
224080277	517	predicted protein [Populus trichocarpa]	0.954	0.978	0.626	1e-168
225428568	529	PREDICTED: protein TIC 62, chloroplastic	0.967	0.969	0.618	1e-161
147770508	535	hypothetical protein VITISV_033052 [Viti	0.833	0.826	0.629	1e-152
297830550	668	catalytic/ coenzyme binding protein [Ara	0.983	0.779	0.542	1e-151
157849706	624	catalytic/coenzyme binding protein [Bras	0.964	0.818	0.555	1e-150
356545313	528	PREDICTED: uncharacterized protein LOC10	0.967	0.971	0.590	1e-150
30685117	641	Rossmann-fold NAD(P)-binding domain-cont	0.975	0.806	0.553	1e-150
356541105	529	PREDICTED: uncharacterized protein LOC10	0.969	0.971	0.579	1e-148

>gi|255556137|ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223541766|gb|EEF43314.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]

 Score =  633 bits (1633), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 342/528 (64%), Positives = 403/528 (76%), Gaps = 8/528 (1%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME  SLQS  ++TIP+ L+++G + K+F   Q+++F S  K+ H RK++    KAQASG 
Sbjct: 1   MERYSLQSSAITTIPTSLTKSGFLHKTFLHGQLIRFSSFSKYPHARKIRTFGIKAQASGV 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S A+ A P + D KDDNLAFVAGATG+VGSRTVRELLKLGF+VRAGVRS QRA+ L
Sbjct: 61  TKFSSGAIEAIPKETDIKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSVKQMKLDGE    G QP+E  E++ECDL+K  +I  ALGNAS+VICCIGA EKEVFD
Sbjct: 121 VQSVKQMKLDGE----GAQPIEKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
            TGPYRID+QAT+NL+DAAT+AKV HFIMVSSLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 FTGPYRIDYQATRNLIDAATVAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGGQVSNLQVAEL+A MAKN  
Sbjct: 237 ALIASGIPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLD 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISE--ESSA 358
           LSYCKVVEVIAETTAPLT M++LL +IPSQR +PKE  A E  +PA S  ++ E  E ++
Sbjct: 297 LSYCKVVEVIAETTAPLTTMDKLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTS 356

Query: 359 PITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPS-GKKDSTIVDGLPMSGISDAQT 417
            I +EP Q KA V+ PLSPYT+Y+DLKPPTSP P  PS G + S+ VD +      DAQT
Sbjct: 357 AIEKEPEQPKATVSRPLSPYTAYDDLKPPTSPIPIRPSGGNQSSSPVDAVAKPDTIDAQT 416

Query: 418 STSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEV 477
           S+SG+ + I E+  A  E   A PLSPY AY DLKPP+SPSP PSG KE+ S +S+T +V
Sbjct: 417 SSSGLASAIPESKPATVEAKIAGPLSPYAAYPDLKPPTSPSPKPSGSKEIPSGASSTEKV 476

Query: 478 ASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIP 525
            S  TG NDVA     +  E NP       HSP+ +Y+DLKPPTSP P
Sbjct: 477 ESSATGDNDVATITANNDAE-NPPPEFSSGHSPFLVYDDLKPPTSPSP 523

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103467|ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1| predicted protein [Populus trichocarpa]

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 345/581 (59%), Positives = 397/581 (68%), Gaps = 71/581 (12%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME CSLQS  ++TIP+ L++ G I K     Q LKFP+  KF+H RKLK+ D KAQAS  
Sbjct: 1   MESCSLQSSAITTIPTSLTKCGFIEKPSIHGQFLKFPNLSKFAHSRKLKILDIKAQAS-- 58

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  V A   + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 59  -------VEAISKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 111

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
            QSVK+MKLD E    G QPVE LE VECDLEK  QI PALGNASVV+CCIGASEKEVFD
Sbjct: 112 AQSVKEMKLDVE----GSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFD 167

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGP RID++ATKNLVDAAT+AKV+HFIMVSSLGTNKFGFPAAILNLFWGVL+WKRKAEE
Sbjct: 168 VTGPCRIDYRATKNLVDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEE 227

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHN+T+S+EDTLFGGQVSNLQVAE +A MAKNR 
Sbjct: 228 ALIASGVPYTIVRPGGMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRG 287

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPK+S A E       K +  E  S P 
Sbjct: 288 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPS 347

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTS 420
             EP Q KA VT PLSPYT+YEDLKPPTSP PT PSGKK++  V+ +    + D    + 
Sbjct: 348 QREPAQAKAVVTRPLSPYTAYEDLKPPTSPIPTQPSGKKEN--VNSVEAVSMLDTPDPSP 405

Query: 421 GVKTGITETVSAPEELSKARPLSPYFAYEDLK---------------------------- 452
              +GI ET  AP E   ARPLSPY AY+DLK                            
Sbjct: 406 ASASGIAETKPAPVETKTARPLSPYVAYDDLKPPTSPSPTAPVGLVAITAPAVPKTGNSA 465

Query: 453 PPSS---------PSPTPSGPKEVLSS---------SSTTGEVASQLTGGNDVAKTPDTS 494
           PP++         P+P P  P  +            ++  G VA+  +  N V+KT + +
Sbjct: 466 PPTAAIDNQHHEEPNPRPLSPYPIYDDLKPPTSPSPTAPVGLVATT-SSINAVSKTGNNA 524

Query: 495 LVEKNPIVNSIHHH-------SPYHMYEDLKPPTSPIPSPK 528
                  +++ HH        SPY MYEDLKPP SP PS K
Sbjct: 525 --PPTAAIDNQHHKEPNPRPLSPYPMYEDLKPPASPTPSLK 563

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080277|ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1| predicted protein [Populus trichocarpa]

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 337/538 (62%), Positives = 379/538 (70%), Gaps = 32/538 (5%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME   LQS  ++TIP+ L++ G I KS    Q+LKFP   KF H RKLK+ D KAQAS  
Sbjct: 1   MEGGCLQSSAITTIPTSLTKCGFIEKSCIHGQLLKFPHFNKFPHSRKLKILDIKAQASVA 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S AV A   + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 61  AKFRSGAVEADSKEVETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSV  MKLD E    G QPVE L++VECDLEK  QI PALGNASV++CCIGA EKEVFD
Sbjct: 121 VQSVMAMKLDVE----GSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGPYRID+ ATKNLVDAAT  KVNHFIMVSSLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGG VSNLQVAEL+A MA NR 
Sbjct: 237 ALIASGVPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRR 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPKE  A +   P   K +  +  S+P 
Sbjct: 297 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPS 356

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTS 420
            +EP Q KA VT PLSPYT+Y+DLKPPTSPTP  PS KK+S      P+  +S   T  +
Sbjct: 357 QKEPAQAKAMVTRPLSPYTAYDDLKPPTSPTPIQPSSKKES----AGPLEAVSKPATQDT 412

Query: 421 --GVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVA 478
                 G+ ET   P E    RPLSPY AY DLK P +     +    V+ +SST    A
Sbjct: 413 PPMPAPGVAETKPGPVETKTTRPLSPYAAYADLK-PPTSPSPTAPVGSVIPTSSTN---A 468

Query: 479 SQLTGGNDVAKTPDTSLVEKNPIVNSIHHH--------SPYHMYEDLKPPTSPIPSPK 528
              TG       P  + ++K        HH        SPY MYEDLKPP SP PS K
Sbjct: 469 VPETGNR---APPMAAAIDK-------QHHTEPKQKPLSPYPMYEDLKPPASPTPSLK 516

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225428568|ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera] gi|297741413|emb|CBI32544.3| unnamed protein product [Vitis vinifera]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 334/540 (61%), Positives = 385/540 (71%), Gaps = 27/540 (5%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME+ SLQS T+++IP      G I K F   Q+L+ PSS++    RKL + +F+AQA+GT
Sbjct: 1   MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  +GA   KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61  TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           +QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL+A MAKNR 
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRG 300

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPA----ASKSMISEES 356
            SYCKVVEVIAETTAPLTP  ELLAKIPSQR +    ++P++SD A        +     
Sbjct: 301 SSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VSPKESDAADGPAPVPVVSGPPP 356

Query: 357 SAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTI--VDGLPMSGISD 414
           S PI + P Q KA    PLSPY  YEDLKPPTSPTPT  +    +    VDG+P    S 
Sbjct: 357 STPIEKGPPQGKATAMSPLSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSI 416

Query: 415 AQT----STSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSS 470
                  ST   K  I       EE  K RPLSPY  Y+DLKPP+SPS        V   
Sbjct: 417 PSVLEPLSTVLAKEAIQ------EEAKKTRPLSPYIVYDDLKPPTSPS---PSAPTVSLP 467

Query: 471 SSTTGEVASQLTG--GNDVAKTP--DTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 526
           S+   E  S++    GN+ A+ P  D    E++ +       SP+ MYEDLKPPTSP PS
Sbjct: 468 STLPMEGGSKIDNISGNNTAQPPAADIPKDEQHHVQAKPRPLSPFTMYEDLKPPTSPSPS 527

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147770508|emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 304/483 (62%), Positives = 345/483 (71%), Gaps = 41/483 (8%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME+ SLQS T+++IP      G I K F   Q+L+ PSS++    RKL + +F+AQA+GT
Sbjct: 1   MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
                  +GA   KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61  TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           +QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL-------------- 286
           AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL              
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQMQTWLKKLNATPK 300

Query: 287 -------QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIA 339
                  QVAEL+A MAKNR  SYCKVVEVIAETTAPLTP  ELLAKIPSQR +    ++
Sbjct: 301 VTFVNKFQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VS 356

Query: 340 PEKSDPA----ASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAP 395
           P++SD A        +     S PI + P Q KA    PLSPY  YEDLKPPTSPTPT  
Sbjct: 357 PKESDAADGPXPVPVVSGPPPSTPIEKGPPQGKATAMSPLSPYIVYEDLKPPTSPTPTPS 416

Query: 396 SGKKDSTI--VDGLPMSGISDAQT----STSGVKTGITETVSAPEELSKARPLSPYFAYE 449
           +    +    VDG+P    S        ST   K  I       EE  K RPLSPY  Y+
Sbjct: 417 TSSSTARAPDVDGIPAEPKSIPSVLEPXSTVLAKEAIQ------EEAKKTRPLSPYIVYD 470

Query: 450 DLK 452
           DLK
Sbjct: 471 DLK 473

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830550|ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297328997|gb|EFH59416.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 309/570 (54%), Positives = 372/570 (65%), Gaps = 49/570 (8%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGLKNHSVSGKSRSFDLSIRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A P   +SK+D+L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSAVTEANPANLNSKEDDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGAQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFG PAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGLPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
           ASGL Y IVRPGGMERPTDAYKETHN+TLS +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ASGLNYAIVRPGGMERPTDAYKETHNLTLSLDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLT +E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTSIEKLLEKIPSKRPYVPPPKASVAAKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTA-----PSGKKDSTIVDGLPMSGISDA 415
            E P + K     PLSPY +YEDLKPPTSP P++     P+  K+      L  + +   
Sbjct: 363 DEAPPKEKDVKPRPLSPYAAYEDLKPPTSPIPSSTTSVGPAKSKEVDATQVLVEANVVPV 422

Query: 416 QTSTSGVKTGITETVSAPE--------ELSKARPLSPYFAYEDLKPPSSPSPTPSGPKE- 466
             STS V     E V            E  K RPLSPY  YEDLKPPS PSPT SG K+ 
Sbjct: 423 PDSTSNVPVVEEEEVKQAVEEVEVMQAEEKKERPLSPYARYEDLKPPSLPSPTASGTKKN 482

Query: 467 -------------------------VLSSSSTTGEVASQLTGGNDVAKTPDTSLVEK--- 498
                                     + +S+T   V + +T      + P+T+       
Sbjct: 483 DSLSPGPTDSDTDKSSTVATSVTETAVETSATETAVETSVTETAVETRVPETAAASSFTE 542

Query: 499 --NPIVNSIHHHSPYHMYEDLKPPTSPIPS 526
              P    +   SPY +Y DLKPPTSP P+
Sbjct: 543 TAAPATPRMRPLSPYAVYADLKPPTSPTPA 572

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157849706|gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa]

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 314/565 (55%), Positives = 378/565 (66%), Gaps = 54/565 (9%)

Query: 6   LQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLK-LPDFKAQAS--GTIN 62
           L+ Q L+T+PS L R   +++ + + +I++F   K  S   K +   D   +AS  G I 
Sbjct: 7   LRGQPLTTVPS-LPRQRFLLQGWKNNRIVRFSGLKNHSDSIKSRSFFDLSLRASDKGPIK 65

Query: 63  ICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122
             S    A+PT ++SK+ +L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA+ LVQ
Sbjct: 66  ASSAVTDASPTNSESKEQDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAKGLVQ 125

Query: 123 SVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDIT 182
           SVK M  D     +G QPVE LE+VECDLEK+  I+PALGNASVVICCIGASEKE+ DIT
Sbjct: 126 SVKDMNTD-----EGTQPVEKLEVVECDLEKKDSIQPALGNASVVICCIGASEKEISDIT 180

Query: 183 GPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL 242
           GPYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEAL
Sbjct: 181 GPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEAL 240

Query: 243 IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS 302
           IASGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS
Sbjct: 241 IASGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLS 300

Query: 303 YCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKES-----IAPEKSDPAASKSMISE 354
             K+VEV+AETTAPLTP+E+LL KIPS+R     PKES     + P  ++P   +S+ ++
Sbjct: 301 CSKIVEVVAETTAPLTPIEKLLKKIPSKRPYVPPPKESVPAKEVTPVPAEPVKQESVAAK 360

Query: 355 ES----SAPITEEPVQTK-----AKVTD----PLSPYTSYEDLKPPTSPTPTAPSGKKDS 401
           E     + P+T+EP   K     A+V D    PLSPY +YEDLKPPTSP P    G   +
Sbjct: 361 EVTPVLTEPVTKEPTAPKEDKAPAEVKDVKPRPLSPYAAYEDLKPPTSPIPATALGATKA 420

Query: 402 TIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELS-------------KARPLSPYFAY 448
             VD  P+  + + Q   + V+        +P E S             K RPLSPY +Y
Sbjct: 421 KEVDATPVPEVEETQ---APVEANAVPPPESPVETSVPVVEEVKQVEEKKERPLSPYASY 477

Query: 449 EDLKPPSSPSPTPSGPKEVLSSSSTTGEVASQL-TGGNDVAKTPDTSLVEKNPIVNSIHH 507
           E+LKPPSSP+P  SG    +  S T   V +   TG +    T  T   E  P +  +  
Sbjct: 478 ENLKPPSSPTPKASG----IQKSDTLAPVPTDSDTGESSTVATTVTEEAEAPPAIPKMRP 533

Query: 508 HSPYHMYEDLKPPTSPIPS---PKK 529
            SPY  Y DLKPPTSP P+   PKK
Sbjct: 534 LSPYAAYADLKPPTSPTPASTGPKK 558

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545313|ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 317/537 (59%), Positives = 377/537 (70%), Gaps = 24/537 (4%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQI-----LKFPSSKKFSHPRKLKLPDFKA 55
           ME  S+QS T +TIPS LSR G   K   +  +     +++P + + +   K K+   +A
Sbjct: 1   MEAFSVQSLTATTIPSSLSRRGATDKPSATSHVNLSHFMRYPCTTRST---KQKILCTRA 57

Query: 56  QASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115
           QASG+    + +      K DSKDDNL FVAGATG+VGSRTVREL+KLGFRVRAGVRS Q
Sbjct: 58  QASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQ 117

Query: 116 RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASE 175
           RA  LVQSV+Q+KLDG  A+ G Q VE LE+VECDLEK   I  ALG+AS VIC IGASE
Sbjct: 118 RAGALVQSVEQLKLDG--ASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASE 175

Query: 176 KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235
           KEVFDITGP+RID+QATKNL+DAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL+WK
Sbjct: 176 KEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWK 235

Query: 236 RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295
           RKAEEAL+ASGLPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA M
Sbjct: 236 RKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVM 295

Query: 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMI 352
           AKNR LSYCK+VE IAETTAPLTPMEELLAKIPSQR   + PK+      S P    +++
Sbjct: 296 AKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVV 355

Query: 353 SEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGI 412
           + E      +E  Q K     PLSPY  Y+DLKPP+SP+P+ P G K + I + +P    
Sbjct: 356 TVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPPSSPSPSQPGGGKPTKISETVPKPSA 415

Query: 413 SDAQTSTSGVKTGITETVSAPEELSKA-RPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSS 471
           SD  +S  GV  GI++T S+    SK  +PLSPY AY DLKPP+SPS  P+ P   +S+ 
Sbjct: 416 SDTPSSVPGVD-GISQTTSS----SKVEKPLSPYVAYPDLKPPTSPS--PNAPTVSVSTP 468

Query: 472 STTG--EVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 526
           +  G  E+ +  + G       D    E  P   S    SPY MYEDLKPP SP PS
Sbjct: 469 AAAGVPEIDTISSNGPAQLSAADEPKEEHLPEPKS-RPLSPYTMYEDLKPPASPSPS 524

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30685117|ref|NP_188519.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|75151827|sp|Q8H0U5.1|TIC62_ARATH RecName: Full=Protein TIC 62, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 62; Short=AtTIC62; Flags: Precursor gi|25083201|gb|AAN72050.1| Unknown protein [Arabidopsis thaliana] gi|30725480|gb|AAP37762.1| At3g18890 [Arabidopsis thaliana] gi|332642643|gb|AEE76164.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 306/553 (55%), Positives = 373/553 (67%), Gaps = 36/553 (6%)

Query: 4   CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
           C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct: 5   CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query: 64  CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
            S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65  SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
           VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
           PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
            SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
            K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K +  E ++   
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-----APSGKKDSTIVDGLPMSGISDA 415
            E P + K     PLSPY SYEDLKPPTSP P      +P+  K+         + +   
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422

Query: 416 QTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPS---------------SPSPT 460
             STS V     + V    E  K RPLSPY  YE+LKPPS               SP PT
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYENLKPPSSPSPTASSTRKSDSLSPGPT 478

Query: 461 PSGPKEVLSSSSTTGE--VASQLTGGNDVAKTPDTSLVEK-----NPIVNSIHHHSPYHM 513
            S   +  + + T  E  VA+ +T  +     P+T++         P  + +   SPY +
Sbjct: 479 DSDTDKSSTVAKTVTETAVATSVTETSVATSVPETAVATSVTETAAPATSKMRPLSPYAI 538

Query: 514 YEDLKPPTSPIPS 526
           Y DLKPPTSP P+
Sbjct: 539 YADLKPPTSPTPA 551

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541105|ref|XP_003539023.1| PREDICTED: uncharacterized protein LOC100802919 [Glycine max]

 Score =  530 bits (1365), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 311/537 (57%), Positives = 368/537 (68%), Gaps = 23/537 (4%)

Query: 1   MEICSLQSQTLSTIP-SPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASG 59
           ME  S+QS T +TIP S LSR     K   +  +       ++    K K+   +AQASG
Sbjct: 1   MEAFSVQSLTATTIPTSSLSRRAATDKPSATSHV-NLSHFTRYPCTTKHKIRCTRAQASG 59

Query: 60  TINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN 119
           +   C+        K DSKDDNL FVAGATG+VGSRTVREL+KLGFRVRAGVRS QRA  
Sbjct: 60  STKSCTGTAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQRAGA 119

Query: 120 LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF 179
           LVQSV+Q+KLDG  AN G+Q VE LE+VECDLEK   I  ALGNAS VIC IGASEKEVF
Sbjct: 120 LVQSVEQLKLDG--ANGGVQAVEKLEIVECDLEKPETIGSALGNASTVICSIGASEKEVF 177

Query: 180 DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE 239
           DITGP+RID+ ATKNL+DAAT+ KVNHFI+V+SLGTNK GFPAAILNLFWGVL+WKRKAE
Sbjct: 178 DITGPFRIDYLATKNLIDAATVTKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAE 237

Query: 240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299
           EAL+ASGLPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA MAKNR
Sbjct: 238 EALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVMAKNR 297

Query: 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKS-----DPAASKSM 351
            LSYCK+VE IAETT+PLTPME LLA+IPSQR   + PK    P+ +     DP A  ++
Sbjct: 298 DLSYCKIVEAIAETTSPLTPMEGLLARIPSQRPYISSPKVIQKPDIAVVSIPDPPA--NV 355

Query: 352 ISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSG 411
           +++E      +E  Q K     PLSPY  Y+DLKPP+SP+P+ P G K + I + +P   
Sbjct: 356 VAKEPKVATQQETAQPKPVANQPLSPYIVYDDLKPPSSPSPSQPGGGKQTKISETVPQPS 415

Query: 412 ISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSS 471
            SD  +S  GV      T S+  E    +PLSPY  Y DLKPP+SPS  P+ P   +S+ 
Sbjct: 416 ASDTPSSVLGVDGDSQTTSSSKVE----KPLSPYVVYPDLKPPTSPS--PNAPTVSVSTP 469

Query: 472 STTG--EVASQLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 526
           +  G  ++ +  + G     T D    E  P   S    SPY MYEDLKPP SP PS
Sbjct: 470 AAAGVPKIDTISSNGPAQLSTADEPKKEHLPEPKST-PLSPYTMYEDLKPPASPSPS 525

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	530
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.930	0.769	0.561	1.8e-133
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.422	0.8	0.314	1e-18
TAIR|locus:2102842	510	PTAC16 "plastid transcriptiona	0.709	0.737	0.266	4.1e-18
TAIR|locus:2185228	253	AT5G02240 [Arabidopsis thalian	0.437	0.916	0.279	1.3e-11
TAIR|locus:2040716	325	AT2G37660 [Arabidopsis thalian	0.516	0.843	0.246	2.9e-11
TAIR|locus:2180019	417	PCB2 "PALE-GREEN AND CHLOROPHY	0.581	0.738	0.267	1e-07
UNIPROTKB|Q71X34	209	LMOf2365_2365 "Putative unchar	0.126	0.320	0.375	0.00073

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 1285 (457.4 bits), Expect = 1.8e-133, Sum P(2) = 1.8e-133
 Identities = 287/511 (56%), Positives = 349/511 (68%)

Query:     4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
             C L+ Q L+TIPS  SR G +++ + + +I++F   K  S   K +  D   +ASG I  
Sbjct:     5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64

Query:    64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
              S    A+PT  +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct:    65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124

Query:   124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
             VK+MKL     ++G QPVE LE+VECDLEK+  I+PALGNASV+ICCIGASEKE+ DITG
Sbjct:   125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182

Query:   184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
             PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct:   183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242

Query:   244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
              SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN  LS+
Sbjct:   243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302

Query:   304 CKVVEVIAETTAPLTPMEELLAKIPSQRA---EPKESIAPEKSDPAASKSMISEESSAPI 360
              K+VEV+AETTAPLTP+E+LL KIPS+R     PK S+A ++  P  +K  +++E +AP 
Sbjct:   303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKP-VTQEPTAPK 361

Query:   361 TEE-PVQTKAKVTDPLSPYTSYEDLK--XXXXXXXXXXXGKKDSTIVDG--LPM-SGISD 414
              +E P + K     PLSPY SYEDLK                 S  VD   +P+ + +  
Sbjct:   362 EDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVP 421

Query:   415 AQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKXXXXXXXXXXXXKEVLSSSSTT 474
                STS V   + E V   EE  K RPLSPY  YE+LK            ++  S S + 
Sbjct:   422 VPDSTSNVP--VVE-VKQVEE-KKERPLSPYARYENLKPPSSPSPTASSTRK--SDSLSP 475

Query:   475 GEVASQLTGGNDVAKTPDTSLVEKNPIVNSI 505
             G   S     + VAKT   + V  +    S+
Sbjct:   476 GPTDSDTDKSSTVAKTVTETAVATSVTETSV 506

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.0e-18, P = 1.0e-18
 Identities = 80/254 (31%), Positives = 123/254 (48%)

Query:    84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
             FVAGATG+ G R V +LL  GF V+AGVR V++A+   +    +++      +G  P ++
Sbjct:    50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107

Query:   144 LELVECDLEKRVQIEPALGNASVVICCIGASEK-EVF-----DITGPYRIDFQATKNLVD 197
              E++  D             +  VIC  G     ++F     D  G   +     K  V+
Sbjct:   108 AEVIGDD-------------SQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVE 154

Query:   198 AATIAKVNHFIMVSSLGTNKFGFPAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                +      I+V+     +   PA + LNLF   L+ K +AE+ +  SG+ YTIVRPGG
Sbjct:   155 KFVLVSS---ILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGG 211

Query:   257 MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316
             ++        T N+ +  EDTL+ G +S   VAE+ A  A  +  S  KVVE++A   AP
Sbjct:   212 LKNDPP----TGNVVMEPEDTLYEGSISRDLVAEV-AVEALLQEESSFKVVEIVARAEAP 266

Query:   317 LTPMEELLAKIPSQ 330
                 ++L A +  Q
Sbjct:   267 KRSYKDLFASVKGQ 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 247 (92.0 bits), Expect = 4.1e-18, P = 4.1e-18
 Identities = 112/421 (26%), Positives = 186/421 (44%)

Query:    49 KLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVR 108
             KLPD K+      N  +  V     K   KD    FVAGATG+ G R  + LL+ GF VR
Sbjct:    63 KLPDMKSLIPVVTNPSTGLVFGNNRK---KDPGTIFVAGATGQAGIRIAQTLLQRGFSVR 119

Query:   109 AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVI 168
             AGV  +  A++L +     K+   L+N     V+ L  V+   +    I  A+GNA+ V+
Sbjct:   120 AGVPDLGAAQDLARVAATYKI---LSN---DEVKRLNAVQSPFQDAESIAKAIGNATKVV 173

Query:   169 CCIGASEKEVFDITGP-YRIDFQATKNLVDAATIAKVNHFIMV--SSLGTNKFGFPAAIL 225
               +GA+E       GP  ++       +V AA +A V+H  +V   ++  + +     I 
Sbjct:   174 VTVGATEN------GPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTISGSTYNVLDGIT 227

Query:   226 NLFWGVLLWKRKAE------EALIASGLPYTIVRPGGME--RPTDAYKETHNITLSQEDT 277
             + F+G L  K +        E +  + + YT+++    E   P  AY    N+ +S E +
Sbjct:   228 S-FFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAY----NVVVSAEGS 282

Query:   278 LFGG--------QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329
               G         +V  L++A L+A +  N +++  KVVEV  + +AP  P++EL + IP 
Sbjct:   283 NSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPE 342

Query:   330 --QRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSY-EDLKX 386
               +R    ++IA E+++  A  +      +A   +E  +   K+++  +   S  ED + 
Sbjct:   343 DGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKLSEKEAEAASLAEDAQQ 402

Query:   387 XXXXXXXXXXG--KKDSTIVDGLPMSGI-SDAQTSTSGVKTGITETVSAPEELSKARPLS 443
                       G   K   I  GL  + + S   T+           V+     +KAR L 
Sbjct:   403 KADAVGVTVDGLFNKAKDISSGLSWNKLGSQFATAIQNASETPKVQVATVRGQAKARNLP 462

Query:   444 P 444
             P
Sbjct:   463 P 463

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 72/258 (27%), Positives = 115/258 (44%)

Query:    85 VAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKGI 138
             V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N   
Sbjct:     9 VTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 67

Query:   139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF-DITGPYRIDFQATKNLVD 197
             Q ++ L ++   + K   ++P            G   + +F D   P ++D+   KN +D
Sbjct:    68 QGIDALVILTSAVPK---MKPGFDPTK------GGRPEFIFEDGQYPEQVDWIGQKNQID 118

Query:   198 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
             AA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG+
Sbjct:   119 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSGTPYTIIRAGGL 177

Query:   258 ERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 312
                    +E     +  L Q DT  +    V+ + +  LL   AKN++       E    
Sbjct:   178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE---G 234

Query:   313 TTAPLTPMEELLAKIPSQ 330
             T+ P    + L +++ S+
Sbjct:   235 TSTPTKDFKALFSQVTSR 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 75/304 (24%), Positives = 137/304 (45%)

Query:    38 SSKKFSHPRKLKLPDFKAQASGTINICSEA--------VGATPTKADSKDDNLAFVAGAT 89
             +S   S PR   L  F++  S + +IC  +        V  T + A + +     V GA 
Sbjct:    27 ASSFVSVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAG 85

Query:    90 GKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG-IQP-VEMLE 145
             G+ G    ++L +    F  R  VR+ +  E  +    ++ + G++ +   I P VE ++
Sbjct:    86 GRTGQIVYKKLKERSEQFVARGLVRTKESKEK-INGEDEVFI-GDIRDTASIAPAVEGID 143

Query:   146 LVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG-PYRIDFQATKNLVDAATIAKV 204
              +        Q++P    +       G   +  FD    P ++D+   KN +DAA  A V
Sbjct:   144 ALVILTSAVPQMKPGFDPSK------GGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGV 197

Query:   205 NHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
                ++V S+G      P  +I N    +L+WKRKAE+ L  SG+PYTI+R GG++     
Sbjct:   198 KQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255

Query:   264 YKETHNITLSQEDTLFGGQVSNLQVAELL-ACM-AKNRSLSYCKVVEVIAETTAPLTPME 321
              +E   + + ++D L   +   +  A++   C+ A     +  K +++ ++     TP +
Sbjct:   256 IRE---LLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTK 312

Query:   322 ELLA 325
             +  A
Sbjct:   313 DFKA 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP;RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2180019 PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 95/355 (26%), Positives = 153/355 (43%)

Query:     1 MEICSLQSQTLSTIPSP--LSRNGLIVKSFGSCQILKFPSSKKF-----SHPRKLKLPDF 53
             M +CS  +   S  P P  + ++   +  F   Q+   P +  F     S   K K    
Sbjct:     1 MSLCSSFNVFASYSPKPKTIFKDSKFISQF---QVKSSPLASTFHTNESSTSLKYKRARL 57

Query:    54 KAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
             K  +S    I   A   +      KD N+  V G+TG +G   V+E++K GF V A  R 
Sbjct:    58 KPISSLDSGISEIATSPSFRNKSPKDINV-LVVGSTGYIGRFVVKEMIKRGFNVIAVARE 116

Query:   114 VQ--RAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-NASVVIC 169
                 R +N   +++KQ  L G  AN     V  L+++E  +E        LG    VV+ 
Sbjct:   117 KSGIRGKNDKEETLKQ--LQG--ANVCFSDVTELDVLEKSIEN-------LGFGVDVVVS 165

Query:   170 CIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK--FGFPAAILNL 227
             C+ +    + D    ++ID++ATKN + A       HF+++S++   K    F  A L  
Sbjct:   166 CLASRNGGIKD---SWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLK- 221

Query:   228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNL 286
             F   L+   + ++    S   Y+IVRP    +      E   +   +   +FG G++   
Sbjct:   222 FEAELMDLAEQQD----SSFTYSIVRPTAFFKSLGGQVEI--VKDGKPYVMFGDGKLCAC 275

Query:   287 Q-VAEL-LACMAKNRSLSYCKVVEV--IAETTAPLTPME--ELLAKIPSQRAEPK 335
             + ++E  LA    +  L   K+ +V  I      LTP+E  E+L KI  +  EPK
Sbjct:   276 KPISEQDLAAFIADCVLEENKINQVLPIGGPGKALTPLEQGEILFKILGR--EPK 328

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA;IMP;TAS

GO:0051744 "3,8-divinyl protochlorophyllide a 8-vinyl reductase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0009073 "aromatic amino acid family biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 87 (35.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
 Identities = 27/72 (37%), Positives = 37/72 (51%)

Query:   187 IDFQATKNLVDAATIAKVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIAS 245
             ID       ++ A    V  FI+VSS G  N    P ++++     L  K+ A+E L  S
Sbjct:    85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIHY----LKAKQAADEELKRS 140

Query:   246 GLPYTIVRPGGM 257
             GL YTIVRP G+
Sbjct:   141 GLDYTIVRPVGL 152

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0U5	TIC62_ARATH	No assigned EC number	0.5533	0.9754	0.8065	yes	no
Q8SKU2	TIC62_PEA	No assigned EC number	0.5655	0.9490	0.9419	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00090558 hypothetical protein (565 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	530
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	0.0
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	3e-59
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	1e-35
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-26
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-21
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	9e-19
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	3e-16
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	5e-16
pfam05368	232	pfam05368, NmrA, NmrA-like family	2e-15
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-14
cd05250	214	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical	6e-14
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	3e-13
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	4e-13
CHL00194	317	CHL00194, ycf39, Ycf39; Provisional	8e-13
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-12
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-12
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	6e-10
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	2e-08
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-08
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-08
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	7e-08
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	2e-07
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	3e-07
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	6e-07
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	1e-06
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	7e-06
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	2e-05
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-04
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	5e-04
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	5e-04
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	6e-04
cd05267	203	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	0.001
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	0.001

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score =  688 bits (1777), Expect = 0.0
 Identities = 346/527 (65%), Positives = 385/527 (73%), Gaps = 13/527 (2%)

Query: 1   MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
           ME  SLQS  ++TIP+ L++ G I K F   Q+L+FP   K  H RKL+  D KAQASG 
Sbjct: 1   MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGA 60

Query: 61  INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
               S A+ A P + D+KD++LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS QRAE+L
Sbjct: 61  TKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL 120

Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
           VQSVKQMKLD E    G QPVE LE+VECDLEK  QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 VQSVKQMKLDVE----GTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFD 176

Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
           +TGPYRID+ ATKNLVDAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE 236

Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           ALIASGLPYTIVRPGGMERPTDAYKETHN+TLS+EDTLFGGQVSNLQVAEL+ACMAKNR 
Sbjct: 237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR 296

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
           LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  PKES A +   P  +K +  E  S PI
Sbjct: 297 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPI 356

Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD-STIVDGLPMSGISDAQTST 419
            EEP Q KA V  PLSPYT+YEDLKPPTSP PT PS     S  VD +      D   S 
Sbjct: 357 EEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPS- 415

Query: 420 SGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEVLSSSSTTGEVAS 479
            G  + + E   A  E  K RPLSPY  YEDLKPP+SPSPT           S +    S
Sbjct: 416 PGSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTG------VSPSVSSTS 469

Query: 480 QLTGGNDVAKTPDTSLVEKNPIVNSIHHHSPYHMYEDLKPPTSPIPS 526
            +    D A     +     P   ++   SPY +Y+DLKPPTSP P+
Sbjct: 470 SVPAVPDTA-PATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPA 515

Length = 576

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score =  194 bits (495), Expect = 3e-59
 Identities = 81/230 (35%), Positives = 103/230 (44%), Gaps = 29/230 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATGKVG   VRELL  G++VRA VR   +AE L  +                    
Sbjct: 3   LVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAG------------------- 43

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            E+V  DL     +  AL     VI   G+  K          +D+    NL+DAA  A 
Sbjct: 44  AEVVVGDLTDAESLAAALEGIDAVISAAGSGGK---GGPRTEAVDYDGNINLIDAAKKAG 100

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
           V  F++VSS+G +K   P   L      L  KRKAE+ L ASGL YTIVRPGG+   TD 
Sbjct: 101 VKRFVLVSSIGADKPSHP---LEALGPYLDAKRKAEDYLRASGLDYTIVRPGGL---TDD 154

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313
              T  + L  + T   G +S   VAE+LA        +  K  E+    
Sbjct: 155 PAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDT-PAAIGKTFELGGGD 203

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score =  133 bits (336), Expect = 1e-35
 Identities = 102/270 (37%), Positives = 141/270 (52%), Gaps = 34/270 (12%)

Query: 70  ATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKL 129
           A+   A++      FVAGATG+ G R V +LL  GF V+AGVR V +A+    S+ Q   
Sbjct: 7   ASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKT---SLPQ--- 60

Query: 130 DGELANKGIQPVEMLELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRI 187
                     P   L++V  D+ E   ++  A+G+ S  VIC  G   +  FD   P+++
Sbjct: 61  ---------DP--SLQIVRADVTEGSDKLVEAIGDDSDAVICATGF--RRSFDPFAPWKV 107

Query: 188 DFQATKNLVDAATIAKVNHFIMVSSLGTN-----KFGFPAAI-LNLFWGVLLWKRKAEEA 241
           D   T NLV+A   A V  FI+VSS+  N     +   PA I LNLF   L+ K +AE+ 
Sbjct: 108 DNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKY 167

Query: 242 LIASGLPYTIVRPGGM-ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
           +  SG+ YTIVRPGG+   P      T NI +  EDTL+ G +S  QVAE +A  A    
Sbjct: 168 IRKSGINYTIVRPGGLTNDPP-----TGNIVMEPEDTLYEGSISRDQVAE-VAVEALLCP 221

Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330
            S  KVVE++A   AP    ++L A I  +
Sbjct: 222 ESSYKVVEIVARADAPKRSYKDLFASIKQK 251

Length = 251

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score =  105 bits (264), Expect = 2e-26
 Identities = 55/176 (31%), Positives = 70/176 (39%), Gaps = 36/176 (20%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATGK G R V+ELL  G +V A  R+  +A                      P   +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----------------------PAPGV 40

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
             V+ DL     +  AL     V+   GA              D    K+L+DAA  A V
Sbjct: 41  TPVQKDLFDLADLAEALAGVDAVVDAFGARPD-----------DSDGVKHLLDAAARAGV 89

Query: 205 NHFIMVSSLGT---NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
              ++VS+ G        F      LF      K  AEE L ASGL +TIVRPG +
Sbjct: 90  RRIVVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGAL 145

Length = 182

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 90.9 bits (226), Expect = 2e-21
 Identities = 55/176 (31%), Positives = 73/176 (41%), Gaps = 27/176 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             + GATG +G    RELL+ G  V   VR+ +R     Q                   E
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQ-------------------E 41

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            + +VE DL     +  A+    VVI   GA      D      +D + T+N+++AA  A
Sbjct: 42  PVAVVEGDLRDLDSLSDAVQGVDVVIHLAGAPR----DTRDFCEVDVEGTRNVLEAAKEA 97

Query: 203 KVNHFIMVSSLGTNKFGFPAA--ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
            V HFI +SSLG             +     L  K K E  L  + LPYTIVRPG 
Sbjct: 98  GVKHFIFISSLGAYGDLHEETEPSPSSP--YLAVKAKTEAVLREASLPYTIVRPGV 151

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 86.2 bits (214), Expect = 9e-19
 Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 39/172 (22%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATGK+G+  V  LL     V A VR+ ++A                A  G+      
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------------KAFAADGV------ 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATIAK 203
           E+ + D +    +E A                 +  I+     D  Q  KN +DAA  A 
Sbjct: 44  EVRQGDYDDPETLERAFEGVDR-----------LLLISPSDLEDRIQQHKNFIDAAKQAG 92

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           V H + +S+ G +      +   L           E+ L ASG+PYTI+RPG
Sbjct: 93  VKHIVYLSASGAD----EDSPF-LLAR---DHGATEKYLEASGIPYTILRPG 136

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 76.9 bits (190), Expect = 3e-16
 Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 47/211 (22%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + GATG+ GS  VRE L  G  V A VR   +                   K       L
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVRDPAKLP-------------AEHEK-------L 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           ++V+ D+     ++ AL     VI  +G           P  +  + T+N+V A   A V
Sbjct: 44  KVVQGDVLDLEDVKEALEGQDAVISALGTRNDL-----SPTTLHSEGTRNIVSAMKAAGV 98

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLL----WKR------KAEEALIASGLPYTIVRP 254
              I+V   G+         + L    LL     +R      +  + L  SGL +T VRP
Sbjct: 99  KRLIVVGGAGS---LDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRP 155

Query: 255 ---------GGMERPTDAYKETHNITLSQED 276
                    GG  R            +S+ D
Sbjct: 156 PALFDGGATGGYYRVELLVDAKGGSRISRAD 186

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 77.3 bits (191), Expect = 5e-16
 Identities = 57/178 (32%), Positives = 69/178 (38%), Gaps = 44/178 (24%)

Query: 85  VAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GATGK G   VR LLK  GF+VRA  R                    LA  G+     
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPSS-----------PAAKALAAPGV----- 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDAA 199
            E+V+ DL+    +E AL     V           E E+           Q  KN+VDAA
Sbjct: 47  -EVVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIA----------QG-KNVVDAA 94

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPG 255
             A V HF+  S     K                +  KA  EE + ASGLP TI+RP 
Sbjct: 95  KRAGVQHFVFSSVPDVEKLTLAVPH---------FDSKAEVEEYIRASGLPATILRPA 143

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 56/174 (32%), Positives = 68/174 (39%), Gaps = 36/174 (20%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG  G   VR  LK G  VRA VR  +    L +S+K               V   
Sbjct: 3   VFGATGYQGGSVVRASLKAGHPVRALVRDPKSE--LAKSLKA------------AGV--- 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIG-ASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           ELVE DL+    +  AL    VV    G    KE+ D            K L DAA  A 
Sbjct: 46  ELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIED-----------GKKLADAAKEAG 94

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPYTIVRPG 255
           V HFI  S  G +          +   V  +  K + E  + A G+PYT V  G
Sbjct: 95  VKHFIP-SEFGND----VDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAG 143

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 30/178 (16%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G   V  L K G +V    R    A       +++ + G+L    +      
Sbjct: 5   VFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYA-------RRLLVMGDLG--QVLF---- 51

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAK 203
             VE DL     I  AL  + VVI  +G   E + F       +  +  + L  AA  A 
Sbjct: 52  --VEFDLRDDESIRKALEGSDVVINLVGRLYETKNFSF---EDVHVEGPERLAKAAKEAG 106

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GME 258
           V   I +S+LG +    P+  L         K + EEA+  +    TIVRP    G E
Sbjct: 107 VERLIHISALGADANS-PSKYLRS-------KAEGEEAVREAFPEATIVRPSVVFGRE 156

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs

 Score = 70.4 bits (173), Expect = 6e-14
 Identities = 50/174 (28%), Positives = 69/174 (39%), Gaps = 27/174 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A V GATG VG   +RELLK  +  +  V ++ R +      K          K +Q V 
Sbjct: 3   ALVLGATGLVGKHLLRELLKSPYYSK--VTAIVRRKLTFPEAK---------EKLVQIVV 51

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
                  D E+  +   A  N  V  CC+G + K+        ++D      L   A  A
Sbjct: 52  -------DFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAA 104

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPY-TIVRPG 255
            V HF++VSSLG +            +  L  K + E  L   G    TI RPG
Sbjct: 105 GVQHFLLVSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTIFRPG 150

Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 58/230 (25%), Positives = 88/230 (38%), Gaps = 41/230 (17%)

Query: 36  FPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDN---LAFVAGATGKV 92
            PS++  +            +A+      S A  A   ++    +       V GATG +
Sbjct: 18  SPSNRLAASLG----GALVRRAAAASR-GSRATAAAAAQSFRSKEPKDVTVLVVGATGYI 72

Query: 93  GSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
           G   VREL++ G+ V A  R               K   E   K +      E+V  D+ 
Sbjct: 73  GKFVVRELVRRGYNVVAVAREKSGIRG--------KNGKEDTKKELP---GAEVVFGDVT 121

Query: 153 KRVQIEPALGNAS----VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI 208
               +   L +      VV+ C+ +    V D    ++ID+QATKN +DA       HF+
Sbjct: 122 DADSLRKVLFSEGDPVDVVVSCLASRTGGVKD---SWKIDYQATKNSLDAGREVGAKHFV 178

Query: 209 MVSSLGTNK--FGFPAAILNLFWGVLLWKRKAEEALIA--SGLPYTIVRP 254
           ++S++   K    F  A           K K E  L A  S   Y+IVRP
Sbjct: 179 LLSAICVQKPLLEFQRA-----------KLKFEAELQALDSDFTYSIVRP 217

Length = 390

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 69.5 bits (170), Expect = 4e-13
 Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 33/173 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG VG   VRELL  G  VRA VR+ + A  L                G++ V   
Sbjct: 5   VTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--------------AGGVEVVLG- 49

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
                DL     +         V+   G  +           +   A     +AA  A V
Sbjct: 50  -----DLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRA----VQVTAVVRAAEAAG-AGV 99

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
            H + +S LG +     A+   L       K   E AL +SG+PYT +R    
Sbjct: 100 KHGVSLSVLGAD----AASPSALAR----AKAAVEAALRSSGIPYTTLRRAAF 144

Length = 275

>gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional

 Score = 69.3 bits (170), Expect = 8e-13
 Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 34/174 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG +G + VR+ L  G++VR  VR++++A  L       K  G             
Sbjct: 5   VIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-------KEWGA------------ 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           ELV  DL     + P+    + +I    AS     D+    +ID+     L++AA  AK+
Sbjct: 46  ELVYGDLSLPETLPPSFKGVTAII---DASTSRPSDLYNAKQIDWDGKLALIEAAKAAKI 102

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPGG 256
             FI  S L   ++ +          + L K K+  E+ L  SG+PYTI R  G
Sbjct: 103 KRFIFFSILNAEQYPY----------IPLMKLKSDIEQKLKKSGIPYTIFRLAG 146

Length = 317

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 45/188 (23%), Positives = 61/188 (32%), Gaps = 35/188 (18%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS  V  LL  G  VR   R     + L+  V                   
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV------------------- 44

Query: 144 LELVECDLEKRVQIEPAL-GNASVVI---CCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
            E V  DL  R  ++    G    VI         +    D      ++   T NL++AA
Sbjct: 45  -EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA 103

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-------KRKAEEAL----IASGLP 248
             A V  F+  SS+       P   ++   G           K  AE+ L       GLP
Sbjct: 104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLP 163

Query: 249 YTIVRPGG 256
             I+RP  
Sbjct: 164 VVILRPFN 171

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 52/199 (26%), Positives = 70/199 (35%), Gaps = 44/199 (22%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG +GS  VR LL  G+RVRA VRS   A  L                      
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLL-------------------DGL 41

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YRIDFQATKNLVD 197
            +E+VE DL     +  A+     V             +        YR + + T+N++D
Sbjct: 42  PVEVVEGDLTDAASLAAAMKGCDRVFHLAA-----FTSLWAKDRKELYRTNVEGTRNVLD 96

Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLW---------KRKAEEAL---IA 244
           AA  A V   +  SS+     G P    ++                 K  AE  +    A
Sbjct: 97  AALEAGVRRVVHTSSIAA--LGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAA 154

Query: 245 SGLPYTIVRPGGMERPTDA 263
            GL   IV P  +  P D 
Sbjct: 155 EGLDVVIVNPSAVFGPGDE 173

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 60.0 bits (146), Expect = 6e-10
 Identities = 45/176 (25%), Positives = 62/176 (35%), Gaps = 42/176 (23%)

Query: 85  VAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           +AGATG +G   V  LL   GF V    R    + N            E    G++    
Sbjct: 4   IAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSN------------EFQPSGVK---- 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V  D      +  AL     VI  +G +            I  Q    L+DAA  A 
Sbjct: 48  --VVPVDYASHESLVAALKGVDAVISALGGAA-----------IGDQ--LKLIDAAIAAG 92

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE--EALIAS--GLPYTIVRPG 255
           V  FI       ++FG     +     + L+  K +    L A   GLP+T V  G
Sbjct: 93  VKRFI------PSEFGVDYDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTYVSTG 142

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 54.9 bits (132), Expect = 2e-08
 Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 43/175 (24%)

Query: 85  VAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GATG+ G   +R LL  G  +VRA VR+V++A               LA++G+     
Sbjct: 3   VTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKA-------------ATLADQGV----- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAAT 200
            E+ + D  +   ++ A   AS            +F ITGP+  +       KN+ DAA 
Sbjct: 45  -EVRQGDYNQPELLQKAFAGASK-----------LFIITGPHYDNTLEIKQGKNVADAAR 92

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
            A V H   + S G       A    L    L      E A+  +G+PYT +R G
Sbjct: 93  RAGVKH---IYSTGYAFAEESAI--PLAHVKLA----VEYAIRTTGIPYTFLRNG 138

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 54.2 bits (131), Expect = 6e-08
 Identities = 54/185 (29%), Positives = 68/185 (36%), Gaps = 32/185 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG VGS  VR LL+ G  VR  VR      NL        LD            
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLDV----------- 45

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E+VE DL     +  A+     +            D    Y  + + T+NL+ AA  A
Sbjct: 46  --EIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA 103

Query: 203 KVNHFIMVSS---LGTNKFGFPA-----AILNLFWGV-----LLWKRKAEEALIASGLPY 249
            V   +  SS   LG    G PA     + L+   G       L ++ A E     GLP 
Sbjct: 104 GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPV 163

Query: 250 TIVRP 254
            IV P
Sbjct: 164 VIVNP 168

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 53.5 bits (129), Expect = 7e-08
 Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 53/200 (26%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           FV G TG +G   V+ LL+ GF+V   VRS    E+L ++ ++++  G  A       + 
Sbjct: 2   FVTGGTGFLGRHLVKRLLENGFKVLVLVRS----ESLGEAHERIEEAGLEA-------DR 50

Query: 144 LELVECDLEKRV------QIEPALGNASVVICCIGASEKEVFDITGP----YRIDFQATK 193
           + ++E DL +              G    VI C        +D   P    +R +   T+
Sbjct: 51  VRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAA-----SYDFQAPNEDAWRTNIDGTE 105

Query: 194 NLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAE 239
           ++++ A    +  F  VS+         A +     G +                + KAE
Sbjct: 106 HVLELAARLDIQRFHYVST---------AYVAGNREGNIRETELNPGQNFKNPYEQSKAE 156

Query: 240 -EALI---ASGLPYTIVRPG 255
            E L+   A+ +P T+ RP 
Sbjct: 157 AEQLVRAAATQIPLTVYRPS 176

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 53.5 bits (129), Expect = 7e-08
 Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 32/171 (18%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG++GS+    LL+ G  VRA VRS +RA               LA +G       
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRSDERAA-------------ALAARGA------ 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           E+V  DL+    +  AL     V      +     D    Y    QA +    A   A V
Sbjct: 44  EVVVGDLDDPAVLAAALAGVDAVFFLAPPAPTA--DARPGYV---QAAEAFASALREAGV 98

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
              + +SS+G +    P+ ++   W         E+ L  +GLP   +RP 
Sbjct: 99  KRVVNLSSVGAD-PESPSGLIRGHW-------LMEQVLNWAGLPVVHLRPA 141

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 52.7 bits (127), Expect = 2e-07
 Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 24/141 (17%)

Query: 82  LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
           L  V GATG + S  V +LLK G++VR  VRS+ ++  L   +K    +           
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDR--------- 51

Query: 142 EMLELVECDL-EKRVQIEPALGNASVVICCIGASEKEVFDITGPYR----IDF--QATKN 194
             LE V  D        + AL     VI    AS    F  TGP      ID   + T N
Sbjct: 52  --LEFVIVDDLTAPNAWDEALKGVDYVIHV--AS---PFPFTGPDAEDDVIDPAVEGTLN 104

Query: 195 LVDAA-TIAKVNHFIMVSSLG 214
           +++AA     V   ++ SS+ 
Sbjct: 105 VLEAAKAAGSVKRVVLTSSVA 125

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 52.0 bits (125), Expect = 3e-07
 Identities = 44/173 (25%), Positives = 63/173 (36%), Gaps = 34/173 (19%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GATG VG R V  LL+ G +VRA VRS ++  +   S                  E +
Sbjct: 3   VTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWS------------------ERV 44

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIA 202
            +V  DLE    +  AL         + +  S  +  +       D +A +N   AA  A
Sbjct: 45  TVVRGDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEE------ADRRAARNFARAARAA 98

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
            V   I +  L                  L  + +  E L A G+P T +R  
Sbjct: 99  GVKRIIYLGGLIPKGEELSPH--------LRSRAEVGEILRAGGVPVTELRAA 143

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 50.4 bits (121), Expect = 6e-07
 Identities = 32/137 (23%), Positives = 45/137 (32%), Gaps = 30/137 (21%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V G TG +GS  VR LL+ G+ V    R  +                           
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------------- 41

Query: 143 MLELVECDLEKRVQIEPALGNAS---VVICCIGASEKEVF-DITGP---YRIDFQATKNL 195
            +   E DL     +E  L       V+     A++  V      P    R +   T  L
Sbjct: 42  -IRFHEGDLTDPDALERLLAEVQPDAVIHL---AAQSGVGASFEDPADFIRANVLGTLRL 97

Query: 196 VDAATIAKVNHFIMVSS 212
           ++AA  A V  F+  SS
Sbjct: 98  LEAARRAGVKRFVFASS 114

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 47/203 (23%), Positives = 68/203 (33%), Gaps = 58/203 (28%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G T  +G   V ELL  G  V                         + N+G    ++ 
Sbjct: 5   IIGGTRFIGKALVEELLAAGHDV------------------------TVFNRGRTKPDLP 40

Query: 145 ELVE---CDLEKRVQIEPALGNAS--VVICCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
           E VE    D   R  +E  LG     VV+  I  + ++V            A K      
Sbjct: 41  EGVEHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQV-------ERALDAFKG----- 88

Query: 200 TIAKVNHFIMVSSLG-----------TNKFGFPAAILNLFWGVL-LWKRKAEEALI-ASG 246
              +V  +I +SS             +     P A+           KR AE+ LI A+ 
Sbjct: 89  ---RVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAA 145

Query: 247 LPYTIVRPGGMERPTD-AYKETH 268
            PYTIVRP  +  P D   +  +
Sbjct: 146 FPYTIVRPPYIYGPGDYTGRLAY 168

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 47.3 bits (113), Expect = 7e-06
 Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 24/148 (16%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V G  G +G   VR LL+ G  ++  VR      +        +L  + +   +      
Sbjct: 2   VTGGGGFLGRHIVRLLLREG-ELQE-VRVFDLRFS-------PELLEDFSKLQVITY--- 49

Query: 145 ELVECDLEKRVQIEPALGNASVVI--CCIGASEKEV-FDITGPYRIDFQATKNLVDAATI 201
             +E D+  +  +  AL  + VVI    I     +   D     +++ + T+N++DA   
Sbjct: 50  --IEGDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTI--MKVNVKGTQNVLDACVK 105

Query: 202 AKVNHFIMVSS---LGTNKFGFPAAILN 226
           A V   +  SS   +G N +G P  I+N
Sbjct: 106 AGVRVLVYTSSMEVVGPNSYGQP--IVN 131

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 46.8 bits (111), Expect = 2e-05
 Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 4/82 (4%)

Query: 316 PLTPMEELLAKIPSQRAEPKESIA--PEKSDPAASKSMISEESSAPITEEPVQTKAKVTD 373
           PL+P        P     P   +      S     K   S   +A   E+          
Sbjct: 496 PLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQ--HHAQPKPR 553

Query: 374 PLSPYTSYEDLKPPTSPTPTAP 395
           PLSPYT YEDLKPPTSPTP+  
Sbjct: 554 PLSPYTMYEDLKPPTSPTPSPV 575

Length = 576

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 43.7 bits (104), Expect = 1e-04
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 31/142 (21%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ---MKLDGELANKGIQPV 141
           V GA+G +GS  V+ LL+ G+ VRA VR      +     K    ++L+G  A       
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVR------DPGDEKKVAHLLELEG--AK------ 48

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICC-------IGASEKEVFDITGPYRIDFQATKN 194
           E L+L + DL      + A+     V              E+E+ +         + T N
Sbjct: 49  ERLKLFKADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPA------VKGTLN 102

Query: 195 LVDAATIAK-VNHFIMVSSLGT 215
           +++A   AK V   +  SS+  
Sbjct: 103 VLEACAKAKSVKRVVFTSSVAA 124

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 41.8 bits (98), Expect = 5e-04
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GA+G V S  V +LL+ G++VRA VR   +       VK++    +L  K  +   
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSK-------VKKVNHLLDLDAKPGR--- 50

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            LEL   DL      +  +   + V            D     +     T N + AA  A
Sbjct: 51  -LELAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAA 109

Query: 203 K-VNHFIMVSSLGT 215
           K V  F++ SS G+
Sbjct: 110 KSVKRFVLTSSAGS 123

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 42.0 bits (99), Expect = 5e-04
 Identities = 45/186 (24%), Positives = 66/186 (35%), Gaps = 43/186 (23%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GA G +G   V +LL  G  VR  VR+ + AE                      V + 
Sbjct: 4   VTGANGFIGRALVDKLLSRGEEVRIAVRNAENAE--------------------PSVVLA 43

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YR-IDFQATKNLVDA 198
           EL + D                V+    A+   V +  G      YR ++ + T+ L  A
Sbjct: 44  ELPDIDSFTD-----LFLGVDAVVHL--AARVHVMNDQGADPLSDYRKVNTELTRRLARA 96

Query: 199 ATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL------LWKRKAEEALIA----SGLP 248
           A    V  F+ +SS+  N  G   A  +              K +AE AL+      G+ 
Sbjct: 97  AARQGVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGME 156

Query: 249 YTIVRP 254
             I+RP
Sbjct: 157 VVILRP 162

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 41.6 bits (98), Expect = 6e-04
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
           FV GATG +GS  VREL+  G  V    RS   A  L
Sbjct: 4   FVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKL 40

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 190 QATKNLVDAATIAKVNHFIMVSSLGTN---KFGFPAAILNLFWGVLLWKRKAEEALIASG 246
           Q  +N+V A     V   I  +SLG        F           L   RK+   +  S 
Sbjct: 80  QQAENVVQAMKAVGVKRLIWTTSLGIYDEVPGKFGEWNKEFIGNYLAPYRKSAAVIENSD 139

Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSL 301
           L YT++RP  +        +  +  L+ +   F G +VS   VA+L+  +  +   
Sbjct: 140 LDYTLLRPAWLT-----NNDEIDYELTPKGEAFKGTEVSRKSVADLITDIINHPDY 190

These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 40.9 bits (96), Expect = 0.001
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V G +G  G R V++LL+   R    VRS   A    +++                  
Sbjct: 2   VLVTGGSGFFGERLVKQLLE---RGGTYVRSFDIAP-PGEALSA------------WQHP 45

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDA 198
            +E ++ D+  R  +E AL  A  V         A  ++++       ++   T+N++DA
Sbjct: 46  NIEFLKGDITDRNDVEQALSGADCVFHTAAIVPLAGPRDLYWE-----VNVGGTQNVLDA 100

Query: 199 ATIAKVNHFIMVSSLGT 215
                V  F+  SS   
Sbjct: 101 CQRCGVQKFVYTSSSSV 117

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	530
PLN03209	576	translocon at the inner envelope of chloroplast su	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.97
CHL00194	317	ycf39 Ycf39; Provisional	99.97
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.97
PLN02427	386	UDP-apiose/xylose synthase	99.97
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.97
PLN02214	342	cinnamoyl-CoA reductase	99.97
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.97
PLN02650	351	dihydroflavonol-4-reductase	99.96
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.96
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.96
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.96
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.96
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.96
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.96
PLN02583	297	cinnamoyl-CoA reductase	99.96
PLN02572	442	UDP-sulfoquinovose synthase	99.96
PLN00198	338	anthocyanidin reductase; Provisional	99.96
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.96
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.96
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.95
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.95
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.95
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.95
PLN02240	352	UDP-glucose 4-epimerase	99.95
PLN02206	442	UDP-glucuronate decarboxylase	99.95
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.95
PLN02686	367	cinnamoyl-CoA reductase	99.95
PLN02260	668	probable rhamnose biosynthetic enzyme	99.95
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.95
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.95
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.95
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.95
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.95
PLN02653	340	GDP-mannose 4,6-dehydratase	99.95
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.95
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.95
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.95
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.94
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.94
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.94
PRK07201	657	short chain dehydrogenase; Provisional	99.94
PLN00016	378	RNA-binding protein; Provisional	99.94
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.94
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.93
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PLN02996	491	fatty acyl-CoA reductase	99.93
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.93
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.93
PRK05865	854	hypothetical protein; Provisional	99.92
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.92
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.92
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.91
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.91
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.91
PLN02778	298	3,5-epimerase/4-reductase	99.91
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.9
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.9
PRK07806	248	short chain dehydrogenase; Provisional	99.9
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.9
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK12320	699	hypothetical protein; Provisional	99.89
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK09135	249	pteridine reductase; Provisional	99.89
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.89
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.89
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.88
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK06180	277	short chain dehydrogenase; Provisional	99.88
PRK07067	257	sorbitol dehydrogenase; Provisional	99.88
PRK12746	254	short chain dehydrogenase; Provisional	99.88
PRK08263	275	short chain dehydrogenase; Provisional	99.88
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.88
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.88
PRK07774	250	short chain dehydrogenase; Provisional	99.88
PRK06182	273	short chain dehydrogenase; Validated	99.87
PRK07074	257	short chain dehydrogenase; Provisional	99.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.87
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.87
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.87
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PLN02503	605	fatty acyl-CoA reductase 2	99.87
PRK06914	280	short chain dehydrogenase; Provisional	99.87
PRK07775	274	short chain dehydrogenase; Provisional	99.87
PRK09186	256	flagellin modification protein A; Provisional	99.87
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PRK12939	250	short chain dehydrogenase; Provisional	99.87
PRK06128	300	oxidoreductase; Provisional	99.87
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.86
PRK12827	249	short chain dehydrogenase; Provisional	99.86
PRK12829	264	short chain dehydrogenase; Provisional	99.86
PLN02253	280	xanthoxin dehydrogenase	99.86
PRK07890	258	short chain dehydrogenase; Provisional	99.86
PRK06179	270	short chain dehydrogenase; Provisional	99.86
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.86
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07478	254	short chain dehydrogenase; Provisional	99.86
PRK05876	275	short chain dehydrogenase; Provisional	99.86
PRK05717	255	oxidoreductase; Validated	99.86
PRK06138	252	short chain dehydrogenase; Provisional	99.86
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07326	237	short chain dehydrogenase; Provisional	99.85
PRK08265	261	short chain dehydrogenase; Provisional	99.85
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK07060	245	short chain dehydrogenase; Provisional	99.85
PRK09134	258	short chain dehydrogenase; Provisional	99.85
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.85
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.85
PRK07454	241	short chain dehydrogenase; Provisional	99.85
PRK07063	260	short chain dehydrogenase; Provisional	99.85
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.85
PRK07814	263	short chain dehydrogenase; Provisional	99.85
PRK12747	252	short chain dehydrogenase; Provisional	99.85
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.85
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK10538	248	malonic semialdehyde reductase; Provisional	99.85
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.85
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.85
PRK08219	227	short chain dehydrogenase; Provisional	99.85
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08339	263	short chain dehydrogenase; Provisional	99.84
PLN02260	668	probable rhamnose biosynthetic enzyme	99.84
PRK05867	253	short chain dehydrogenase; Provisional	99.84
PRK07024	257	short chain dehydrogenase; Provisional	99.84
PRK07825	273	short chain dehydrogenase; Provisional	99.84
PRK07109	334	short chain dehydrogenase; Provisional	99.84
PRK06181	263	short chain dehydrogenase; Provisional	99.84
PRK06114	254	short chain dehydrogenase; Provisional	99.84
PRK06194	287	hypothetical protein; Provisional	99.84
PRK06523	260	short chain dehydrogenase; Provisional	99.84
PRK07985	294	oxidoreductase; Provisional	99.84
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.84
PRK07035	252	short chain dehydrogenase; Provisional	99.84
PRK06196	315	oxidoreductase; Provisional	99.84
PRK12937	245	short chain dehydrogenase; Provisional	99.84
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.84
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.84
PRK06123	248	short chain dehydrogenase; Provisional	99.84
PRK08628	258	short chain dehydrogenase; Provisional	99.84
PRK12743	256	oxidoreductase; Provisional	99.84
PRK06841	255	short chain dehydrogenase; Provisional	99.84
PRK06500	249	short chain dehydrogenase; Provisional	99.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.84
PRK05866	293	short chain dehydrogenase; Provisional	99.84
PRK08589	272	short chain dehydrogenase; Validated	99.84
PRK07904	253	short chain dehydrogenase; Provisional	99.84
PRK06172	253	short chain dehydrogenase; Provisional	99.83
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.83
PRK12744	257	short chain dehydrogenase; Provisional	99.83
PRK08643	256	acetoin reductase; Validated	99.83
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.83
PRK05650	270	short chain dehydrogenase; Provisional	99.83
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.83
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.83
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK09291	257	short chain dehydrogenase; Provisional	99.83
PRK06139	330	short chain dehydrogenase; Provisional	99.83
PRK06701	290	short chain dehydrogenase; Provisional	99.83
PRK06398	258	aldose dehydrogenase; Validated	99.83
PRK09242	257	tropinone reductase; Provisional	99.83
PRK07856	252	short chain dehydrogenase; Provisional	99.83
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.83
PRK07041	230	short chain dehydrogenase; Provisional	99.82
PRK06949	258	short chain dehydrogenase; Provisional	99.82
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.82
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.82
PRK12742	237	oxidoreductase; Provisional	99.82
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK08267	260	short chain dehydrogenase; Provisional	99.82
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.82
PRK08251	248	short chain dehydrogenase; Provisional	99.82
PRK07576	264	short chain dehydrogenase; Provisional	99.82
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK05693	274	short chain dehydrogenase; Provisional	99.82
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.82
PRK07102	243	short chain dehydrogenase; Provisional	99.82
PRK07062	265	short chain dehydrogenase; Provisional	99.81
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.81
PRK05872	296	short chain dehydrogenase; Provisional	99.81
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.81
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.81
PRK07677	252	short chain dehydrogenase; Provisional	99.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.81
PRK06101	240	short chain dehydrogenase; Provisional	99.81
PRK08264	238	short chain dehydrogenase; Validated	99.81
PRK06198	260	short chain dehydrogenase; Provisional	99.81
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK08017	256	oxidoreductase; Provisional	99.81
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
PRK07069	251	short chain dehydrogenase; Validated	99.81
PRK07577	234	short chain dehydrogenase; Provisional	99.81
PRK06197	306	short chain dehydrogenase; Provisional	99.81
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
PRK07831	262	short chain dehydrogenase; Provisional	99.8
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.8
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK06940	275	short chain dehydrogenase; Provisional	99.8
PRK08324	681	short chain dehydrogenase; Validated	99.8
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.8
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.8
PRK06483	236	dihydromonapterin reductase; Provisional	99.8
PRK06057	255	short chain dehydrogenase; Provisional	99.8
PRK09072	263	short chain dehydrogenase; Provisional	99.8
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.8
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.8
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.8
PRK08226	263	short chain dehydrogenase; Provisional	99.79
PRK06484	520	short chain dehydrogenase; Validated	99.79
PRK08703	239	short chain dehydrogenase; Provisional	99.79
PRK07832	272	short chain dehydrogenase; Provisional	99.79
PRK06125	259	short chain dehydrogenase; Provisional	99.79
PRK08278	273	short chain dehydrogenase; Provisional	99.79
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.79
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.79
PRK06924	251	short chain dehydrogenase; Provisional	99.79
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.79
PRK05884	223	short chain dehydrogenase; Provisional	99.78
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.78
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.78
PRK07791	286	short chain dehydrogenase; Provisional	99.78
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.78
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.78
PRK05855	582	short chain dehydrogenase; Validated	99.77
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.77
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.77
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.77
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.77
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.76
PRK07023	243	short chain dehydrogenase; Provisional	99.76
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.76
PRK07201	657	short chain dehydrogenase; Provisional	99.76
PRK05854	313	short chain dehydrogenase; Provisional	99.76
PRK05599	246	hypothetical protein; Provisional	99.76
PLN02780	320	ketoreductase/ oxidoreductase	99.75
PLN03209	576	translocon at the inner envelope of chloroplast su	99.75
PRK06953	222	short chain dehydrogenase; Provisional	99.74
PRK08303	305	short chain dehydrogenase; Provisional	99.74
PRK12367	245	short chain dehydrogenase; Provisional	99.74
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.74
PRK06484	520	short chain dehydrogenase; Validated	99.74
PRK07578	199	short chain dehydrogenase; Provisional	99.73
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.73
COG2910	211	Putative NADH-flavin reductase [General function p	99.72
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
KOG0725	270	consensus Reductases with broad range of substrate	99.71
PRK08177	225	short chain dehydrogenase; Provisional	99.71
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.7
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.69
PRK08862	227	short chain dehydrogenase; Provisional	99.69
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.69
PLN00015	308	protochlorophyllide reductase	99.68
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.67
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.67
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.67
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.66
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.65
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.64
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.62
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.6
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.6
KOG1208	314	consensus Dehydrogenases with different specificit	99.59
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.57
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.56
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.54
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.54
COG1028	251	FabG Dehydrogenases with different specificities (	99.52
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.52
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.48
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.45
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.45
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.41
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.38
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.35
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.28
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.26
PRK08309	177	short chain dehydrogenase; Provisional	99.24
PRK06720	169	hypothetical protein; Provisional	99.21
KOG2774	366	consensus NAD dependent epimerase [General functio	99.17
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.12
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.08
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.96
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.94
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.89
PTZ00325	321	malate dehydrogenase; Provisional	98.88
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.83
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.7
PLN00106	323	malate dehydrogenase	98.7
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.65
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.63
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.51
PRK05086	312	malate dehydrogenase; Provisional	98.5
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.5
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.41
PRK09620	229	hypothetical protein; Provisional	98.37
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.34
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.27
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.25
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.21
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.17
COG3268	382	Uncharacterized conserved protein [Function unknow	98.11
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.08
PRK14982	340	acyl-ACP reductase; Provisional	98.06
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.06
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.06
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.06
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.95
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.93
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.91
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.91
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.91
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.82
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.81
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.81
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.8
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.79
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.78
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.77
PTZ00117	319	malate dehydrogenase; Provisional	97.76
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.76
PRK09496	453	trkA potassium transporter peripheral membrane com	97.76
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.75
PRK05442	326	malate dehydrogenase; Provisional	97.74
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.71
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.7
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.68
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.68
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.66
PRK06223	307	malate dehydrogenase; Reviewed	97.64
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.61
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.6
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.59
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.59
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.58
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.57
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.56
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.53
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.53
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.51
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.51
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.5
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.48
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.48
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.46
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.46
PRK09496	453	trkA potassium transporter peripheral membrane com	97.45
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.45
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.44
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.44
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.43
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.43
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.42
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.42
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.39
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.38
PRK04148	134	hypothetical protein; Provisional	97.37
PLN02602	350	lactate dehydrogenase	97.36
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.36
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.35
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.35
PRK08328	231	hypothetical protein; Provisional	97.34
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.32
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.3
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.29
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.28
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.28
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.22
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.22
PRK08223	287	hypothetical protein; Validated	97.21
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.17
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	97.17
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.16
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.15
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.15
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.11
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.06
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.06
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.05
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	97.05
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.03
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.02
PLN02383	344	aspartate semialdehyde dehydrogenase	97.01
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	97.0
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.0
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.99
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.97
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	96.95
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.95
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.95
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.94
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.94
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.93
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.91
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.91
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.91
PRK07877	722	hypothetical protein; Provisional	96.89
COG4982	866	3-oxoacyl-[acyl-carrier protein]	96.88
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.87
PRK10669	558	putative cation:proton antiport protein; Provision	96.86
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	96.86
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.85
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.85
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.84
PRK08655	437	prephenate dehydrogenase; Provisional	96.84
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.84
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.83
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.83
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.82
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.81
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.8
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.79
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.79
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.78
PRK07411	390	hypothetical protein; Validated	96.78
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.77
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.77
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.73
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.73
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.73
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.71
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.71
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.71
PRK14852	989	hypothetical protein; Provisional	96.69
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.67
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.67
PRK14851	679	hypothetical protein; Provisional	96.67
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.64
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.62
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.62
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	96.62
PRK06153	393	hypothetical protein; Provisional	96.6
PRK06849	389	hypothetical protein; Provisional	96.6
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.6
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.58
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.57
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.57
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.57
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.56
PLN00203	519	glutamyl-tRNA reductase	96.55
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.53
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.53
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.51
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.51
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.49
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.47
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.45
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.45
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.43
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.42
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.41
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	96.4
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.4
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.39
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.35
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.34
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.32
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.31
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.31
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	96.29
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.28
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.24
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.23
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.22
cd01490	435	Ube1_repeat2 Ubiquitin activating enzyme (E1), rep	96.2
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.18
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	96.18
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.16
PRK07574	385	formate dehydrogenase; Provisional	96.15
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.12
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	96.12
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.11
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.1
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.09
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.08
PF10100	429	DUF2338: Uncharacterized protein conserved in bact	96.07
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.07
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.07
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.07
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.06
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.05
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.05

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=100.00  E-value=8.7e-88  Score=727.51  Aligned_cols=521  Identities=67%  Similarity=0.978  Sum_probs=444.9

Q ss_pred             CCccccccccccccCCCCccccceeccccccceeecCCCCCCCCCCCCccccccccccCCcccccccCCCCCCCCCCCCC
Q 009648            1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDD   80 (530)
Q Consensus         1 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~r~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~   80 (530)
                      ||+++||++.++++|++++||||+.++|.++|++||.+|++|+|.|++|.++++.+++|..+....+....+....++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (576)
T PLN03209          1 MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDE   80 (576)
T ss_pred             CCcccccccccccccccccccccccCcccccceeeccccccCcccccccccchhhccccchhhhhhhhhccccccccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999888878888877788889


Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++||||||+|+||++|+++|+++|++|++++|+.++...+.+.+.+++++..    |.....+++++.+|+.|.+++.++
T Consensus        81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~----Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVE----GTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccc----cccccCceEEEEecCCCHHHHHHH
Confidence            9999999999999999999999999999999999888777665544332211    212235689999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      |+++|+||||+|.......++...+++|+.|+.+|+++|+++|++|||++||.++...+......+..++|..+|..+|+
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~  236 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE  236 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence            99999999999976444345667789999999999999999999999999999875333332234456789999999999


Q ss_pred             HHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHH
Q 009648          241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM  320 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i  320 (530)
                      +++..||+|++||||+++++.+.+..+..+.+...+...++.+.++|||+++++++.++....+++|.|+++......+|
T Consensus       237 ~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~  316 (576)
T PLN03209        237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPM  316 (576)
T ss_pred             HHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCH
Confidence            99999999999999999988665433334444334445567899999999999999987656799999999998889999


Q ss_pred             HHHHHhcCCCCCCCCccCCCCCCCCCCCCCCCcCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 009648          321 EELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD  400 (530)
Q Consensus       321 ~ell~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rPlsp~~~~~~~kpp~sp~p~~~~~~~~  400 (530)
                      .+++..+-.....+++.+...++++.++..|+.+.++....+++.+.+++.+||||||+.||||||||||+|++|++++.
T Consensus       317 ~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (576)
T PLN03209        317 EELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPA  396 (576)
T ss_pred             HHHHHhcccccCCCCcccccccCCCCCCcccCCCCCCCcccccCCCCcCCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Confidence            99999999888888999999999999999999999998888888899999999999999999999999999999998877


Q ss_pred             -CccccCCCCCCCCCCCCCCCCCCCCcccCCCCCccccCCCCCCcCccCCCCCCCCCCCCCCCCCCcc------------
Q 009648          401 -STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLKPPSSPSPTPSGPKEV------------  467 (530)
Q Consensus       401 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~plspy~~y~~lk~~~~~~~~~~~~~~~------------  467 (530)
                       .+.+|++.++.++++.++. ...++|.+....+.++++.||||||++|+||||||||+|++++....            
T Consensus       397 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (576)
T PLN03209        397 SSKSVDAVAKPAEPDVVPSP-GSASNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVP  475 (576)
T ss_pred             CCCcccccccCccCCCCCCC-CccccCccccccccccCCCCCCCcccccccCCCCCCCCCCCCCCcccccccccccCCCC
Confidence             7888999999999988854 66778888888888999999999999999999999999999544421            


Q ss_pred             ----------------------------------CCCC--C------CCccccccCCCCCCccccCCCCcccCCCCCCCC
Q 009648          468 ----------------------------------LSSS--S------TTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSI  505 (530)
Q Consensus       468 ----------------------------------~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  505 (530)
                                                        +|++  +      .+...+...++||++++++.+++||.|||   +
T Consensus       476 ~~~~~~a~~d~~~~~~~~~~plspy~~y~d~kpp~sp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  552 (576)
T PLN03209        476 DTAPATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQHHAQPK---P  552 (576)
T ss_pred             CCCCcccccccccCCCCCCCCCCcchhhcccCCCCCCCccccCCccCcccccccccccccCCcccccccccccCCC---C
Confidence                                              0000  0      00111224678889988889999999998   9


Q ss_pred             CCCCCCccCCCCCCCCCCCCCCCC
Q 009648          506 HHHSPYHMYEDLKPPTSPIPSPKK  529 (530)
Q Consensus       506 ~~~~~~~~~~~~~~~~~~~~~~~~  529 (530)
                      ||||||+|||||||||||+||.++
T Consensus       553 ~~~~~~~~~~~~~~~~~~~~~~~~  576 (576)
T PLN03209        553 RPLSPYTMYEDLKPPTSPTPSPVL  576 (576)
T ss_pred             CCCCccchhhccCCCCCCCCCCCC
Confidence            999999999999999999999874

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.97  E-value=1.5e-30  Score=271.63  Aligned_cols=245  Identities=15%  Similarity=0.029  Sum_probs=183.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+|||||||||||++|+++|+++|++|++++|...........+...        .+.....+++++.+|+.|.+.+
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~Di~d~~~l   84 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTS--------VSEEQWSRFIFIQGDIRKFTDC   84 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhc--------cccccCCceEEEEccCCCHHHH
Confidence            44579999999999999999999999999999998654322211111000        0111124688999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      ..+++++|+|||+|+....  ...+....+++|+.|+.+|+++|++.++++|||+||.+++...     .++....+.+.
T Consensus        85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~  164 (348)
T PRK15181         85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSP  164 (348)
T ss_pred             HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCCh
Confidence            9999999999999985432  2234456789999999999999999999999999998764321     12223456778


Q ss_pred             HHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|.++|.+++    +.|++++++||+.||||++....               ...+.+..++....+++|++|+|++
T Consensus       165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a  244 (348)
T PRK15181        165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA  244 (348)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            9999999998876    36899999999999999753210               1112222223333468999999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      ++.++.... ...+++|||+++...++.++.+.+.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~  284 (348)
T PRK15181        245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL  284 (348)
T ss_pred             HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence            998876432 135789999999999999999999998874

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.97  E-value=8.8e-30  Score=262.39  Aligned_cols=220  Identities=25%  Similarity=0.338  Sum_probs=177.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||||||||++|+++|+++||+|++++|+.++...+.                   ..+++++.+|+.|.+++.++
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-------------------~~~v~~v~~Dl~d~~~l~~a   61 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-------------------EWGAELVYGDLSLPETLPPS   61 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-------------------hcCCEEEECCCCCHHHHHHH
Confidence            47999999999999999999999999999999976543321                   14689999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      ++++|+|||+++...   .+....+++|+.++.+++++|+++|++|||++||.+...++        ...|..+|.++|+
T Consensus        62 l~g~d~Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~--------~~~~~~~K~~~e~  130 (317)
T CHL00194         62 FKGVTAIIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP--------YIPLMKLKSDIEQ  130 (317)
T ss_pred             HCCCCEEEECCCCCC---CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC--------CChHHHHHHHHHH
Confidence            999999999986432   23345678999999999999999999999999997653332        2358899999999


Q ss_pred             HHHHCCCCEEEEEcCcccCCCcc-cc----cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          241 ALIASGLPYTIVRPGGMERPTDA-YK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~Gp~~~-~~----~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      ++++.|++|+|+||+++|+.... +.    ....+.+. ++....++||++|+|++++.+++++. ..+++||+++++..
T Consensus       131 ~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~ni~g~~~~  208 (317)
T CHL00194        131 KLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPE-TKNKTFPLVGPKSW  208 (317)
T ss_pred             HHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHhcCcc-ccCcEEEecCCCcc
Confidence            99999999999999998864211 10    01111221 22223367999999999999998765 46899999999999


Q ss_pred             ChhHHHHHHHhcCCCCC
Q 009648          316 PLTPMEELLAKIPSQRA  332 (530)
Q Consensus       316 t~~~i~ell~~v~g~~~  332 (530)
                      ++.++.+++.+++|+..
T Consensus       209 s~~el~~~~~~~~g~~~  225 (317)
T CHL00194        209 NSSEIISLCEQLSGQKA  225 (317)
T ss_pred             CHHHHHHHHHHHhCCCC
Confidence            99999999999998753

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.97  E-value=5.6e-30  Score=259.96  Aligned_cols=235  Identities=21%  Similarity=0.182  Sum_probs=177.5

Q ss_pred             EEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           84 FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        84 LVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      |||||+||||++||++|+++|  ++|++++|........  .+              ...+..+++.+|++|.+++.+++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~--------------~~~~~~~~~~~Di~d~~~l~~a~   64 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DL--------------QKSGVKEYIQGDITDPESLEEAL   64 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hh--------------hcccceeEEEeccccHHHHHHHh
Confidence            699999999999999999999  8999999877532210  01              11234459999999999999999


Q ss_pred             CCCcEEEEcccCCCCcc-CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC---C------Ccccc--ccchh
Q 009648          162 GNASVVICCIGASEKEV-FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---G------FPAAI--LNLFW  229 (530)
Q Consensus       162 ~~vD~VI~~Ag~~~~~~-~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~---~------~~~~~--~~~~~  229 (530)
                      +++|+|||+|+...... .....++++|+.||+||+++|++++++||||+||.++...   +      ++..+  .....
T Consensus        65 ~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~  144 (280)
T PF01073_consen   65 EGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLD  144 (280)
T ss_pred             cCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccC
Confidence            99999999998654433 3456689999999999999999999999999999876433   1      11111  22455


Q ss_pred             HHHHHHHHHHHHHHH-CC--------CCEEEEEcCcccCCCcccccccc---------eeecccCcccCCCCCHHHHHHH
Q 009648          230 GVLLWKRKAEEALIA-SG--------LPYTIVRPGGMERPTDAYKETHN---------ITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~-~g--------l~~tIvRPg~V~Gp~~~~~~~~~---------~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      .|+.+|+.+|+++.+ .+        ++.++|||..||||++.......         ......+....++++++|+|++
T Consensus       145 ~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a  224 (280)
T PF01073_consen  145 PYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA  224 (280)
T ss_pred             chHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence            799999999999875 22        88999999999999875422111         1111222333468999999999


Q ss_pred             HHHHHh---CC---CCCCCcEEEEeCCCCCC-hhHHHHHHHhcCCCCCCC
Q 009648          292 LACMAK---NR---SLSYCKVVEVIAETTAP-LTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       292 i~~ll~---~~---~~~~g~vynv~~~~~~t-~~~i~ell~~v~g~~~~~  334 (530)
                      ++.+++   ++   ....|+.|+|++++... +.++...+.+.+|.....
T Consensus       225 hvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  225 HVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence            988754   22   33579999999999887 777777777777766544

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=99.97  E-value=1.5e-29  Score=267.41  Aligned_cols=239  Identities=15%  Similarity=0.132  Sum_probs=178.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCC-CCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGI-QPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~-~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.|+|||||||||||++|++.|+++ |++|++++|+..+...+...             +. ....+++++.+|+.|.+
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-------------~~~~~~~~~~~~~~Dl~d~~   78 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-------------DTVPWSGRIQFHRINIKHDS   78 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-------------ccccCCCCeEEEEcCCCChH
Confidence            34578999999999999999999998 59999999987654433210             10 11257999999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccc---
Q 009648          156 QIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL---  225 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~---  225 (530)
                      .+.++++++|+|||||+.....  ..+....+..|+.++.+|+++|++.+ ++|||+||..++...     .++.+.   
T Consensus        79 ~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~  157 (386)
T PLN02427         79 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQD  157 (386)
T ss_pred             HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence            9999999999999999854321  12233456789999999999999887 799999998763321     111110   


Q ss_pred             -------------------cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-----------------
Q 009648          226 -------------------NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------------  265 (530)
Q Consensus       226 -------------------~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-----------------  265 (530)
                                         ++.+.|+.+|+++|++++.    .|++++++||++||||+....                 
T Consensus       158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~  237 (386)
T PLN02427        158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF  237 (386)
T ss_pred             cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHH
Confidence                               1235799999999999874    689999999999999975321                 


Q ss_pred             -----cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC-CCCChhHHHHHHHhcCCC
Q 009648          266 -----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       266 -----~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~-~~~t~~~i~ell~~v~g~  330 (530)
                           ....+.+..++....++||++|+|++++.+++++....+++||++++ ...++.++.+++.++++.
T Consensus       238 ~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        238 SNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence                 00111111222223368999999999999998763235789999997 588999999999999985

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.97  E-value=1.3e-29  Score=251.48  Aligned_cols=231  Identities=18%  Similarity=0.142  Sum_probs=184.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||+|.|.+|++.|++|++++.-.....+....                  ..+.|+++|+.|.+.+.+.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~------------------~~~~f~~gDi~D~~~L~~v   62 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK------------------LQFKFYEGDLLDRALLTAV   62 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh------------------ccCceEEeccccHHHHHHH
Confidence            5799999999999999999999999999999865433332210                  1168999999999999999


Q ss_pred             hC--CCcEEEEcccC--CCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-------ccccccchh
Q 009648          161 LG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-------PAAILNLFW  229 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~--~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-------~~~~~~~~~  229 (530)
                      |+  .+|+|||+||.  ...+..++..+++.|+.||.+|+++|+++|+++|||-||..+  ||.       ++.+..+.+
T Consensus        63 f~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAav--YG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          63 FEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAV--YGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             HHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhh--cCCCCCcccCCCCCCCCCC
Confidence            95  68999999994  456777888999999999999999999999999999999887  443       334577888


Q ss_pred             HHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcc--c-----ccccc--------------eeecc------cCcc
Q 009648          230 GVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA--Y-----KETHN--------------ITLSQ------EDTL  278 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~--~-----~~~~~--------------~~~~~------~~~~  278 (530)
                      +||++|.+.|++|++    .++++++||..++.|....  .     ..++.              +.+.+      +++.
T Consensus       141 PYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~  220 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTC  220 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCe
Confidence            999999999999985    7899999999999875321  1     11222              12222      2344


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ..++||+.|+|++.+.+|+.-.. -...+||++.+...+..++.+.++++.|+.
T Consensus       221 iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~  274 (329)
T COG1087         221 IRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD  274 (329)
T ss_pred             eeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc
Confidence            45789999999999888763221 124799999999999999999999999954

>PLN02214 cinnamoyl-CoA reductase

Probab=99.97  E-value=1.6e-28  Score=255.83  Aligned_cols=235  Identities=20%  Similarity=0.167  Sum_probs=177.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+||||++|+++|+++|++|++++|+.++....  .+..+  .      +  ...+++++.+|+.|.+.+
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~--~------~--~~~~~~~~~~Dl~d~~~~   75 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT--HLREL--E------G--GKERLILCKADLQDYEAL   75 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH--HHHHh--h------C--CCCcEEEEecCcCChHHH
Confidence            4567899999999999999999999999999999987543211  01111  0      0  114688999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC-ccCCC--------Cccc-----
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG-TNKFG--------FPAA-----  223 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~-v~~~~--------~~~~-----  223 (530)
                      .++++++|+|||||+...   .++...+++|+.++.+|+++|++++++||||+||.+ ++...        .++.     
T Consensus        76 ~~~~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~  152 (342)
T PLN02214         76 KAAIDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLD  152 (342)
T ss_pred             HHHHhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChh
Confidence            999999999999998642   345667899999999999999999999999999964 42111        1111     


Q ss_pred             -cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccc------eeeccc---CcccCCCCCHHHHH
Q 009648          224 -ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN------ITLSQE---DTLFGGQVSNLQVA  289 (530)
Q Consensus       224 -~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~------~~~~~~---~~~~~g~V~v~DVA  289 (530)
                       ..++...|+.+|..+|++++.    .|++++++||++||||+........      +..+..   .....++||++|+|
T Consensus       153 ~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva  232 (342)
T PLN02214        153 FCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVA  232 (342)
T ss_pred             hccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHH
Confidence             223556899999999999864    5999999999999999754211000      001110   11223689999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      ++++.+++++.  .++.||+++. ..++.++.+++.++++.
T Consensus       233 ~a~~~al~~~~--~~g~yn~~~~-~~~~~el~~~i~~~~~~  270 (342)
T PLN02214        233 LAHVLVYEAPS--ASGRYLLAES-ARHRGEVVEILAKLFPE  270 (342)
T ss_pred             HHHHHHHhCcc--cCCcEEEecC-CCCHHHHHHHHHHHCCC
Confidence            99999998865  3568999874 67999999999999864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.97  E-value=1.3e-28  Score=252.63  Aligned_cols=238  Identities=17%  Similarity=0.150  Sum_probs=175.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+||||++|+++|+++|++|++++|+......... +...  .        ....+++++.+|+.|.+.+.
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~--~--------~~~~~~~~~~~Dl~~~~~~~   71 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLAL--D--------GAKERLHLFKANLLEEGSFD   71 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhc--c--------CCCCceEEEeccccCcchHH
Confidence            35789999999999999999999999999999998754332211 1100  0        01257899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCC-cchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC-C---------cccccc
Q 009648          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-F---------PAAILN  226 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~-~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~-~---------~~~~~~  226 (530)
                      .+++++|+|||+|+.......+.. ..+++|+.++.+|+++|++. +++|||++||.++..++ .         ++.+..
T Consensus        72 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~  151 (322)
T PLN02662         72 SVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSD  151 (322)
T ss_pred             HHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCC
Confidence            999999999999986543333333 67899999999999999987 89999999997642121 1         111112


Q ss_pred             c------hhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccc--c----eeecc--cCcccCCCCCHHHH
Q 009648          227 L------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--N----ITLSQ--EDTLFGGQVSNLQV  288 (530)
Q Consensus       227 ~------~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~--~----~~~~~--~~~~~~g~V~v~DV  288 (530)
                      +      ...|+.+|..+|++++    +.|+++++|||+++|||+.......  .    +..+.  ......++||++|+
T Consensus       152 p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  231 (322)
T PLN02662        152 PAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDV  231 (322)
T ss_pred             hhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHH
Confidence            2      2479999999998875    4699999999999999974321100  0    00000  01123468999999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      |++++.+++++.  .++.||+++ ..+++.++.+++.++++.
T Consensus       232 a~a~~~~~~~~~--~~~~~~~~g-~~~s~~e~~~~i~~~~~~  270 (322)
T PLN02662        232 ANAHIQAFEIPS--ASGRYCLVE-RVVHYSEVVKILHELYPT  270 (322)
T ss_pred             HHHHHHHhcCcC--cCCcEEEeC-CCCCHHHHHHHHHHHCCC
Confidence            999999998865  245788875 568999999999998764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.96  E-value=2.3e-28  Score=254.90  Aligned_cols=238  Identities=19%  Similarity=0.199  Sum_probs=175.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++||||||+||||++|+++|+++|++|++++|+..+...+...+. .  .      +  ...+++++.+|+.|.+.+.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~--~------~--~~~~~~~v~~Dl~d~~~~~   72 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLD-L--P------G--ATTRLTLWKADLAVEGSFD   72 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHh-c--c------C--CCCceEEEEecCCChhhHH
Confidence            45789999999999999999999999999999998765544322111 0  0      0  1136899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCC-CcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC-------Cccc------
Q 009648          159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-------FPAA------  223 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~-~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~-------~~~~------  223 (530)
                      ++++++|+|||||+.......+. ...+++|+.++.+|+++|++++ ++||||+||.++....       .++.      
T Consensus        73 ~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~  152 (351)
T PLN02650         73 DAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDF  152 (351)
T ss_pred             HHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhh
Confidence            99999999999998643322233 3678999999999999999886 7899999998553211       1110      


Q ss_pred             ---cccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccccee-----e-cc----cCcccCCCCCHH
Q 009648          224 ---ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNIT-----L-SQ----EDTLFGGQVSNL  286 (530)
Q Consensus       224 ---~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~~~-----~-~~----~~~~~~g~V~v~  286 (530)
                         ...+.+.|+.+|..+|.+++    +.|++++++||++||||+........+.     + ..    ......+++|++
T Consensus       153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~  232 (351)
T PLN02650        153 CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLD  232 (351)
T ss_pred             hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHH
Confidence               01133579999999998875    3699999999999999975321100000     0 00    011124789999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      |+|++++.+++++.  .++.| ++++...++.++.+++.++++.
T Consensus       233 Dva~a~~~~l~~~~--~~~~~-i~~~~~~s~~el~~~i~~~~~~  273 (351)
T PLN02650        233 DLCNAHIFLFEHPA--AEGRY-ICSSHDATIHDLAKMLREKYPE  273 (351)
T ss_pred             HHHHHHHHHhcCcC--cCceE-EecCCCcCHHHHHHHHHHhCcc
Confidence            99999999998765  24578 5566678999999999998763

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.96  E-value=1.6e-28  Score=255.85  Aligned_cols=233  Identities=16%  Similarity=0.188  Sum_probs=178.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~sl~  158 (530)
                      |+||||||+||||++|+++|+++ |++|++++|+..+...+.                  ...+++++.+|+. +.+.+.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~Dl~~~~~~~~   63 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV------------------NHPRMHFFEGDITINKEWIE   63 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc------------------cCCCeEEEeCCCCCCHHHHH
Confidence            58999999999999999999987 699999999765433221                  1246999999997 777888


Q ss_pred             HHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccc-c------
Q 009648          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA-I------  224 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~-~------  224 (530)
                      ++++++|+|||+|+....  ...+....+++|+.++.+|+++|++.+ ++|||+||..++....     ++. .      
T Consensus        64 ~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~  142 (347)
T PRK11908         64 YHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPI  142 (347)
T ss_pred             HHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcC
Confidence            899999999999985422  234556778999999999999999988 6999999987643221     111 1      


Q ss_pred             ccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-------------------cccceeecccCcccCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFGG  281 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-------------------~~~~~~~~~~~~~~~g  281 (530)
                      .++.+.|+.+|.++|++++.    .|++++++|++.+|||+....                   ....+.+...+....+
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~  222 (347)
T PRK11908        143 NKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRA  222 (347)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeec
Confidence            13456899999999998864    789999999999999974210                   0111112222233446


Q ss_pred             CCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCC-CCCChhHHHHHHHhcCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRSL-SYCKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~-~~~t~~~i~ell~~v~g~~~  332 (530)
                      +||++|+|++++.+++++.. ..+++|||+++ ...++.++.+++.++++..+
T Consensus       223 ~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~  275 (347)
T PRK11908        223 FTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYP  275 (347)
T ss_pred             cccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcc
Confidence            89999999999999987631 35789999997 46899999999999988654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=2.5e-28  Score=251.47  Aligned_cols=238  Identities=20%  Similarity=0.164  Sum_probs=177.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++||||||+||||++|+++|+++|++|++++|+..+...+......   .        ....+++++.+|+.|.+.+.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~--------~~~~~~~~~~~Dl~~~~~~~   72 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLAL---D--------GAKERLKLFKADLLEESSFE   72 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhc---c--------CCCCceEEEecCCCCcchHH
Confidence            467999999999999999999999999999999987654443221110   0        01257899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCC-CcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCC----------ccccc-
Q 009648          159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF----------PAAIL-  225 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~-~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~----------~~~~~-  225 (530)
                      ++++++|+|||+|+.......+. ...+++|+.++.+|+++|++. +++|||++||.++..++.          ++.+. 
T Consensus        73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~  152 (322)
T PLN02986         73 QAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSD  152 (322)
T ss_pred             HHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCC
Confidence            99999999999998653332233 346899999999999999986 789999999986533221          11111 


Q ss_pred             -----cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccc--cc----eeeccc--CcccCCCCCHHHH
Q 009648          226 -----NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET--HN----ITLSQE--DTLFGGQVSNLQV  288 (530)
Q Consensus       226 -----~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~--~~----~~~~~~--~~~~~g~V~v~DV  288 (530)
                           .+...|+.+|..+|.++++    .|+++++|||+.||||+......  ..    +..+..  +.....+||++|+
T Consensus       153 p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dv  232 (322)
T PLN02986        153 PSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDV  232 (322)
T ss_pred             hHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHH
Confidence                 1246799999999987763    69999999999999996432110  00    000110  1122368999999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      |++++++++++.  .++.||+.+ ...++.++.+++.++++.
T Consensus       233 a~a~~~al~~~~--~~~~yni~~-~~~s~~e~~~~i~~~~~~  271 (322)
T PLN02986        233 ALAHIKALETPS--ANGRYIIDG-PIMSVNDIIDILRELFPD  271 (322)
T ss_pred             HHHHHHHhcCcc--cCCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence            999999999875  256899965 568999999999999874

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.96  E-value=1.7e-28  Score=258.61  Aligned_cols=233  Identities=15%  Similarity=0.021  Sum_probs=178.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+..+|+|||||||||||++|++.|+++||+|++++|.......                 .  ....++++.+|++|.+
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~-----------------~--~~~~~~~~~~Dl~d~~   77 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-----------------E--DMFCHEFHLVDLRVME   77 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc-----------------c--ccccceEEECCCCCHH
Confidence            34567899999999999999999999999999999986532100                 0  0123578889999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC---------ccc
Q 009648          156 QIEPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF---------PAA  223 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~---------~~~  223 (530)
                      .+..++.++|+|||+|+....   ...+....+..|+.++.+|+++|++.++++|||+||.+++....         ++.
T Consensus        78 ~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~  157 (370)
T PLN02695         78 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESD  157 (370)
T ss_pred             HHHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCccc
Confidence            999999999999999985421   11233445788999999999999999999999999987643211         111


Q ss_pred             --cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccc----------------cceeecccCcccCC
Q 009648          224 --ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET----------------HNITLSQEDTLFGG  281 (530)
Q Consensus       224 --~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~----------------~~~~~~~~~~~~~g  281 (530)
                        +..+.+.|+.+|.++|++++.    .|++++++|+++||||++.+...                ..+.+...+....+
T Consensus       158 ~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~  237 (370)
T PLN02695        158 AWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRS  237 (370)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEe
Confidence              356777899999999998753    69999999999999997532110                11112122233346


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      +||++|+++++++++++..   +++|||+++...++.++.+++.+++|.
T Consensus       238 ~i~v~D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~  283 (370)
T PLN02695        238 FTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENK  283 (370)
T ss_pred             EEeHHHHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCC
Confidence            7999999999999887753   689999999999999999999998875

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.96  E-value=4.1e-28  Score=246.28  Aligned_cols=242  Identities=20%  Similarity=0.219  Sum_probs=185.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++|+||||+||||++||+.|+++||.|++.+|++++... .+.++++  +++        ..++.++.+||.|.+++.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~~l--~~a--------~~~l~l~~aDL~d~~sf~   73 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLRKL--EGA--------KERLKLFKADLLDEGSFD   73 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHHhc--ccC--------cccceEEeccccccchHH
Confidence            57899999999999999999999999999999999987333 2223322  322        256999999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCC-cchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC----C------ccccc-
Q 009648          159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG----F------PAAIL-  225 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~-~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~----~------~~~~~-  225 (530)
                      ++++|||+|||+|.....+..+++ ..++.++.|+.|++++|++.+ |+|||+.||.++..+.    .      +..+. 
T Consensus        74 ~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd  153 (327)
T KOG1502|consen   74 KAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD  153 (327)
T ss_pred             HHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc
Confidence            999999999999997766555544 678999999999999999987 9999999998653322    1      11111 


Q ss_pred             -----cchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccccc------eeecc---cCcccCCCCCHHH
Q 009648          226 -----NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHN------ITLSQ---EDTLFGGQVSNLQ  287 (530)
Q Consensus       226 -----~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~------~~~~~---~~~~~~g~V~v~D  287 (530)
                           .-.+.|..+|..+|+.+.    +.|+..+.|.|+.|+||.........      ++-+.   .......+||++|
T Consensus       154 ~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrD  233 (327)
T KOG1502|consen  154 LDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRD  233 (327)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHH
Confidence                 112469999999998876    47899999999999999765421111      01111   1122234799999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~  334 (530)
                      ||.+.+.+++++.  .++.|.++++. ..+.++.+++.+.+-....+
T Consensus       234 VA~AHv~a~E~~~--a~GRyic~~~~-~~~~ei~~~l~~~~P~~~ip  277 (327)
T KOG1502|consen  234 VALAHVLALEKPS--AKGRYICVGEV-VSIKEIADILRELFPDYPIP  277 (327)
T ss_pred             HHHHHHHHHcCcc--cCceEEEecCc-ccHHHHHHHHHHhCCCCCCC
Confidence            9999999999997  46788788876 45999999999998877633

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=1.9e-28  Score=241.95  Aligned_cols=236  Identities=14%  Similarity=0.062  Sum_probs=192.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |++|||||+||||++.+++++++.  ++|+++++=.  .....+.               .....+++.|+++|+.|.+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~---------------~~~~~~~~~fv~~DI~D~~~   65 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA---------------DVEDSPRYRFVQGDICDREL   65 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH---------------hhhcCCCceEEeccccCHHH
Confidence            579999999999999999999986  4567776521  1122221               11234799999999999999


Q ss_pred             HHHHhC--CCcEEEEcccCC--CCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCccCCC-------Ccccc
Q 009648          157 IEPALG--NASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG-------FPAAI  224 (530)
Q Consensus       157 l~~a~~--~vD~VI~~Ag~~--~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v~~~~-------~~~~~  224 (530)
                      +.++|+  ..|+|||.|+.+  +.+..++...+++|+.||.+|++++++...+ ||+|||+.-++..-       .+..+
T Consensus        66 v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          66 VDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             HHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCC
Confidence            999998  589999999964  4456677888999999999999999998754 99999998663221       24456


Q ss_pred             ccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccc-----------ccccceeecccCcccCCCCCHHHHH
Q 009648          225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY-----------KETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~-----------~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      .+|.++|.++|+.++.++++    +|++++|.|+++-|||....           .....+.+.+.+....+|++++|-|
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~  225 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC  225 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence            88999999999999998875    89999999999999997643           2233445555666667899999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ++|..+|..+.  .|++|||+++...+..++.+++.+++++...
T Consensus       226 ~ai~~Vl~kg~--~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~  267 (340)
T COG1088         226 RAIDLVLTKGK--IGETYNIGGGNERTNLEVVKTICELLGKDKP  267 (340)
T ss_pred             HHHHHHHhcCc--CCceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence            99999999987  4999999999999999999999999998654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.96  E-value=8e-28  Score=247.81  Aligned_cols=238  Identities=18%  Similarity=0.146  Sum_probs=176.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+|+||||||+||||++|++.|+++|++|++++|+..+......... .  .        ....+++++.+|+.|.+.+.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~--~--------~~~~~~~~~~~D~~d~~~~~   72 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA-L--D--------GAKERLKLFKADLLDEGSFE   72 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh-c--c--------CCCCceEEEeCCCCCchHHH
Confidence            36899999999999999999999999999999998765433211110 0  0        01247899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC----------Cccccc
Q 009648          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAIL  225 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~----------~~~~~~  225 (530)
                      ++++++|+||||||....  ...++...+++|+.++.+++++|.+. ++++||++||.++....          .++.+.
T Consensus        73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~  152 (325)
T PLN02989         73 LAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFT  152 (325)
T ss_pred             HHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCC
Confidence            999999999999995432  12234566899999999999999885 57899999997552210          122222


Q ss_pred             cc------hhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccc--ce--eecccCc----ccCCCCCHHH
Q 009648          226 NL------FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH--NI--TLSQEDT----LFGGQVSNLQ  287 (530)
Q Consensus       226 ~~------~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~--~~--~~~~~~~----~~~g~V~v~D  287 (530)
                      ++      ...|+.+|+.+|++++.    .|++++++||+.+|||+.......  .+  .+..+..    ...+++|++|
T Consensus       153 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~D  232 (325)
T PLN02989        153 NPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRD  232 (325)
T ss_pred             chhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHH
Confidence            22      24699999999988863    699999999999999975421100  00  0001111    1246899999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      +|++++++++++.  .+++||++++ .+++.++.+++.++++.
T Consensus       233 va~a~~~~l~~~~--~~~~~ni~~~-~~s~~ei~~~i~~~~~~  272 (325)
T PLN02989        233 VALAHVKALETPS--ANGRYIIDGP-VVTIKDIENVLREFFPD  272 (325)
T ss_pred             HHHHHHHHhcCcc--cCceEEEecC-CCCHHHHHHHHHHHCCC
Confidence            9999999998865  2568999654 78999999999999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.96  E-value=7.7e-28  Score=250.91  Aligned_cols=236  Identities=14%  Similarity=0.102  Sum_probs=176.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|||||||||||++|++.|+++|++|+++.++..+...+.. +..           .....+++++.+|+.|.+++.++
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~Dl~d~~~~~~~   69 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-LAP-----------VAQSERFAFEKVDICDRAELARV   69 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhh-hhh-----------cccCCceEEEECCCcChHHHHHH
Confidence            589999999999999999999999886654443221111110 000           01124688999999999999999


Q ss_pred             hCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHh---------cCCCEEEEEcCCCccCCC-------C
Q 009648          161 LGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATI---------AKVNHFIMVSSLGTNKFG-------F  220 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~---------~gv~r~V~iSS~~v~~~~-------~  220 (530)
                      +++  +|+||||||....  ...++...+++|+.++.+|+++|.+         .++++||++||.+++...       .
T Consensus        70 ~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         70 FTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             HhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            974  8999999986533  2234567899999999999999986         356799999998763321       1


Q ss_pred             ccccccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v  285 (530)
                      ++....+.+.|+.+|.++|.+++    +.+++++++||++||||++...           ....+.+...+....+++|+
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  229 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYV  229 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcH
Confidence            22344567789999999998875    3689999999999999986321           01112222223334578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      +|+|++++.+++...  .+++|||+++...++.++.+.+.++++.
T Consensus       230 ~D~a~a~~~~~~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        230 EDHARALYCVATTGK--VGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             HHHHHHHHHHHhcCC--CCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            999999999998754  4789999999999999999999998885

>PLN02583 cinnamoyl-CoA reductase

Probab=99.96  E-value=2.1e-27  Score=242.66  Aligned_cols=243  Identities=16%  Similarity=0.139  Sum_probs=177.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+||||++|+++|+++||+|++++|+..+... .+.+..+  .      +  ...+++++.+|++|.+.+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~-~~~~~~l--~------~--~~~~~~~~~~Dl~d~~~~   72 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI-EKEIRGL--S------C--EEERLKVFDVDPLDYHSI   72 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhH-HHHHHhc--c------c--CCCceEEEEecCCCHHHH
Confidence            346789999999999999999999999999999996432211 1111111  0      0  124689999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC----------Ccccccc
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAILN  226 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~----------~~~~~~~  226 (530)
                      .+++.++|+|+|+++.......++...+++|+.++.+++++|.+. +++|||++||.++..++          +++.+..
T Consensus        73 ~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~  152 (297)
T PLN02583         73 LDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSD  152 (297)
T ss_pred             HHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCC
Confidence            999999999999886543222234567999999999999999986 68999999997653222          1111111


Q ss_pred             ch------hHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccc---cceeecccCcccCCCCCHHHHHHHHH
Q 009648          227 LF------WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET---HNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       227 ~~------~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~---~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                      ..      ..|+.+|..+|++++    ..|+++++|||++||||+......   ...... .. ...++||++|||++++
T Consensus       153 ~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~-~~-~~~~~v~V~Dva~a~~  230 (297)
T PLN02583        153 QNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMY-EN-GVLVTVDVNFLVDAHI  230 (297)
T ss_pred             HHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccC-cc-cCcceEEHHHHHHHHH
Confidence            11      169999999999985    369999999999999997642110   000110 11 1225799999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK  335 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~~  335 (530)
                      .+|+++.  .++.|++.++......++.+++.+.+.....+.
T Consensus       231 ~al~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  270 (297)
T PLN02583        231 RAFEDVS--SYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP  270 (297)
T ss_pred             HHhcCcc--cCCcEEEecCCCccHHHHHHHHHHhCCCCCCCC
Confidence            9999775  345798988875556789999999988765543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.96  E-value=1e-27  Score=258.11  Aligned_cols=245  Identities=15%  Similarity=0.082  Sum_probs=175.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH-------HHH------HHHHHHhhhhccccccCCCCCCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENL------VQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~-------~~l------~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ..++|+||||||+||||++|+++|+++|++|++++|.....       ..+      .+.+....        . ....+
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~-~~~~~  114 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWK--------E-VSGKE  114 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHH--------H-hhCCc
Confidence            45678999999999999999999999999999987532110       000      00111000        0 00146


Q ss_pred             eEEEEecCCCHhhHHHHhC--CCcEEEEcccCCCCc--cC---CCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCc
Q 009648          144 LELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VF---DITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT  215 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~--~vD~VI~~Ag~~~~~--~~---~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v  215 (530)
                      ++++.+|+.|.+.+.++++  ++|+|||+|+.....  ..   +....+++|+.|+.+|+++|++.+++ +||++||..+
T Consensus       115 v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~v  194 (442)
T PLN02572        115 IELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGE  194 (442)
T ss_pred             ceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeccee
Confidence            8999999999999999997  489999999753221  11   12345789999999999999999985 9999999877


Q ss_pred             cCCCC----c-----------c---ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc--------
Q 009648          216 NKFGF----P-----------A---AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--------  265 (530)
Q Consensus       216 ~~~~~----~-----------~---~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~--------  265 (530)
                      +....    +           +   .+..+.+.|+.+|.++|.+++.    .|++++++|+++||||++...        
T Consensus       195 YG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~  274 (442)
T PLN02572        195 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELIN  274 (442)
T ss_pred             cCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccc
Confidence            43210    0           1   1345667899999999988853    699999999999999975321        


Q ss_pred             --------------------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCC-CCcEEEEeCCCCCChhHHHHHH
Q 009648          266 --------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEVIAETTAPLTPMEELL  324 (530)
Q Consensus       266 --------------------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~-~g~vynv~~~~~~t~~~i~ell  324 (530)
                                          ....+.+...+....+++|++|+|++++.++++.... ..++||+++ ...++.++.+++
T Consensus       275 ~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i  353 (442)
T PLN02572        275 RLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLV  353 (442)
T ss_pred             ccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHH
Confidence                                0111222222333447899999999999999865311 126899977 568999999999


Q ss_pred             Hhc---CCCC
Q 009648          325 AKI---PSQR  331 (530)
Q Consensus       325 ~~v---~g~~  331 (530)
                      .++   +|..
T Consensus       354 ~~~~~~~g~~  363 (442)
T PLN02572        354 TKAGEKLGLD  363 (442)
T ss_pred             HHHHHhhCCC
Confidence            998   6643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.96  E-value=2.6e-27  Score=245.57  Aligned_cols=238  Identities=18%  Similarity=0.193  Sum_probs=172.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+||||++|+++|+++|++|++++|+......+.. +..+           ...++++++.+|++|.+.+
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~~~Dl~d~~~~   74 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRAL-----------QELGDLKIFGADLTDEESF   74 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhc-----------CCCCceEEEEcCCCChHHH
Confidence            346789999999999999999999999999999998754433211 1100           0113689999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCC-CcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC---------Ccc----
Q 009648          158 EPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG---------FPA----  222 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~-~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~---------~~~----  222 (530)
                      .++++++|+|||||+.......+. ...+++|+.++.+|+++|.+. ++++|||+||..++...         .+.    
T Consensus        75 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~  154 (338)
T PLN00198         75 EAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTD  154 (338)
T ss_pred             HHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCc
Confidence            999999999999998543222222 235789999999999999886 68999999998663311         000    


Q ss_pred             -----ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccc------------ceeecc-cCcc--
Q 009648          223 -----AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH------------NITLSQ-EDTL--  278 (530)
Q Consensus       223 -----~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~------------~~~~~~-~~~~--  278 (530)
                           ....+.+.|+.+|+++|.+++.    .|++++++||++||||+.......            .+.+.. .+..  
T Consensus       155 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  234 (338)
T PLN00198        155 VEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQML  234 (338)
T ss_pred             hhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccc
Confidence                 1123566799999999988764    699999999999999974321100            011111 1111  


Q ss_pred             --cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          279 --FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       279 --~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                        ..++||++|+|++++.+++.+.  .++.|+ +++...++.++.+++.+.++.
T Consensus       235 ~~~~~~i~V~D~a~a~~~~~~~~~--~~~~~~-~~~~~~s~~el~~~i~~~~~~  285 (338)
T PLN00198        235 SGSISITHVEDVCRAHIFLAEKES--ASGRYI-CCAANTSVPELAKFLIKRYPQ  285 (338)
T ss_pred             cCCcceeEHHHHHHHHHHHhhCcC--cCCcEE-EecCCCCHHHHHHHHHHHCCC
Confidence              1368999999999999998764  245685 444567999999999887764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.96  E-value=2.8e-27  Score=246.78  Aligned_cols=237  Identities=15%  Similarity=0.066  Sum_probs=176.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+||||++|++.|+++|++|++++|+..........+..              ..+++++.+|++|.+++.
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~   68 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--------------AKKIEDHFGDIRDAAKLR   68 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--------------cCCceEEEccCCCHHHHH
Confidence            367999999999999999999999999999999987654333221110              136788999999999999


Q ss_pred             HHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC------Cccccccc
Q 009648          159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG------FPAAILNL  227 (530)
Q Consensus       159 ~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~------~~~~~~~~  227 (530)
                      +++++  +|+||||||....  ...++...+++|+.++.+|+++|++.+ +++||++||..++...      .++....+
T Consensus        69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p  148 (349)
T TIGR02622        69 KAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGG  148 (349)
T ss_pred             HHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCC
Confidence            99975  6999999985322  233456678999999999999999876 7899999997663211      12234566


Q ss_pred             hhHHHHHHHHHHHHHHH-----------CCCCEEEEEcCcccCCCcccc------------cccceeecccCcccCCCCC
Q 009648          228 FWGVLLWKRKAEEALIA-----------SGLPYTIVRPGGMERPTDAYK------------ETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~-----------~gl~~tIvRPg~V~Gp~~~~~------------~~~~~~~~~~~~~~~g~V~  284 (530)
                      .+.|+.+|.++|.+++.           .|+++++|||++||||++...            ....+.+. ++....+++|
T Consensus       149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~rd~i~  227 (349)
T TIGR02622       149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPDATRPWQH  227 (349)
T ss_pred             CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCCcccceee
Confidence            78899999999988864           289999999999999975211            11122222 2334457899


Q ss_pred             HHHHHHHHHHHHhCC---CCCCCcEEEEeCC--CCCChhHHHHHHHhcCCC
Q 009648          285 NLQVAELLACMAKNR---SLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       285 v~DVA~ai~~ll~~~---~~~~g~vynv~~~--~~~t~~~i~ell~~v~g~  330 (530)
                      ++|+|++++.+++..   ....+++|||+++  ...++.++.+.+.+.++.
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            999999999887642   1123689999974  577888888877776553

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.96  E-value=3.1e-27  Score=250.65  Aligned_cols=231  Identities=25%  Similarity=0.330  Sum_probs=179.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH--HHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV--QSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~--~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +..+++|||||||||||++++++|+++|++|++++|+..+.....  ..+.             ....+++++.+|++|.
T Consensus        57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~-------------~~~~~v~~v~~Dl~d~  123 (390)
T PLN02657         57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTK-------------KELPGAEVVFGDVTDA  123 (390)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHh-------------hhcCCceEEEeeCCCH
Confidence            456789999999999999999999999999999999876432110  0000             0125789999999999


Q ss_pred             hhHHHHhC----CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhH
Q 009648          155 VQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWG  230 (530)
Q Consensus       155 ~sl~~a~~----~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~  230 (530)
                      +++.++++    ++|+||||+|....   .....+++|+.++.+++++|++.|++|||++||.++.         .+...
T Consensus       124 ~~l~~~~~~~~~~~D~Vi~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~---------~p~~~  191 (390)
T PLN02657        124 DSLRKVLFSEGDPVDVVVSCLASRTG---GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ---------KPLLE  191 (390)
T ss_pred             HHHHHHHHHhCCCCcEEEECCccCCC---CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc---------CcchH
Confidence            99999987    59999999885321   1234578999999999999999999999999998762         23456


Q ss_pred             HHHHHHHHHHHHHH--CCCCEEEEEcCcccCCCccc----ccccceeecccCcc-cCCCCCHHHHHHHHHHHHhCCCCCC
Q 009648          231 VLLWKRKAEEALIA--SGLPYTIVRPGGMERPTDAY----KETHNITLSQEDTL-FGGQVSNLQVAELLACMAKNRSLSY  303 (530)
Q Consensus       231 Y~~sK~~~E~~l~~--~gl~~tIvRPg~V~Gp~~~~----~~~~~~~~~~~~~~-~~g~V~v~DVA~ai~~ll~~~~~~~  303 (530)
                      |..+|...|+.++.  .+++|+||||+++|+.....    .....+.+..++.. ...+||++|+|++++.++.++. ..
T Consensus       192 ~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~-~~  270 (390)
T PLN02657        192 FQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES-KI  270 (390)
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-cc
Confidence            88999999999986  89999999999999864322    11122222222222 3356999999999999998765 46


Q ss_pred             CcEEEEeCC-CCCChhHHHHHHHhcCCCCCC
Q 009648          304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       304 g~vynv~~~-~~~t~~~i~ell~~v~g~~~~  333 (530)
                      +++|||+++ +..++.++.+++.+++|+...
T Consensus       271 ~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~  301 (390)
T PLN02657        271 NKVLPIGGPGKALTPLEQGEMLFRILGKEPK  301 (390)
T ss_pred             CCEEEcCCCCcccCHHHHHHHHHHHhCCCCc
Confidence            899999986 578999999999999997643

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.95  E-value=1.6e-27  Score=255.93  Aligned_cols=231  Identities=13%  Similarity=0.070  Sum_probs=172.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ...|+||||||+||||++|+++|+++|++|++++|...........+              ....+++++.+|+.+.   
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~--------------~~~~~~~~~~~Di~~~---  180 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL--------------FGNPRFELIRHDVVEP---  180 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh--------------ccCCceEEEECccccc---
Confidence            45679999999999999999999999999999998643211100000              1124788999998764   


Q ss_pred             HHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccc-----ccc
Q 009648          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AIL  225 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~-----~~~  225 (530)
                        .+.++|+|||||+....  ...+....+++|+.++.+|+++|+++++ +||++||..++...     .++     .+.
T Consensus       181 --~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        181 --ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             --cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence              35689999999985432  2234556789999999999999999986 89999998764321     111     133


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-------------ccceeecccCcccCCCCCHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-------------~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      .+.+.|+.+|..+|++++.    .+++++++|+++|||++.....             ...+.+...+....++||++|+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dv  337 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDL  337 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHH
Confidence            4456799999999998864    5899999999999999743110             1112222222334468999999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |++++.++++..   +++|||+++...++.+|++++.++++..
T Consensus       338 a~ai~~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~  377 (436)
T PLN02166        338 VDGLVALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSS  377 (436)
T ss_pred             HHHHHHHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCC
Confidence            999999997653   5799999999999999999999999854

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.95  E-value=4e-27  Score=244.86  Aligned_cols=238  Identities=13%  Similarity=-0.007  Sum_probs=177.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH--HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+||||||+||||++|+++|+++|++|++++|+....  ..+.. +... +       ......+++++.+|++|.+.+.
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~-~-------~~~~~~~~~~~~~Dl~d~~~l~   71 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEH-IYED-P-------HNVNKARMKLHYGDLTDSSNLR   71 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhh-hhhc-c-------ccccccceeEEEeccCCHHHHH
Confidence            5899999999999999999999999999999986421  11111 1000 0       0001246899999999999999


Q ss_pred             HHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCC---EEEEEcCCCccCCC-----Ccccccc
Q 009648          159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKFG-----FPAAILN  226 (530)
Q Consensus       159 ~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~---r~V~iSS~~v~~~~-----~~~~~~~  226 (530)
                      +++++  +|+|||||+....  ...+....+++|+.|+.+|+++|++.+++   +|||+||..++...     .++.+..
T Consensus        72 ~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  151 (343)
T TIGR01472        72 RIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFY  151 (343)
T ss_pred             HHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC
Confidence            99985  5999999996432  12223455788999999999999998764   89999998663321     2334456


Q ss_pred             chhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc--c------------cc-ceeecccCcccCCCCCHHH
Q 009648          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--E------------TH-NITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~--~------------~~-~~~~~~~~~~~~g~V~v~D  287 (530)
                      +.+.|+.+|.++|.+++.    .|+++++.|+.++|||+....  .            .. ...+..++....+++|++|
T Consensus       152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D  231 (343)
T TIGR01472       152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKD  231 (343)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHH
Confidence            778999999999999864    589999999999999863211  0            00 0111122333457899999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      +|++++.+++++.   +++|||+++...++.++.+++.+++|.
T Consensus       232 ~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~  271 (343)
T TIGR01472       232 YVEAMWLMLQQDK---PDDYVIATGETHSVREFVEVSFEYIGK  271 (343)
T ss_pred             HHHHHHHHHhcCC---CccEEecCCCceeHHHHHHHHHHHcCC
Confidence            9999999998754   468999999999999999999999885

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=4.8e-27  Score=243.06  Aligned_cols=224  Identities=14%  Similarity=0.146  Sum_probs=171.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++|+||||||+||||++|+++|+++|  ++|++++|+..+...+.+.+               ...+++++.+|+.|.+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~v~~Dl~d~~   66 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---------------PAPCLRFFIGDVRDKE   66 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---------------CCCcEEEEEccCCCHH
Confidence            346899999999999999999999986  79999999876543332111               0146899999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHH
Q 009648          156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~  233 (530)
                      .+.++++++|+||||||....  ...+....+++|+.++.+++++|.++++++||++||...         ..+...|+.
T Consensus        67 ~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~---------~~p~~~Y~~  137 (324)
T TIGR03589        67 RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA---------ANPINLYGA  137 (324)
T ss_pred             HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------CCCCCHHHH
Confidence            999999999999999986432  222334678999999999999999999999999999653         234567999


Q ss_pred             HHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--------cc-ceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          234 WKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------TH-NITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       234 sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--------~~-~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      +|+++|.+++.       .|+++++||||+|||+++....        .. .+.+. +......++|++|++++++.+++
T Consensus       138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHh
Confidence            99999988753       6899999999999998653211        10 12222 12223457999999999999998


Q ss_pred             CCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       298 ~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      +..  .+++|+ ..+...++.++.+.+.+...
T Consensus       217 ~~~--~~~~~~-~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       217 RML--GGEIFV-PKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             hCC--CCCEEc-cCCCcEEHHHHHHHHHhhCC
Confidence            753  467784 55555788888888887543

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.95  E-value=3e-27  Score=241.82  Aligned_cols=216  Identities=13%  Similarity=0.029  Sum_probs=162.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++| +|++++|...                              .+.+|++|.+.+.++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------------~~~~Dl~d~~~~~~~   49 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------------DYCGDFSNPEGVAET   49 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------------cccCCCCCHHHHHHH
Confidence            479999999999999999999999 7998887531                              234899999999999


Q ss_pred             hC--CCcEEEEcccCCCCcc--CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC-----CCccccccchhHH
Q 009648          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-----GFPAAILNLFWGV  231 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~~~--~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~-----~~~~~~~~~~~~Y  231 (530)
                      ++  ++|+|||||+......  .+....+++|+.++.+|+++|++.|+ +|||+||..++..     ..++.+.++.+.|
T Consensus        50 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y  128 (299)
T PRK09987         50 VRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVY  128 (299)
T ss_pred             HHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence            97  5899999999654322  23345578999999999999999986 8999999876422     1234456778889


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccc---------cceeecccCcccCCC----CCHHHHHHHHHHHHhC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET---------HNITLSQEDTLFGGQ----VSNLQVAELLACMAKN  298 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~---------~~~~~~~~~~~~~g~----V~v~DVA~ai~~ll~~  298 (530)
                      +.+|+++|++++....+++|+|+++||||++.....         ..+.+..+  .++..    ...+|+++++..++..
T Consensus       129 g~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d--~~g~~~~~~~~~d~~~~~~~~~~~~  206 (299)
T PRK09987        129 GETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVIND--QFGAPTGAELLADCTAHAIRVALNK  206 (299)
T ss_pred             HHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCC--CcCCCCCHHHHHHHHHHHHHHhhcc
Confidence            999999999999888899999999999997532111         11111111  11122    3345566677666655


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ..  .+++||+++++..++.+|++++.++++..+
T Consensus       207 ~~--~~giyni~~~~~~s~~e~~~~i~~~~~~~g  238 (299)
T PRK09987        207 PE--VAGLYHLVASGTTTWHDYAALVFEEARKAG  238 (299)
T ss_pred             CC--CCCeEEeeCCCCccHHHHHHHHHHHHHhcC
Confidence            43  257999999999999999999988766544

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.6e-27  Score=240.00  Aligned_cols=230  Identities=24%  Similarity=0.203  Sum_probs=179.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +||||||+||||++|++.|+++||+|++++|...+...+                    ..++.++.+|+.|.+.+..++
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~d~~~~~~~~~~~   61 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL--------------------LSGVEFVVLDLTDRDLVDELA   61 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccc--------------------ccccceeeecccchHHHHHHH
Confidence            499999999999999999999999999999987643321                    046789999999998888888


Q ss_pred             CCC-cEEEEcccCCCCccC---CCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC------Ccc-ccccchhH
Q 009648          162 GNA-SVVICCIGASEKEVF---DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPA-AILNLFWG  230 (530)
Q Consensus       162 ~~v-D~VI~~Ag~~~~~~~---~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~------~~~-~~~~~~~~  230 (530)
                      +++ |+|||+|+.......   ++...+++|+.++.+++++|++.++++|||.||.++....      .++ .+..+.+.
T Consensus        62 ~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          62 KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             hcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            888 999999996543222   2234789999999999999999999999998886543321      222 23455557


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccc-ce---e--eccc---------CcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH-NI---T--LSQE---------DTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~-~~---~--~~~~---------~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|+++|+.++.    .|+++++|||++||||++...... .+   .  +..+         ......++|++|++++
T Consensus       142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~  221 (314)
T COG0451         142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA  221 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence            99999999999985    469999999999999987643111 00   0  1111         1111247999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCC-CCChhHHHHHHHhcCCCCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~-~~t~~~i~ell~~v~g~~~~~  334 (530)
                      ++.+++++..  + +||++++. ..++.++.+.+.+.++.....
T Consensus       222 ~~~~~~~~~~--~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~  262 (314)
T COG0451         222 LLLALENPDG--G-VFNIGSGTAEITVRELAEAVAEAVGSKAPL  262 (314)
T ss_pred             HHHHHhCCCC--c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcc
Confidence            9999999872  3 99999997 889999999999999987653

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.95  E-value=8.7e-27  Score=242.72  Aligned_cols=233  Identities=12%  Similarity=0.060  Sum_probs=174.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+||||||+||||++|+++|+++|++ |++++|...  ....+.    ..           ....+++++.+|++|.+++
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~d~~~~   65 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA----DV-----------SDSERYVFEHADICDRAEL   65 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH----hc-----------ccCCceEEEEecCCCHHHH
Confidence            47999999999999999999999976 554554321  111111    00           0124688899999999999


Q ss_pred             HHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhc---------CCCEEEEEcCCCccCCC-----
Q 009648          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA---------KVNHFIMVSSLGTNKFG-----  219 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~---------gv~r~V~iSS~~v~~~~-----  219 (530)
                      .++++  ++|+||||||....  ...+....+++|+.++.+|+++|++.         ++++||++||..++...     
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~  145 (352)
T PRK10084         66 DRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE  145 (352)
T ss_pred             HHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence            99996  48999999986432  22345678999999999999999874         46799999997664321     


Q ss_pred             ----------CccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecc
Q 009648          220 ----------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ  274 (530)
Q Consensus       220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~  274 (530)
                                .++...++...|+.+|+++|.+++.    .|++++++|++.||||++....           ...+.+..
T Consensus       146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PRK10084        146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (352)
T ss_pred             ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeC
Confidence                      1223456778899999999988763    6899999999999999853210           11112222


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      .+....++||++|+|++++.++++..  .+++|||++++..++.++.+.+.+.++.
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVTEGK--AGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcCC--CCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            23334568999999999999998754  4799999999999999999999998875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.95  E-value=1.5e-26  Score=240.66  Aligned_cols=246  Identities=17%  Similarity=0.114  Sum_probs=179.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++++|||||||||||++|++.|+++|++|++++|...........+...  .      + ....+++++.+|+.|.+.
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~--~------~-~~~~~~~~~~~D~~~~~~   72 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKEL--A------G-DLGDNLVFHKVDLRDKEA   72 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHh--h------c-ccCccceEEecCcCCHHH
Confidence            455689999999999999999999999999999997643222211111111  0      0 012468899999999999


Q ss_pred             HHHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccccc
Q 009648          157 IEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL  227 (530)
Q Consensus       157 l~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~  227 (530)
                      +..+++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++++||++||.+++...     .++...++
T Consensus        73 l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~  152 (352)
T PLN02240         73 LEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSA  152 (352)
T ss_pred             HHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCC
Confidence            998886  68999999986432  2234456789999999999999999999999999997663211     23345567


Q ss_pred             hhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCccc-------c-cc------------c--ceeecc------
Q 009648          228 FWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAY-------K-ET------------H--NITLSQ------  274 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~-------~-~~------------~--~~~~~~------  274 (530)
                      ...|+.+|+++|++++.     .+++++++|++.+||++...       . ..            .  .+.+..      
T Consensus       153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  232 (352)
T PLN02240        153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK  232 (352)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence            78899999999999863     46889999999999864210       0 00            0  011110      


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCC---CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNR---SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~---~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .+....++||++|+|++++.++.+.   ....+++||+++++.+++.++.+++.++++..
T Consensus       233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~  292 (352)
T PLN02240        233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKK  292 (352)
T ss_pred             CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCC
Confidence            1122335799999999999888642   11346899999999999999999999999854

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.95  E-value=4.7e-27  Score=252.83  Aligned_cols=231  Identities=13%  Similarity=0.068  Sum_probs=171.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.|+|||||||||||++|+++|+++|++|++++|.......-   +..           .....+++++.+|+.+.   
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~-----------~~~~~~~~~i~~D~~~~---  179 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMH-----------HFSNPNFELIRHDVVEP---  179 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhh-----------hccCCceEEEECCccCh---
Confidence            3568999999999999999999999999999998754321110   000           01125788999998764   


Q ss_pred             HHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccc-----ccc
Q 009648          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AIL  225 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~-----~~~  225 (530)
                        ++.++|+|||+|+....  ...+....+++|+.++.+|+++|++.++ +|||+||..++...     .++     .+.
T Consensus       180 --~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~  256 (442)
T PLN02206        180 --ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPI  256 (442)
T ss_pred             --hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCC
Confidence              34689999999985432  1224456789999999999999999986 99999998764321     111     122


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-------------ccceeecccCcccCCCCCHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-------------~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      .+.+.|+.+|.++|++++.    .+++++++|++++|||+.....             ...+.+...+....+++|++|+
T Consensus       257 ~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dv  336 (442)
T PLN02206        257 GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL  336 (442)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHH
Confidence            3356799999999998863    6899999999999999732110             1111222222333468999999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |++++.++++..   +++|||+++...++.+|++++.++++..
T Consensus       337 a~ai~~a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~  376 (442)
T PLN02206        337 VEGLMRLMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPN  376 (442)
T ss_pred             HHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence            999999997653   5799999999999999999999998743

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.95  E-value=8.5e-27  Score=262.81  Aligned_cols=235  Identities=15%  Similarity=0.159  Sum_probs=177.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+|+||||||+||||++|+++|+++ ||+|++++|.......+.                  ...+++++.+|++|...
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~------------------~~~~~~~~~gDl~d~~~  374 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL------------------GHPRFHFVEGDISIHSE  374 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc------------------CCCceEEEeccccCcHH
Confidence            56789999999999999999999986 799999999775432211                  12578999999998655


Q ss_pred             -HHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccccc----
Q 009648          157 -IEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI----  224 (530)
Q Consensus       157 -l~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~----  224 (530)
                       +.++++++|+|||+||....  ...+....+++|+.++.+++++|++++ ++|||+||..++...     .++..    
T Consensus       375 ~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T PRK08125        375 WIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV  453 (660)
T ss_pred             HHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence             67788999999999985432  122334568899999999999999998 799999998664321     11111    


Q ss_pred             ---ccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-------------------ccceeecccCcc
Q 009648          225 ---LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTL  278 (530)
Q Consensus       225 ---~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-------------------~~~~~~~~~~~~  278 (530)
                         ..+.+.|+.+|+++|++++.    .|++++++|+++||||+.....                   ...+.+...+..
T Consensus       454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~  533 (660)
T PRK08125        454 GPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQ  533 (660)
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCce
Confidence               12345799999999999863    6899999999999999753210                   111112222333


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC-CCChhHHHHHHHhcCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~-~~t~~~i~ell~~v~g~~  331 (530)
                      ..++||++|+|++++.++++.. ...+++|||+++. ..++.++.+++.++++..
T Consensus       534 ~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~  588 (660)
T PRK08125        534 KRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH  588 (660)
T ss_pred             eeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence            4568999999999999998753 1247899999985 689999999999999853

>PLN02686 cinnamoyl-CoA reductase

Probab=99.95  E-value=1.6e-26  Score=243.33  Aligned_cols=244  Identities=18%  Similarity=0.178  Sum_probs=176.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+||||++|++.|+++|++|++++|+.++...+. .+...   +..   + ....+++++.+|++|.++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~---~~~---~-~~~~~~~~v~~Dl~d~~~  121 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMF---GEM---G-RSNDGIWTVMANLTEPES  121 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhh---ccc---c-ccCCceEEEEcCCCCHHH
Confidence            355789999999999999999999999999999999876544432 11111   000   0 001358899999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCcc-C-CCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCC-----------cc
Q 009648          157 IEPALGNASVVICCIGASEKEV-F-DITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-----------PA  222 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~-~-~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~-----------~~  222 (530)
                      +.++++++|+|||+|+...... . .....+++|+.++.+|+++|++. +++||||+||..+..++.           ++
T Consensus       122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~  201 (367)
T PLN02686        122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE  201 (367)
T ss_pred             HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence            9999999999999998643221 1 12345788999999999999986 899999999964211111           10


Q ss_pred             ------ccccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccc--------ceeecccCcccCCCCC
Q 009648          223 ------AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--------NITLSQEDTLFGGQVS  284 (530)
Q Consensus       223 ------~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~--------~~~~~~~~~~~~g~V~  284 (530)
                            ....+...|+.+|.++|++++    ..|+++++|||++||||+.......        .+.+...+  ...++|
T Consensus       202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g--~~~~v~  279 (367)
T PLN02686        202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADG--LLATAD  279 (367)
T ss_pred             CCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCC--CcCeEE
Confidence                  112345579999999999885    3699999999999999975321100        01111111  124799


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++|+|++++.+++.. ....+++| |+++..+++.++.+.+.+++|..
T Consensus       280 V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~  326 (367)
T PLN02686        280 VERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLP  326 (367)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCC
Confidence            999999999999852 11246788 77888899999999999999754

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.95  E-value=9.5e-27  Score=262.89  Aligned_cols=237  Identities=14%  Similarity=0.135  Sum_probs=180.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +.|+|||||||||||++|+++|+++  |++|++++|..  .....+..               .....+++++.+|+.|.
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---------------~~~~~~v~~~~~Dl~d~   69 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---------------SKSSPNFKFVKGDIASA   69 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---------------cccCCCeEEEECCCCCh
Confidence            3579999999999999999999998  68999998853  12221110               01125799999999999


Q ss_pred             hhHHHHh--CCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC--------Cc
Q 009648          155 VQIEPAL--GNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG--------FP  221 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~--------~~  221 (530)
                      +.+..++  .++|+|||||+.....  ..+....+++|+.++.+|+++|++.+ ++||||+||..++...        .+
T Consensus        70 ~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         70 DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccc
Confidence            8887766  6899999999965432  22334568899999999999999987 8999999998663321        12


Q ss_pred             cccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecccCcccCCCCCHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~~~~g~V~v~  286 (530)
                      +....+.+.|+.+|+++|++++.    .+++++|+|+++|||+++....           ...+.+...+....++||++
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~  229 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCE  229 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence            22344667899999999999864    6899999999999999763211           11122222233334679999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      |+|++++.++++..  .+++||+++++..++.++.+.+.+++|...
T Consensus       230 Dva~a~~~~l~~~~--~~~vyni~~~~~~s~~el~~~i~~~~g~~~  273 (668)
T PLN02260        230 DVAEAFEVVLHKGE--VGHVYNIGTKKERRVIDVAKDICKLFGLDP  273 (668)
T ss_pred             HHHHHHHHHHhcCC--CCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence            99999999987754  478999999998999999999999998643

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.95  E-value=2.3e-26  Score=240.17  Aligned_cols=236  Identities=19%  Similarity=0.180  Sum_probs=171.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+||||++|+++|+++|++|++++|+..+...+...+.              ...+++++.+|+.|.+.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~~~~~~   73 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--------------EGDRLRLFRADLQEEGSF   73 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--------------cCCeEEEEECCCCCHHHH
Confidence            456799999999999999999999999999999998765554332111              125689999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCcc----CCCCc-----chHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC--------
Q 009648          158 EPALGNASVVICCIGASEKEV----FDITG-----PYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG--------  219 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~----~~~~~-----~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~--------  219 (530)
                      .++++++|+|||+|+......    .+...     .++.|+.++.+|+++|++.+ +++||++||.+++...        
T Consensus        74 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         74 DEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             HHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCC
Confidence            999999999999998643221    12222     34556799999999998874 8899999997664311        


Q ss_pred             --Ccc--ccc-------cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccce--ee---cccCc--
Q 009648          220 --FPA--AIL-------NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNI--TL---SQEDT--  277 (530)
Q Consensus       220 --~~~--~~~-------~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~---~~~~~--  277 (530)
                        .++  .+.       .+...|+.+|+++|++++.    .|++++++|+++||||+........+  .+   .....  
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~  233 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLF  233 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccc
Confidence              111  011       1224799999999998753    69999999999999997532110000  00   00000  


Q ss_pred             -------c---cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          278 -------L---FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       278 -------~---~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                             .   ..++||++|+|++++.+++.+.  .+++|++ ++...++.++.+++.++++.
T Consensus       234 ~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~--~~~~~~~-~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        234 SILSAVNSRMGSIALVHIEDICDAHIFLMEQTK--AEGRYIC-CVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             ccccccccccCceeEEeHHHHHHHHHHHHhCCC--cCccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence                   0   1257999999999999998754  2457865 55668999999999998863

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.95  E-value=1.3e-26  Score=235.90  Aligned_cols=235  Identities=12%  Similarity=0.051  Sum_probs=175.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|||||||||||++|+++|+++|  ++|++++|.......  +.+...           ....+++++.+|+.|.+++.+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~   67 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNL--ENLADL-----------EDNPRYRFVKGDIGDRELVSR   67 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhh--hhhhhh-----------ccCCCcEEEEcCCcCHHHHHH
Confidence            49999999999999999999987  789988874321110  011111           112478899999999999999


Q ss_pred             HhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCccCCC------Cccccccch
Q 009648          160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG------FPAAILNLF  228 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v~~~~------~~~~~~~~~  228 (530)
                      ++++  +|+|||||+....  ...+....+++|+.++.+++++|.+.+.+ +||++||.+++...      .+.....+.
T Consensus        68 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~  147 (317)
T TIGR01181        68 LFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS  147 (317)
T ss_pred             HHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC
Confidence            9987  8999999986432  22344567899999999999999987544 89999997653321      222334556


Q ss_pred             hHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHHHHHHHH
Q 009648          229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                      ..|+.+|+.+|.+++    +.+++++++|++++||+.....           ....+.+...+....+++|++|+|+++.
T Consensus       148 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~  227 (317)
T TIGR01181       148 SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIY  227 (317)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHH
Confidence            679999999998876    4689999999999999864321           1111111122223346899999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .++++..  .+++||++++...++.++.+++.++++..
T Consensus       228 ~~~~~~~--~~~~~~~~~~~~~s~~~~~~~i~~~~~~~  263 (317)
T TIGR01181       228 LVLEKGR--VGETYNIGGGNERTNLEVVETILELLGKD  263 (317)
T ss_pred             HHHcCCC--CCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            9998754  57899999999999999999999999864

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.95  E-value=1.6e-26  Score=233.51  Aligned_cols=214  Identities=17%  Similarity=0.120  Sum_probs=170.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +||||||+||||++|++.|+++|++|++++|..                                  +|+.|.+.+.+++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~----------------------------------~d~~~~~~~~~~~   46 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ----------------------------------LDLTDPEALERLL   46 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc----------------------------------cCCCCHHHHHHHH
Confidence            489999999999999999999999999998851                                  7999999999999


Q ss_pred             CCC--cEEEEcccCCCCcc--CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHH
Q 009648          162 GNA--SVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (530)
Q Consensus       162 ~~v--D~VI~~Ag~~~~~~--~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~  232 (530)
                      +++  |+||||||......  ......+++|+.++.+++++|++.+. +||++||..++...     .++...++...|+
T Consensus        47 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        47 RAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             HhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            865  99999998643221  22345689999999999999998886 99999998664321     1233345677899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEcCcccCCCcccc-cc---------cceeecccCcccCCCCCHHHHHHHHHHHHhCCCCC
Q 009648          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ET---------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (530)
Q Consensus       233 ~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~-~~---------~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~  302 (530)
                      .+|.++|++++..+++++|+||++|||+++... ..         ..+.+.  +.....+++++|+|++++.+++++. .
T Consensus       126 ~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~Dva~a~~~~~~~~~-~  202 (287)
T TIGR01214       126 QSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVV--DDQIGSPTYAKDLARVIAALLQRLA-R  202 (287)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEe--cCCCcCCcCHHHHHHHHHHHHhhcc-C
Confidence            999999999999899999999999999974211 00         011111  1123467999999999999998863 3


Q ss_pred             CCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       303 ~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .+++||++++...++.++.+++.+.++....
T Consensus       203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~  233 (287)
T TIGR01214       203 ARGVYHLANSGQCSWYEFAQAIFEEAGADGL  233 (287)
T ss_pred             CCCeEEEECCCCcCHHHHHHHHHHHhCcccc
Confidence            5899999999999999999999999987654

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.95  E-value=1.3e-26  Score=236.92  Aligned_cols=221  Identities=15%  Similarity=0.109  Sum_probs=160.5

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC---Hhh-HH
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---RVQ-IE  158 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---~~s-l~  158 (530)
                      ||||||+||||++|+++|+++|++|+++.|+........                       .++.+|+.|   .+. +.
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-----------------------~~~~~~~~d~~~~~~~~~   58 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-----------------------NLVDLDIADYMDKEDFLA   58 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-----------------------hhhhhhhhhhhhHHHHHH
Confidence            899999999999999999999998888777653221110                       112234443   333 33


Q ss_pred             HHh-----CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccccch
Q 009648          159 PAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLF  228 (530)
Q Consensus       159 ~a~-----~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~  228 (530)
                      .++     .++|+||||||.......+....+++|+.++.+|+++|++.++ +|||+||.+++...     .+.....+.
T Consensus        59 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~  137 (308)
T PRK11150         59 QIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL  137 (308)
T ss_pred             HHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC
Confidence            444     2689999999854332233345789999999999999999987 79999998763321     122335567


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccc---------ce------eec-ccCcccCCCCCHHHH
Q 009648          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH---------NI------TLS-QEDTLFGGQVSNLQV  288 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~---------~~------~~~-~~~~~~~g~V~v~DV  288 (530)
                      +.|+.+|..+|+++++    .+++++++|+++|||+++......         .+      .+. .......+++|++|+
T Consensus       138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~  217 (308)
T PRK11150        138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV  217 (308)
T ss_pred             CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence            7899999999988874    589999999999999976431100         00      011 111223467999999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      |++++.+++...   +++||++++...++.+|.+++.++++.
T Consensus       218 a~a~~~~~~~~~---~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        218 AAVNLWFWENGV---SGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             HHHHHHHHhcCC---CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            999999988653   579999999999999999999999874

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.95  E-value=3.4e-26  Score=234.46  Aligned_cols=229  Identities=26%  Similarity=0.203  Sum_probs=175.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|+++|++|++++|+..+...+                   ...+++++.+|+.|.+++.++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~~~~~l~~~   61 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-------------------EGLDVEIVEGDLRDPASLRKA   61 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-------------------ccCCceEEEeeCCCHHHHHHH
Confidence            4799999999999999999999999999999987543221                   013688999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC---C---Ccccccc---chhHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---G---FPAAILN---LFWGV  231 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~---~---~~~~~~~---~~~~Y  231 (530)
                      ++++|+|||+|+.......++...+++|+.++.+|+++|++.++++||++||..++..   +   .++....   ....|
T Consensus        62 ~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y  141 (328)
T TIGR03466        62 VAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHY  141 (328)
T ss_pred             HhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChH
Confidence            9999999999985433333456678999999999999999999999999999766332   1   1111122   23579


Q ss_pred             HHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccc-cceee---ccc----CcccCCCCCHHHHHHHHHHHHhCC
Q 009648          232 LLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET-HNITL---SQE----DTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       232 ~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~---~~~----~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                      +.+|.+.|+++++    .|++++++||+.+||++...... ..+..   ...    .....+++|++|+|++++.+++++
T Consensus       142 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~  221 (328)
T TIGR03466       142 KRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG  221 (328)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence            9999999998875    58999999999999997532110 00000   000    011235799999999999999885


Q ss_pred             CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       300 ~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .  .++.|++. +...++.++.+.+.+++|..
T Consensus       222 ~--~~~~~~~~-~~~~s~~e~~~~i~~~~g~~  250 (328)
T TIGR03466       222 R--IGERYILG-GENLTLKQILDKLAEITGRP  250 (328)
T ss_pred             C--CCceEEec-CCCcCHHHHHHHHHHHhCCC
Confidence            4  57788875 56789999999999999864

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.95  E-value=4.4e-26  Score=236.60  Aligned_cols=240  Identities=13%  Similarity=-0.014  Sum_probs=178.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH--HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++|+||||||+||||++|+++|+++|++|++++|+....  ..+ +.+...         ......+++++.+|+.|.+
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~Dl~d~~   73 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRL-DHIYID---------PHPNKARMKLHYGDLSDAS   73 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccch-hhhccc---------cccccCceEEEEecCCCHH
Confidence            3467899999999999999999999999999999975421  111 111000         0011246899999999999


Q ss_pred             hHHHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCC-----EEEEEcCCCccCCC----Ccc
Q 009648          156 QIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKFG----FPA  222 (530)
Q Consensus       156 sl~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-----r~V~iSS~~v~~~~----~~~  222 (530)
                      .+.++++.  +|+||||||....  ...+....+++|+.++.+|+++|.+.+++     +||++||..++...    .++
T Consensus        74 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~  153 (340)
T PLN02653         74 SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSET  153 (340)
T ss_pred             HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCC
Confidence            99998875  6999999996432  22344566789999999999999998875     89999997653321    233


Q ss_pred             ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cccee-ecccCcccCCCC
Q 009648          223 AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------THNIT-LSQEDTLFGGQV  283 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~~~~-~~~~~~~~~g~V  283 (530)
                      .+..+.+.|+.+|+++|.+++.    .++.++..|+.++|||+.....              ...+. ...++....+++
T Consensus       154 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i  233 (340)
T PLN02653        154 TPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWG  233 (340)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecce
Confidence            4456778899999999998853    6888888999999998543210              00111 112223344789


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      |++|+|++++.++++..   +++|||++++..++.++.+.+.++.|.
T Consensus       234 ~v~D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~  277 (340)
T PLN02653        234 FAGDYVEAMWLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGL  277 (340)
T ss_pred             eHHHHHHHHHHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCC
Confidence            99999999999998753   578999999999999999999999885

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.95  E-value=8.5e-27  Score=227.60  Aligned_cols=209  Identities=28%  Similarity=0.259  Sum_probs=166.4

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      |||||||||||++|+++|+++|+.|+.+.|+.........                  ..+++++.+|+.|.+.+.++++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~------------------~~~~~~~~~dl~~~~~~~~~~~   62 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK------------------KLNVEFVIGDLTDKEQLEKLLE   62 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH------------------HTTEEEEESETTSHHHHHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc------------------cceEEEEEeecccccccccccc
Confidence            7999999999999999999999999999998865443221                  0378999999999999999997


Q ss_pred             CC--cEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHH
Q 009648          163 NA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (530)
Q Consensus       163 ~v--D~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~  233 (530)
                      ..  |+|||+|+...  ....+....++.|+.++.+++++|++.++++||++||..++...     .++....+...|+.
T Consensus        63 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~  142 (236)
T PF01370_consen   63 KANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGA  142 (236)
T ss_dssp             HHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHH
T ss_pred             ccCceEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            65  99999998752  22234566789999999999999999999999999998664433     22334467788999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEEcCcccCCC---ccc-----------ccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          234 WKRKAEEALIA----SGLPYTIVRPGGMERPT---DAY-----------KETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       234 sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~---~~~-----------~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                      +|+..|++++.    .+++++++||+.|||++   ...           .....+.+...+....+++|++|+|++++.+
T Consensus       143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  222 (236)
T PF01370_consen  143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA  222 (236)
T ss_dssp             HHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence            99999999874    58999999999999998   111           1112133333344455789999999999999


Q ss_pred             HhCCCCCCCcEEEEe
Q 009648          296 AKNRSLSYCKVVEVI  310 (530)
Q Consensus       296 l~~~~~~~g~vynv~  310 (530)
                      ++++. ..+++|||+
T Consensus       223 ~~~~~-~~~~~yNig  236 (236)
T PF01370_consen  223 LENPK-AAGGIYNIG  236 (236)
T ss_dssp             HHHSC-TTTEEEEES
T ss_pred             HhCCC-CCCCEEEeC
Confidence            99987 679999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.95  E-value=1.9e-25  Score=222.43  Aligned_cols=232  Identities=38%  Similarity=0.553  Sum_probs=172.8

Q ss_pred             CCCCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           74 KADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        74 ~~~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +.....+|+||||||+|+||++|+++|+++||+|++++|+.++...+..                 ...+++++.+|+.|
T Consensus        11 ~~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----------------~~~~~~~~~~Dl~d   73 (251)
T PLN00141         11 DAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-----------------QDPSLQIVRADVTE   73 (251)
T ss_pred             ccccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-----------------cCCceEEEEeeCCC
Confidence            3345567899999999999999999999999999999999876443211                 12468999999998


Q ss_pred             -HhhHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc--c----cc
Q 009648          154 -RVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA--A----IL  225 (530)
Q Consensus       154 -~~sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~--~----~~  225 (530)
                       .+.+.+.+ .++|+|||++|....  .+....+++|+.++.++++++++.+++|||++||.+++......  .    ..
T Consensus        74 ~~~~l~~~~~~~~d~vi~~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         74 GSDKLVEAIGDDSDAVICATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             CHHHHHHHhhcCCCEEEECCCCCcC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHH
Confidence             46777788 689999999985421  12234467899999999999999999999999998763321111  0    01


Q ss_pred             cchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 009648          226 NLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~  305 (530)
                      +....|...|..+|+++++.|++|++||||++++....    ..+.+........++|+++|||+++++++.++. ..+.
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~----~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~-~~~~  226 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT----GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPE-SSYK  226 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC----ceEEECCCCccccCcccHHHHHHHHHHHhcChh-hcCc
Confidence            22333566799999999999999999999999976321    122222233334568999999999999998876 4678


Q ss_pred             EEEEeCCCCCChhHHHHHHHhcCC
Q 009648          306 VVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       306 vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ++.+++..+-...++.+++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        227 VVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             EEEEecCCCCCchhHHHHHHHhhc
Confidence            899998665555777777776653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.95  E-value=6.2e-26  Score=234.66  Aligned_cols=239  Identities=15%  Similarity=0.104  Sum_probs=174.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|+++|++|++++|...........+...            ...++.++.+|+.|.+.+.++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~~~~~   68 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL------------GGKHPTFVEGDIRNEALLTEI   68 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh------------cCCCceEEEccCCCHHHHHHH
Confidence            57999999999999999999999999999987543222221111111            013578899999999999988


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccc-cchhH
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL-NLFWG  230 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~-~~~~~  230 (530)
                      ++  ++|+|||+||....  ........+++|+.++.+|+++|+++++++||++||.+++...     .++.+. .+...
T Consensus        69 ~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~  148 (338)
T PRK10675         69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_pred             HhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence            86  68999999986432  1223346789999999999999999999999999998663211     122222 46788


Q ss_pred             HHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcc--ccc-------c-------------cceeecc------cCc
Q 009648          231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDA--YKE-------T-------------HNITLSQ------EDT  277 (530)
Q Consensus       231 Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~--~~~-------~-------------~~~~~~~------~~~  277 (530)
                      |+.+|.++|++++.     .+++++++|++.+||+...  +..       .             ..+.+..      .+.
T Consensus       149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PRK10675        149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCc
Confidence            99999999998863     3789999999999886311  000       0             0010100      112


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ...++||++|+|++++.++++. ....+++|||++++.+++.++.+++.+++|..
T Consensus       229 ~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  283 (338)
T PRK10675        229 GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKP  283 (338)
T ss_pred             EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCC
Confidence            2236799999999999998752 11346899999999999999999999999864

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=2e-25  Score=223.54  Aligned_cols=217  Identities=16%  Similarity=0.106  Sum_probs=178.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||++|++|.+|++.|. .+++|++++|..                                  +|++|.+.+.++
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------------~Ditd~~~v~~~   45 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------------LDITDPDAVLEV   45 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------------ccccChHHHHHH
Confidence            359999999999999999998 779999998854                                  899999999999


Q ss_pred             hCC--CcEEEEcccCCCCccCC--CCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC-----CCccccccchhHH
Q 009648          161 LGN--ASVVICCIGASEKEVFD--ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-----GFPAAILNLFWGV  231 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~~~~~--~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~-----~~~~~~~~~~~~Y  231 (530)
                      |+.  -|+|||||+.+..+..+  ....|.+|..|+.|++++|++.|. ++||+||..+++.     ..+++..+|...|
T Consensus        46 i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY  124 (281)
T COG1091          46 IRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVY  124 (281)
T ss_pred             HHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence            975  59999999987665544  356699999999999999999998 9999999766322     2455678899999


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCc-cccccccee------ecccCcccCCCCCHHHHHHHHHHHHhCCCCCCC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTD-AYKETHNIT------LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC  304 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~-~~~~~~~~~------~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g  304 (530)
                      |++|+++|+.+++.+-+++|||.+||||..+ +|..++.-.      +......++..++..|+|++|+.++....  .+
T Consensus       125 G~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~--~~  202 (281)
T COG1091         125 GRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK--EG  202 (281)
T ss_pred             hHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc--cC
Confidence            9999999999999999999999999999865 333333222      22234556678999999999999998875  46


Q ss_pred             cEEEEeCCCCCChhHHHHHHHhcCCCCCCCC
Q 009648          305 KVVEVIAETTAPLTPMEELLAKIPSQRAEPK  335 (530)
Q Consensus       305 ~vynv~~~~~~t~~~i~ell~~v~g~~~~~~  335 (530)
                      ++||+++....++.++++.+.+.++..+...
T Consensus       203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~  233 (281)
T COG1091         203 GVYHLVNSGECSWYEFAKAIFEEAGVDGEVI  233 (281)
T ss_pred             cEEEEeCCCcccHHHHHHHHHHHhCCCcccc
Confidence            6999999998888999999999888777443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.94  E-value=1.2e-25  Score=228.60  Aligned_cols=213  Identities=19%  Similarity=0.148  Sum_probs=162.6

Q ss_pred             EEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC-
Q 009648           84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-  162 (530)
Q Consensus        84 LVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~-  162 (530)
                      |||||+||||++|++.|+++|++|+++.+..                                 .+|+.|.+++.++++ 
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------------------------~~Dl~~~~~l~~~~~~   47 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------------------------ELDLTRQADVEAFFAK   47 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------------------------cCCCCCHHHHHHHHhc
Confidence            6999999999999999999999988764321                                 289999999999886 


Q ss_pred             -CCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccc----cccchh
Q 009648          163 -NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA----ILNLFW  229 (530)
Q Consensus       163 -~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~----~~~~~~  229 (530)
                       ++|+|||||+....   ...+....+++|+.++.+|+++|+++++++||++||..++....     ++.    +..+..
T Consensus        48 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         48 EKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             cCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence             47999999986421   22344567899999999999999999999999999987633211     111    222333


Q ss_pred             -HHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccc-------------------cceee-cccCcccCCCCC
Q 009648          230 -GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-------------------HNITL-SQEDTLFGGQVS  284 (530)
Q Consensus       230 -~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~-------------------~~~~~-~~~~~~~~g~V~  284 (530)
                       .|+.+|.++|++++    ..+++++++||++|||+++.+...                   ..+.+ ...+....++||
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~  207 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH  207 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence             49999999998765    468999999999999997542110                   00111 112222336899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++|++++++.++++..  ..+.||++++...++.++.+++.++++..
T Consensus       208 v~Dv~~~~~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~~~~  252 (306)
T PLN02725        208 VDDLADAVVFLMRRYS--GAEHVNVGSGDEVTIKELAELVKEVVGFE  252 (306)
T ss_pred             HHHHHHHHHHHHhccc--cCcceEeCCCCcccHHHHHHHHHHHhCCC
Confidence            9999999999998754  35789999999999999999999998753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.94  E-value=1.9e-25  Score=228.07  Aligned_cols=226  Identities=14%  Similarity=0.090  Sum_probs=169.4

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      ||||||+||||++|++.|+++|+ +|++++|..... .+.    ..               ....+.+|+.+.+.++.+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~----~~---------------~~~~~~~d~~~~~~~~~~~   60 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL----NL---------------ADLVIADYIDKEDFLDRLE   60 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh----hh---------------hheeeeccCcchhHHHHHH
Confidence            69999999999999999999997 788887765321 111    00               1134668888887777665


Q ss_pred             ----CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC----cc-ccccchhHHH
Q 009648          162 ----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PA-AILNLFWGVL  232 (530)
Q Consensus       162 ----~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~----~~-~~~~~~~~Y~  232 (530)
                          .++|+|||||+.......+....+++|+.++.+|+++|+++++ +||++||.+++....    ++ ....+.+.|+
T Consensus        61 ~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~  139 (314)
T TIGR02197        61 KGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYG  139 (314)
T ss_pred             hhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence                4899999999965444455666789999999999999999887 899999987643211    11 1234677899


Q ss_pred             HHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccc---------------cceeecc------cCcccCCCCCH
Q 009648          233 LWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET---------------HNITLSQ------EDTLFGGQVSN  285 (530)
Q Consensus       233 ~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~---------------~~~~~~~------~~~~~~g~V~v  285 (530)
                      .+|+.+|+++++      .+++++++|++.+||+++.....               ..+.+..      .+....+++|+
T Consensus       140 ~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            999999998874      25789999999999997542110               0111111      11222368999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +|++++++.++.. .  .+++||++++...++.++.+.+.+++|...
T Consensus       220 ~D~a~~i~~~~~~-~--~~~~yni~~~~~~s~~e~~~~i~~~~g~~~  263 (314)
T TIGR02197       220 KDVVDVNLWLLEN-G--VSGIFNLGTGRARSFNDLADAVFKALGKDE  263 (314)
T ss_pred             HHHHHHHHHHHhc-c--cCceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence            9999999999988 3  478999999999999999999999998643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.94  E-value=3.8e-25  Score=248.87  Aligned_cols=236  Identities=18%  Similarity=0.134  Sum_probs=174.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHH--hCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH----
Q 009648           81 NLAFVAGATGKVGSRTVRELL--KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR----  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll--~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~----  154 (530)
                      |+|||||||||||++|+++|+  ++|++|++++|+... ..+.......            ...+++++.+|+.|.    
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~------------~~~~v~~~~~Dl~~~~~~~   67 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW------------GADRVVPLVGDLTEPGLGL   67 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc------------CCCcEEEEecccCCccCCc
Confidence            479999999999999999999  579999999997532 2221111110            115789999999984    


Q ss_pred             --hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC----ccc---cc
Q 009648          155 --VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAA---IL  225 (530)
Q Consensus       155 --~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~----~~~---~~  225 (530)
                        +.+..+ +++|+||||||..... ......+++|+.++.+++++|++.++++|||+||.+++....    ++.   ..
T Consensus        68 ~~~~~~~l-~~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~  145 (657)
T PRK07201         68 SEADIAEL-GDIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQ  145 (657)
T ss_pred             CHHHHHHh-cCCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhc
Confidence              445555 8999999999965432 233456789999999999999999999999999987642211    111   12


Q ss_pred             cchhHHHHHHHHHHHHHHH-CCCCEEEEEcCcccCCCcccccc----------c--ce-------eecccCcccCCCCCH
Q 009648          226 NLFWGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDAYKET----------H--NI-------TLSQEDTLFGGQVSN  285 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-~gl~~tIvRPg~V~Gp~~~~~~~----------~--~~-------~~~~~~~~~~g~V~v  285 (530)
                      .....|+++|+++|+++++ .|++++|+||++|||+.......          .  .+       .+...+....+++++
T Consensus       146 ~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  225 (657)
T PRK07201        146 GLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPV  225 (657)
T ss_pred             CCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeH
Confidence            2345799999999999984 78999999999999985321100          0  00       000011112256999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +|+|++++.++..+. ..+++||+++++..++.++.+.+.+.+|...
T Consensus       226 ddva~ai~~~~~~~~-~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~  271 (657)
T PRK07201        226 DYVADALDHLMHKDG-RDGQTFHLTDPKPQRVGDIYNAFARAAGAPP  271 (657)
T ss_pred             HHHHHHHHHHhcCcC-CCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence            999999999988655 4688999999999999999999999998754

>PLN00016 RNA-binding protein; Provisional

Probab=99.94  E-value=1.8e-25  Score=236.02  Aligned_cols=224  Identities=16%  Similarity=0.187  Sum_probs=165.9

Q ss_pred             CCCCEEEEE----CCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH----HHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           78 KDDNLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ----SVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        78 ~~~k~VLVT----GAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~----~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      .++++||||    |||||||++|+++|+++||+|++++|+......+..    .+..+            ...+++++.+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l------------~~~~v~~v~~  117 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL------------SSAGVKTVWG  117 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh------------hhcCceEEEe
Confidence            445789999    999999999999999999999999998765332210    00000            0135899999


Q ss_pred             cCCCHhhHHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC--ccccc
Q 009648          150 DLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--PAAIL  225 (530)
Q Consensus       150 Dl~d~~sl~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~--~~~~~  225 (530)
                      |+.|   +..++  .++|+|||+++.              +..++.+|+++|++.|++||||+||.+++....  +....
T Consensus       118 D~~d---~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~  180 (378)
T PLN00016        118 DPAD---VKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG  180 (378)
T ss_pred             cHHH---HHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC
Confidence            9987   33443  579999999763              245789999999999999999999988743221  11111


Q ss_pred             cchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccc----------cccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~----------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                      .+...+. +|+.+|+++++.+++|++|||+++||+++...          ....+.+...+....+++|++|+|++++.+
T Consensus       181 ~~~~p~~-sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~  259 (378)
T PLN00016        181 DAVKPKA-GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALV  259 (378)
T ss_pred             CcCCCcc-hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHH
Confidence            1122222 79999999999999999999999999965321          011122222233344689999999999999


Q ss_pred             HhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       296 l~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +.++. ..+++||++++..+++.++.+++.+++|...
T Consensus       260 l~~~~-~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  295 (378)
T PLN00016        260 VGNPK-AAGQIFNIVSDRAVTFDGMAKACAKAAGFPE  295 (378)
T ss_pred             hcCcc-ccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence            99865 3579999999999999999999999998754

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.94  E-value=1.2e-25  Score=220.26  Aligned_cols=233  Identities=23%  Similarity=0.259  Sum_probs=192.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+-.+.|+|||||+|+++|..|.+.|.+|++-.|..+..      +..+++-|++        ++|-+..+|+.|+++
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~------~r~lkvmGdL--------GQvl~~~fd~~DedS  123 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD------PRHLKVMGDL--------GQVLFMKFDLRDEDS  123 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc------hhheeecccc--------cceeeeccCCCCHHH
Confidence            45677889999999999999999999999999999976532      2223444554        789999999999999


Q ss_pred             HHHHhCCCcEEEEcccCC-CCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHH
Q 009648          157 IEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~-~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK  235 (530)
                      |+++++..++|||+.|.- ...   ...+.++|+.+.++|++.|++.|+.||||+|+.+++.        ..-+-|.++|
T Consensus       124 Ir~vvk~sNVVINLIGrd~eTk---nf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv--------~s~Sr~LrsK  192 (391)
T KOG2865|consen  124 IRAVVKHSNVVINLIGRDYETK---NFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV--------KSPSRMLRSK  192 (391)
T ss_pred             HHHHHHhCcEEEEeeccccccC---CcccccccchHHHHHHHHHHhhChhheeehhhccccc--------cChHHHHHhh
Confidence            999999999999999942 222   2345689999999999999999999999999998642        2335689999


Q ss_pred             HHHHHHHHHCCCCEEEEEcCcccCCCcccccc---------cceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcE
Q 009648          236 RKAEEALIASGLPYTIVRPGGMERPTDAYKET---------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (530)
Q Consensus       236 ~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~---------~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~v  306 (530)
                      .++|..+++.--..||+||..|||..|++..-         ...++..+.......|.+.|||.+|+.++++++ +.|++
T Consensus       193 ~~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~-s~Gkt  271 (391)
T KOG2865|consen  193 AAGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD-SMGKT  271 (391)
T ss_pred             hhhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc-ccCce
Confidence            99999999988899999999999999876321         112233333344457999999999999999997 78999


Q ss_pred             EEEeCCCCCChhHHHHHHHhcCCCCCCCC
Q 009648          307 VEVIAETTAPLTPMEELLAKIPSQRAEPK  335 (530)
Q Consensus       307 ynv~~~~~~t~~~i~ell~~v~g~~~~~~  335 (530)
                      |.++++..+.+.++.|++-++......+.
T Consensus       272 ye~vGP~~yql~eLvd~my~~~~~~~ry~  300 (391)
T KOG2865|consen  272 YEFVGPDRYQLSELVDIMYDMAREWPRYV  300 (391)
T ss_pred             eeecCCchhhHHHHHHHHHHHHhhccccc
Confidence            99999999999999999999998877443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.93  E-value=1.2e-24  Score=222.18  Aligned_cols=237  Identities=21%  Similarity=0.167  Sum_probs=174.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +||||||+|+||++|++.|+++|++|++++|...........+              ....+++++.+|+.|.+++.+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~D~~~~~~~~~~~   66 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG--------------ERITRVTFVEGDLRDRELLDRLF   66 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh--------------ccccceEEEECCCCCHHHHHHHH
Confidence            4899999999999999999999999998876443222111100              00126888999999999999988


Q ss_pred             C--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHH
Q 009648          162 G--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (530)
Q Consensus       162 ~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~  232 (530)
                      +  ++|+||||||....  ...+....++.|+.++.+++++|.+.++++||++||.+++...     .++....+...|+
T Consensus        67 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~  146 (328)
T TIGR01179        67 EEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYG  146 (328)
T ss_pred             HhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchH
Confidence            5  69999999986422  2223455688999999999999999999999999997653211     1223345667899


Q ss_pred             HHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccc-------cc--------------cceeecc------cCcccC
Q 009648          233 LWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK-------ET--------------HNITLSQ------EDTLFG  280 (530)
Q Consensus       233 ~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~-------~~--------------~~~~~~~------~~~~~~  280 (530)
                      .+|+.+|.+++.     .+++++++||+.+||+.....       ..              ..+.+..      .+....
T Consensus       147 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  226 (328)
T TIGR01179       147 RSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR  226 (328)
T ss_pred             HHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence            999999988863     689999999999999853210       00              0011100      111223


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++||++|+|++++.++.... ...+++||++++...++.+|.+.+.+++|...
T Consensus       227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~  279 (328)
T TIGR01179       227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDF  279 (328)
T ss_pred             eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCc
Confidence            57999999999999987531 13578999999999999999999999998643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.93  E-value=4.4e-24  Score=222.95  Aligned_cols=375  Identities=29%  Similarity=0.336  Sum_probs=253.1

Q ss_pred             ccccccccccccCCCCccccceeccccccceeecCCCCCCCCCCCCccccccccccCCcccccccCCCCCCCCCCCCCCE
Q 009648            3 ICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNL   82 (530)
Q Consensus         3 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~r~~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~k~   82 (530)
                      .|+++.+.+++.|..-++.++..+.|-...-.++.......+...++..+.+.................+.+..+.+.++
T Consensus         2 ~s~~~~~~lst~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~s~s~~~~~~~~~~~~~~~~e~~v~~~~~~~~~~~~   81 (411)
T KOG1203|consen    2 ASFLMAASLSTNPKLPFYISFRIPRFQVRSKIRASPLQSSSSFFSSRSSRKRKTPISPVTGTTSEAEVSPPNNNSKKPTT   81 (411)
T ss_pred             cccccccccccCCCCccccccccccceeccceeccccCCCCCcccccchhhccCCCCccccccceeeeccCCCCCCCCCe
Confidence            48999999999998887877776666555444443333444444454444433333222221111111123334677789


Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-HHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-IEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-l~~a~  161 (530)
                      |||+||||.+|+.+++.|+++|+.|++++|+.++...++..              .+...++..+..|.....+ +..++
T Consensus        82 VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~--------------~~~d~~~~~v~~~~~~~~d~~~~~~  147 (411)
T KOG1203|consen   82 VLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV--------------FFVDLGLQNVEADVVTAIDILKKLV  147 (411)
T ss_pred             EEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc--------------cccccccceeeeccccccchhhhhh
Confidence            99999999999999999999999999999999988876530              1112455666666554433 33333


Q ss_pred             C----CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          162 G----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       162 ~----~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      +    +..+|+.|+|...... |....+.+++.|++|+++||+.+|++|||++|+++...++.+.......+.+..+|..
T Consensus       148 ~~~~~~~~~v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~  226 (411)
T KOG1203|consen  148 EAVPKGVVIVIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLK  226 (411)
T ss_pred             hhccccceeEEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHh
Confidence            3    4568888877543332 5566788999999999999999999999999999987776655444446678899999


Q ss_pred             HHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccC--CCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          238 AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG--GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~--g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +|++++++|+.|+|||+|........................+  +.|.+.|+|++++.++.++.....++.+++.....
T Consensus       227 ~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~g  306 (411)
T KOG1203|consen  227 AEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEG  306 (411)
T ss_pred             HHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCC
Confidence            9999999999999999999876433222211111111112222  37999999999999999988666688888887766


Q ss_pred             ChhHHHHHHHhcCCCCCCCCccCCC---CCCCCCCCCCCCcCCCCCCCCCCccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 009648          316 PLTPMEELLAKIPSQRAEPKESIAP---EKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTP  392 (530)
Q Consensus       316 t~~~i~ell~~v~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rPlsp~~~~~~~kpp~sp~p  392 (530)
                      +...+.+++.-+....-.....+..   .... .... +...+........+......-.|| ++|..|.+.+.+.....
T Consensus       307 pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~  383 (411)
T KOG1203|consen  307 PGRPYKVLLELFPLDESSQTYPVFAARPTEAG-FCRV-VPFSAFRPANKEDPPLDPGLSERP-ARFSSLIQDPVDGLAGE  383 (411)
T ss_pred             CCccHHHHHhhcccccccccccceeccccccc-eeEe-cccccccccccccCccccccccCc-chhhhhccCCCcccccc
Confidence            6666666665554444333322222   2222 2233 445555555555566677789999 99999999998888877


Q ss_pred             CCC
Q 009648          393 TAP  395 (530)
Q Consensus       393 ~~~  395 (530)
                      -..
T Consensus       384 ~~t  386 (411)
T KOG1203|consen  384 QQT  386 (411)
T ss_pred             ccc
Confidence            433

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=1.5e-24  Score=204.78  Aligned_cols=180  Identities=33%  Similarity=0.361  Sum_probs=147.8

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      |+|+||||++|++|+++|+++||+|++++|++++...                     ..+++++.+|+.|.+++.++++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------------------~~~~~~~~~d~~d~~~~~~al~   59 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------------------SPGVEIIQGDLFDPDSVKAALK   59 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------------------CTTEEEEESCTTCHHHHHHHHT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------------------ccccccceeeehhhhhhhhhhh
Confidence            7999999999999999999999999999999987664                     2789999999999999999999


Q ss_pred             CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc---ccccchhHHHHHHHHHH
Q 009648          163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAE  239 (530)
Q Consensus       163 ~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~---~~~~~~~~Y~~sK~~~E  239 (530)
                      ++|+|||++|....           +...+++++++|+++|++|||++|+.+++......   .....+..|...|..+|
T Consensus        60 ~~d~vi~~~~~~~~-----------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  128 (183)
T PF13460_consen   60 GADAVIHAAGPPPK-----------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAE  128 (183)
T ss_dssp             TSSEEEECCHSTTT-----------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHH
T ss_pred             hcchhhhhhhhhcc-----------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHH
Confidence            99999999986443           27789999999999999999999999885533221   11222356899999999


Q ss_pred             HHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       240 ~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +.+++.+++|++|||+++||+...   ...+ ...+.....++|+++|||++|+.+|+|
T Consensus       129 ~~~~~~~~~~~ivrp~~~~~~~~~---~~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  129 EALRESGLNWTIVRPGWIYGNPSR---SYRL-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHSTSEEEEEEESEEEBTTSS---SEEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             HHHHhcCCCEEEEECcEeEeCCCc---ceeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence            999999999999999999998632   1111 111333344789999999999999875

...

>PLN02996 fatty acyl-CoA reductase

Probab=99.93  E-value=1.1e-24  Score=237.25  Aligned_cols=253  Identities=14%  Similarity=0.086  Sum_probs=178.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhH---HHHHHHHHHhhhh-------ccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRA---ENLVQSVKQMKLD-------GELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~---~~l~~~~~~~~l~-------~~~~~~g~~~~~~v  144 (530)
                      .++++|||||||||||++|++.|++.+   .+|+++.|.....   +.+..++.+..+.       ++.  ...+...++
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~--~~~~~~~kv   86 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGEN--LNSLISEKV   86 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchh--hhhhhhcCE
Confidence            467899999999999999999999865   4789999976421   1111111110000       000  000112689


Q ss_pred             EEEEecCC-------CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCcc
Q 009648          145 ELVECDLE-------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTN  216 (530)
Q Consensus       145 ~~v~~Dl~-------d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~  216 (530)
                      +++.||+.       |.+.++.+++++|+|||||+..... .+....+++|+.|+.+|+++|++. ++++|||+||..++
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vy  165 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVC  165 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEe
Confidence            99999998       4455778889999999999975532 345667899999999999999986 78999999998664


Q ss_pred             CCCCc----------cc----------------------------------------------cccchhHHHHHHHHHHH
Q 009648          217 KFGFP----------AA----------------------------------------------ILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       217 ~~~~~----------~~----------------------------------------------~~~~~~~Y~~sK~~~E~  240 (530)
                      .....          ..                                              .....+.|+.+|+.+|+
T Consensus       166 G~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        166 GEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             cCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            22110          00                                              00112459999999999


Q ss_pred             HHHH--CCCCEEEEEcCcccCCCcccccc-----------------cce-eecccCcccCCCCCHHHHHHHHHHHHhCC-
Q 009648          241 ALIA--SGLPYTIVRPGGMERPTDAYKET-----------------HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNR-  299 (530)
Q Consensus       241 ~l~~--~gl~~tIvRPg~V~Gp~~~~~~~-----------------~~~-~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-  299 (530)
                      ++++  .|++++|+||++|+|++......                 ..+ .+..++....++|+++|++++++.++... 
T Consensus       246 lv~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~  325 (491)
T PLN02996        246 LLGNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHA  325 (491)
T ss_pred             HHHHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhh
Confidence            9986  58999999999999986432110                 001 11122333457899999999999998753 


Q ss_pred             -CCCCCcEEEEeCC--CCCChhHHHHHHHhcCCCCCC
Q 009648          300 -SLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       300 -~~~~g~vynv~~~--~~~t~~~i~ell~~v~g~~~~  333 (530)
                       ....+++||++++  ...++.++.+++.++++..+.
T Consensus       326 ~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        326 GGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             ccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence             1124689999988  888999999999999887664

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.93  E-value=2.7e-24  Score=222.77  Aligned_cols=242  Identities=20%  Similarity=0.192  Sum_probs=172.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHH---HHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH--
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--  154 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~---~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--  154 (530)
                      +|||||||||||++|+++|+++|  ++|++++|+.+...   .+.+.+....+...     .....+++++.+|+.++  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQE-----DLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCc-----hhhhCCEEEEeCCcCcccC
Confidence            48999999999999999999999  67999999876432   22222222211110     00015799999999753  


Q ss_pred             ----hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccc--
Q 009648          155 ----VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA--  223 (530)
Q Consensus       155 ----~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~--  223 (530)
                          +.+..+.+++|+|||||+..... ......+++|+.++.+++++|.+.++++||++||.++.....     .+.  
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~~-~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~  154 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNWV-YPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI  154 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEeccC-CcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence                45677778999999999865422 233455789999999999999999998999999987743321     111  


Q ss_pred             ---cccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCcccc-cccce------------eecccCcccCCCCC
Q 009648          224 ---ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYK-ETHNI------------TLSQEDTLFGGQVS  284 (530)
Q Consensus       224 ---~~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~~~~-~~~~~------------~~~~~~~~~~g~V~  284 (530)
                         ......+|+.+|+.+|+++++   .|++++++|||+++|+..... .....            .+........++++
T Consensus       155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  234 (367)
T TIGR01746       155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTP  234 (367)
T ss_pred             cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCccc
Confidence               112245799999999999875   499999999999999732110 00000            01111111235799


Q ss_pred             HHHHHHHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          285 NLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      ++|+|++++.++.+... ..+++||++++...++.++.+++.+ +|.
T Consensus       235 vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~  280 (367)
T TIGR01746       235 VDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGY  280 (367)
T ss_pred             HHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCC
Confidence            99999999999987652 1278999999999999999999988 654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.93  E-value=6.3e-26  Score=230.98  Aligned_cols=217  Identities=20%  Similarity=0.145  Sum_probs=157.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ||||||||+|+||++|++.|.++|++|+.+.|..                                  +|+.|.+.+.+.
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~----------------------------------~dl~d~~~~~~~   46 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD----------------------------------LDLTDPEAVAKL   46 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC----------------------------------S-TTSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh----------------------------------cCCCCHHHHHHH
Confidence            6899999999999999999999999999997762                                  899999999998


Q ss_pred             hCC--CcEEEEcccCCCCcc--CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHH
Q 009648          161 LGN--ASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~~~--~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      +..  .|+||||||....+.  .+....+++|+.++.+|+++|.+.|+ ++||+||..++...     .+++..+|.+.|
T Consensus        47 ~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y  125 (286)
T PF04321_consen   47 LEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVY  125 (286)
T ss_dssp             HHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred             HHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence            864  799999999764332  23556799999999999999999997 99999998774332     344567888999


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccc-------eeecccCcccCCCCCHHHHHHHHHHHHhCCCC--C
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHN-------ITLSQEDTLFGGQVSNLQVAELLACMAKNRSL--S  302 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~-------~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~--~  302 (530)
                      |++|+++|+.+++..-+++|||++++||+.........       -.+..........++++|+|+++..++++...  .
T Consensus       126 G~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~  205 (286)
T PF04321_consen  126 GRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGAS  205 (286)
T ss_dssp             HHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GG
T ss_pred             HHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccc
Confidence            99999999999986669999999999999443211111       11111223345679999999999999987641  2


Q ss_pred             CCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       303 ~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ..++||+++.+.++..++++.+.+.++...
T Consensus       206 ~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~  235 (286)
T PF04321_consen  206 PWGIYHLSGPERVSRYEFAEAIAKILGLDP  235 (286)
T ss_dssp             G-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred             cceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence            369999999999999999999999999877

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05865 hypothetical protein; Provisional

Probab=99.92  E-value=3.2e-24  Score=243.75  Aligned_cols=197  Identities=18%  Similarity=0.179  Sum_probs=160.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|+....  +                    ..+++++.+|+.|.+.+.++
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~--------------------~~~v~~v~gDL~D~~~l~~a   58 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W--------------------PSSADFIAADIRDATAVESA   58 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c--------------------ccCceEEEeeCCCHHHHHHH
Confidence            4799999999999999999999999999999975321  0                    13578999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      ++++|+|||||+....       .+++|+.++.+++++|++.++++||++||..                    |.++|+
T Consensus        59 l~~vD~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------K~aaE~  111 (854)
T PRK05865         59 MTGADVVAHCAWVRGR-------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------QPRVEQ  111 (854)
T ss_pred             HhCCCEEEECCCcccc-------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------HHHHHH
Confidence            9999999999975321       4789999999999999999999999999853                    889999


Q ss_pred             HHHHCCCCEEEEEcCcccCCCccccccc--ceee-c-ccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCC
Q 009648          241 ALIASGLPYTIVRPGGMERPTDAYKETH--NITL-S-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP  316 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~Gp~~~~~~~~--~~~~-~-~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t  316 (530)
                      +++++|++++++||++|||++.......  ...+ . .......++||++|+|++++.++++.. ..+++|||+++...+
T Consensus       112 ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~-~~ggvyNIgsg~~~S  190 (854)
T PRK05865        112 MLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV-IDSGPVNLAAPGELT  190 (854)
T ss_pred             HHHHcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC-cCCCeEEEECCCccc
Confidence            9999999999999999999963221111  1111 1 111222368999999999999987543 347899999999999


Q ss_pred             hhHHHHHHHhc
Q 009648          317 LTPMEELLAKI  327 (530)
Q Consensus       317 ~~~i~ell~~v  327 (530)
                      +.++.+.+.+.
T Consensus       191 i~EIae~l~~~  201 (854)
T PRK05865        191 FRRIAAALGRP  201 (854)
T ss_pred             HHHHHHHHhhh
Confidence            99999988774

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.92  E-value=5e-24  Score=215.72  Aligned_cols=203  Identities=17%  Similarity=0.118  Sum_probs=157.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +||||||||+||++++++|+++|++|++++|+.++..                      ..+++.+.+|+.|.+++..++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----------------------~~~~~~~~~d~~d~~~l~~a~   58 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----------------------GPNEKHVKFDWLDEDTWDNPF   58 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----------------------CCCCccccccCCCHHHHHHHH
Confidence            4899999999999999999999999999999986432                      145677889999999999998


Q ss_pred             ------CC-CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHH
Q 009648          162 ------GN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (530)
Q Consensus       162 ------~~-vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~s  234 (530)
                            ++ +|.|+|+++....           ......+++++|+++|++|||++|+.+....+             ..
T Consensus        59 ~~~~~~~g~~d~v~~~~~~~~~-----------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------~~  114 (285)
T TIGR03649        59 SSDDGMEPEISAVYLVAPPIPD-----------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------PA  114 (285)
T ss_pred             hcccCcCCceeEEEEeCCCCCC-----------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------ch
Confidence                  67 9999999874211           13456789999999999999999997653221             12


Q ss_pred             HHHHHHHHHHC-CCCEEEEEcCcccCCCccc--c----cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEE
Q 009648          235 KRKAEEALIAS-GLPYTIVRPGGMERPTDAY--K----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (530)
Q Consensus       235 K~~~E~~l~~~-gl~~tIvRPg~V~Gp~~~~--~----~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vy  307 (530)
                      +...|+++++. |++|++|||+++++.....  .    ....+... .+.....+|+++|||++++.+|.++. ..+++|
T Consensus       115 ~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~  192 (285)
T TIGR03649       115 MGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSA-TGDGKIPFVSADDIARVAYRALTDKV-APNTDY  192 (285)
T ss_pred             HHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEec-CCCCccCcccHHHHHHHHHHHhcCCC-cCCCeE
Confidence            34567788875 9999999999998653111  0    01112211 12233468999999999999998875 458899


Q ss_pred             EEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          308 EVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       308 nv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++++++.+++.++++++++++|+.-
T Consensus       193 ~l~g~~~~s~~eia~~l~~~~g~~v  217 (285)
T TIGR03649       193 VVLGPELLTYDDVAEILSRVLGRKI  217 (285)
T ss_pred             EeeCCccCCHHHHHHHHHHHhCCce
Confidence            9999999999999999999999754

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.92  E-value=3.6e-24  Score=221.38  Aligned_cols=241  Identities=18%  Similarity=0.120  Sum_probs=177.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+.+++||||+||+|++|+++|+++|  .+|++++.......+..+..            + +....++++.+|+.|..
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~------------~-~~~~~v~~~~~D~~~~~   68 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT------------G-FRSGRVTVILGDLLDAN   68 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh------------c-ccCCceeEEecchhhhh
Confidence            456789999999999999999999998  89999998875333221110            1 12478999999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc------c--ccc
Q 009648          156 QIEPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------A--AIL  225 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~------~--~~~  225 (530)
                      .+.+++.++ .|||||+...  ....+....+++|+.||.+++++|++.|+++|||+||..+...+..      +  .+.
T Consensus        69 ~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   69 SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCcc
Confidence            999999999 8888887432  2333467889999999999999999999999999999877555432      2  123


Q ss_pred             cchhHHHHHHHHHHHHHHHC----CCCEEEEEcCcccCCCcccccccc----------eeecccCcccCCCCCHHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIAS----GLPYTIVRPGGMERPTDAYKETHN----------ITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~~----gl~~tIvRPg~V~Gp~~~~~~~~~----------~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      +....|+.+|..+|+++++.    ++..++|||..||||++.......          ..++. .....++++++.||.+
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~-~~~~~~~~~~~Nva~a  226 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGD-GENLNDFTYGENVAWA  226 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeec-cccccceEEechhHHH
Confidence            33457999999999999863    388999999999999986532211          11111 1233455555555554


Q ss_pred             HHHH---Hh-CCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          292 LACM---AK-NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       292 i~~l---l~-~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .+.+   |. ......|++|+|.+++.+.+-++...+.+.+|....
T Consensus       227 hilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~  272 (361)
T KOG1430|consen  227 HILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP  272 (361)
T ss_pred             HHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence            4432   22 444468999999999988666666677777776654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=7.2e-24  Score=212.47  Aligned_cols=245  Identities=16%  Similarity=0.125  Sum_probs=188.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++||||||+||||+|.+-+|+++|+.|++++.-......-.+++++.-          ....+|.|+++|+.|.+.+++
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~----------~~~~~v~f~~~Dl~D~~~L~k   71 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLL----------GEGKSVFFVEGDLNDAEALEK   71 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhc----------CCCCceEEEEeccCCHHHHHH
Confidence            4689999999999999999999999999999864433333333343331          123789999999999999999


Q ss_pred             HhC--CCcEEEEcccC--CCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccccccc-chh
Q 009648          160 ALG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILN-LFW  229 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~--~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~-~~~  229 (530)
                      +|+  .+|.|+|.|+.  ......++..++.+|+.|+.+|+++|++++++.|||.||+.++...     .+..... +..
T Consensus        72 vF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~  151 (343)
T KOG1371|consen   72 LFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTN  151 (343)
T ss_pred             HHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCC
Confidence            996  58999999984  3556677788999999999999999999999999999999883322     1223334 778


Q ss_pred             HHHHHHHHHHHHHHH----CCCCEEEEEcCcccC--CCcccc-----ccccee-------ecc--------------cCc
Q 009648          230 GVLLWKRKAEEALIA----SGLPYTIVRPGGMER--PTDAYK-----ETHNIT-------LSQ--------------EDT  277 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~G--p~~~~~-----~~~~~~-------~~~--------------~~~  277 (530)
                      .|+++|.++|+++..    .++.+++||..+++|  |.+...     ...++.       ++.              ++.
T Consensus       152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt  231 (343)
T KOG1371|consen  152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGT  231 (343)
T ss_pred             cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCC
Confidence            899999999999985    568899999999998  443321     111111       000              113


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~  334 (530)
                      ...+.||+.|+|+..+.++..... ...++||++.+...+..+|.+++++..|..-+.
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~  289 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKK  289 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCc
Confidence            334679999999999999986542 345699999999999999999999999876543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.91  E-value=5.1e-24  Score=214.57  Aligned_cols=226  Identities=17%  Similarity=0.171  Sum_probs=164.3

Q ss_pred             EEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeE----EEEecCCCHhhH
Q 009648           83 AFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE----LVECDLEKRVQI  157 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~----~v~~Dl~d~~sl  157 (530)
                      ||||||+|.||+.||++|++.+ .++++++|++.++..+.++++..           ....++.    .+.+|++|.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~-----------~~~~~v~~~~~~vigDvrd~~~l   69 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR-----------FPDPKVRFEIVPVIGDVRDKERL   69 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH-----------C--TTCEEEEE--CTSCCHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc-----------ccccCcccccCceeecccCHHHH
Confidence            7999999999999999999998 68999999999999888766432           1123444    457999999999


Q ss_pred             HHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHH
Q 009648          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~  233 (530)
                      ..+|+  +.|+|||+|+....  ....+.+.+++|+.||+|++++|.++++++||++||.-+         .+|.+.||+
T Consensus        70 ~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA---------v~PtnvmGa  140 (293)
T PF02719_consen   70 NRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA---------VNPTNVMGA  140 (293)
T ss_dssp             HHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC---------SS--SHHHH
T ss_pred             HHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc---------CCCCcHHHH
Confidence            99998  89999999996432  223456779999999999999999999999999999866         456788999


Q ss_pred             HHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc--------cccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          234 WKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       234 sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~--------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +|+.+|.++..       .+.++++||.|+|+|..+...        ....+.+... ....-++++++.++.++.++..
T Consensus       141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p-~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDP-DMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECET-T-EEEEE-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCC-CcEEEEecHHHHHHHHHHHHhh
Confidence            99999999985       246899999999999765431        1222222211 1112258899999999999887


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ..  .|++|-+-.+..+.+.++++.+.+..|..
T Consensus       220 ~~--~geifvl~mg~~v~I~dlA~~~i~~~g~~  250 (293)
T PF02719_consen  220 AK--GGEIFVLDMGEPVKILDLAEAMIELSGLE  250 (293)
T ss_dssp             ----TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred             CC--CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence            65  58899999989999999999999999854

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.91  E-value=8.6e-23  Score=217.73  Aligned_cols=232  Identities=16%  Similarity=0.178  Sum_probs=190.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..+|+||||||+|-||+.+|+++++.+ .++++++|++.++..+..++.+.           ++..++.++-||+.|.+
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~-----------~~~~~~~~~igdVrD~~  315 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREK-----------FPELKLRFYIGDVRDRD  315 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhh-----------CCCcceEEEecccccHH
Confidence            5689999999999999999999999998 68999999999888887776643           23578899999999999


Q ss_pred             hHHHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHH
Q 009648          156 QIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV  231 (530)
Q Consensus       156 sl~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y  231 (530)
                      .+..++++  +|+|+|+|+....  -...+.+.+++|+.||.|++++|.++|+++||++||..+         .+|.+.|
T Consensus       316 ~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA---------V~PtNvm  386 (588)
T COG1086         316 RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA---------VNPTNVM  386 (588)
T ss_pred             HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc---------cCCchHh
Confidence            99999998  9999999996433  334467789999999999999999999999999999876         5677889


Q ss_pred             HHHHHHHHHHHHH-----C--CCCEEEEEcCcccCCCccccc--------ccceeecccCcccCCCCCHHHHHHHHHHHH
Q 009648          232 LLWKRKAEEALIA-----S--GLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       232 ~~sK~~~E~~l~~-----~--gl~~tIvRPg~V~Gp~~~~~~--------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                      |.+|+.+|.++.+     .  +-++++||.|+|.|..+....        +..+.+.. .....-|.+..|.+++++.+.
T Consensus       387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTd-p~mtRyfMTI~EAv~LVlqA~  465 (588)
T COG1086         387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTD-PDMTRFFMTIPEAVQLVLQAG  465 (588)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccC-CCceeEEEEHHHHHHHHHHHH
Confidence            9999999999874     2  378999999999998664311        11111111 111123578899999999998


Q ss_pred             hCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       297 ~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ....  .|++|-+-.++.+++.++++.+-+++|..
T Consensus       466 a~~~--gGeifvldMGepvkI~dLAk~mi~l~g~~  498 (588)
T COG1086         466 AIAK--GGEIFVLDMGEPVKIIDLAKAMIELAGQT  498 (588)
T ss_pred             hhcC--CCcEEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence            8865  69999999999999999999999999843

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.91  E-value=1.8e-23  Score=210.89  Aligned_cols=223  Identities=19%  Similarity=0.112  Sum_probs=153.7

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      ||||||+||||++|++.|+++|++|++++|+..+...+.                     ...+  .|+.. ..+..++.
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------------------~~~~--~~~~~-~~~~~~~~   56 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------------------WEGY--KPWAP-LAESEALE   56 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------------------ceee--ecccc-cchhhhcC
Confidence            699999999999999999999999999999886432210                     0011  12322 44567788


Q ss_pred             CCcEEEEcccCCCCc-cC---CCCcchHhHHHHHHHHHHHHHhcCCC--EEEEEcCCCccCCC-----CccccccchhHH
Q 009648          163 NASVVICCIGASEKE-VF---DITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       163 ~vD~VI~~Ag~~~~~-~~---~~~~~~~vNv~gt~~Ll~aa~~~gv~--r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      ++|+||||||..... ..   .....+++|+.++++|+++|++++++  +||+.|+.+++...     .++....+...|
T Consensus        57 ~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~  136 (292)
T TIGR01777        57 GADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFL  136 (292)
T ss_pred             CCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChH
Confidence            999999999854321 11   12346788999999999999999874  45555654432211     111112222235


Q ss_pred             HHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccc--eee-----cccCcccCCCCCHHHHHHHHHHHHhCCCC
Q 009648          232 LLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHN--ITL-----SQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (530)
Q Consensus       232 ~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~-----~~~~~~~~g~V~v~DVA~ai~~ll~~~~~  301 (530)
                      ...+...|+.+.   +.+++++||||++|||+.+.......  +..     ........++||++|+|++++.+++++. 
T Consensus       137 ~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~-  215 (292)
T TIGR01777       137 AELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS-  215 (292)
T ss_pred             HHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcc-
Confidence            556656665543   46899999999999999653211100  000     1122334478999999999999998765 


Q ss_pred             CCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       302 ~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                       .+++||++++...++.+|.+.+.+++|..
T Consensus       216 -~~g~~~~~~~~~~s~~di~~~i~~~~g~~  244 (292)
T TIGR01777       216 -ISGPVNATAPEPVRNKEFAKALARALHRP  244 (292)
T ss_pred             -cCCceEecCCCccCHHHHHHHHHHHhCCC
Confidence             36799999999999999999999999853

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.91  E-value=4.1e-23  Score=211.48  Aligned_cols=211  Identities=13%  Similarity=0.010  Sum_probs=150.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..|+||||||+||||++|+++|+++|++|++..+                                     |+.|.+.+.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-------------------------------------~~~~~~~v~   50 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-------------------------------------RLENRASLE   50 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-------------------------------------ccCCHHHHH
Confidence            4578999999999999999999999999975422                                     333444444


Q ss_pred             HHhC--CCcEEEEcccCCCCc-----cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----------C
Q 009648          159 PALG--NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------F  220 (530)
Q Consensus       159 ~a~~--~vD~VI~~Ag~~~~~-----~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----------~  220 (530)
                      ..+.  ++|+||||||.....     ..+....+++|+.++.+|+++|++.|++ +|++||..++.++           .
T Consensus        51 ~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~  129 (298)
T PLN02778         51 ADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFK  129 (298)
T ss_pred             HHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCC
Confidence            4444  689999999965321     1344567899999999999999999986 5556665443221           1


Q ss_pred             ccc-cccchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccc--cccceeecccC-cccCCCCCHHHHHHHHHHHH
Q 009648          221 PAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--ETHNITLSQED-TLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       221 ~~~-~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~--~~~~~~~~~~~-~~~~g~V~v~DVA~ai~~ll  296 (530)
                      ++. +..+.+.|+.+|+++|.+++.+. +..++|+++++|.+....  .-..+...... ....++++++|++++++.++
T Consensus       130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l  208 (298)
T PLN02778        130 EEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMA  208 (298)
T ss_pred             cCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHH
Confidence            122 22234689999999999998754 677899988887643211  00111111111 11235899999999999999


Q ss_pred             hCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       297 ~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +++.   +++||++++..+++.++.+++.++++..
T Consensus       209 ~~~~---~g~yNigs~~~iS~~el~~~i~~~~~~~  240 (298)
T PLN02778        209 KRNL---TGIYNFTNPGVVSHNEILEMYRDYIDPS  240 (298)
T ss_pred             hCCC---CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            7653   4799999999999999999999999853

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.90  E-value=5.3e-23  Score=201.90  Aligned_cols=231  Identities=16%  Similarity=0.130  Sum_probs=183.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ...++|+||||.||||+|||+.|..+||+|++++.--.......              +......+++++..|+..    
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~--------------~~~~~~~~fel~~hdv~~----   86 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENL--------------EHWIGHPNFELIRHDVVE----   86 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhc--------------chhccCcceeEEEeechh----
Confidence            45689999999999999999999999999999986543332221              122345788888888754    


Q ss_pred             HHHhCCCcEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc------------c
Q 009648          158 EPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------------A  223 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~------------~  223 (530)
                       .++.++|.|+|+|+...  .-...+...+.+|+.++.+++-.|++.+ +||++.||..+  ||++.            .
T Consensus        87 -pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseV--Ygdp~~hpq~e~ywg~vn  162 (350)
T KOG1429|consen   87 -PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEV--YGDPLVHPQVETYWGNVN  162 (350)
T ss_pred             -HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccc--cCCcccCCCccccccccC
Confidence             47889999999998543  2344566778899999999999999998 69999999988  44332            1


Q ss_pred             cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccc-------------ccccceeecccCcccCCCCCHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY-------------KETHNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~-------------~~~~~~~~~~~~~~~~g~V~v~  286 (530)
                      +..+...|...|+.+|.++.+    .|+.+.|.|+.++|||...+             ..+..+.+..++..-..|..+.
T Consensus       163 pigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvs  242 (350)
T KOG1429|consen  163 PIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVS  242 (350)
T ss_pred             cCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHH
Confidence            245667799999999999864    68999999999999997554             2233455555566666789999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      |+.++++.+++++.   .+.|||++++..|+.++++++.++.+....
T Consensus       243 D~Vegll~Lm~s~~---~~pvNiGnp~e~Tm~elAemv~~~~~~~s~  286 (350)
T KOG1429|consen  243 DLVEGLLRLMESDY---RGPVNIGNPGEFTMLELAEMVKELIGPVSE  286 (350)
T ss_pred             HHHHHHHHHhcCCC---cCCcccCCccceeHHHHHHHHHHHcCCCcc
Confidence            99999999999986   566999999999999999999999855443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.90  E-value=8.3e-23  Score=203.00  Aligned_cols=217  Identities=15%  Similarity=0.090  Sum_probs=158.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+.+.             ..++.++++|+.|.+++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   71 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA-------------GGKAIGVAMDVTNEDAV   71 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc-------------CceEEEEECCCCCHHHH
Confidence            44689999999999999999999999999999999998777766555432             24688899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHH----HHHHHHHH-HhcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQA----TKNLVDAA-TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~g----t~~Ll~aa-~~~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       .+|+||||||.....      ..++...+++|+.+    +.++++++ ++.+.++||++||...... 
T Consensus        72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~-  150 (262)
T PRK13394         72 NAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-  150 (262)
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-
Confidence            77664       489999999964321      12234557799999    66677777 6677889999999755321 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-----ce-------eecccCcccC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-----NI-------TLSQEDTLFG  280 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-----~~-------~~~~~~~~~~  280 (530)
                           ......|+.+|...+.+++.       .++++++||||+++++........     .+       .+..+.....
T Consensus       151 -----~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (262)
T PRK13394        151 -----SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDG  225 (262)
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCC
Confidence                 12345699999998877652       589999999999999853211000     00       0011122335


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+++++|+|+++++++.... ...|+.|++.++.
T Consensus       226 ~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        226 VFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence            68999999999999997653 2347888888774

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=199.93  Aligned_cols=222  Identities=18%  Similarity=0.151  Sum_probs=160.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+++||||||+||||++++++|+++|++|++++|+.. ..+.+...++..             ..++.++.+|++|.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   70 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-------------GGRASAVGADLTDEES   70 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            45689999999999999999999999999999999764 344443333221             1468899999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccccc
Q 009648          157 IEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNL  227 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~  227 (530)
                      +.++++       ++|+||||||.......++...+++|+.++.++++++.+.  ..++||++||.+...... ......
T Consensus        71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~~~  149 (248)
T PRK07806         71 VAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-VKTMPE  149 (248)
T ss_pred             HHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-ccCCcc
Confidence            877663       6899999998644333456677899999999999999864  235999999965432211 011122


Q ss_pred             hhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce--eecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          228 FWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +..|+.+|+++|.+++.       .|+++++|+||.+.++..........  .+.......+.+++++|||++++.++++
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  229 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTA  229 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhc
Confidence            56799999999988764       68999999999887763211000000  0001111234679999999999999997


Q ss_pred             CCCCCCcEEEEeCCCC
Q 009648          299 RSLSYCKVVEVIAETT  314 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~  314 (530)
                      .. ..+++|++.+++.
T Consensus       230 ~~-~~g~~~~i~~~~~  244 (248)
T PRK07806        230 PV-PSGHIEYVGGADY  244 (248)
T ss_pred             cc-cCccEEEecCccc
Confidence            64 5799999999864

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.90  E-value=1.9e-22  Score=198.74  Aligned_cols=219  Identities=15%  Similarity=0.117  Sum_probs=161.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++++||||||+|+||++|+++|+++|++|++++|+..+...+.+.+...             ..++.++.+|+.|.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   69 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA-------------GGKARARQVDVRDRAA   69 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            345789999999999999999999999999999999987666555444322             1458999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       .+|+||||+|....      ...++...+++|+.++.++++++.    +.+.++||++||.+....+
T Consensus        70 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~  149 (251)
T PRK12826         70 LKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG  149 (251)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC
Confidence            888774       68999999986532      112335568899999999988874    4567899999998663111


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                           ......|+.+|..++.+++.       .|+++++||||+++|+......... ............+++++|+|++
T Consensus       150 -----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (251)
T PRK12826        150 -----YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAA  224 (251)
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 23345799999998877653       5899999999999998643322111 0011111223357899999999


Q ss_pred             HHHHHhCCCC-CCCcEEEEeCCC
Q 009648          292 LACMAKNRSL-SYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~~-~~g~vynv~~~~  313 (530)
                      ++.++.+... ..|++|++.++.
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        225 VLFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHHhCccccCcCCcEEEECCCc
Confidence            9998876532 358999998765

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=203.62  Aligned_cols=223  Identities=18%  Similarity=0.165  Sum_probs=157.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .|+||||||+||||++|+++|+++|++|++++|+.+....+.+.+                ..++.++.+|++|.+++.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~   65 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----------------GDRLWVLQLDVTDSAAVRA   65 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCceEEEEccCCCHHHHHH
Confidence            368999999999999999999999999999999987665543210                2468899999999988877


Q ss_pred             Hh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       .++|+||||||.....      ..++...+++|+.++.++++++    ++.+.++||++||.+....    
T Consensus        66 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----  141 (276)
T PRK06482         66 VVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA----  141 (276)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----
Confidence            65       3589999999965322      1223456889999999999997    5567789999999765321    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcc---cCCCcccccccc----eee-----cccCcccCCCC
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGM---ERPTDAYKETHN----ITL-----SQEDTLFGGQV  283 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V---~Gp~~~~~~~~~----~~~-----~~~~~~~~g~V  283 (530)
                        ......|+.+|+++|.+++.       .|+++++||||.+   ||.+........    ...     ........-+.
T Consensus       142 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (276)
T PRK06482        142 --YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPG  219 (276)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCC
Confidence              22356799999999977652       5999999999998   443211100000    000     00000011136


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      +++|++++++.++..+.  .+..||+.++...   .+.+.+.++++
T Consensus       220 d~~~~~~a~~~~~~~~~--~~~~~~~g~~~~~---~~~~~~~~~~~  260 (276)
T PRK06482        220 DPQKMVQAMIASADQTP--APRRLTLGSDAYA---SIRAALSERLA  260 (276)
T ss_pred             CHHHHHHHHHHHHcCCC--CCeEEecChHHHH---HHHHHHHHHHH
Confidence            89999999999998664  3667999988753   44444444433

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.90  E-value=7.2e-23  Score=201.37  Aligned_cols=222  Identities=14%  Similarity=0.132  Sum_probs=163.8

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      |+|||||||||++|+..|.+.||+|++++|++.+......                   ..+.       ..+.+.+...
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------------------~~v~-------~~~~~~~~~~   54 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------------------PNVT-------LWEGLADALT   54 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------------------cccc-------ccchhhhccc
Confidence            6899999999999999999999999999999987665311                   1222       1223444444


Q ss_pred             -CCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc--------ccccchh
Q 009648          163 -NASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA--------AILNLFW  229 (530)
Q Consensus       163 -~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~--------~~~~~~~  229 (530)
                       ++|+|||+||..-.    +....+..++..+..|+.|+++..+..-+.=++||..++..||...        ...+.+.
T Consensus        55 ~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          55 LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             CCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence             79999999996432    2222355688889999999999886654445566666665566332        2244555


Q ss_pred             HHHHHHHHHHHHHH-HCCCCEEEEEcCcccCCCcccccccce--eeccc-----CcccCCCCCHHHHHHHHHHHHhCCCC
Q 009648          230 GVLLWKRKAEEALI-ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQE-----DTLFGGQVSNLQVAELLACMAKNRSL  301 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~-~~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~-----~~~~~g~V~v~DVA~ai~~ll~~~~~  301 (530)
                      .-.+-.|+-|..-. ..|.|++++|.|+|+++.+.....+..  .++.+     +..+..|||++|++++|.++++|.. 
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~-  213 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ-  213 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC-
Confidence            66677777665544 469999999999999987766544432  22222     3344468999999999999999987 


Q ss_pred             CCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       302 ~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                       ..+.||++++.++++.++...+.+++++..
T Consensus       214 -lsGp~N~taP~PV~~~~F~~al~r~l~RP~  243 (297)
T COG1090         214 -LSGPFNLTAPNPVRNKEFAHALGRALHRPA  243 (297)
T ss_pred             -CCCcccccCCCcCcHHHHHHHHHHHhCCCc
Confidence             489999999999999999999999998654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.7e-22  Score=200.64  Aligned_cols=238  Identities=15%  Similarity=0.123  Sum_probs=171.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||+++++.|+++|++|++++|+..+...+.+.+...           ....++.++.+|+.|.+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~~~~~~   73 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEAL-----------KGAGAVRYEPADVTDEDQV   73 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-----------cCCCceEEEEcCCCCHHHH
Confidence            34689999999999999999999999999999999987766655443322           0124788999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....       +..++...+++|+.++.++++++.+    .+.++||++||...... 
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~-  152 (276)
T PRK05875         74 ARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT-  152 (276)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-
Confidence            77764       68999999985321       1122456688999999999887654    34569999999866322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee--ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~--~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|+++|.+++.       .++++++||||++.++...........  ..........+++++|+|+
T Consensus       153 -----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  227 (276)
T PRK05875        153 -----HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVAN  227 (276)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHH
Confidence                 12346799999999988863       579999999999987643221110000  0011112334578999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCCC-ChhHHHHHHHhcCCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETTA-PLTPMEELLAKIPSQRA  332 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~~-t~~~i~ell~~v~g~~~  332 (530)
                      ++.+++.++. ...+++|++.++... ...++.+++..+++..+
T Consensus       228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            9999998754 235899999988764 22578888888886543

>PRK12320 hypothetical protein; Provisional

Probab=99.89  E-value=2.1e-22  Score=224.72  Aligned_cols=199  Identities=18%  Similarity=0.181  Sum_probs=151.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|+++||+|++++|.....                      ...+++++.+|+.|.. +.++
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------------------~~~~ve~v~~Dl~d~~-l~~a   57 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------------------LDPRVDYVCASLRNPV-LQEL   57 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------------------ccCCceEEEccCCCHH-HHHH
Confidence            4799999999999999999999999999999875321                      0146899999999985 7888


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      +.++|+|||+|+....      ....+|+.++.||+++|++.|+ +|||+||...    .+.       .|.    .+|.
T Consensus        58 l~~~D~VIHLAa~~~~------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G----~~~-------~~~----~aE~  115 (699)
T PRK12320         58 AGEADAVIHLAPVDTS------APGGVGITGLAHVANAAARAGA-RLLFVSQAAG----RPE-------LYR----QAET  115 (699)
T ss_pred             hcCCCEEEEcCccCcc------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCC----CCc-------ccc----HHHH
Confidence            8999999999985321      1236899999999999999998 7999998632    111       122    4788


Q ss_pred             HHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCC---CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCCh
Q 009648          241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG---QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g---~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~  317 (530)
                      ++...+++++|+|++++||++........+.........+.   .||++|++++++.+++.+.   +++|||++++..++
T Consensus       116 ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~---~GiyNIG~~~~~Si  192 (699)
T PRK12320        116 LVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR---NGVVDLATPDTTNV  192 (699)
T ss_pred             HHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC---CCEEEEeCCCeeEH
Confidence            88888899999999999999643211111110001111122   3699999999999998643   45999999999999


Q ss_pred             hHHHHHHHhc
Q 009648          318 TPMEELLAKI  327 (530)
Q Consensus       318 ~~i~ell~~v  327 (530)
                      .++.+++..+
T Consensus       193 ~el~~~i~~~  202 (699)
T PRK12320        193 VTAWRLLRSV  202 (699)
T ss_pred             HHHHHHHHHh
Confidence            9988888776

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.5e-22  Score=194.44  Aligned_cols=218  Identities=18%  Similarity=0.194  Sum_probs=157.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH-HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++++||||||+|+||++|+++|+++|++|+++.|+..+. +.+.+.+...             ..+++++.+|+.|.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   70 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-------------GRRAQAVQADVTDKAA   70 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-------------CCceEEEECCcCCHHH
Confidence            3457999999999999999999999999998888876532 2222222211             2568999999999998


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.+++       +++|+||||||.....      ..++...+++|+.+..++++.+    ++.++++||++||.+.... 
T Consensus        71 v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~-  149 (249)
T PRK12825         71 LEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG-  149 (249)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC-
Confidence            87776       3679999999954322      1223556889999999998887    4567889999999876422 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|...+.+++       ..|+++++||||+++|+...................+.+++.+|+++++
T Consensus       150 -----~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  224 (249)
T PRK12825        150 -----WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAV  224 (249)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHH
Confidence                 2235679999998886664       2689999999999999864321111111100012334579999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      .+++.+.. ...|++|++.++..
T Consensus       225 ~~~~~~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        225 AFLCSDASDYITGQVIEVTGGVD  247 (249)
T ss_pred             HHHhCccccCcCCCEEEeCCCEe
Confidence            99997653 24689999998753

>PRK09135 pteridine reductase; Provisional

Probab=99.89  E-value=5.8e-22  Score=195.05  Aligned_cols=220  Identities=13%  Similarity=0.140  Sum_probs=155.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+||||++++++|+++|++|++++|+. .+...+...+...            ....+.++.+|++|.++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~   71 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL------------RPGSAAALQADLLDPDA   71 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh------------cCCceEEEEcCCCCHHH
Confidence            4557899999999999999999999999999999964 3344333322211            11468899999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      +..+++       ++|+||||||....      ...++...+++|+.++.+|++++...   ..++++++++.....   
T Consensus        72 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---  148 (249)
T PRK09135         72 LPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER---  148 (249)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC---
Confidence            887774       57999999995322      12234567889999999999998642   234677777643321   


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ...+...|+.+|..+|.+++.      .+++++++|||+++|+.+......... ............+++|+|++++
T Consensus       149 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  225 (249)
T PRK09135        149 ---PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVR  225 (249)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence               245567899999999988863      369999999999999875321111100 0001112233457999999998


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +++.+.....|++||+.++...
T Consensus       226 ~~~~~~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        226 FLLADASFITGQILAVDGGRSL  247 (249)
T ss_pred             HHcCccccccCcEEEECCCeec
Confidence            7776544357899999998653

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.89  E-value=3.6e-22  Score=197.73  Aligned_cols=217  Identities=12%  Similarity=0.016  Sum_probs=156.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||++++++|+++|++|++++|+.++...+.+.+...             ..+++++.+|+.|.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   68 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-------------GGKAIGVAMDVTDEEAI   68 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            34679999999999999999999999999999999988777665544322             25788999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHH----HHHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATK----NLVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~----~Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||.....      ..++...+++|+.++.    .+++++++.+.++||++||......  
T Consensus        69 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~--  146 (258)
T PRK12429         69 NAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG--  146 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC--
Confidence            77764       689999999854321      1123345778888844    4555555667889999999755322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-----ccee-------ecccCcccCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNIT-------LSQEDTLFGG  281 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-----~~~~-------~~~~~~~~~g  281 (530)
                          ......|+.+|++.+.+.+       ..++++++||||+++++.......     ..+.       ........+.
T Consensus       147 ----~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (258)
T PRK12429        147 ----SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKR  222 (258)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccc
Confidence                2345679999998886664       258999999999999875321100     0000       0011112346


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++|+|+++++++.+.. ...++.|++.++.
T Consensus       223 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        223 FTTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             cCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence            7999999999999997643 2357889988774

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.89  E-value=1.2e-21  Score=193.80  Aligned_cols=215  Identities=15%  Similarity=0.064  Sum_probs=154.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++||||||+|+||++|++.|+++|++|++++|+..+.+.+.+.+...             ..++.++.+|+.|.+++..+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~   68 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-------------GGSVIYLVADVTKEDEIADM   68 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHHHHHHH
Confidence            58999999999999999999999999999999987766665443321             24688999999999865544


Q ss_pred             -------hCCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCccc
Q 009648          161 -------LGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       161 -------~~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                             +.++|+||||+|.....      ..++...+++|+.++..+++++    ++.++++||++||.+....     
T Consensus        69 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~-----  143 (255)
T TIGR01963        69 IAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA-----  143 (255)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC-----
Confidence                   45689999999864321      1123445778999988877776    5567889999999754322     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----cceee-------cccCcccCCCCC
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNITL-------SQEDTLFGGQVS  284 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~~~~~-------~~~~~~~~g~V~  284 (530)
                       ......|+.+|...+.+++.       .++++++||||+++++.......     .....       .........+++
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVT  222 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcC
Confidence             12245699999988877652       58999999999999885321100     00000       001112335799


Q ss_pred             HHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++|+|++++.++.+.. ...+++|++.++..
T Consensus       223 ~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       223 VDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            9999999999998642 23578999988754

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.88  E-value=1.6e-22  Score=198.59  Aligned_cols=234  Identities=14%  Similarity=0.140  Sum_probs=181.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++|+||||+||||++.++.++..  .++.+.++.=.  ..+..+.               .....++..|+++|+.|...
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~---------------~~~n~p~ykfv~~di~~~~~   71 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLE---------------PVRNSPNYKFVEGDIADADL   71 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhh---------------hhccCCCceEeeccccchHH
Confidence            78999999999999999999987  45665555311  1122211               12345899999999999888


Q ss_pred             HHHHh--CCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCC------ccccc
Q 009648          157 IEPAL--GNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF------PAAIL  225 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~------~~~~~  225 (530)
                      +...|  ..+|.|||.|+....  ..-+.......|+.++..|+++++.. ++++|||+||..++....      +....
T Consensus        72 ~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~  151 (331)
T KOG0747|consen   72 VLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLL  151 (331)
T ss_pred             HHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccC
Confidence            87777  469999999986533  22334556788999999999999987 789999999988743322      23457


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecccCcccCCCCCHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      +|..+|+++|+++|..++.    +|++++++|-++||||+.....           .....+.+.+.....++|++|+++
T Consensus       152 nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e  231 (331)
T KOG0747|consen  152 NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE  231 (331)
T ss_pred             CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence            8889999999999999975    7899999999999999875421           122233344455557899999999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++..+++.+.  .|++|||+........++++.+.++++..
T Consensus       232 a~~~v~~Kg~--~geIYNIgtd~e~~~~~l~k~i~eli~~~  270 (331)
T KOG0747|consen  232 AFKAVLEKGE--LGEIYNIGTDDEMRVIDLAKDICELFEKR  270 (331)
T ss_pred             HHHHHHhcCC--ccceeeccCcchhhHHHHHHHHHHHHHHh
Confidence            9999999865  59999999999999999999999888764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-21  Score=194.80  Aligned_cols=219  Identities=14%  Similarity=0.097  Sum_probs=160.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-------------~~~~~~~~~D~~~~~~   73 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ-------------GLSAHALAFDVTDHDA   73 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------CceEEEEEccCCCHHH
Confidence            356789999999999999999999999999999999988776655544321             1458889999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       .+|+||||+|.....      ..++...+++|+.++.++++++.+    .+.++||++||...... 
T Consensus        74 ~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-  152 (255)
T PRK07523         74 VRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-  152 (255)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-
Confidence            887774       579999999864321      122345678999999999988774    36679999999755321 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-cccee-ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                           ...+..|+.+|...+.+++       ..|+++++||||++.++...... ...+. ........+.+..++|||+
T Consensus       153 -----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  227 (255)
T PRK07523        153 -----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVG  227 (255)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 2235679999999988765       36899999999999987532111 00000 0011122345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++++.++. ...|+++++.++..
T Consensus       228 ~~~~l~~~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        228 ACVFLASDASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             HHHHHcCchhcCccCcEEEECCCee
Confidence            9999997643 23578898887753

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=1.8e-21  Score=192.36  Aligned_cols=216  Identities=16%  Similarity=0.153  Sum_probs=156.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEE-EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~-~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++||||||+|+||+++++.|+++|++|++ ..|+..+.+.+.+.++..             ..++.++.+|+.|.+++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   69 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL-------------GRKALAVKANVGDVEKI   69 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHHHH
Confidence            4579999999999999999999999999887 578877666655544432             25688999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      ..+++       ++|+||||||......      .++...+++|+.++.++++++.+    .+.++||++||.+....  
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--  147 (250)
T PRK08063         70 KEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY--  147 (250)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC--
Confidence            77774       5899999998643211      11234578999999998888764    45679999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-ccee-ecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~-~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|+++|.+++.       .|+++++|+||++.++....... ..+. ........+..++++|+|++
T Consensus       148 ----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  223 (250)
T PRK08063        148 ----LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANA  223 (250)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHH
Confidence                23456799999999988752       68999999999998765321111 0110 00111223457999999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.++. ...|++|++.++.
T Consensus       224 ~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        224 VLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HHHHcCchhcCccCCEEEECCCe
Confidence            999997653 2358888888764

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.6e-21  Score=195.19  Aligned_cols=200  Identities=14%  Similarity=0.119  Sum_probs=145.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++||||||+|+||++|++.|+++|++|++++|+.++...+.+.                ...++.++.+|+.|.+++.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----------------~~~~~~~~~~D~~d~~~~~   66 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----------------HPDRALARLLDVTDFDAID   66 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----------------cCCCeeEEEccCCCHHHHH
Confidence            467899999999999999999999999999999998766554321                1246888999999998887


Q ss_pred             HHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       ++|+||||||......      .++...+++|+.++.++++++.    +.+.++||++||.+....   
T Consensus        67 ~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~---  143 (277)
T PRK06180         67 AVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT---  143 (277)
T ss_pred             HHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC---
Confidence            7664       5899999999643211      1234558999999999999853    456679999999765332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc---cee-----e-----cccCcccCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH---NIT-----L-----SQEDTLFGG  281 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~---~~~-----~-----~~~~~~~~g  281 (530)
                         ..+...|+.+|...|.+++.       .|+++++||||++.++........   .+.     .     .........
T Consensus       144 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (277)
T PRK06180        144 ---MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQ  220 (277)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCC
Confidence               22456799999998877652       599999999999987642210000   000     0     000011123


Q ss_pred             CCCHHHHHHHHHHHHhCCC
Q 009648          282 QVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~  300 (530)
                      +++++|+|++++++++++.
T Consensus       221 ~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        221 PGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             CCCHHHHHHHHHHHHcCCC
Confidence            5789999999999998875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-21  Score=195.02  Aligned_cols=216  Identities=14%  Similarity=0.111  Sum_probs=158.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+                ..++.++.+|+.|.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   66 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----------------GPAAIAVSLDVTRQDS   66 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----------------CCceEEEEccCCCHHH
Confidence            355689999999999999999999999999999999987766554321                1358899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc-----CCCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r~V~iSS~~v~~~  218 (530)
                      +..+++       .+|+||||||....      ...++...+++|+.++.++++++...     ..++||++||..... 
T Consensus        67 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-  145 (257)
T PRK07067         67 IDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR-  145 (257)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC-
Confidence            877664       58999999986422      12335566899999999999998643     125899999975422 


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc---c-c-ce------eecccCcccC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---T-H-NI------TLSQEDTLFG  280 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~---~-~-~~------~~~~~~~~~~  280 (530)
                      +     ..+...|+.+|.+.+.+++       ..|+++++||||+|+++......   . . ..      .........+
T Consensus       146 ~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T PRK07067        146 G-----EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLG  220 (257)
T ss_pred             C-----CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCC
Confidence            1     1245679999999887765       26899999999999997432110   0 0 00      0011122345


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      .+++.+|||+++++++.+.. ...|++|++.++..
T Consensus       221 ~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        221 RMGVPDDLTGMALFLASADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             CccCHHHHHHHHHHHhCcccccccCcEEeecCCEe
Confidence            67899999999999998653 24589999988753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-21  Score=192.15  Aligned_cols=216  Identities=17%  Similarity=0.168  Sum_probs=154.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++++|+||||+|+||++++++|+++|++|+++ .|+..+...+.+.+...             ..+++++.+|+.|.++
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~   70 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-------------GGKAFLIEADLNSIDG   70 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCcCCHHH
Confidence            346899999999999999999999999999885 57766555544333211             2468899999999998


Q ss_pred             HHHHhC-------------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          157 IEPALG-------------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       157 l~~a~~-------------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      +.++++             ++|+||||||......      ..+...+++|+.++.++++++.+.  +.++||++||..+
T Consensus        71 i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~  150 (254)
T PRK12746         71 VKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV  150 (254)
T ss_pred             HHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh
Confidence            877664             5899999998643211      112455779999999999998763  4468999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc-e-eecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-I-TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~-~-~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|.+.+.+++       ..|+++++|+||+++++......... + ........++.+++++
T Consensus       151 ~~~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (254)
T PRK12746        151 RLG------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE  224 (254)
T ss_pred             cCC------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH
Confidence            321      2334569999999987754       26899999999999887532111100 0 1111223345567999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |||+++++++.+.. ...|++|++.++
T Consensus       225 dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        225 DIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            99999999887653 235789999766

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.9e-21  Score=195.91  Aligned_cols=224  Identities=18%  Similarity=0.133  Sum_probs=156.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||++++++|+++|++|++++|+.++...+.+.+                ..++.++.+|+.|.+++..
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~   66 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----------------GDRLLPLALDVTDRAAVFA   66 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------------cCCeeEEEccCCCHHHHHH
Confidence            578999999999999999999999999999999987665543211                1468889999999988776


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       .++|+||||||....      ...++...+++|+.++.++++++    ++.+.++||++||.+.....   
T Consensus        67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---  143 (275)
T PRK08263         67 AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF---  143 (275)
T ss_pred             HHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC---
Confidence            65       367999999996532      12234566889999988877775    55677899999997653321   


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc--ccee----e---cccCcccCCC-CCH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNIT----L---SQEDTLFGGQ-VSN  285 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~--~~~~----~---~~~~~~~~g~-V~v  285 (530)
                         .....|+.+|+..+.+++       ..|+++++||||++.++.......  ....    +   .........+ +++
T Consensus       144 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  220 (275)
T PRK08263        144 ---PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDP  220 (275)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCH
Confidence               224569999999887664       268999999999998764321000  0000    0   0000112234 789


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHh
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK  326 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~  326 (530)
                      +|+|++++.+++.+. ..++.|+..+....++.++.+.+.+
T Consensus       221 ~dva~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  260 (275)
T PRK08263        221 EAAAEALLKLVDAEN-PPLRLFLGSGVLDLAKADYERRLAT  260 (275)
T ss_pred             HHHHHHHHHHHcCCC-CCeEEEeCchHHHHHHHHHHHHHHH
Confidence            999999999999875 3345454444444455555555554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=1.8e-21  Score=190.78  Aligned_cols=217  Identities=16%  Similarity=0.115  Sum_probs=156.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||++|++.|+++|++|++++|+..+...+...+...             ..++.++.+|+.|.+++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   69 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA-------------GGEARVLVFDVSDEAAV   69 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-------------CCceEEEEccCCCHHHH
Confidence            44579999999999999999999999999999999987766555444322             25688999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       .+|+|||++|......      .++...+++|+.+..++++++.    +.++++||++||.+....  
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~--  147 (246)
T PRK05653         70 RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG--  147 (246)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC--
Confidence            77664       4699999998643321      1234457899999999888874    557789999999755321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|...+.+++.       .++++++||||.++++.....................+++.+|+|++++
T Consensus       148 ----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  223 (246)
T PRK05653        148 ----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVA  223 (246)
T ss_pred             ----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                23346699999987766542       5899999999999998653211000000001111245688999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.... ...+++|++.++.
T Consensus       224 ~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        224 FLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HHcCchhcCccCCEEEeCCCe
Confidence            9987532 2358899988874

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.88  E-value=1.1e-21  Score=193.01  Aligned_cols=218  Identities=28%  Similarity=0.337  Sum_probs=157.5

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      |+|+||||.+|+++++.|++.|++|++++|+..+..  .+.++.               .+++++.+|+.|.+++.++|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~---------------~g~~vv~~d~~~~~~l~~al~   63 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQA---------------LGAEVVEADYDDPESLVAALK   63 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHH---------------TTTEEEES-TT-HHHHHHHHT
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhc---------------ccceEeecccCCHHHHHHHHc
Confidence            799999999999999999999999999999984322  111221               467889999999999999999


Q ss_pred             CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHH
Q 009648          163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL  242 (530)
Q Consensus       163 ~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l  242 (530)
                      |+|+||++.+...          ........+++++|+++|++|||+ |+.+....  ......+...+...|..+|+++
T Consensus        64 g~d~v~~~~~~~~----------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~--~~~~~~p~~~~~~~k~~ie~~l  130 (233)
T PF05368_consen   64 GVDAVFSVTPPSH----------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYD--ESSGSEPEIPHFDQKAEIEEYL  130 (233)
T ss_dssp             TCSEEEEESSCSC----------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTT--TTTTSTTHHHHHHHHHHHHHHH
T ss_pred             CCceEEeecCcch----------hhhhhhhhhHHHhhhccccceEEE-EEeccccc--ccccccccchhhhhhhhhhhhh
Confidence            9999999987543          123667899999999999999996 55544221  1111122344567899999999


Q ss_pred             HHCCCCEEEEEcCcccCCCcc-------ccccc-ceeecccCcccCCC-CCHHHHHHHHHHHHhCCCCC-CCcEEEEeCC
Q 009648          243 IASGLPYTIVRPGGMERPTDA-------YKETH-NITLSQEDTLFGGQ-VSNLQVAELLACMAKNRSLS-YCKVVEVIAE  312 (530)
Q Consensus       243 ~~~gl~~tIvRPg~V~Gp~~~-------~~~~~-~~~~~~~~~~~~g~-V~v~DVA~ai~~ll~~~~~~-~g~vynv~~~  312 (530)
                      ++.+++|++||+|+++.....       ..... .+.+.........+ ++.+|+|++++.+|.++... .++.|.+.+ 
T Consensus       131 ~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-  209 (233)
T PF05368_consen  131 RESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-  209 (233)
T ss_dssp             HHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-
T ss_pred             hhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-
Confidence            999999999999988643211       11111 12222222211223 59999999999999997644 478888877 


Q ss_pred             CCCChhHHHHHHHhcCCCC
Q 009648          313 TTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       313 ~~~t~~~i~ell~~v~g~~  331 (530)
                      +.+++.++++++++++|+.
T Consensus       210 ~~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  210 ETLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             GEEEHHHHHHHHHHHHTSE
T ss_pred             CCCCHHHHHHHHHHHHCCc
Confidence            5589999999999999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.88  E-value=3.8e-22  Score=198.97  Aligned_cols=171  Identities=25%  Similarity=0.287  Sum_probs=107.3

Q ss_pred             EECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHH---HHHHHhhhhccccccCCCCCCCeEEEEecCCCH-----
Q 009648           85 VAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLV---QSVKQMKLDGELANKGIQPVEMLELVECDLEKR-----  154 (530)
Q Consensus        85 VTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~---~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-----  154 (530)
                      |||||||||++|+++|++++.  +|++++|..+......   +.+.+..++...   -.....+++++.||+.++     
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~---~~~~~~ri~~v~GDl~~~~lGL~   77 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDL---DKEALSRIEVVEGDLSQPNLGLS   77 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH----HHHTTTEEEEE--TTSGGGG--
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhh---hhhhhccEEEEeccccccccCCC
Confidence            799999999999999999986  9999999875433322   222222222110   001147999999999974     


Q ss_pred             -hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc-----------
Q 009648          155 -VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA-----------  222 (530)
Q Consensus       155 -~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~-----------  222 (530)
                       +.+..+.+.+|+|||||+...... .....+++|+.|+++|++.|.+.+.++|+|+||..+.......           
T Consensus        78 ~~~~~~L~~~v~~IiH~Aa~v~~~~-~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~  156 (249)
T PF07993_consen   78 DEDYQELAEEVDVIIHCAASVNFNA-PYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred             hHHhhccccccceeeecchhhhhcc-cchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence             456777789999999999765443 5566899999999999999997777799999994332221100           


Q ss_pred             ---ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccC
Q 009648          223 ---AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER  259 (530)
Q Consensus       223 ---~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~G  259 (530)
                         .......+|.++||.+|+++++    .|++++|+|||.|+|
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG  200 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence               1123445899999999999985    399999999999999

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.3e-21  Score=190.39  Aligned_cols=215  Identities=11%  Similarity=0.020  Sum_probs=156.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+......+.+.+...             ..++.++.+|++|.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   70 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-------------GGTAIAVQVDVSDPDSA   70 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            45689999999999999999999999999999999987666555443321             14678899999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC---------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccC
Q 009648          158 EPALG-------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~---------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~  217 (530)
                      +.+++       .+|+||||||....         +..++...+++|+.++.++++++...    +.++||++||.++..
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (250)
T PRK07774         71 KAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL  150 (250)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence            76553       68999999996421         11223456889999999998887743    467999999986632


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                               +...|+.+|++.|.+++.       .|+++++++||.+.++.........+. ..........+.+++|+|
T Consensus       151 ---------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  221 (250)
T PRK07774        151 ---------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLV  221 (250)
T ss_pred             ---------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                     235699999999988763       479999999999987754321100000 001111122356899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++.++.+.. ...+++|++.++..
T Consensus       222 ~~~~~~~~~~~~~~~g~~~~v~~g~~  247 (250)
T PRK07774        222 GMCLFLLSDEASWITGQIFNVDGGQI  247 (250)
T ss_pred             HHHHHHhChhhhCcCCCEEEECCCee
Confidence            99999987642 24688999998754

>PRK06182 short chain dehydrogenase; Validated

Probab=99.87  E-value=6.3e-21  Score=191.76  Aligned_cols=207  Identities=17%  Similarity=0.203  Sum_probs=147.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++++.+..                   .+++++.+|+.|.+++.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------------------~~~~~~~~Dv~~~~~~~   62 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------------------LGVHPLSLDVTDEASIK   62 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHH
Confidence            35789999999999999999999999999999999876654321                   35789999999999888


Q ss_pred             HHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHH----HHHHHHHHhcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQAT----KNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt----~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       ++|+||||||....      +..++...+++|+.++    +.+++.+++.+.++||++||.+.....  
T Consensus        63 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~--  140 (273)
T PRK06182         63 AAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT--  140 (273)
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC--
Confidence            7774       78999999996432      1223456688999885    455556677777899999997653221  


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccccee-e---------------cccCcc
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-L---------------SQEDTL  278 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~---------------~~~~~~  278 (530)
                          .....|+.+|.+.+.+++       ..|+++++||||+|.++........... .               ......
T Consensus       141 ----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (273)
T PRK06182        141 ----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG  216 (273)
T ss_pred             ----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc
Confidence                122459999999987753       3689999999999998753211100000 0               000011


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      .+.+.+.+|+|+++++++....  ....|++..+
T Consensus       217 ~~~~~~~~~vA~~i~~~~~~~~--~~~~~~~g~~  248 (273)
T PRK06182        217 SGRLSDPSVIADAISKAVTARR--PKTRYAVGFG  248 (273)
T ss_pred             cccCCCHHHHHHHHHHHHhCCC--CCceeecCcc
Confidence            2245789999999999998653  2445655443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.6e-21  Score=191.34  Aligned_cols=225  Identities=17%  Similarity=0.101  Sum_probs=162.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+.               ..+++++.+|+.|.+++..
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~~~~   66 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---------------DARFVPVACDLTDAASLAA   66 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence            4689999999999999999999999999999999877665543221               1468899999999998877


Q ss_pred             HhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          160 ALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++.       ++|+||||+|......      .++...+++|+.++.++++++.    +.+.++||++||.......   
T Consensus        67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  143 (257)
T PRK07074         67 ALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL---  143 (257)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC---
Confidence            764       5899999998643211      1123346789999988888874    4566799999996442111   


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--ccceee-cccCcccCCCCCHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNITL-SQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~~~~~~-~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ....|+.+|++.+.+++.       .|++++++|||+++++......  ...+.. .........+++++|+++++
T Consensus       144 ----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  219 (257)
T PRK07074        144 ----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAV  219 (257)
T ss_pred             ----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                123699999998877763       5899999999999987532211  010100 00112235679999999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHh
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAK  326 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~  326 (530)
                      +.++.+. ....|.++++.++......+|.+.+.+
T Consensus       220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999753 223588889998888777887776654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.87  E-value=3e-21  Score=187.92  Aligned_cols=201  Identities=18%  Similarity=0.181  Sum_probs=150.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|.|+||||+++||.++++.|++.|++|+++.|+.++++++..++.+               ..+..+..|++|.+++
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---------------~~~~~~~~DVtD~~~~   68 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------------GAALALALDVTDRAAV   68 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---------------CceEEEeeccCCHHHH
Confidence            4568999999999999999999999999999999999999998775431               4688899999999885


Q ss_pred             HHHh-------CCCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ..++       +.+|++|||||...      .+..+|..++++|+.|..++.++    +.+++.++||++||++..... 
T Consensus        69 ~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y-  147 (246)
T COG4221          69 EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY-  147 (246)
T ss_pred             HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC-
Confidence            5554       57899999999542      34456788999999998877766    456677799999998764332 


Q ss_pred             ccccccchhHHHHHHHHHHHHHH---H----CCCCEEEEEcCcccCCCcccccccceeecccCc--ccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI---A----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT--LFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~---~----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~--~~~g~V~v~DVA~a  291 (530)
                           .....|+.+|+++.++..   .    .++|++.|-||.|.+.......... .......  .....+..+|||++
T Consensus       148 -----~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~  221 (246)
T COG4221         148 -----PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEA  221 (246)
T ss_pred             -----CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHH
Confidence                 223469999999876643   2    7899999999999653211100000 0000111  12235899999999


Q ss_pred             HHHHHhCCC
Q 009648          292 LACMAKNRS  300 (530)
Q Consensus       292 i~~ll~~~~  300 (530)
                      |++++..+.
T Consensus       222 V~~~~~~P~  230 (246)
T COG4221         222 VLFAATQPQ  230 (246)
T ss_pred             HHHHHhCCC
Confidence            999999886

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.87  E-value=4.7e-21  Score=189.11  Aligned_cols=215  Identities=14%  Similarity=0.106  Sum_probs=156.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+|+||++++++|+++|++|++++|+.++...+.+.+.+.             ..+++++.+|+.|.++++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~   68 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-------------GGNAQAFACDITDRDSVD   68 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHHH
Confidence            4678999999999999999999999999999999988777665544322             256899999999998888


Q ss_pred             HHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       ++|+||||+|....      ...++...+++|+.++.++++++.    +.+.++||++||.+....   
T Consensus        69 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~---  145 (250)
T TIGR03206        69 TAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVG---  145 (250)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccC---
Confidence            7764       58999999985322      112234568899999999888765    456789999999866322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc----cc-e-eecccCcccCCCCCHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----HN-I-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~----~~-~-~~~~~~~~~~g~V~v~DV  288 (530)
                         ......|+.+|++.+.+++.       .+++++++|||+++++.......    .. + .........+....++||
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  222 (250)
T TIGR03206       146 ---SSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDL  222 (250)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHH
Confidence               12345799999888766652       48999999999999874221100    00 0 000111223345789999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |+++.+++.+.. ...|+++++.++
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       223 PGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             HHHHHHHcCcccCCCcCcEEEeCCC
Confidence            999999987653 235789988776

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.87  E-value=4.9e-21  Score=189.04  Aligned_cols=217  Identities=13%  Similarity=0.054  Sum_probs=154.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+++||||||+|+||++++++|+++|++|+++.|+ ....+.+.+.+.+.             ..++.++.+|+.|.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   70 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE-------------GHDVYAVQADVSKVED   70 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            456899999999999999999999999999886653 44444443333221             1468999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       .+|+||||||.....      ..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-  149 (247)
T PRK12935         71 ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG-  149 (247)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC-
Confidence            887774       379999999964321      123456689999999999988864    34569999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ...+..|+.+|.+.+.+++.       .|+++++++||++.++.....................+++++|+++++
T Consensus       150 -----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  224 (247)
T PRK12935        150 -----GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGV  224 (247)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHH
Confidence                 12345799999988877542       589999999999987632111000000000112234578999999999


Q ss_pred             HHHHhCCCCCCCcEEEEeCCC
Q 009648          293 ACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~~~~g~vynv~~~~  313 (530)
                      ++++.......+++||+.++.
T Consensus       225 ~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        225 VYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHcCcccCccCCEEEeCCCc
Confidence            999976544568999998873

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=5.9e-21  Score=188.30  Aligned_cols=215  Identities=14%  Similarity=0.077  Sum_probs=154.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+..+...+...+..              ..++.++.+|+.|.+++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~   68 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--------------GGRAIAVAADVSDEADV   68 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------CCeEEEEECCCCCHHHH
Confidence            4567999999999999999999999999999999998776665443321              14688999999999998


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ..+++       ++|+||||+|....       +..++...+++|+.++.++++.+.    +.+.++||++||.+.... 
T Consensus        69 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-  147 (251)
T PRK07231         69 EAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP-  147 (251)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-
Confidence            87764       57999999986321       112345568899988777776655    467789999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc---c-eeecccCcccCCCCCHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH---N-ITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~---~-~~~~~~~~~~~g~V~v~DV  288 (530)
                           ......|+.+|...+.+++.       .++++++||||++.++........   . ..........+.+++++|+
T Consensus       148 -----~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  222 (251)
T PRK07231        148 -----RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDI  222 (251)
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHH
Confidence                 23456799999998877652       489999999999977642211110   0 0000111223456899999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |+++++++.+.. ...|..+.+.++
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        223 ANAALFLASDEASWITGVTLVVDGG  247 (251)
T ss_pred             HHHHHHHhCccccCCCCCeEEECCC
Confidence            999999997653 224666777655

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.87  E-value=5.8e-21  Score=210.95  Aligned_cols=253  Identities=13%  Similarity=0.100  Sum_probs=171.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhcccc-----ccC----CCCCCCeE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELA-----NKG----IQPVEMLE  145 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~-----~~g----~~~~~~v~  145 (530)
                      ..+++|||||||||||++|++.|++.+.   +|++++|........ +++.+..++...+     ..|    .+...+++
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~-eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAI-ERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHH-HHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            4679999999999999999999998764   789999976432221 1121000000000     001    11246899


Q ss_pred             EEEecCCCH------hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCC
Q 009648          146 LVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       146 ~v~~Dl~d~------~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~  218 (530)
                      ++.+|+.++      +.++.+.+++|+|||+|+..... .+....+++|+.++.+|+++|++. ++++|||+||..++..
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~  274 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ  274 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence            999999986      45666778899999999976532 345667899999999999999886 5789999999755322


Q ss_pred             CC---cccc-------------------------------------c-----------------------cchhHHHHHH
Q 009648          219 GF---PAAI-------------------------------------L-----------------------NLFWGVLLWK  235 (530)
Q Consensus       219 ~~---~~~~-------------------------------------~-----------------------~~~~~Y~~sK  235 (530)
                      ..   .+.+                                     .                       .-...|..+|
T Consensus       275 ~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK  354 (605)
T PLN02503        275 RQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTK  354 (605)
T ss_pred             CCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHH
Confidence            10   0000                                     0                       0013599999


Q ss_pred             HHHHHHHHH--CCCCEEEEEcCcc----------cCCCcccccccceeecc--------cCcccCCCCCHHHHHHHHHHH
Q 009648          236 RKAEEALIA--SGLPYTIVRPGGM----------ERPTDAYKETHNITLSQ--------EDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       236 ~~~E~~l~~--~gl~~tIvRPg~V----------~Gp~~~~~~~~~~~~~~--------~~~~~~g~V~v~DVA~ai~~l  295 (530)
                      +.+|+++++  .+++++||||++|          +++++.......+..+.        +.....+.|++|.|+++++.+
T Consensus       355 ~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a  434 (605)
T PLN02503        355 AMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAA  434 (605)
T ss_pred             HHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHH
Confidence            999999986  4799999999999          33332111111111111        122233569999999999888


Q ss_pred             HhC-CC--CCCCcEEEEeCC--CCCChhHHHHHHHhcCCCCC
Q 009648          296 AKN-RS--LSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       296 l~~-~~--~~~g~vynv~~~--~~~t~~~i~ell~~v~g~~~  332 (530)
                      +.. ..  ...+.+||++++  +..++.++.+++.+.+...+
T Consensus       435 ~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P  476 (605)
T PLN02503        435 MAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP  476 (605)
T ss_pred             HHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence            432 11  124789999988  88899999999998777654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.1e-21  Score=193.47  Aligned_cols=218  Identities=17%  Similarity=0.176  Sum_probs=155.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+...           ....+++++.+|+.|.+++.
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~d~~~~~   70 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL-----------NLQQNIKVQQLDVTDQNSIH   70 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-----------CCCCceeEEecCCCCHHHHH
Confidence            3578999999999999999999999999999999987776665443322           11247899999999988776


Q ss_pred             H------HhCCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcc
Q 009648          159 P------ALGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       159 ~------a~~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      .      .++.+|+||||||.....      ..++...+++|+.++.++++++    ++.+.++||++||.+....    
T Consensus        71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----  146 (280)
T PRK06914         71 NFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG----  146 (280)
T ss_pred             HHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC----
Confidence            5      124679999999864321      1223455789999988888775    5667789999999754222    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccceeec--------------ccCcccC
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLS--------------QEDTLFG  280 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~~~--------------~~~~~~~  280 (530)
                        ..+...|+.+|...+.+++.       .|+++++||||.++++...... .......              .......
T Consensus       147 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (280)
T PRK06914        147 --FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD  224 (280)
T ss_pred             --CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence              23356799999998877653       5899999999999887422100 0000000              0001123


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      .+++++|+|++++++++++..  ...|+++++...
T Consensus       225 ~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~~~  257 (280)
T PRK06914        225 TFGNPIDVANLIVEIAESKRP--KLRYPIGKGVKL  257 (280)
T ss_pred             ccCCHHHHHHHHHHHHcCCCC--CcccccCCchHH
Confidence            468999999999999998863  457888876543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=190.15  Aligned_cols=213  Identities=19%  Similarity=0.180  Sum_probs=152.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+..+...+.+.+...             ..+++++.+|++|.+++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   74 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD-------------GGEAVAFPLDVTDPDSV   74 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHHH
Confidence            44579999999999999999999999999999999877665554433321             14688899999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       .+|+||||||......      .++...+++|+.++.++++++.    +.+.++||++||....... 
T Consensus        75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-  153 (274)
T PRK07775         75 KSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-  153 (274)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-
Confidence            77664       6799999998643211      1234457899999999988865    3456789999997653221 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce--eec----ccCcccCCCCCHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI--TLS----QEDTLFGGQVSNLQ  287 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~----~~~~~~~g~V~v~D  287 (530)
                           .....|+.+|++.|.+++.       .|+++++||||.+.++.........+  .+.    ........+++++|
T Consensus       154 -----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  228 (274)
T PRK07775        154 -----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASD  228 (274)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHH
Confidence                 2245699999999988763       48999999999986653211100000  000    01112245799999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIA  311 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~  311 (530)
                      +|++++++++++.  .+.+||+.=
T Consensus       229 va~a~~~~~~~~~--~~~~~~~~~  250 (274)
T PRK07775        229 LARAITFVAETPR--GAHVVNMEV  250 (274)
T ss_pred             HHHHHHHHhcCCC--CCCeeEEee
Confidence            9999999998764  466777763

>PRK09186 flagellin modification protein A; Provisional

Probab=99.87  E-value=4.3e-21  Score=190.25  Aligned_cols=220  Identities=16%  Similarity=0.129  Sum_probs=151.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...           .....+.++.+|+.|.+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~d~~~~   70 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKE-----------FKSKKLSLVELDITDQESL   70 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhh-----------cCCCceeEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988777665544321           0124577889999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC---------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccC
Q 009648          158 EPALG-------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~---------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~  217 (530)
                      .++++       ++|+||||||....         +..++...+++|+.+...++++    +++.+.++||++||..+..
T Consensus        71 ~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~  150 (256)
T PRK09186         71 EEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV  150 (256)
T ss_pred             HHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence            77774       38999999974321         1122345577888776655544    4556778999999965422


Q ss_pred             C-CC---ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHH
Q 009648          218 F-GF---PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       218 ~-~~---~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~  286 (530)
                      . ..   +.........|+.+|.+.+.+.+       ..|+++++|+||++++......    .............++++
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~----~~~~~~~~~~~~~~~~~  226 (256)
T PRK09186        151 APKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAF----LNAYKKCCNGKGMLDPD  226 (256)
T ss_pred             cccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHH----HHHHHhcCCccCCCCHH
Confidence            1 10   11111222369999999888765       2689999999999986532110    00001111234579999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |+|+++++++.+.. ...|+++.+.++
T Consensus       227 dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        227 DICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             HhhhhHhheeccccccccCceEEecCC
Confidence            99999999997653 235777776665

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.1e-21  Score=185.91  Aligned_cols=207  Identities=16%  Similarity=0.128  Sum_probs=153.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+..+.....+.+..               .+++++.+|+.|.+++
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~   69 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---------------DALRIGGIDLVDPQAA   69 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---------------cCceEEEeecCCHHHH
Confidence            4578999999999999999999999999999999988765554332221               3567888999998887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+|||++|....      ...++...+++|+.++.++++++.    +.++++||++||.+....  
T Consensus        70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--  147 (239)
T PRK12828         70 RRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA--  147 (239)
T ss_pred             HHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC--
Confidence            76664       68999999985422      111234457899999999888875    457889999999876332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|.+.+.+++       ..++++++||||+++++.....    .    .......+++++|+|++++
T Consensus       148 ----~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~----~----~~~~~~~~~~~~dva~~~~  215 (239)
T PRK12828        148 ----GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD----M----PDADFSRWVTPEQIAAVIA  215 (239)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc----C----CchhhhcCCCHHHHHHHHH
Confidence                1234579999998776664       2589999999999998743211    0    0111234689999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.+.. ...++.+++.++.
T Consensus       216 ~~l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        216 FLLSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             HHhCcccccccceEEEecCCE
Confidence            9998753 2357888887764

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.87  E-value=9.7e-21  Score=186.64  Aligned_cols=217  Identities=12%  Similarity=0.089  Sum_probs=158.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||++|++.|+++|++|++++|+.++...+.+.++..             ..++.++.+|+.|.+++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   71 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA-------------GGRAHAIAADLADPASV   71 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            45689999999999999999999999999999999988777665544322             24789999999999988


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       +++|+||||+|.....      ..++...+++|+.++.++++++..    .+.++||++||......  
T Consensus        72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  149 (250)
T PRK12939         72 QRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWG--  149 (250)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccC--
Confidence            7776       4689999999964321      122345578999999999888753    34569999999755322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|...+.+++.       .++++++|+||++.++....... ..............+++.+|+|+++
T Consensus       150 ----~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  225 (250)
T PRK12939        150 ----APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAV  225 (250)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                12245699999999887752       58999999999998775432111 0100111122234568999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++.+.. ...|+.+.+.++.
T Consensus       226 ~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        226 LFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHhCccccCccCcEEEECCCc
Confidence            99997642 3468888888763

>PRK06128 oxidoreductase; Provisional

Probab=99.87  E-value=1.3e-20  Score=192.67  Aligned_cols=218  Identities=16%  Similarity=0.126  Sum_probs=156.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+|+||||||+|+||+++++.|+++|++|+++.|+.+  ..+.+.+.++..             ..++.++.+|+.|.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~  119 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-------------GRKAVALPGDLKDEA  119 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-------------CCeEEEEecCCCCHH
Confidence            45689999999999999999999999999998887643  233333333221             146788999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       +++|+||||||....       +..++...+++|+.++.++++++...  ..++||++||...... 
T Consensus       120 ~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~-  198 (300)
T PRK06128        120 FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP-  198 (300)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC-
Confidence            877766       468999999995321       22345677999999999999999753  2359999999876332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-c-cceeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-T-HNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~-~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ...+..|+.+|.+.+.+++.       .|+++++|+||+|.++...... . ..+.........+.+.+.+|||+
T Consensus       199 -----~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  273 (300)
T PRK06128        199 -----SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAP  273 (300)
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHH
Confidence                 12345699999999877652       6999999999999988532110 0 00101111223345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++++.+.. +..|++|++.++..
T Consensus       274 ~~~~l~s~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        274 LYVLLASQESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             HHHHHhCccccCccCcEEeeCCCEe
Confidence            9999987643 34688999988753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.86  E-value=2.2e-20  Score=186.17  Aligned_cols=202  Identities=15%  Similarity=0.097  Sum_probs=153.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++++++|||||++||..+++.|+++|++|+++.|+.+++..+.+++++.            ..-.++++.+||.|.++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~------------~~v~v~vi~~DLs~~~~   70 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK------------TGVEVEVIPADLSDPEA   70 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh------------hCceEEEEECcCCChhH
Confidence            456789999999999999999999999999999999999999999888754            12568899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHH----HHHHhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll----~aa~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +..+..       .+|++|||||....      +..+...++++|+.+...|.    ..+.+.+.++||+|+|.+.....
T Consensus        71 ~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~  150 (265)
T COG0300          71 LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT  150 (265)
T ss_pred             HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence            877663       58999999996533      33334677999998866554    44567788899999998775442


Q ss_pred             CccccccchhHHHHHHHHHHHH-------HHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~-------l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                            .....|+++|+.+-.+       ++..|++++.|.||.+....... .  ...... ......+++.+|+|+.+
T Consensus       151 ------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~--~~~~~~-~~~~~~~~~~~~va~~~  220 (265)
T COG0300         151 ------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-K--GSDVYL-LSPGELVLSPEDVAEAA  220 (265)
T ss_pred             ------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-c--cccccc-ccchhhccCHHHHHHHH
Confidence                  2245699999976533       33489999999999998764321 0  000000 00112358899999999


Q ss_pred             HHHHhCCC
Q 009648          293 ACMAKNRS  300 (530)
Q Consensus       293 ~~ll~~~~  300 (530)
                      +..+....
T Consensus       221 ~~~l~~~k  228 (265)
T COG0300         221 LKALEKGK  228 (265)
T ss_pred             HHHHhcCC
Confidence            99998865

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.4e-20  Score=183.51  Aligned_cols=214  Identities=14%  Similarity=0.120  Sum_probs=152.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc----hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~----~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .++|+||||||+|+||++++++|+++|++|++++|..    +....+.+++...             ..+++++.+|+.|
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~   70 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-------------GGKALGLAFDVRD   70 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-------------CCcEEEEEccCCC
Confidence            3467999999999999999999999999999977643    3333333322211             2578999999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH-----hcCCCEEEEEcCCCc
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGT  215 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~-----~~gv~r~V~iSS~~v  215 (530)
                      .+++.+++       .++|+||||+|....      +..++...+++|+.++.++++++.     +.+.++||++||.+.
T Consensus        71 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~  150 (249)
T PRK12827         71 FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG  150 (249)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchh
Confidence            98887776       468999999996432      122245568899999999999987     456679999999766


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      ...      ......|+.+|.+.+.+++.       .++++++||||+++++............  .........+++|+
T Consensus       151 ~~~------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~v  222 (249)
T PRK12827        151 VRG------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHLL--NPVPVQRLGEPDEV  222 (249)
T ss_pred             cCC------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHHH--hhCCCcCCcCHHHH
Confidence            322      23345799999988876652       5899999999999987532211100000  01112234589999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |+++++++.+.. ...++.+++.++
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        223 AALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHHHcCcccCCccCcEEEeCCC
Confidence            999999986642 234778888765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1e-20  Score=188.21  Aligned_cols=215  Identities=15%  Similarity=0.123  Sum_probs=153.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+.               ..++.++.+|+.|.+++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~~   73 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP---------------GAKVTATVADVADPAQV   73 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---------------cCceEEEEccCCCHHHH
Confidence            456899999999999999999999999999999998776555433211               12678999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCC-CC------ccCCCCcchHhHHHHHHHHHHHHH----hcCC-CEEEEEcCCCccCC
Q 009648          158 EPAL-------GNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~-~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv-~r~V~iSS~~v~~~  218 (530)
                      .+++       .++|+|||++|.. ..      ...++...+++|+.++.++++++.    ..+. ++||++||.+.. .
T Consensus        74 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~-~  152 (264)
T PRK12829         74 ERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGR-L  152 (264)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccc-c
Confidence            7766       4789999999965 21      112235668999999999888874    3344 578888876542 2


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-----cee-ec-----ccCcccC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-----NIT-LS-----QEDTLFG  280 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-----~~~-~~-----~~~~~~~  280 (530)
                      +.     .....|+.+|...|.+++.       .++++++||||+++|+........     ... ..     .......
T Consensus       153 ~~-----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (264)
T PRK12829        153 GY-----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLG  227 (264)
T ss_pred             CC-----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCC
Confidence            21     2245699999998877653       589999999999999864321100     000 00     0011123


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .+++++|+|++++.++... ....++.|++.++.
T Consensus       228 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        228 RMVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            4799999999999988643 22358899998875

>PLN02253 xanthoxin dehydrogenase

Probab=99.86  E-value=1.5e-20  Score=189.45  Aligned_cols=219  Identities=14%  Similarity=0.114  Sum_probs=156.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||++++++|+++|++|++++|+....+.+.+.+.              ...+++++.+|+.|.+++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~   81 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--------------GEPNVCFFHCDVTVEDDV   81 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--------------CCCceEEEEeecCCHHHH
Confidence            457899999999999999999999999999999998766555433221              124789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~  218 (530)
                      .++++       ++|+||||||....        +..++...+++|+.++.++++++..    .+.++||++||......
T Consensus        82 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  161 (280)
T PLN02253         82 SRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG  161 (280)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc
Confidence            87774       68999999986422        1123456799999999998888763    34468999999765322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc--ccc---cee------ecccCcccC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETH---NIT------LSQEDTLFG  280 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~--~~~---~~~------~~~~~~~~~  280 (530)
                      .      .....|+.+|++.|.+++.       .|+++++|+||++.++.....  ...   ...      ........+
T Consensus       162 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (280)
T PLN02253        162 G------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKG  235 (280)
T ss_pred             C------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcC
Confidence            1      1234699999999988763       589999999999987642110  000   000      000111122


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP  316 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t  316 (530)
                      ..++.+|+|+++++++.+.. ...|.++++.++...+
T Consensus       236 ~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~  272 (280)
T PLN02253        236 VELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT  272 (280)
T ss_pred             CCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhc
Confidence            34789999999999987643 3457889888875433

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=186.15  Aligned_cols=217  Identities=13%  Similarity=0.093  Sum_probs=156.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||++|++.|+++|++|++++|+..+.+.+.+.+...             ..+++++.+|++|.+++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   69 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL-------------GRRALAVPTDITDEDQC   69 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-------------CCceEEEecCCCCHHHH
Confidence            34689999999999999999999999999999999987766665544322             14689999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      ..++       +++|+||||||....       +..++...+++|+.++..+++++...   ..++||++||......  
T Consensus        70 ~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~--  147 (258)
T PRK07890         70 ANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS--  147 (258)
T ss_pred             HHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC--
Confidence            7665       468999999985321       12234566899999999999998752   2359999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-cc----c----ceeec--ccCcccCCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET----H----NITLS--QEDTLFGGQ  282 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~~----~----~~~~~--~~~~~~~g~  282 (530)
                          ...+..|+.+|...+.+++.       .++++++||||.++++..... ..    .    .....  ......+.+
T Consensus       148 ----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK07890        148 ----QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRL  223 (258)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcccc
Confidence                23456799999999887763       589999999999999853210 00    0    00000  011122346


Q ss_pred             CCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          283 VSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++|+|+++++++.+. ....|+++.+.++.
T Consensus       224 ~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        224 PTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            78999999999999753 22356777666553

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.9e-20  Score=186.34  Aligned_cols=202  Identities=17%  Similarity=0.152  Sum_probs=146.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++|+||||+|+||++++++|+++|++|++++|+.++...                     ..+++++++|+.|.+++.
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------------~~~~~~~~~D~~d~~~~~   61 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------------IPGVELLELDVTDDASVQ   61 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------------cCCCeeEEeecCCHHHHH
Confidence            45789999999999999999999999999999998754321                     146889999999999888


Q ss_pred             HHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       .+|+||||||.....      ..++...+++|+.++.++++++    ++.+.++||++||......   
T Consensus        62 ~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---  138 (270)
T PRK06179         62 AAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP---  138 (270)
T ss_pred             HHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC---
Confidence            8774       479999999965332      1224567899999988888874    5677889999999755321   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecc-----------cCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ-----------EDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~-----------~~~~~~g~V  283 (530)
                         ......|+.+|+..+.+++       ..|+++++||||++.++...........+..           .........
T Consensus       139 ---~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (270)
T PRK06179        139 ---APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD  215 (270)
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCC
Confidence               1224579999999987755       3699999999999988753221110000000           001122346


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +.+|+|+.++.++..+.  .+..|..
T Consensus       216 ~~~~va~~~~~~~~~~~--~~~~~~~  239 (270)
T PRK06179        216 APEVVADTVVKAALGPW--PKMRYTA  239 (270)
T ss_pred             CHHHHHHHHHHHHcCCC--CCeeEec
Confidence            78999999999998764  2445533

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-20  Score=185.22  Aligned_cols=214  Identities=18%  Similarity=0.140  Sum_probs=148.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+.. ...+.+++...             ..++.++.+|+.|.+++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   71 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA-------------GGEALALTADLETYAGA   71 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc-------------CCeEEEEEEeCCCHHHH
Confidence            45689999999999999999999999999999999853 33333333211             24678899999998877


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHH----HHHHhcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll----~aa~~~gv~r~V~iSS~~v~~~~  219 (530)
                      .+++       +++|+||||||....       +..++...+++|+.++..++    +.+++.+.++||++||....  +
T Consensus        72 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~  149 (260)
T PRK12823         72 QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--G  149 (260)
T ss_pred             HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--C
Confidence            6655       368999999984311       12223455788888776554    44555677799999998652  1


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-------cccceee------cccCccc
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------ETHNITL------SQEDTLF  279 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-------~~~~~~~------~~~~~~~  279 (530)
                      .      ....|+.+|++.+.+++.       .|+++++|+||+|+++.....       .......      .......
T Consensus       150 ~------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T PRK12823        150 I------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM  223 (260)
T ss_pred             C------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc
Confidence            1      134699999999987753       489999999999999742110       0000000      0011222


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.+.+.+|||+++++++.+.. ...+++|++.+++
T Consensus       224 ~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        224 KRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             ccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            345679999999999997653 2357889887764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.86  E-value=3e-20  Score=182.22  Aligned_cols=217  Identities=17%  Similarity=0.146  Sum_probs=151.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+++||||||+|+||+++++.|+++|++|+++.|+..+ ...+.+.++..             ..++.++.+|+.|.++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   69 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-------------GGKALAVQGDVSDAES   69 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            456799999999999999999999999999998887653 33333322211             2578899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       ++|+||||+|......      .++...+++|+.++.++++++..    .+.++||++||.... ++
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~-~~  148 (248)
T PRK05557         70 VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGL-MG  148 (248)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccC-cC
Confidence            877664       6899999998643221      12345577999999999888764    356789999997442 22


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                      .     .....|+.+|.+.+.+++       ..++++++||||++.++...................+.+++.+|+|+++
T Consensus       149 ~-----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (248)
T PRK05557        149 N-----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAV  223 (248)
T ss_pred             C-----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            1     224569999998886664       2589999999999876532211000000001111223468999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+++.+.. ...+++|+|.++.
T Consensus       224 ~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        224 AFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHHcCcccCCccccEEEecCCc
Confidence            99887632 2457899998763

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.5e-20  Score=185.11  Aligned_cols=218  Identities=11%  Similarity=0.110  Sum_probs=155.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..             ..++.++.+|+.|.+++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   70 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-------------GGEAVALAGDVRDEAYA   70 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            45689999999999999999999999999999999988777766554432             14688999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       .+|+||||||....       +..++...+++|+.+...++++    +++.+.++||++||......+
T Consensus        71 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~  150 (254)
T PRK07478         71 KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG  150 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC
Confidence            77663       68999999996421       1123456789999887776554    455666799999997553221


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-cee-ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                           ...+..|+.+|++.+.+++.       .|+++++|+||+|.++........ ... ........+.....+|+|+
T Consensus       151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  225 (254)
T PRK07478        151 -----FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQ  225 (254)
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 22356799999999877652       589999999999987732211100 000 0011112234578999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++++.+. ....|+++.+.++.
T Consensus       226 ~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        226 AALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             HHHHHcCchhcCCCCCeEEeCCch
Confidence            999999764 33457788776653

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.5e-20  Score=186.56  Aligned_cols=226  Identities=16%  Similarity=0.076  Sum_probs=156.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||+++++.|+++|++|++++|+.++++.+.+.++..             ..++.++.+|++|.+++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~v   70 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE-------------GFDVHGVMCDVRHREEV   70 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEeCCCCCHHHH
Confidence            56789999999999999999999999999999999987776665544321             14688899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       .+|+||||||....      ...++...+++|+.++.++++++.    +++ .++||++||...... 
T Consensus        71 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~-  149 (275)
T PRK05876         71 THLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP-  149 (275)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-
Confidence            77663       57999999996422      122245568999999999988875    344 469999999765322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-cee--------ecccCcccCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NIT--------LSQEDTLFGGQV  283 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~~--------~~~~~~~~~g~V  283 (530)
                           ......|+.+|.+.+.+.+       ..|+++++|+||.+.++........ ...        ..........++
T Consensus       150 -----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (275)
T PRK05876        150 -----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNL  224 (275)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCC
Confidence                 2345679999997554432       2689999999999988743211100 000        000001123468


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      +++|+|++++.++.++.     .|.+.+.  .....|.+.+.++..
T Consensus       225 ~~~dva~~~~~ai~~~~-----~~~~~~~--~~~~~~~~~~~~~~~  263 (275)
T PRK05876        225 GVDDIAQLTADAILANR-----LYVLPHA--ASRASIRRRFERIDR  263 (275)
T ss_pred             CHHHHHHHHHHHHHcCC-----eEEecCh--hhHHHHHHHHHHHHH
Confidence            99999999999997653     4444433  334555555555443

>PRK05717 oxidoreductase; Validated

Probab=99.86  E-value=3.1e-20  Score=184.66  Aligned_cols=215  Identities=13%  Similarity=0.139  Sum_probs=153.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++++||||||+|+||+++++.|+++|++|++++|+..+...+.+.   .             ..++.++.+|+.|.++
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~---~-------------~~~~~~~~~Dl~~~~~   70 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKA---L-------------GENAWFIAMDVADEAQ   70 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHH---c-------------CCceEEEEccCCCHHH
Confidence            46678999999999999999999999999999999987655543221   1             1468899999999888


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~  218 (530)
                      +.+++       +.+|+||||||....        +..++...+++|+.++.++++++..   ...++||++||......
T Consensus        71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~  150 (255)
T PRK05717         71 VAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS  150 (255)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC
Confidence            76554       357999999996432        1122456789999999999999863   23368999999765322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~DVA~a  291 (530)
                       .     .....|+.+|++.+.+++.      .++++++|+||++.++.......... .........+...+++|+|.+
T Consensus       151 -~-----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  224 (255)
T PRK05717        151 -E-----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAM  224 (255)
T ss_pred             -C-----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHH
Confidence             1     1245699999999988763      35899999999999874321100000 000111223456789999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.+.. ...|+++.+.++.
T Consensus       225 ~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        225 VAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             HHHHcCchhcCccCcEEEECCCc
Confidence            999987542 2357778776553

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.6e-20  Score=184.02  Aligned_cols=215  Identities=15%  Similarity=0.074  Sum_probs=153.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||++|++.|+++|++|++++|+.++.....+.+.              ...++.++++|+.|.+++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~   68 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--------------AGGRAFARQGDVGSAEAV   68 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--------------cCCeEEEEEcCCCCHHHH
Confidence            456899999999999999999999999999999999876655443322              124689999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||+|....      +..++...+++|+.++.++.+++    ++.+.++||++||.+....  
T Consensus        69 ~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~--  146 (252)
T PRK06138         69 EALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG--  146 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC--
Confidence            87764       68999999996432      11223445889999987766654    5567789999999855321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-----e-ecccCcccCCCCCHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-----T-LSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-----~-~~~~~~~~~g~V~v~D  287 (530)
                          ......|+.+|.+.+.+++.       .|++++++|||+++++..........     . ..........+++++|
T Consensus       147 ----~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  222 (252)
T PRK06138        147 ----GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEE  222 (252)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHH
Confidence                12345799999998877653       48999999999999875322111000     0 0001112234789999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +|++++.++.+.. ...|..+.+.++
T Consensus       223 ~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        223 VAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHHHcCchhcCccCCEEEECCC
Confidence            9999999998754 234666766554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=4.1e-20  Score=182.62  Aligned_cols=217  Identities=16%  Similarity=0.080  Sum_probs=153.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++||||||+|+||++++++|+++|++|++..|+. .........++..             ..++.++.+|+++.++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   70 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN-------------GGEGIGVLADVSTREG   70 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc-------------CCeeEEEEeccCCHHH
Confidence            3468999999999999999999999999998887643 3333322222211             1357788999999887


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc
Q 009648          157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~  221 (530)
                      +..++       .++|+||||||.....      ..++...+++|+.+..++++++.+.  ..++||++||......   
T Consensus        71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---  147 (252)
T PRK06077         71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP---  147 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC---
Confidence            77665       3689999999963221      1112456889999999999888754  3358999999765322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccc-cce---eecccCcccCCCCCHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-HNI---TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~-~~~---~~~~~~~~~~g~V~v~DVA~a  291 (530)
                         ..+...|+.+|..+|.+++.      .++++++|+||++.++....... ...   .........+.+++++|+|++
T Consensus       148 ---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  224 (252)
T PRK06077        148 ---AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEF  224 (252)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHH
Confidence               34456899999999888763      37999999999998774321100 000   000111223467999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      +++++.... ..+++|++.++..
T Consensus       225 ~~~~~~~~~-~~g~~~~i~~g~~  246 (252)
T PRK06077        225 VAAILKIES-ITGQVFVLDSGES  246 (252)
T ss_pred             HHHHhCccc-cCCCeEEecCCee
Confidence            999997654 4688999998854

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.6e-20  Score=181.41  Aligned_cols=197  Identities=14%  Similarity=0.100  Sum_probs=148.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+||||+|+||++|+++|+++|++|++++|+..+...+.+.+...             ..++.++.+|+.|.+++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   71 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-------------GVKVVIATADVSDYEEV   71 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-------------CCeEEEEECCCCCHHHH
Confidence            34678999999999999999999999999999999987766655444322             24788999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||+|....      ...++...+++|+.++.++++++.    +.+.+++|++||......  
T Consensus        72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~--  149 (239)
T PRK07666         72 TAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG--  149 (239)
T ss_pred             HHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC--
Confidence            77774       78999999986432      112235668999999998888876    456679999999765332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|.+.+.+++       ..|+++++||||++.++.....   ...    .......+..+|+|++++
T Consensus       150 ----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~~~----~~~~~~~~~~~~~a~~~~  218 (239)
T PRK07666        150 ----AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---GLT----DGNPDKVMQPEDLAEFIV  218 (239)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---ccc----ccCCCCCCCHHHHHHHHH
Confidence                1234569999998877754       2689999999999987642111   000    111234688999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      .++.++.
T Consensus       219 ~~l~~~~  225 (239)
T PRK07666        219 AQLKLNK  225 (239)
T ss_pred             HHHhCCC
Confidence            9998763

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.1e-20  Score=179.93  Aligned_cols=206  Identities=15%  Similarity=0.131  Sum_probs=151.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++|+||||+|+||++++++|+++|++|++++|++.+...+.+.+...              .+++++.+|+.|.+++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~~   69 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--------------GNVLGLAADVRDEADV   69 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--------------CcEEEEEccCCCHHHH
Confidence            34689999999999999999999999999999999987766655433211              5688999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ..+++       ++|+||||+|.....      ..++...+++|+.++.++++++.+   .+.++||++||......   
T Consensus        70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---  146 (237)
T PRK07326         70 QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF---  146 (237)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC---
Confidence            77664       789999999864321      122345688999999998888764   35578999999755322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|..+|++.+.+.+.       .|+++++||||++.++.......         ......+..+|++++++.
T Consensus       147 ---~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~---------~~~~~~~~~~d~a~~~~~  214 (237)
T PRK07326        147 ---FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS---------EKDAWKIQPEDIAQLVLD  214 (237)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc---------hhhhccCCHHHHHHHHHH
Confidence               22345699999987766542       68999999999998764321100         001124889999999999


Q ss_pred             HHhCCCCCCCcEEEEeCC
Q 009648          295 MAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~  312 (530)
                      ++..+.......+.+...
T Consensus       215 ~l~~~~~~~~~~~~~~~~  232 (237)
T PRK07326        215 LLKMPPRTLPSKIEVRPS  232 (237)
T ss_pred             HHhCCccccccceEEecC
Confidence            998876555666666543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.9e-20  Score=185.03  Aligned_cols=214  Identities=15%  Similarity=0.122  Sum_probs=153.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.+++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~~~~   67 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----------------GERARFIATDITDDAAI   67 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCeeEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999987665543321                14688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-----ccCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCcc
Q 009648          158 EPALG-------NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-----~~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      .++++       .+|+||||||....     ...++...+++|+.++.++++++..   .+.++||++||......    
T Consensus        68 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----  143 (261)
T PRK08265         68 ERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA----  143 (261)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC----
Confidence            77663       67999999996422     2223456688999999988887653   34469999999765322    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-c-e--eecccCcccCCCCCHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-I--TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~-~--~~~~~~~~~~g~V~v~DVA~a  291 (530)
                        ......|+.+|...+.+++.       .|+++++|+||++.++........ . .  .+.......+.....+|||++
T Consensus       144 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  221 (261)
T PRK08265        144 --QTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQV  221 (261)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHH
Confidence              12345799999998877763       589999999999987642110000 0 0  000111223345688999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.+.. ...|+++.+.++.
T Consensus       222 ~~~l~s~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        222 VAFLCSDAASFVTGADYAVDGGY  244 (261)
T ss_pred             HHHHcCccccCccCcEEEECCCe
Confidence            999997642 3467788877764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.1e-20  Score=183.25  Aligned_cols=216  Identities=17%  Similarity=0.125  Sum_probs=152.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|+||||||+|+||++|++.|+++|++|++++|+.. ......+.++..             ..++.++.+|++|.+++.
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   68 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-------------GVEVIFFPADVADLSAHE   68 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-------------CCceEEEEecCCCHHHHH
Confidence            468999999999999999999999999999998753 333333322211             247899999999988876


Q ss_pred             HHh-------CCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHhc-----C-----CCEEEEEcCC
Q 009648          159 PAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA-----K-----VNHFIMVSSL  213 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----g-----v~r~V~iSS~  213 (530)
                      +++       +.+|+||||||....        ...++...+++|+.++.+|++++.+.     +     +++||++||.
T Consensus        69 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~  148 (256)
T PRK12745         69 AMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSV  148 (256)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECCh
Confidence            655       468999999986421        11234556899999999998887542     1     5689999997


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCH
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSN  285 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v  285 (530)
                      ......      .....|+.+|+++|.+++       ..|+++++||||+++++.......... .+.........+.++
T Consensus       149 ~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK12745        149 NAIMVS------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEP  222 (256)
T ss_pred             hhccCC------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCH
Confidence            653321      234569999999987765       268999999999999875321110000 000111223346789


Q ss_pred             HHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          286 LQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +|+++++..++.... ...|++|++.++..
T Consensus       223 ~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~  252 (256)
T PRK12745        223 EDVARAVAALASGDLPYSTGQAIHVDGGLS  252 (256)
T ss_pred             HHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence            999999999886542 23578999988743

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.5e-20  Score=183.38  Aligned_cols=212  Identities=16%  Similarity=0.094  Sum_probs=154.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++++||||+|+||+++++.|+++|++|++++|+.++...+.+.                  .++.++.+|+.|.+++
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v   68 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE------------------TGCEPLRLDVGDDAAI   68 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------------------hCCeEEEecCCCHHHH
Confidence            4568999999999999999999999999999999998766554321                  2356788999999888


Q ss_pred             HHHhC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCCCCccc
Q 009648          158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       158 ~~a~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~~~~~~  223 (530)
                      .++++   .+|+||||||....      ...++...+++|+.++.++++++.+.    + .++||++||.+....     
T Consensus        69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  143 (245)
T PRK07060         69 RAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG-----  143 (245)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC-----
Confidence            88775   58999999996432      11234556779999999999887643    2 369999999765322     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                       ......|+.+|.++|.+++.       .|++++.||||+++++.........  ..........+.+++.+|+|+++++
T Consensus       144 -~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  222 (245)
T PRK07060        144 -LPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILF  222 (245)
T ss_pred             -CCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence             22346799999999987652       5899999999999988532110000  0000011223467999999999999


Q ss_pred             HHhCCC-CCCCcEEEEeCCC
Q 009648          295 MAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.++. ...|+++++.++.
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        223 LLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             HcCcccCCccCcEEeECCCc
Confidence            998653 2358888887653

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.7e-20  Score=182.60  Aligned_cols=216  Identities=14%  Similarity=0.127  Sum_probs=152.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..+|+||||||+|+||+++++.|+++|++|++++|. .+..+.+.+.+...             ..+++++.+|++|.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~d~~   72 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL-------------GRRAVALQADLADEA   72 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHH
Confidence            4567899999999999999999999999999988775 34444444333221             246889999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~~  218 (530)
                      ++.++++       ++|+||||||....      ...++...+++|+.++.++++++...    +.+++|+++|......
T Consensus        73 ~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~  152 (258)
T PRK09134         73 EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL  152 (258)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC
Confidence            8877663       57999999986432      12234567899999999999887753    3468898887644221


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                            ...+..|+.+|.++|.+++.      .++++++|+||++++.......  .+.........+...+++|+|+++
T Consensus       153 ------~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~d~a~~~  224 (258)
T PRK09134        153 ------NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPE--DFARQHAATPLGRGSTPEEIAAAV  224 (258)
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChH--HHHHHHhcCCCCCCcCHHHHHHHH
Confidence                  11235799999998877653      2489999999999764321100  000001112233458899999999


Q ss_pred             HHHHhCCCCCCCcEEEEeCCCC
Q 009648          293 ACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      +++++.+. ..++.|++.++..
T Consensus       225 ~~~~~~~~-~~g~~~~i~gg~~  245 (258)
T PRK09134        225 RYLLDAPS-VTGQMIAVDGGQH  245 (258)
T ss_pred             HHHhcCCC-cCCCEEEECCCee
Confidence            99998765 4688888888754

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=4.1e-20  Score=184.06  Aligned_cols=220  Identities=15%  Similarity=0.073  Sum_probs=155.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.+++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-------------~~~~~~~~~Dl~d~~~i   76 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-------------GIDALWIAADVADEADI   76 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEccCCCHHHH
Confidence            45689999999999999999999999999999999987766655444321             24688999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc-----CCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r~V~iSS~~v~~~~  219 (530)
                      ++++       .++|+||||||....      ...++...+++|+.++.++++++...     +.++||++||.+.....
T Consensus        77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~  156 (259)
T PRK08213         77 ERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGN  156 (259)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCC
Confidence            6655       368999999985321      11223456789999999999987654     66799999997543221


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                      ..  ...+...|+.+|+..+.+++.       .|+++++++||++.++.....................+...+|||+++
T Consensus       157 ~~--~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  234 (259)
T PRK08213        157 PP--EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAA  234 (259)
T ss_pred             Cc--cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            11  112346799999999988763       589999999999987643211000000000111122345789999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++.... ...|+++++.++
T Consensus       235 ~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        235 LLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             HHHhCccccCccCCEEEECCC
Confidence            99987543 346788877765

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.85  E-value=3.9e-20  Score=184.07  Aligned_cols=217  Identities=12%  Similarity=0.094  Sum_probs=153.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+...           ....+++++.+|++|.+++..
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~i~~   70 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAE-----------YGEGMAYGFGADATSEQSVLA   70 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----------cCCceeEEEEccCCCHHHHHH
Confidence            568999999999999999999999999999999987766655443321           001368999999999888776


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCCCc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~~~  221 (530)
                      ++       ..+|+||||||....      ...++...+++|+.++.++++++.+    .+ -++||++||..... +. 
T Consensus        71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-~~-  148 (259)
T PRK12384         71 LSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-GS-  148 (259)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-CC-
Confidence            65       467999999985432      1223455678999998877776653    45 35999999965322 21 


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc--c----cc------eeecccCcccCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--T----HN------ITLSQEDTLFGGQ  282 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~--~----~~------~~~~~~~~~~~g~  282 (530)
                          .....|+.+|++.+.+++       ..|+++++||||++++.......  .    ..      ..........+.+
T Consensus       149 ----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (259)
T PRK12384        149 ----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG  224 (259)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence                223579999999876654       37899999999998765321100  0    00      0000112234567


Q ss_pred             CCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.+||+++++.++.+.. ...|++|++.++.
T Consensus       225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             CCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence            899999999999987653 2358899999875

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.3e-20  Score=180.63  Aligned_cols=198  Identities=17%  Similarity=0.164  Sum_probs=146.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+.|+++|+++|++|++++|+.++...+.+.+.+.             ..++.++.+|++|.+++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   70 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST-------------GVKAAAYSIDLSNPEAI   70 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC-------------CCcEEEEEccCCCHHHH
Confidence            34678999999999999999999999999999999987766655444321             25788999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ..+++       ++|+||||+|.....      ..++...+++|+.++.++++++    .+.+.++||++||......  
T Consensus        71 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--  148 (241)
T PRK07454         71 APGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA--  148 (241)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC--
Confidence            76664       589999999964321      1234556889999888877665    4456679999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|...+.+++       ..|+++++||||++.++.....   ...   ........+.++|+|++++
T Consensus       149 ----~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~---~~~---~~~~~~~~~~~~~va~~~~  218 (241)
T PRK07454        149 ----FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE---TVQ---ADFDRSAMLSPEQVAQTIL  218 (241)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc---ccc---cccccccCCCHHHHHHHHH
Confidence                2234579999999887764       2589999999999987642110   000   0011124589999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      +++.++.
T Consensus       219 ~l~~~~~  225 (241)
T PRK07454        219 HLAQLPP  225 (241)
T ss_pred             HHHcCCc
Confidence            9998775

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.8e-20  Score=183.11  Aligned_cols=219  Identities=13%  Similarity=0.081  Sum_probs=157.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...           ....++.++.+|+.|.+++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~   73 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD-----------VAGARVLAVPADVTDAASV   73 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----------cCCceEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999988777766554421           0124688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ..+++       ++|+||||||....      ...++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  151 (260)
T PRK07063         74 AAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI--  151 (260)
T ss_pred             HHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC--
Confidence            77663       68999999995422      223455668899999988888865    345679999999755322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-cc--c-c-e-eecccCcccCCCCCHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ET--H-N-I-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~~--~-~-~-~~~~~~~~~~g~V~v~D  287 (530)
                          ......|+.+|++.+.+++.       .|++++.|+||+|.++..... ..  . . . .........+.+...+|
T Consensus       152 ----~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~  227 (260)
T PRK07063        152 ----IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEE  227 (260)
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHH
Confidence                22345799999999988763       589999999999987642110 00  0 0 0 00001112334578999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +|+++++++.+.. ...|+++.+.++.
T Consensus       228 va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        228 VAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             HHHHHHHHcCccccccCCcEEEECCCe
Confidence            9999999997643 3467777777664

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=6.2e-20  Score=182.30  Aligned_cols=217  Identities=11%  Similarity=0.060  Sum_probs=157.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||++++++|+++|++|++++|+..+...+.+.+...             ..++.++.+|+.|.+++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~~   73 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE-------------GIKAHAAPFNVTHKQEV   73 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEecCCCCHHHH
Confidence            45789999999999999999999999999999999987777665544322             14678889999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       .++|+||||+|....      ...++...+++|+.++.++++++..    .+.++||++||......  
T Consensus        74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--  151 (254)
T PRK08085         74 EAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG--  151 (254)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC--
Confidence            7766       358999999996421      2234556799999998888887654    45679999999754322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|.+.+.+++.       .|+++++|+||++.++....... ... .........+.+...+|||++
T Consensus       152 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~  227 (254)
T PRK08085        152 ----RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGA  227 (254)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                22346799999999988763       58999999999999874321110 000 000111223456789999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +.+++.+. ....|.++.+.++.
T Consensus       228 ~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        228 AVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             HHHHhCccccCCcCCEEEECCCe
Confidence            99999754 23457777666653

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.85  E-value=5.7e-20  Score=183.94  Aligned_cols=217  Identities=16%  Similarity=0.133  Sum_probs=156.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.++..             ..++.++.+|++|.+++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   74 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA-------------GRRAHVVAADLAHPEAT   74 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999987776665544321             25688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++..     .+.++||++||...... 
T Consensus        75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-  153 (263)
T PRK07814         75 AGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-  153 (263)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-
Confidence            76653       68999999985322      2223456789999999999999874     45679999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccccc-cee-ecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~-~~~~~~~~~g~V~v~DVA~a  291 (530)
                           ......|+.+|+.++.+++.      .+++++.|+||++.++........ .+. ..............+|+|++
T Consensus       154 -----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  228 (263)
T PRK07814        154 -----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAA  228 (263)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                 23356799999999988763      368999999999976532211100 000 00011122234688999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++.+. ....++.+.+.++.
T Consensus       229 ~~~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        229 AVYLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHHHcCccccCcCCCEEEECCCc
Confidence            99999763 23457777776653

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.85  E-value=6.4e-20  Score=181.98  Aligned_cols=216  Identities=16%  Similarity=0.131  Sum_probs=150.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|++|||||+|+||+++++.|+++|++|+++. |+.++...+...+...             ...+..+.+|+.|.++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   68 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-------------GGSAFSIGANLESLHG   68 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc-------------CCceEEEecccCCHHH
Confidence            3568999999999999999999999999999875 5555555444333221             1457788999999776


Q ss_pred             HHHHh-------------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          157 IEPAL-------------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       157 l~~a~-------------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      +..++             .++|+||||||.....      ..++...+++|+.++..+++++...  +.++||++||...
T Consensus        69 ~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~  148 (252)
T PRK12747         69 VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT  148 (252)
T ss_pred             HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence            55433             1689999999954221      1124566889999999999887653  3369999999866


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce--eecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|++++.+++.       .|+++++|+||+|.++..........  .........+.+.+++
T Consensus       149 ~~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (252)
T PRK12747        149 RIS------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE  222 (252)
T ss_pred             ccC------CCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH
Confidence            332      22345799999999977752       68999999999999875321100000  0000111234567899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      |||+++++++.+. ....|.++.+.++
T Consensus       223 dva~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        223 DIADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHHHHHcCccccCcCCcEEEecCC
Confidence            9999999998754 2345777877665

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.85  E-value=3.6e-20  Score=189.96  Aligned_cols=175  Identities=22%  Similarity=0.224  Sum_probs=135.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHH---HHHHHHHhhhhccccccCCCCCCCeEEEEecCCC---
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAEN---LVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---  153 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~---l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---  153 (530)
                      ++||+||||||+|++|+++|+.+- .+|++++|..+....   +.+.+..+..+      ......+|+++.+|+..   
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~------~e~~~~ri~vv~gDl~e~~l   74 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHW------DELSADRVEVVAGDLAEPDL   74 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhh------hhhhcceEEEEecccccccC
Confidence            479999999999999999999874 699999997763333   32222222111      12345899999999984   


Q ss_pred             ---HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc--------
Q 009648          154 ---RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA--------  222 (530)
Q Consensus       154 ---~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~--------  222 (530)
                         ...++.+.+.+|.||||++...+ ...+...++.|+.|+..+++.|...+.|.|+||||+++......+        
T Consensus        75 GL~~~~~~~La~~vD~I~H~gA~Vn~-v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~  153 (382)
T COG3320          75 GLSERTWQELAENVDLIIHNAALVNH-VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDE  153 (382)
T ss_pred             CCCHHHHHHHhhhcceEEecchhhcc-cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccc
Confidence               45688888999999999886543 455667789999999999999999999999999999774432111        


Q ss_pred             ------ccccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCc
Q 009648          223 ------AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD  262 (530)
Q Consensus       223 ------~~~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~  262 (530)
                            .......+|+++||.+|.++++   .|++++|+|||+|.|...
T Consensus       154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~  202 (382)
T COG3320         154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR  202 (382)
T ss_pred             ccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence                  0123456899999999999985   689999999999998754

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.4e-20  Score=182.48  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=150.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.++++||||||+|+||+++++.|+++|++|++++|+ ..+...+...   .             ..++.++.+|+.|.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~---~-------------~~~~~~~~~D~~~~~   65 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADE---L-------------GDRAIALQADVTDRE   65 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH---h-------------CCceEEEEcCCCCHH
Confidence            3456899999999999999999999999999987664 4433333221   1             146889999999998


Q ss_pred             hHHHHhC-------C-CcEEEEcccCCCC------------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEc
Q 009648          156 QIEPALG-------N-ASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVS  211 (530)
Q Consensus       156 sl~~a~~-------~-vD~VI~~Ag~~~~------------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iS  211 (530)
                      ++.++++       + +|+||||||....            +..++...+++|+.++.++++++.    +.+.++||++|
T Consensus        66 ~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is  145 (253)
T PRK08642         66 QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIG  145 (253)
T ss_pred             HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEEC
Confidence            8877764       3 8999999985310            111234458999999999998876    34567999999


Q ss_pred             CCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCC
Q 009648          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQV  283 (530)
Q Consensus       212 S~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V  283 (530)
                      |.....      ...++..|+.+|.+.+.+++.       .|++++.|+||++..+......... ..........+.+.
T Consensus       146 s~~~~~------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (253)
T PRK08642        146 TNLFQN------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVT  219 (253)
T ss_pred             CccccC------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCC
Confidence            864422      123456799999999988763       5899999999999875321110000 00001122234578


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      +.+|+|+++++++.+. ....|.++.+.++
T Consensus       220 ~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        220 TPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999999754 3356778877765

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.85  E-value=6.2e-20  Score=181.94  Aligned_cols=197  Identities=17%  Similarity=0.105  Sum_probs=141.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+||||+|+||.++++.|+++|++|++++|+.++...+...+                ..+++++.+|+.|.+++.++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~~~i~~~   64 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----------------GDNLYIAQLDVRNRAAIEEM   64 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------ccceEEEEecCCCHHHHHHH
Confidence            57999999999999999999999999999999987766543321                14688999999999888766


Q ss_pred             h-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCcc
Q 009648          161 L-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +       +++|+||||||....       +..++...+++|+.++.+++++    +.+.+.++||++||.+....    
T Consensus        65 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----  140 (248)
T PRK10538         65 LASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----  140 (248)
T ss_pred             HHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC----
Confidence            6       379999999986321       2223456689999996665555    45567789999999765321    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccc--ccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~--~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|.+.+.+.+.       .|+++++|+||.+.|.....  .......... ......++..+|+|++++
T Consensus       141 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~~~  217 (248)
T PRK10538        141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK-TYQNTVALTPEDVSEAVW  217 (248)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh-hccccCCCCHHHHHHHHH
Confidence              23345799999999887652       58999999999998653211  0000000000 001124578999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      +++..+.
T Consensus       218 ~l~~~~~  224 (248)
T PRK10538        218 WVATLPA  224 (248)
T ss_pred             HHhcCCC
Confidence            9997665

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.85  E-value=5.8e-20  Score=180.56  Aligned_cols=214  Identities=16%  Similarity=0.133  Sum_probs=150.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|+.|++..|+.++.+.+...+                ..+++++.+|+.|.+++
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----------------GERVKIFPANLSDRDEV   67 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------CCceEEEEccCCCHHHH
Confidence            45689999999999999999999999999999999877666543211                14688999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       .++|+||||||....      ...++...+++|+.++.++++++.    +.+.++||++||..... +.
T Consensus        68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~~  146 (245)
T PRK12936         68 KALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVT-GN  146 (245)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCc-CC
Confidence            7664       468999999996432      122345668899999988888764    34667999999975432 21


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                           .....|+.+|.+.+.+++       ..|+++++|+||++.++.....................+.+.+|+++++.
T Consensus       147 -----~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~  221 (245)
T PRK12936        147 -----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVA  221 (245)
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence                 123469999997766654       26899999999998765321110000000001112234567999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.+.. ...|++|++.++.
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        222 YLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHcCccccCcCCCEEEECCCc
Confidence            9987543 2358899988764

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-19  Score=182.10  Aligned_cols=197  Identities=15%  Similarity=0.134  Sum_probs=142.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+|+||+++++.|+++|++|++++|+.+++..+.+                   .+++++.+|+.|.+++.
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------------------~~~~~~~~Dl~d~~~~~   63 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------------------EGLEAFQLDYAEPESIA   63 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------CCceEEEccCCCHHHHH
Confidence            45789999999999999999999999999999999876655422                   35788999999998876


Q ss_pred             HHhC--------CCcEEEEcccCCCCcc------CCCCcchHhHHHH----HHHHHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          159 PALG--------NASVVICCIGASEKEV------FDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       159 ~a~~--------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~g----t~~Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++        .+|+||||||......      .++...+++|+.|    ++++++.+++.+.++||++||......  
T Consensus        64 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--  141 (277)
T PRK05993         64 ALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP--  141 (277)
T ss_pred             HHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC--
Confidence            6653        5799999998643221      2234568899998    566777777888889999999755321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc---cceee----------------cc
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET---HNITL----------------SQ  274 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~---~~~~~----------------~~  274 (530)
                          ......|+.+|++.+.+++       ..|+++++||||+|.++.......   .....                ..
T Consensus       142 ----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T PRK05993        142 ----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEG  217 (277)
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHh
Confidence                2334679999999998764       379999999999998763221000   00000                00


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ........++.+++|+.++.++..+.
T Consensus       218 ~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        218 GGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             hhhccccCCCHHHHHHHHHHHHcCCC
Confidence            00001113689999999999998765

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.85  E-value=9.1e-20  Score=183.65  Aligned_cols=217  Identities=17%  Similarity=0.122  Sum_probs=155.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.+++
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~v   74 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA-------------GGEALAVKADVLDKESL   74 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHHH
Confidence            45689999999999999999999999999999999987776665544322             14688999999998887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc---------------------cCCCCcchHhHHHHHHHHHHH----HHhcCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE---------------------VFDITGPYRIDFQATKNLVDA----ATIAKVN  205 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~---------------------~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~  205 (530)
                      ..++       +++|+||||||.....                     ..++...+++|+.+...++++    +.+.+.+
T Consensus        75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g  154 (278)
T PRK08277         75 EQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG  154 (278)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc
Confidence            7665       4789999999953211                     122345688999988766555    4445667


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc---c---e-e
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH---N---I-T  271 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~---~---~-~  271 (530)
                      +||++||......      ......|+.+|++.+.+++.       .|+++++|+||+|.++........   .   . .
T Consensus       155 ~ii~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~  228 (278)
T PRK08277        155 NIINISSMNAFTP------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERAN  228 (278)
T ss_pred             EEEEEccchhcCC------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHH
Confidence            9999999866332      23356799999999988763       589999999999998743211000   0   0 0


Q ss_pred             ecccCcccCCCCCHHHHHHHHHHHHhC-C-CCCCCcEEEEeCCC
Q 009648          272 LSQEDTLFGGQVSNLQVAELLACMAKN-R-SLSYCKVVEVIAET  313 (530)
Q Consensus       272 ~~~~~~~~~g~V~v~DVA~ai~~ll~~-~-~~~~g~vynv~~~~  313 (530)
                      ........+.+...+|||+++++++.+ . .+..|.++.+.++.
T Consensus       229 ~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~  272 (278)
T PRK08277        229 KILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGF  272 (278)
T ss_pred             HHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCe
Confidence            000112234557899999999999986 3 33467788777663

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.85  E-value=9e-20  Score=177.14  Aligned_cols=202  Identities=17%  Similarity=0.147  Sum_probs=144.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+++ ++|++++|+.++...+.+.                 ..+++++.+|+.|.+++.+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~D~~~~~~~~~   64 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAE-----------------LPGATPFPVDLTDPEAIAA   64 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHH-----------------hccceEEecCCCCHHHHHH
Confidence            478999999999999999999999 9999999998765544321                 1357899999999999998


Q ss_pred             HhC---CCcEEEEcccCCCCcc------CCCCcchHhHHHHHH----HHHHHHHhcCCCEEEEEcCCCccCCCCcccccc
Q 009648          160 ALG---NASVVICCIGASEKEV------FDITGPYRIDFQATK----NLVDAATIAKVNHFIMVSSLGTNKFGFPAAILN  226 (530)
Q Consensus       160 a~~---~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~----~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~  226 (530)
                      +++   ++|+|||++|......      .++...+++|+.+..    ++++++++. .++||++||..+...      ..
T Consensus        65 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~------~~  137 (227)
T PRK08219         65 AVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRA------NP  137 (227)
T ss_pred             HHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCc------CC
Confidence            886   5899999999643221      123445788888854    445545544 469999999765322      22


Q ss_pred             chhHHHHHHHHHHHHHHH-----CC-CCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          227 LFWGVLLWKRKAEEALIA-----SG-LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~-----~g-l~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ....|+.+|...+.+++.     .+ ++++.|+||.+.++........    .........+++++|+|++++++++++.
T Consensus       138 ~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        138 GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQ----EGGEYDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhh----hccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence            346799999998877652     34 9999999999876532111100    0011122457999999999999998865


Q ss_pred             CCCCcEEEEeCC
Q 009648          301 LSYCKVVEVIAE  312 (530)
Q Consensus       301 ~~~g~vynv~~~  312 (530)
                        .+.++++.-.
T Consensus       214 --~~~~~~~~~~  223 (227)
T PRK08219        214 --DAHITEVVVR  223 (227)
T ss_pred             --CCccceEEEe
Confidence              4677777643

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=178.61  Aligned_cols=217  Identities=16%  Similarity=0.108  Sum_probs=154.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+|+||.+|++.|+++|++|+++ .|+..+...+.+.+...             ..++.++.+|+.|.++
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   69 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-------------GGDAIAVKADVSSEED   69 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            346799999999999999999999999999999 89877766655443321             2468999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       ++|+|||++|....      +..+++..+++|+.+..++++++..    .+.++||++||.+.....
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~  149 (247)
T PRK05565         70 VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA  149 (247)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC
Confidence            877664       79999999996522      1122456688999998888777653    456789999997653221


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                            .....|+.+|.+.+.+++       ..|+++++||||++.++......................+..+|+++++
T Consensus       150 ------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  223 (247)
T PRK05565        150 ------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVV  223 (247)
T ss_pred             ------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                  123469999988776654       3699999999999977643221110000000011223457899999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.++.... ...|+++++.++.
T Consensus       224 ~~l~~~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        224 LFLASDDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHcCCccCCccCcEEEecCCc
Confidence            99997643 2457788777653

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8.8e-20  Score=183.08  Aligned_cols=219  Identities=14%  Similarity=0.131  Sum_probs=156.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.+.            ...++.++.+|+.|.+++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~i   73 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE------------SNVDVSYIVADLTKREDL   73 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988777665544321            124688999999999888


Q ss_pred             HHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++      ++|++|||||....      +..++...+++|+.+...++++    +++.+.++||++||......   
T Consensus        74 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~---  150 (263)
T PRK08339         74 ERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP---  150 (263)
T ss_pred             HHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC---
Confidence            77764      58999999985422      2234566788998876655544    55566679999999865322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----------ccceeecccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~~~~g~V  283 (530)
                         ......|+.+|.+.+.+.+.       .|++++.|.||+|.++......           .............+...
T Consensus       151 ---~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (263)
T PRK08339        151 ---IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLG  227 (263)
T ss_pred             ---CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCc
Confidence               12245699999998877652       6899999999999876321100           00000001112234567


Q ss_pred             CHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ..+|||+++++++.+.. ...|+++.+.++..
T Consensus       228 ~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        228 EPEEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             CHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence            89999999999997643 34677887776643

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.84  E-value=4.2e-20  Score=208.93  Aligned_cols=209  Identities=13%  Similarity=0.021  Sum_probs=151.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ...|+||||||+||||++|++.|.++|++|...                                     .+|++|.+.+
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------------~~~l~d~~~v  420 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------------KGRLEDRSSL  420 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------------ccccccHHHH
Confidence            455789999999999999999999999988421                                     1456777777


Q ss_pred             HHHhC--CCcEEEEcccCCCC---c--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----------
Q 009648          158 EPALG--NASVVICCIGASEK---E--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------  219 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~---~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----------  219 (530)
                      ...+.  +.|+|||||+....   +  ..+....+++|+.++.+|+++|++.|+ ++|++||..++.++           
T Consensus       421 ~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~  499 (668)
T PLN02260        421 LADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGF  499 (668)
T ss_pred             HHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCC
Confidence            77775  68999999996531   1  224567789999999999999999998 56777876654331           


Q ss_pred             Ccccccc-chhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCc----ccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          220 FPAAILN-LFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD----AYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       220 ~~~~~~~-~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~----~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                      .++.... +.+.|+.+|+++|++++.+ .++.++|..++|+.+.    ++. ...+.......+..+...++|++.+++.
T Consensus       500 ~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv-~~~~~~~~~~~vp~~~~~~~~~~~~~~~  577 (668)
T PLN02260        500 KEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFI-TKISRYNKVVNIPNSMTVLDELLPISIE  577 (668)
T ss_pred             CcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHH-HHHhccceeeccCCCceehhhHHHHHHH
Confidence            1222222 3478999999999999876 4778899999996431    111 1111111111112345778889988888


Q ss_pred             HHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          295 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      +++...   +++||++++...++.++++++.+.++
T Consensus       578 l~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        578 MAKRNL---RGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             HHHhCC---CceEEecCCCcCcHHHHHHHHHHhcC
Confidence            887533   68999999999999999999888764

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.2e-20  Score=182.35  Aligned_cols=218  Identities=16%  Similarity=0.140  Sum_probs=156.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..             ..++.++.+|+.|.+++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   73 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS-------------GGKVVPVCCDVSQHQQV   73 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999988777766554432             14688899999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~  219 (530)
                      .+++       +.+|+||||||....      +..++...+++|+.+...+++++..    .+ .++||++||.......
T Consensus        74 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  153 (253)
T PRK05867         74 TSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN  153 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC
Confidence            7766       478999999996432      1223455678999999988888753    22 3589999987542211


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                      .+    ..+..|+.+|++.+.+++.       .|++++.|+||+|.++......... .........+.+...+|||+++
T Consensus       154 ~~----~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~r~~~p~~va~~~  228 (253)
T PRK05867        154 VP----QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQ-PLWEPKIPLGRLGRPEELAGLY  228 (253)
T ss_pred             CC----CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHH-HHHHhcCCCCCCcCHHHHHHHH
Confidence            11    1235799999999988763       6899999999999877422110000 0001112234567899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++.+. ....|+++.+.++.
T Consensus       229 ~~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        229 LYLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHcCcccCCcCCCeEEECCCc
Confidence            9999754 33467888877764

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.3e-20  Score=182.87  Aligned_cols=191  Identities=15%  Similarity=0.119  Sum_probs=142.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+..              ..++.++.+|++|.+++.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~i~~   67 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK--------------AARVSVYAADVRDADALAA   67 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc--------------CCeeEEEEcCCCCHHHHHH
Confidence            46899999999999999999999999999999998766554332210              1278999999999988877


Q ss_pred             HhC-------CCcEEEEcccCCCCc-------cCCCCcchHhHHHHHHHHHH----HHHhcCCCEEEEEcCCCccCCCCc
Q 009648          160 ALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~~-------~~~~~~~~~vNv~gt~~Ll~----aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++       .+|+||||||.....       ..++...+++|+.++.++++    ++++.+.++||++||......   
T Consensus        68 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~---  144 (257)
T PRK07024         68 AAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG---  144 (257)
T ss_pred             HHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC---
Confidence            663       479999999964321       12245668899999988776    555667789999999765322   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|++.+.+++       ..|+++++||||+|.++......          ......++.+|+|+.++.
T Consensus       145 ---~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------~~~~~~~~~~~~a~~~~~  211 (257)
T PRK07024        145 ---LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----------YPMPFLMDADRFAARAAR  211 (257)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----------CCCCCccCHHHHHHHHHH
Confidence               1234569999999987764       36899999999999887421100          000123689999999999


Q ss_pred             HHhCCC
Q 009648          295 MAKNRS  300 (530)
Q Consensus       295 ll~~~~  300 (530)
                      ++.++.
T Consensus       212 ~l~~~~  217 (257)
T PRK07024        212 AIARGR  217 (257)
T ss_pred             HHhCCC
Confidence            998754

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=181.44  Aligned_cols=191  Identities=15%  Similarity=0.050  Sum_probs=141.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+                 .+++++.+|+.|.+++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~   65 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----------------GLVVGGPLDVTDPASF   65 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------------ccceEEEccCCCHHHH
Confidence            34679999999999999999999999999999999987766543311                 2578899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       .++|+||||||.....      ..++...+++|+.++.++++++    .+.+.++||++||.+....  
T Consensus        66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  143 (273)
T PRK07825         66 AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP--  143 (273)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC--
Confidence            6555       4689999999964321      1123456889999888776665    4567789999999865332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|...+.+.+       ..|+++++|+||++.++.....         ........++++|+|+.++
T Consensus       144 ----~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~~va~~~~  210 (273)
T PRK07825        144 ----VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------GGAKGFKNVEPEDVAAAIV  210 (273)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------ccccCCCCCCHHHHHHHHH
Confidence                2335679999997775543       4799999999999976532110         0011224689999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      .++.++.
T Consensus       211 ~~l~~~~  217 (273)
T PRK07825        211 GTVAKPR  217 (273)
T ss_pred             HHHhCCC
Confidence            9998865

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.7e-19  Score=186.10  Aligned_cols=210  Identities=15%  Similarity=0.095  Sum_probs=151.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+++|+||||+|+||+++++.|+++|++|++++|+.++++.+.+.++..             ..++.++.+|+.|.++
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~-------------g~~~~~v~~Dv~d~~~   71 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA-------------GGEALAVVADVADAEA   71 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-------------CCcEEEEEecCCCHHH
Confidence            345689999999999999999999999999999999988877766655432             1468899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHH----HHHHHhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~L----l~aa~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +.+|+||||||....      +..++...+++|+.+..++    ++.+++.+.++||++||...... 
T Consensus        72 v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~-  150 (334)
T PRK07109         72 VQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS-  150 (334)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC-
Confidence            87765       468999999996432      2223455688887776665    44455566689999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|+..+.+.+.         .++++++|+||.|.++.......   .+..........++.+|+|+
T Consensus       151 -----~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~---~~~~~~~~~~~~~~pe~vA~  222 (334)
T PRK07109        151 -----IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS---RLPVEPQPVPPIYQPEVVAD  222 (334)
T ss_pred             -----CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh---hccccccCCCCCCCHHHHHH
Confidence                 22346799999988766541         46999999999998874321110   01111111234578999999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      ++++++.++.    +.+.+.+.
T Consensus       223 ~i~~~~~~~~----~~~~vg~~  240 (334)
T PRK07109        223 AILYAAEHPR----RELWVGGP  240 (334)
T ss_pred             HHHHHHhCCC----cEEEeCcH
Confidence            9999998763    34555543

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.8e-19  Score=178.35  Aligned_cols=201  Identities=16%  Similarity=0.141  Sum_probs=146.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+...             ..++.++.+|+.|.+++..+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~~~~~   68 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH-------------GGEALVVPTDVSDAEACERL   68 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHHHHH
Confidence            57999999999999999999999999999999987766655444322             24788999999999888777


Q ss_pred             hC-------CCcEEEEcccCCCCc-------cCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCccc
Q 009648          161 LG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~~~-------~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      ++       ++|+||||+|.....       ..++...+++|+.++.++++.+..   .+.++||++||......     
T Consensus        69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~-----  143 (263)
T PRK06181         69 IEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG-----  143 (263)
T ss_pred             HHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC-----
Confidence            64       689999999864321       111345589999999999999853   24579999999765322     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                       ......|+.+|...+.+++.       .++++++++||++.++...... ...............+++++|+|++++.+
T Consensus       144 -~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~  222 (263)
T PRK06181        144 -VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPA  222 (263)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHH
Confidence             22346799999998877652       6899999999999876432110 00011111111123579999999999999


Q ss_pred             HhCCC
Q 009648          296 AKNRS  300 (530)
Q Consensus       296 l~~~~  300 (530)
                      +....
T Consensus       223 ~~~~~  227 (263)
T PRK06181        223 IARRK  227 (263)
T ss_pred             hhCCC
Confidence            98643

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.7e-19  Score=179.40  Aligned_cols=219  Identities=15%  Similarity=0.103  Sum_probs=153.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++|||||+|+||+++++.|+++|++|++++|+.+ ..+.+.+.+...             ..++.++.+|+.|.++
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   72 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA-------------GRRAIQIAADVTSKAD   72 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            56789999999999999999999999999999999764 344444433322             2468889999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.+++       +++|+||||||....      ...++...+++|+.++..+++++.    +.+.++||++||.......
T Consensus        73 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  152 (254)
T PRK06114         73 LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN  152 (254)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence            77666       357999999996432      223345678899999877776653    4556799999997643211


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                       +   ......|+.+|++.+.+++.       .|+++++|+||++.++....... ............+.....+|||++
T Consensus       153 -~---~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~  228 (254)
T PRK06114        153 -R---GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGP  228 (254)
T ss_pred             -C---CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence             1   01235799999998877652       68999999999998875321110 000000111223455789999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++.+. ....|+++.+.++.
T Consensus       229 ~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        229 AVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             HHHHcCccccCcCCceEEECcCE
Confidence            99999754 33467788777653

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=1.1e-19  Score=183.70  Aligned_cols=227  Identities=13%  Similarity=0.068  Sum_probs=153.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+||||++|+++|+++|++|++++|+.+....+.+.+...             ..++.++.+|+.|.+++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~~   70 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-------------GAEVLGVRTDVSDAAQV   70 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHHH
Confidence            44679999999999999999999999999999999887666554443321             24688899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCC------CEEEEEcCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKV------NHFIMVSSLG  214 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv------~r~V~iSS~~  214 (530)
                      .++++       ++|+||||||....      ...++...+++|+.++.+++++    +.+.+.      ++||++||.+
T Consensus        71 ~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  150 (287)
T PRK06194         71 EALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA  150 (287)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChh
Confidence            87774       57999999996432      1223445688999999998777    444443      5899999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccC---------
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQED---------  276 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~---------  276 (530)
                      ....      ......|+.+|++.+.+++.         .+++++.+.||+|.++...........+....         
T Consensus       151 ~~~~------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (287)
T PRK06194        151 GLLA------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIA  224 (287)
T ss_pred             hccC------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHH
Confidence            6332      12345699999999887752         35888999999996653221111111111100         


Q ss_pred             ------cccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          277 ------TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       277 ------~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                            ....+.++++|+|+.++.++....     .+.....  ....++...+..+.+.
T Consensus       225 ~~~~~~~~~~~~~s~~dva~~i~~~~~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~  277 (287)
T PRK06194        225 QAMSQKAVGSGKVTAEEVAQLVFDAIRAGR-----FYIYSHP--QALASVRTRMEDIVQQ  277 (287)
T ss_pred             HHHHHhhhhccCCCHHHHHHHHHHHHHcCC-----eEEEcCH--HHHHHHHHHHHHHHHh
Confidence                  011134789999999999886443     2222222  2234555555555544

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.7e-20  Score=182.08  Aligned_cols=210  Identities=21%  Similarity=0.173  Sum_probs=150.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.....                      ..++.++.+|+.|.+++
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~   64 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----------------------PEGVEFVAADLTTAEGC   64 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----------------------CCceeEEecCCCCHHHH
Confidence            45789999999999999999999999999999999864210                      14688999999998877


Q ss_pred             HHHh-------CCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          158 EPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      .+++       +++|+||||||...        .+..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  144 (260)
T PRK06523         65 AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP  144 (260)
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence            6544       56899999999532        122234566889999988776654    4556679999999765322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----ccceee---------cccCc
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----THNITL---------SQEDT  277 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----~~~~~~---------~~~~~  277 (530)
                      .     ......|+.+|.+++.+++.       .|+++++|+||+|.++......     ......         .....
T Consensus       145 ~-----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06523        145 L-----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI  219 (260)
T ss_pred             C-----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence            1     12356799999999877652       5899999999999987532100     000000         00111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ..+.....+|||+++++++.+. ....|+++.+.++..
T Consensus       220 p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             ccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCcc
Confidence            2234568899999999999764 334678888888754

>PRK07985 oxidoreductase; Provisional

Probab=99.84  E-value=1.4e-19  Score=184.87  Aligned_cols=217  Identities=17%  Similarity=0.130  Sum_probs=153.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++++|||||+|+||+++++.|+++|++|+++.|+.  ...+.+.+.+...             ..++.++.+|++|.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~  113 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-------------GRKAVLLPGDLSDEK  113 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-------------CCeEEEEEccCCCHH
Confidence            4568999999999999999999999999999988754  2334443322211             146888999999988


Q ss_pred             hHHHHh-------CCCcEEEEcccCCC-------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~-------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~  219 (530)
                      ++.+++       +++|++|||||...       .+..++...+++|+.++.++++++...  ..++||++||...... 
T Consensus       114 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~-  192 (294)
T PRK07985        114 FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP-  192 (294)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC-
Confidence            776655       46899999998532       122345677999999999999998753  2369999999866322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-ccc-eeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-~~~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+++       ..|+++++|+||+|+++...... ... ..........+.+...+|||+
T Consensus       193 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~  267 (294)
T PRK07985        193 -----SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAP  267 (294)
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence                 1234579999999887765       26999999999999988531110 000 000011122334578999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++++.+.. ...|.++.+.++.
T Consensus       268 ~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        268 VYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             HHHhhhChhcCCccccEEeeCCCe
Confidence            9999997643 3457888877764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.84  E-value=1.3e-19  Score=180.53  Aligned_cols=217  Identities=14%  Similarity=0.094  Sum_probs=154.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+|+||+++++.|+++|++|++++|+ .+.+.+.+.+.+.             ..++.++.+|+.|.++
T Consensus        12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   77 (258)
T PRK06935         12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE-------------GRKVTFVQVDLTKPES   77 (258)
T ss_pred             cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            3567899999999999999999999999999999998 4455544433322             2468899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       .+|+||||+|....      ...++...+++|+.+..++++++.    +.+.++||++||...... 
T Consensus        78 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  156 (258)
T PRK06935         78 AEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG-  156 (258)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC-
Confidence            877664       68999999996432      122345668899999777776654    456679999999865322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee--ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~--~~~~~~~~~g~V~v~DVA~  290 (530)
                           ...+..|+.+|++.+.+++.       .|+++++|+||+|.++...........  ........+.+...+|+|+
T Consensus       157 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (258)
T PRK06935        157 -----GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMG  231 (258)
T ss_pred             -----CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 12245799999999887652       589999999999987643211000000  0001122345688999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.+++.+.. ...|.++.+.++.
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        232 AAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             HHHHHcChhhcCCCCCEEEECCCe
Confidence            9999997543 3467888877763

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2e-19  Score=178.20  Aligned_cols=217  Identities=13%  Similarity=0.118  Sum_probs=155.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++||||||+|+||++++++|+++|++|++++|+..+.+.+.+.+...             ..++.++++|+.|.++
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   71 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA-------------GGKAEALACHIGEMEQ   71 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHHH
Confidence            355789999999999999999999999999999999987777666554432             1457889999999888


Q ss_pred             HHHHh-------CCCcEEEEcccCCC-------CccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~-------~~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +..++       ..+|+||||||...       ....++...+++|+.+...+++++    ++.+.++||++||......
T Consensus        72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  151 (252)
T PRK07035         72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP  151 (252)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence            77665       35899999998532       112223457889999988877666    4456679999999754322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-ccee-ecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                            ......|+.+|++.+.+++.       .|++++.|+||.|.++....... .... ........+.....+|+|
T Consensus       152 ------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  225 (252)
T PRK07035        152 ------GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMA  225 (252)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHH
Confidence                  23456799999999988763       58999999999997763211100 0000 000111233467899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++++++.+.. ...|+++.+.++
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        226 GAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHhCccccCccCCEEEeCCC
Confidence            99999997653 235777777665

>PRK06196 oxidoreductase; Provisional

Probab=99.84  E-value=1.9e-19  Score=185.38  Aligned_cols=206  Identities=16%  Similarity=0.133  Sum_probs=143.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                 .+++++.+|+.|.+++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-----------------~~v~~~~~Dl~d~~~v   86 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-----------------DGVEVVMLDLADLESV   86 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------------hhCeEEEccCCCHHHH
Confidence            35689999999999999999999999999999999987666544321                 2478899999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc-
Q 009648          158 EPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP-  221 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~-  221 (530)
                      ++++       .++|+||||||....    ...++...+++|+.++.+++++    +++.+.++||++||.+....... 
T Consensus        87 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~  166 (315)
T PRK06196         87 RAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW  166 (315)
T ss_pred             HHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc
Confidence            7766       468999999996422    2223456688999996666554    45556679999999754221100 


Q ss_pred             -----cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccce----eecccCcccC-CCCC
Q 009648          222 -----AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI----TLSQEDTLFG-GQVS  284 (530)
Q Consensus       222 -----~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~----~~~~~~~~~~-g~V~  284 (530)
                           .....++..|+.+|.+.+.+.+       ..|+++++||||+|.++..........    .+........ ...+
T Consensus       167 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (315)
T PRK06196        167 DDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKT  246 (315)
T ss_pred             cccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCC
Confidence                 0123345679999999887654       258999999999999885422111000    0000001111 2457


Q ss_pred             HHHHHHHHHHHHhCCC
Q 009648          285 NLQVAELLACMAKNRS  300 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~  300 (530)
                      .+|+|..+++++..+.
T Consensus       247 ~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        247 PAQGAATQVWAATSPQ  262 (315)
T ss_pred             HhHHHHHHHHHhcCCc
Confidence            8999999999997654

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.5e-19  Score=177.89  Aligned_cols=216  Identities=15%  Similarity=0.131  Sum_probs=152.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+|+||+++++.|+++|++|+++.|+.. ....+.+.+.+.             ..++.++.+|+.|.++
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   69 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-------------GGRAIAVQADVADAAA   69 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence            45689999999999999999999999999998887653 334443333322             2578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~  221 (530)
                      +.++++       ++|+||||||....      ...++...+++|+.++.++++++.+.  ..++||++||.+....   
T Consensus        70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---  146 (245)
T PRK12937         70 VTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP---  146 (245)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC---
Confidence            877774       68999999996432      12234456889999999999888754  3358999998765322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ......|+.+|.+++.+++.       .|+++++++||++.++.......... ...........+.+++|+|++++
T Consensus       147 ---~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  223 (245)
T PRK12937        147 ---LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVA  223 (245)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence               23356799999999987753       58999999999997764211000000 00001122334578999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++.+.. ...|.++++.++
T Consensus       224 ~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        224 FLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHcCccccCccccEEEeCCC
Confidence            9997653 235778887654

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=2.4e-19  Score=178.05  Aligned_cols=217  Identities=17%  Similarity=0.148  Sum_probs=157.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++|+||||+|+||+++++.|+++|++|++++|+.++...+.+++++.             ..++.++.+|+.|.++
T Consensus         8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   74 (256)
T PRK06124          8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA-------------GGAAEALAFDIADEEA   74 (256)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEccCCCHHH
Confidence            356789999999999999999999999999999999987777665555432             1468899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       .+|+||||+|....      ...++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        75 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-  153 (256)
T PRK06124         75 VAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA-  153 (256)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC-
Confidence            776663       57999999996432      112344568899999998886664    356789999999765322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-cccee-ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|.+.+.+++.       .|++++.|+||.+.++...... ..... ........+.+++.+|+++
T Consensus       154 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  228 (256)
T PRK06124        154 -----RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAG  228 (256)
T ss_pred             -----CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 12345799999998877652       5899999999999987532110 00000 0011122346789999999


Q ss_pred             HHHHHHhCCCC-CCCcEEEEeCC
Q 009648          291 LLACMAKNRSL-SYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~~-~~g~vynv~~~  312 (530)
                      ++++++.++.. ..|+.+.+.++
T Consensus       229 ~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        229 AAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHHHcCcccCCcCCCEEEECCC
Confidence            99999987642 34666666554

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.84  E-value=1.8e-19  Score=177.76  Aligned_cols=215  Identities=16%  Similarity=0.134  Sum_probs=147.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++|+||||||+|+||+++++.|+++|++|+++.+ +..+.....+.+...             ..++.++.+|+.|.+++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   68 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL-------------GFDFIASEGNVGDWDST   68 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            3578999999999999999999999999988654 333333333322211             24678889999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       +++|+||||||....      +..++...+++|+.++.+++++    +.+.+.++||++||......  
T Consensus        69 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--  146 (246)
T PRK12938         69 KAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG--  146 (246)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC--
Confidence            7665       468999999996432      2223456688999997776555    44567789999999754321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|.+.+.+++       ..|+++++|+||++.++.........+...............+|++++++
T Consensus       147 ----~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (246)
T PRK12938        147 ----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA  222 (246)
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence                1235679999998877654       26899999999999887532111000000001112233567899999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~  312 (530)
                      +++.+. ....++++.+.++
T Consensus       223 ~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        223 WLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHcCcccCCccCcEEEECCc
Confidence            999764 3346788887765

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=179.10  Aligned_cols=215  Identities=15%  Similarity=0.155  Sum_probs=148.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||+|+||.+++++|+++|++|+++.| +.++...+.+.+...             ..++.++.+|+.|.+++.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~~~   68 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ-------------GGEALAVAADVADEADVL   68 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC-------------CCcEEEEEeccCCHHHHH
Confidence            468999999999999999999999999988764 444444443333321             246788999999998888


Q ss_pred             HHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc----C---CCEEEEEcCCCccC
Q 009648          159 PALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNK  217 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g---v~r~V~iSS~~v~~  217 (530)
                      ++++       .+|+||||||....       ...++...+++|+.++.++++++.+.    +   -++||++||.+...
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~  148 (248)
T PRK06123         69 RLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL  148 (248)
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC
Confidence            7774       68999999996432       11223466999999999998887643    1   24799999975532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                      . .+    ..+..|+.+|.+.+.+++.       .|+++++||||+|+++........... ............+++|++
T Consensus       149 ~-~~----~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a  223 (248)
T PRK06123        149 G-SP----GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVA  223 (248)
T ss_pred             C-CC----CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence            2 11    1123599999999987652       489999999999999853211100000 000111122235789999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++++++.... ...|++|++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        224 RAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHhCccccCccCCEEeecCC
Confidence            99999997643 245788988764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.2e-19  Score=180.54  Aligned_cols=216  Identities=14%  Similarity=0.072  Sum_probs=154.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||+++++.|+++|++|++++|+.++. .+.+.+...             ..++.++.+|+.|.+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   70 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL-------------QPRAEFVQVDLTDDAQC   70 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc-------------CCceEEEEccCCCHHHH
Confidence            5578999999999999999999999999999999998765 443333322             24689999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCcc-----CCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCcc
Q 009648          158 EPALG-------NASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~~-----~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ..+++       ++|+||||||......     .++...+++|+.+..++++++..   .+.++||++||......    
T Consensus        71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----  146 (258)
T PRK08628         71 RDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG----  146 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC----
Confidence            77774       6899999999532211     23455688999999998888753   23469999999765322    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccc-ccc---cceeec--ccCccc-CCCCCHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KET---HNITLS--QEDTLF-GGQVSNLQV  288 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~-~~~---~~~~~~--~~~~~~-~g~V~v~DV  288 (530)
                        ...+..|+.+|+..+.+++.       .|++++.||||+|+++.... ...   ......  ...... ..+++.+|+
T Consensus       147 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  224 (258)
T PRK08628        147 --QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEI  224 (258)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHH
Confidence              12356799999999887763       58999999999999975321 000   000000  001111 246889999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |+++++++.... ...++.|.+.++.
T Consensus       225 a~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        225 ADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             HHHHHHHhChhhccccCceEEecCCc
Confidence            999999997652 2356777776553

>PRK12743 oxidoreductase; Provisional

Probab=99.84  E-value=1.5e-19  Score=180.02  Aligned_cols=215  Identities=17%  Similarity=0.161  Sum_probs=152.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||+|+||+++++.|+++|++|+++.|+ ....+.+.+.+...             ..+++++.+|+.|.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~   68 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-------------GVRAEIRQLDLSDLPEGA   68 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-------------CCceEEEEccCCCHHHHH
Confidence            5689999999999999999999999999988764 44454444433322             257899999999998876


Q ss_pred             HHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCCCC
Q 009648          159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~~~  220 (530)
                      .++       ..+|+||||+|....      +..++...+++|+.+..++++++...    + .++||++||......  
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~--  146 (256)
T PRK12743         69 QALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP--  146 (256)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC--
Confidence            666       358999999996432      12234566899999999999887643    2 358999999764322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ..+...|+.+|.+.+.+++       ..|++++.|+||+++++...................+...+.+|+|++++
T Consensus       147 ----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  222 (256)
T PRK12743        147 ----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVA  222 (256)
T ss_pred             ----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                2345689999999887765       25899999999999987532111000000011122234568999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.... ...|.++.+.++.
T Consensus       223 ~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        223 WLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHhCccccCcCCcEEEECCCc
Confidence            9987643 2357777777664

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.8e-19  Score=178.63  Aligned_cols=214  Identities=13%  Similarity=0.064  Sum_probs=153.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+...... ...+.               ..++.++.+|+.|.+++
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~-~~~~~---------------~~~~~~~~~Dl~~~~~~   76 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEV-AAQLL---------------GGNAKGLVCDVSDSQSV   76 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhh---------------CCceEEEEecCCCHHHH
Confidence            457899999999999999999999999999999998753222 11110               14577899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||+|.....      ..++...+++|+.++.++++++..    .+.++||++||.+... + 
T Consensus        77 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~-  154 (255)
T PRK06841         77 EAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVV-A-  154 (255)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhcc-C-
Confidence            77663       679999999965321      123345689999999999988764    4667999999976522 1 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ceeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|.+.+.+++.       .|++++.|+||+|.++........ ...........+.+.+.+|+|+++
T Consensus       155 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (255)
T PRK06841        155 ----LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAA  230 (255)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                12345799999998877652       589999999999988743211000 000001122234578999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++.+.. ...|+++.+.++.
T Consensus       231 ~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        231 LFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HHHcCccccCccCCEEEECCCc
Confidence            99997653 2357888877764

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.6e-19  Score=178.09  Aligned_cols=213  Identities=15%  Similarity=0.142  Sum_probs=149.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++|+||||+|+||++++++|+++|++|++++|+.++...+.+++                ..++.++++|+.|.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----------------GESALVIRADAGDVAAQ   67 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----------------CCceEEEEecCCCHHHH
Confidence            34679999999999999999999999999999999876655443211                14678899999998776


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ..++       .++|+||||||....      +..++...+++|+.++.++++++...  ..+++|++||.... ++.  
T Consensus        68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-~~~--  144 (249)
T PRK06500         68 KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-IGM--  144 (249)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-cCC--
Confidence            5544       468999999986432      12234567899999999999999752  33578888886432 221  


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-cc-ce--e--ecccCcccCCCCCHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-TH-NI--T--LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~-~~--~--~~~~~~~~~g~V~v~DVA  289 (530)
                         .....|+.+|++.|.+++.       .|++++++|||.++++...... .. ..  .  ..........+.+.+|+|
T Consensus       145 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  221 (249)
T PRK06500        145 ---PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIA  221 (249)
T ss_pred             ---CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence               2346799999999988742       5899999999999987421100 00 00  0  000111122346899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++++++.+.. +..+..+.+.++
T Consensus       222 ~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        222 KAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHcCccccCccCCeEEECCC
Confidence            99999987543 334666666655

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.84  E-value=2.4e-19  Score=177.09  Aligned_cols=214  Identities=15%  Similarity=0.108  Sum_probs=150.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||++++++|+++|++|++++|+..  ..+.+.+.+.             ..++.++.+|++|.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   67 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-------------GRRFLSLTADLSDIEAI   67 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-------------CCceEEEECCCCCHHHH
Confidence            45789999999999999999999999999999999752  2333333222             24688999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~  219 (530)
                      ..++       .++|+||||||.....      ..++...+++|+.+..++++++..    .+ .++||++||.......
T Consensus        68 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  147 (248)
T TIGR01832        68 KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG  147 (248)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence            7655       4689999999964321      123455688999999999888753    33 4699999997553221


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee--ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~--~~~~~~~~~g~V~v~DVA~  290 (530)
                            .....|+.+|++.+.+++.       .|+++++|+||+|.++...........  ........+.+++.+|+|+
T Consensus       148 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  221 (248)
T TIGR01832       148 ------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGG  221 (248)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  1234699999999887753       589999999999988743211100000  0001112346789999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++++.+.. ...|.++.+.++
T Consensus       222 ~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       222 PAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHHcCccccCcCCcEEEeCCC
Confidence            9999997643 234666666554

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.5e-19  Score=181.84  Aligned_cols=197  Identities=16%  Similarity=0.147  Sum_probs=146.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+++|+||||+|+||+++++.|+++|++|++++|+.++++.+.+.+...             ..++.++.+|+.|.++
T Consensus        37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~-------------~~~~~~~~~Dl~d~~~  103 (293)
T PRK05866         37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA-------------GGDAMAVPCDLSDLDA  103 (293)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            456689999999999999999999999999999999988777665544322             1467899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCcc--------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccC
Q 009648          157 IEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~~--------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~  217 (530)
                      +.++++       ++|+||||||......        .++...+++|+.++.++++++.    +.+.++||++||.++..
T Consensus       104 v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  183 (293)
T PRK05866        104 VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS  183 (293)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence            877765       7899999999643211        1234568899999888777654    56778999999976532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      ..     ......|+.+|++.+.+++.       .|+++++|+||.|-++......         .......++.+|+|+
T Consensus       184 ~~-----~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~---------~~~~~~~~~pe~vA~  249 (293)
T PRK05866        184 EA-----SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK---------AYDGLPALTADEAAE  249 (293)
T ss_pred             CC-----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc---------cccCCCCCCHHHHHH
Confidence            11     12345799999998877652       5899999999998776321100         000112478999999


Q ss_pred             HHHHHHhCCC
Q 009648          291 LLACMAKNRS  300 (530)
Q Consensus       291 ai~~ll~~~~  300 (530)
                      .++.++.++.
T Consensus       250 ~~~~~~~~~~  259 (293)
T PRK05866        250 WMVTAARTRP  259 (293)
T ss_pred             HHHHHHhcCC
Confidence            9999998754

>PRK08589 short chain dehydrogenase; Validated

Probab=99.84  E-value=3.7e-19  Score=179.18  Aligned_cols=215  Identities=17%  Similarity=0.135  Sum_probs=152.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+ ++...+.+.+.+.             ..++.++.+|+.|.+++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   69 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN-------------GGKAKAYHVDISDEQQV   69 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc-------------CCeEEEEEeecCCHHHH
Confidence            457899999999999999999999999999999999 6666655544322             24688999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC--c-----cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK--E-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~--~-----~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ..++       +.+|+||||||....  .     ..++...+++|+.+...+++++.    +.+ ++||++||...... 
T Consensus        70 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-  147 (272)
T PRK08589         70 KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA-  147 (272)
T ss_pred             HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC-
Confidence            7665       358999999996421  1     11234567899998877766654    344 69999999765322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccc------ee-ecccCcccCCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN------IT-LSQEDTLFGGQVS  284 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~------~~-~~~~~~~~~g~V~  284 (530)
                           ......|+.+|.+.+.+++.       .|++++.|+||.|.++...... ...      +. ........+.+.+
T Consensus       148 -----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (272)
T PRK08589        148 -----DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGK  222 (272)
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcC
Confidence                 12245799999999888763       6899999999999876422110 000      00 0000112334578


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .+|+|+++++++.+. ....|+++.+.++.
T Consensus       223 ~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        223 PEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            999999999999754 23467788777664

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.7e-19  Score=176.91  Aligned_cols=193  Identities=18%  Similarity=0.171  Sum_probs=141.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++||||||+|+||++++++|+++| ++|++++|+.++ ++.+.+.+...         +   ..+++++.+|+.|.++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~---------~---~~~v~~~~~D~~~~~~   74 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA---------G---ASSVEVIDFDALDTDS   74 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc---------C---CCceEEEEecCCChHH
Confidence            46789999999999999999999995 999999999875 66665544432         1   1378999999999887


Q ss_pred             HHHHh------CCCcEEEEcccCCCCccCCCC------cchHhHHHHHHH----HHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL------GNASVVICCIGASEKEVFDIT------GPYRIDFQATKN----LVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~------~~vD~VI~~Ag~~~~~~~~~~------~~~~vNv~gt~~----Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +.+++      +++|++|||+|........+.      ..+++|+.++.+    +++.+++.+.++||++||......  
T Consensus        75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--  152 (253)
T PRK07904         75 HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--  152 (253)
T ss_pred             HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--
Confidence            65544      379999999987533211111      348999988776    566677777889999999864221  


Q ss_pred             ccccccchhHHHHHHHHHHHHH-------HHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++...+.       +..|+++++||||++.++......        .   ....++++|+|+.++
T Consensus       153 ----~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~--------~---~~~~~~~~~~A~~i~  217 (253)
T PRK07904        153 ----RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK--------E---APLTVDKEDVAKLAV  217 (253)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC--------C---CCCCCCHHHHHHHHH
Confidence                122346999999877543       347999999999999875321100        0   112478999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      .++.++.
T Consensus       218 ~~~~~~~  224 (253)
T PRK07904        218 TAVAKGK  224 (253)
T ss_pred             HHHHcCC
Confidence            9998875

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2e-19  Score=178.33  Aligned_cols=217  Identities=11%  Similarity=0.075  Sum_probs=156.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||++++++|+++|++|++++|+.++...+.+.+.+.             ..+++++.+|+.|.+++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~i   71 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA-------------GGEALFVACDVTRDAEV   71 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHHHH
Confidence            45689999999999999999999999999999999988766665544332             25689999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      ..+++       .+|+||||+|....       +..++...+++|+.++.++++++    .+.+.++||++||...... 
T Consensus        72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~-  150 (253)
T PRK06172         72 KALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA-  150 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-
Confidence            77664       56999999996421       12234556889999988776654    3455679999999765322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--ccee-ecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                           ...+..|+.+|++.+.+++.       .|+++++|+||+|.++.......  .... ........+.....+|++
T Consensus       151 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia  225 (253)
T PRK06172        151 -----APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVA  225 (253)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHH
Confidence                 23356799999999877752       58999999999997764321100  0000 000112223457899999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +.+++++.+. ....|+++.+.++.
T Consensus       226 ~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        226 SAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHHhCccccCcCCcEEEECCCc
Confidence            9999999764 33568888887764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.83  E-value=3.7e-19  Score=176.94  Aligned_cols=217  Identities=12%  Similarity=0.132  Sum_probs=157.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.+..+.+...++..             ..++.++.+|++|.+++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~i   75 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------------GGQAFACRCDITSEQEL   75 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999987776665544322             14688899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc-----cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~-----~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .+++       .++|+||||||.....     ..++...+++|+.++.++++++.    +.+.++||++||......   
T Consensus        76 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---  152 (255)
T PRK06113         76 SALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK---  152 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC---
Confidence            7665       3579999999964321     12234458899999999999986    344569999999765321   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceee-cccCcccCCCCCHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL-SQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~-~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ......|+.+|++.+.+++.       .|+++++|+||++.++............ .........+...+|++++++
T Consensus       153 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  229 (255)
T PRK06113        153 ---NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence               22345799999999988753       6899999999999876422100000000 011112234578999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.... ...|+++++.++.
T Consensus       230 ~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        230 FLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             HHcCccccCccCCEEEECCCc
Confidence            9997542 3458889888875

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3e-19  Score=177.87  Aligned_cols=216  Identities=15%  Similarity=0.148  Sum_probs=148.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch----hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~----k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .++++||||||+|+||+++++.|+++|++|++++++..    ..+.+.+.++..             ..+++++.+|++|
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~   72 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-------------GAKAVAFQADLTT   72 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-------------CCcEEEEecCcCC
Confidence            45689999999999999999999999999887776432    233332222211             2468899999999


Q ss_pred             HhhHHHHhC-------CCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEE-cCCCccC
Q 009648          154 RVQIEPALG-------NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMV-SSLGTNK  217 (530)
Q Consensus       154 ~~sl~~a~~-------~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~i-SS~~v~~  217 (530)
                      .+++.++++       ++|+||||||...      ....++...+++|+.++..+++++...  ..+++|++ ||.... 
T Consensus        73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~-  151 (257)
T PRK12744         73 AAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA-  151 (257)
T ss_pred             HHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-
Confidence            988877663       6899999999632      122234567889999999999998754  23467766 443221 


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc---eee-cccCcc--cCCCCC
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN---ITL-SQEDTL--FGGQVS  284 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~---~~~-~~~~~~--~~g~V~  284 (530)
                      +      ...+..|+.+|++.|.+++.       .|+++++|+||++.++.........   ... ......  ..++.+
T Consensus       152 ~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (257)
T PRK12744        152 F------TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTD  225 (257)
T ss_pred             c------CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCC
Confidence            1      12245799999999988763       4799999999999876421110000   000 000111  125688


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      .+|+|+++++++.+.....|+++++.++.
T Consensus       226 ~~dva~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        226 IEDIVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             HHHHHHHHHHhhcccceeecceEeecCCc
Confidence            99999999999986443458899888764

>PRK08643 acetoin reductase; Validated

Probab=99.83  E-value=3.5e-19  Score=176.88  Aligned_cols=214  Identities=17%  Similarity=0.124  Sum_probs=152.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+.++...+...+...             ..++.++.+|+.|.+++.+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~~   68 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD-------------GGKAIAVKADVSDRDQVFA   68 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHHHHH
Confidence            578999999999999999999999999999999987776665544322             1468889999999988777


Q ss_pred             HhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCCCc
Q 009648          160 ALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~~~  221 (530)
                      +++       ++|+||||||.....      ..++...+++|+.++..+++++.+    .+ .++||++||..... +. 
T Consensus        69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~-  146 (256)
T PRK08643         69 AVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV-GN-  146 (256)
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc-CC-
Confidence            663       689999999864321      122345688999998877776653    22 35899999975532 21 


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc------c---cc--eeecccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE------T---HN--ITLSQEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~------~---~~--~~~~~~~~~~~g~V  283 (530)
                          .....|+.+|+..+.+++       ..|++++.|+||++.++......      .   ..  ..........+.+.
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK08643        147 ----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS  222 (256)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence                224579999999887665       26899999999999887421100      0   00  00001112234567


Q ss_pred             CHHHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ..+|+|+++.+++.+.. ...|.++.+.++
T Consensus       223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        223 EPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            89999999999997643 345777777665

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.83  E-value=2.2e-19  Score=176.46  Aligned_cols=215  Identities=16%  Similarity=0.128  Sum_probs=150.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+.. ....+.....             ....++.++.+|+.|.+++.
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~~v~   68 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYG-------------FTEDQVRLKELDVTDTEECA   68 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhh-------------ccCCeEEEEEcCCCCHHHHH
Confidence            358999999999999999999999999999999854 1222111110             11256899999999998877


Q ss_pred             HHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       .+|+||||+|....      ...++...+++|+.++.+++++    +++.+.++||++||......   
T Consensus        69 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---  145 (245)
T PRK12824         69 EALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---  145 (245)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC---
Confidence            7663       58999999986422      2223456688999998887554    45566789999999765321   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|..+|.+.+.+++       ..|+++++++||++.++...................+.....+|+++++.+
T Consensus       146 ---~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  222 (245)
T PRK12824        146 ---QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAF  222 (245)
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence               1234579999998876654       358999999999998874322111110000111223345689999999999


Q ss_pred             HHhCC-CCCCCcEEEEeCCC
Q 009648          295 MAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++... ....|+++++.++.
T Consensus       223 l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        223 LVSEAAGFITGETISINGGL  242 (245)
T ss_pred             HcCccccCccCcEEEECCCe
Confidence            98653 23468899998875

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.9e-19  Score=180.63  Aligned_cols=201  Identities=11%  Similarity=0.061  Sum_probs=144.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++.+.+...+.+.             ..++.++.+|+.|.+++..+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~~~~   67 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA-------------GGDGFYQRCDVRDYSQLTAL   67 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEccCCCHHHHHHH
Confidence            47999999999999999999999999999999988777665554432             25688999999999887776


Q ss_pred             hC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCccc
Q 009648          161 LG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      ++       ++|+||||||......      .++...+++|+.++.+++++    +++.+.++||++||......     
T Consensus        68 ~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----  142 (270)
T PRK05650         68 AQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----  142 (270)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----
Confidence            63       6899999999643221      22344578998887776655    55667789999999865322     


Q ss_pred             cccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccce--eecccCcccCCCCCHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                       ......|+.+|++.+.+.+       ..|+++++|+||++.++..........  ............++++|+|+.++.
T Consensus       143 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~  221 (270)
T PRK05650        143 -GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQ  221 (270)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence             2335679999998776653       268999999999998874321110000  000011112345899999999999


Q ss_pred             HHhCCC
Q 009648          295 MAKNRS  300 (530)
Q Consensus       295 ll~~~~  300 (530)
                      ++.++.
T Consensus       222 ~l~~~~  227 (270)
T PRK05650        222 QVAKGE  227 (270)
T ss_pred             HHhCCC
Confidence            998753

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.83  E-value=2.9e-19  Score=216.92  Aligned_cols=242  Identities=22%  Similarity=0.168  Sum_probs=170.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC----CeEEEEECCchhHHHHH---HHHHHhhhhccccccCCCCCCCeEEEEecC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLV---QSVKQMKLDGELANKGIQPVEMLELVECDL  151 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k~~~l~---~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl  151 (530)
                      ..++|||||||||||++|++.|+++|    ++|+++.|+......+.   +.+..+.+.      ......+++++.+|+
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~------~~~~~~~i~~~~gDl 1043 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIW------DEEWASRIEVVLGDL 1043 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCC------chhhhcceEEEeccC
Confidence            35799999999999999999999987    89999999865443322   111111110      001124799999999


Q ss_pred             CC------HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC-------
Q 009648          152 EK------RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-------  218 (530)
Q Consensus       152 ~d------~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~-------  218 (530)
                      .+      .+.+..+..++|+|||||+..... .........|+.|+.+++++|++.++++|||+||.++...       
T Consensus      1044 ~~~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443      1044 SKEKFGLSDEKWSDLTNEVDVIIHNGALVHWV-YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred             CCccCCcCHHHHHHHHhcCCEEEECCcEecCc-cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchh
Confidence            74      455677778999999999865422 2223345689999999999999999999999999866421       


Q ss_pred             ---------CC-ccc-----cccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCccccc-ccce---------
Q 009648          219 ---------GF-PAA-----ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKE-THNI---------  270 (530)
Q Consensus       219 ---------~~-~~~-----~~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~~~~~-~~~~---------  270 (530)
                               +. +..     ......+|+.+|+.+|.++..   .|++++|+|||.|||+...... ...+         
T Consensus      1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~ 1202 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCI 1202 (1389)
T ss_pred             hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHH
Confidence                     00 000     112335699999999999864   6899999999999998532111 0000         


Q ss_pred             eecc--cCcccCCCCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhc
Q 009648          271 TLSQ--EDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKI  327 (530)
Q Consensus       271 ~~~~--~~~~~~g~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v  327 (530)
                      .++.  ......++++++|+|++++.++.++.. ..+.+||+.++...++.++.+.+.+.
T Consensus      1203 ~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1203 QLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            0000  111124679999999999999876532 23568999999888888888888764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=4e-19  Score=177.84  Aligned_cols=218  Identities=13%  Similarity=0.104  Sum_probs=157.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...++++|||||+|+||++++++|+++|++|+++.|+.++.+.+.+.+...             ..++.++.+|+.|.++
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   73 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL-------------GIEAHGYVCDVTDEDG   73 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            345789999999999999999999999999999999988777665544322             1468899999999998


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       ..+|+||||||....      ...++...+++|+.+...+++++.    +.+.++||++||..... +
T Consensus        74 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~  152 (265)
T PRK07097         74 VQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-G  152 (265)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-C
Confidence            87777       358999999996432      222345668899999887777654    45667999999975432 2


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----c--cee-ecccCcccCCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----H--NIT-LSQEDTLFGGQVS  284 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~--~~~-~~~~~~~~~g~V~  284 (530)
                           ...+..|+.+|.+.+.+++.       .|++++.|+||++.++.......     .  ... ........+.+..
T Consensus       153 -----~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (265)
T PRK07097        153 -----RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGD  227 (265)
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcC
Confidence                 23356799999998877763       68999999999998874321100     0  000 0000111234577


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .+|+|+.+++++.+. ....++++.+.++.
T Consensus       228 ~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        228 PEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            899999999999863 33467777777764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=3.1e-19  Score=176.02  Aligned_cols=215  Identities=13%  Similarity=0.102  Sum_probs=152.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||+.+++.|+++|++|++++|+..+...+.+.+...             ..++.++.+|+.|.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   69 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL-------------GTEVRGYAANVTDEEDV   69 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHHHH
Confidence            45679999999999999999999999999999999987776655544322             25788999999998877


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc---------------cCCCCcchHhHHHHHHHHHHHHH----hc-CCCEEEEE
Q 009648          158 EPAL-------GNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMV  210 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~---------------~~~~~~~~~vNv~gt~~Ll~aa~----~~-gv~r~V~i  210 (530)
                      .+++       +.+|+||||+|.....               ..++...+++|+.++..+++++.    +. ..++||++
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~  149 (253)
T PRK08217         70 EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINI  149 (253)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence            6655       3579999999953321               11223457889999887766544    22 33579999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCC
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V  283 (530)
                      ||.+.  ++.     .....|+.+|.+.+.+++       ..|++++.++||++.++.......................
T Consensus       150 ss~~~--~~~-----~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  222 (253)
T PRK08217        150 SSIAR--AGN-----MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLG  222 (253)
T ss_pred             ccccc--cCC-----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCc
Confidence            98754  222     235679999999987765       2689999999999988753211000000001112233457


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      +.+|+|+++.+++.+.. ..|++|++.++.
T Consensus       223 ~~~~~a~~~~~l~~~~~-~~g~~~~~~gg~  251 (253)
T PRK08217        223 EPEEIAHTVRFIIENDY-VTGRVLEIDGGL  251 (253)
T ss_pred             CHHHHHHHHHHHHcCCC-cCCcEEEeCCCc
Confidence            89999999999997654 478899998874

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.9e-19  Score=177.20  Aligned_cols=202  Identities=15%  Similarity=0.115  Sum_probs=142.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+..+...+.+.....             ..++.++.+|+.|.+++.+
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   68 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-------------GLALRVEKLDLTDAIDRAQ   68 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcceEEEeeCCCHHHHHH
Confidence            468999999999999999999999999999999987666554433221             2468899999999999998


Q ss_pred             HhC-CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHH----HHHhcCCCEEEEEcCCCccCCCCccccccch
Q 009648          160 ALG-NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPAAILNLF  228 (530)
Q Consensus       160 a~~-~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~  228 (530)
                      ++. ++|+||||||.....      ..++...+++|+.++.++++    .+++.+.++||++||.+....      ....
T Consensus        69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------~~~~  142 (257)
T PRK09291         69 AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT------GPFT  142 (257)
T ss_pred             HhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC------CCCc
Confidence            886 899999999965321      11234567889888776654    445667789999999754322      1234


Q ss_pred             hHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc-cccce-------eec-ccCcccCCCCCHHHHHHHH
Q 009648          229 WGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-------TLS-QEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~-~~~~~-------~~~-~~~~~~~g~V~v~DVA~ai  292 (530)
                      ..|+.+|.++|.+++       ..|+++++||||++..+..... .....       .+. .......+.++.+|+++.+
T Consensus       143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (257)
T PRK09291        143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAM  222 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHH
Confidence            579999999987654       3699999999999865421110 00000       000 0111223457899999999


Q ss_pred             HHHHhCCC
Q 009648          293 ACMAKNRS  300 (530)
Q Consensus       293 ~~ll~~~~  300 (530)
                      +.++.++.
T Consensus       223 ~~~l~~~~  230 (257)
T PRK09291        223 VEVIPADT  230 (257)
T ss_pred             HHHhcCCC
Confidence            99887654

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.5e-19  Score=183.61  Aligned_cols=201  Identities=15%  Similarity=0.097  Sum_probs=148.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++++.+.++++..             ..++.++.+|+.|.+++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-------------g~~~~~~~~Dv~d~~~v   71 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-------------GAEVLVVPTDVTDADQV   71 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEeeCCCHHHH
Confidence            45689999999999999999999999999999999998887776655433             14688899999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       +++|+||||||.....      ..++...+++|+.++.++++++    ++.+.++||++||.+....  
T Consensus        72 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~--  149 (330)
T PRK06139         72 KALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA--  149 (330)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC--
Confidence            7766       5689999999954322      1223456899999988877775    4455679999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH----H----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|++.+.+.+    +    .|++++.|+||+|.++......  ... ..........++.+|+|+++
T Consensus       150 ----~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--~~~-~~~~~~~~~~~~pe~vA~~i  222 (330)
T PRK06139        150 ----QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA--NYT-GRRLTPPPPVYDPRRVAKAV  222 (330)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc--ccc-cccccCCCCCCCHHHHHHHH
Confidence                1224579999998665543    2    3899999999999988532111  000 01111112357899999999


Q ss_pred             HHHHhCCC
Q 009648          293 ACMAKNRS  300 (530)
Q Consensus       293 ~~ll~~~~  300 (530)
                      ++++.++.
T Consensus       223 l~~~~~~~  230 (330)
T PRK06139        223 VRLADRPR  230 (330)
T ss_pred             HHHHhCCC
Confidence            99998765

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.83  E-value=4.3e-19  Score=180.82  Aligned_cols=218  Identities=12%  Similarity=0.075  Sum_probs=154.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|+||||||+|+||++|+++|+++|++|++++|+... ...+...++..             ..++.++.+|+.|.+
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~  109 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE-------------GVKCLLIPGDVSDEA  109 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-------------CCeEEEEEccCCCHH
Confidence            3457899999999999999999999999999999998643 33333222211             146889999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~  219 (530)
                      .+.++++       ++|+||||||....       +..++...+++|+.++.++++++...  ..++||++||.......
T Consensus       110 ~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~  189 (290)
T PRK06701        110 FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN  189 (290)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC
Confidence            8877663       58999999986421       11223556899999999999998753  33589999998663321


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            .....|+.+|++.+.+++.       .|++++.|+||+++++....... ..+.........+.+.+.+|+|++
T Consensus       190 ------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  263 (290)
T PRK06701        190 ------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPA  263 (290)
T ss_pred             ------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence                  2235699999998877652       58999999999999874321100 000001112223457889999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.+.. ...|.+|++.++.
T Consensus       264 ~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        264 YVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHHcCcccCCccCcEEEeCCCc
Confidence            999998753 2357888887763

>PRK06398 aldose dehydrogenase; Validated

Probab=99.83  E-value=3.5e-19  Score=177.99  Aligned_cols=206  Identities=14%  Similarity=0.104  Sum_probs=149.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+...                        ..++.++.+|+.|.+++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~------------------------~~~~~~~~~D~~~~~~i   59 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------------------YNDVDYFKVDVSNKEQV   59 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc------------------------cCceEEEEccCCCHHHH
Confidence            456899999999999999999999999999999998632                        13578999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        60 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  137 (258)
T PRK06398         60 IKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV--  137 (258)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC--
Confidence            7766       368999999996432      222345668999999988887765    345679999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccc------c-cc----eeecccCcccCCCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE------T-HN----ITLSQEDTLFGGQV  283 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~------~-~~----~~~~~~~~~~~g~V  283 (530)
                          ...+..|+.+|.+.+.+.+.      .+++++.|+||+|.++......      . ..    +.........+...
T Consensus       138 ----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T PRK06398        138 ----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVG  213 (258)
T ss_pred             ----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCc
Confidence                23456799999999988763      3499999999999776321100      0 00    00001111233456


Q ss_pred             CHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ..+|+|+++++++.+.. ...|+++.+.++.
T Consensus       214 ~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        214 KPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             CHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            89999999999997642 3467777777764

>PRK09242 tropinone reductase; Provisional

Probab=99.83  E-value=7e-19  Score=175.01  Aligned_cols=218  Identities=14%  Similarity=0.100  Sum_probs=155.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+...           ....++.++.+|+.|.+++
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~~~~~~   75 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEE-----------FPEREVHGLAADVSDDEDR   75 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-----------CCCCeEEEEECCCCCHHHH
Confidence            45789999999999999999999999999999999987776665544322           1124788999999998876


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ..++       +++|+||||||....      +..++...+.+|+.++.++++++.    +.+.++||++||......  
T Consensus        76 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~--  153 (257)
T PRK09242         76 RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTH--  153 (257)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCC--
Confidence            6555       468999999996321      223345668999999999988875    456679999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccceee-cccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITL-SQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~~-~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|.+.+.+++.       .|++++.|+||++.++...... ...... .......+.....+|++.+
T Consensus       154 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  229 (257)
T PRK09242        154 ----VRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAA  229 (257)
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                22345699999998887662       5899999999999887532110 000000 0011122334578999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +.+++.+.. ...|+++.+.++
T Consensus       230 ~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        230 VAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            999997542 234777777654

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.5e-19  Score=177.84  Aligned_cols=210  Identities=14%  Similarity=0.059  Sum_probs=151.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||+++++.|+++|++|++++|+.++  ..                   ...+++++.+|+.|.+++
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~-------------------~~~~~~~~~~D~~~~~~~   62 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TV-------------------DGRPAEFHAADVRDPDQV   62 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hh-------------------cCCceEEEEccCCCHHHH
Confidence            457899999999999999999999999999999998754  00                   014688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||.....      ..++...+++|+.++.++++++..     .+.++||++||...... 
T Consensus        63 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-  141 (252)
T PRK07856         63 AALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP-  141 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC-
Confidence            77763       569999999964321      122456689999999999998764     23469999999865332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccc-c-cceeecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-T-HNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~-~-~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                           ......|+.+|.+.+.+++.      ..++++.|+||.|.++...... . ............+.....+|+|++
T Consensus       142 -----~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~  216 (252)
T PRK07856        142 -----SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWA  216 (252)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence                 22346799999999988763      2389999999999876422110 0 000000111123345789999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++.+. .+..|.++.+.++..
T Consensus       217 ~~~L~~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        217 CLFLASDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             HHHHcCcccCCccCCEEEECCCcc
Confidence            99999764 345688888887743

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=4.8e-19  Score=176.31  Aligned_cols=214  Identities=13%  Similarity=0.065  Sum_probs=150.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||++++++|+++|++|++++|+..  ..+.+.++..             ..++.++.+|+.|.+++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   70 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-------------GRKFHFITADLIQQKDI   70 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-------------CCeEEEEEeCCCCHHHH
Confidence            45789999999999999999999999999999988643  2222222211             24688999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~  219 (530)
                      .+++       +++|++|||||....      +..++...+++|+.++..+++++..    .+ .++||++||.......
T Consensus        71 ~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~  150 (251)
T PRK12481         71 DSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG  150 (251)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC
Confidence            7776       368999999996432      2234567789999998888777653    33 3699999997653321


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ce-eecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~-~~~~~~~~~~g~V~v~DVA~  290 (530)
                            .....|+.+|++.+.+++       ..|++++.|+||+|.++........ .. .........+.+...+|||+
T Consensus       151 ------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~  224 (251)
T PRK12481        151 ------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAG  224 (251)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  123469999999987765       3699999999999987632211000 00 00001112345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      ++.+++.+. ....|+++.+.++
T Consensus       225 ~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        225 PAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHhCccccCcCCceEEECCC
Confidence            999999753 3345777777655

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.83  E-value=3.5e-19  Score=176.14  Aligned_cols=208  Identities=12%  Similarity=0.063  Sum_probs=151.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||++++++|+++|++|++++|+.  ...                    ...+++++++|+.|.+++
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~--------------------~~~~~~~~~~D~~~~~~~   63 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ--------------------EDYPFATFVLDVSDAAAV   63 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh--------------------cCCceEEEEecCCCHHHH
Confidence            4568999999999999999999999999999999986  110                    124688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       .+|+||||+|....      +..++...+++|+.++.++++++.    +.+.++||++||.+....  
T Consensus        64 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~--  141 (252)
T PRK08220         64 AQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP--  141 (252)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC--
Confidence            87764       48999999996432      122345668899999999988875    345679999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc----cceee------cccCcccCCCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----HNITL------SQEDTLFGGQV  283 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~----~~~~~------~~~~~~~~g~V  283 (530)
                          ......|+.+|+..+.+++       ..|+++++|+||+++++.......    ....+      .........++
T Consensus       142 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (252)
T PRK08220        142 ----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIA  217 (252)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccC
Confidence                2345679999999987765       268999999999999885321100    00000      01112234578


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|+|+++++++.+. ....++++.+.++.
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        218 RPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             CHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            9999999999999754 23456777776653

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.6e-19  Score=174.84  Aligned_cols=209  Identities=15%  Similarity=0.082  Sum_probs=152.7

Q ss_pred             EEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC-
Q 009648           84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-  162 (530)
Q Consensus        84 LVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~-  162 (530)
                      |||||+|+||+++++.|+++|++|++++|+.++...+.+.++              ...+++++.+|+.|.+++.++++ 
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~   66 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG--------------GGAPVRTAALDITDEAAVDAFFAE   66 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------------cCCceEEEEccCCCHHHHHHHHHh
Confidence            699999999999999999999999999999776555433221              02568899999999999988885 


Q ss_pred             --CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHH
Q 009648          163 --NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (530)
Q Consensus       163 --~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~s  234 (530)
                        .+|+||||+|....      +..++...+++|+.++.+++++....+.++||++||.+....      ......|+.+
T Consensus        67 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~------~~~~~~Y~~s  140 (230)
T PRK07041         67 AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP------SASGVLQGAI  140 (230)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC------CCcchHHHHH
Confidence              47999999996432      122345678999999999999766656789999999876332      2335679999


Q ss_pred             HHHHHHHHHH-----CCCCEEEEEcCcccCCCccccccc---cee-ecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 009648          235 KRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETH---NIT-LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (530)
Q Consensus       235 K~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~---~~~-~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~  305 (530)
                      |.+.+.+++.     .+++++.++||++.++........   .+. ........+.....+|||+++++++.+.. ..|+
T Consensus       141 K~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~G~  219 (230)
T PRK07041        141 NAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGF-TTGS  219 (230)
T ss_pred             HHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCC-cCCc
Confidence            9999988764     468999999999876532110000   000 00011112234578999999999998754 5688


Q ss_pred             EEEEeCCC
Q 009648          306 VVEVIAET  313 (530)
Q Consensus       306 vynv~~~~  313 (530)
                      +|++.++.
T Consensus       220 ~~~v~gg~  227 (230)
T PRK07041        220 TVLVDGGH  227 (230)
T ss_pred             EEEeCCCe
Confidence            99988874

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.7e-19  Score=175.85  Aligned_cols=216  Identities=15%  Similarity=0.133  Sum_probs=153.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+...+...             ..++.++.+|+.+.+++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   73 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-------------GGAAHVVSLDVTDYQSI   73 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence            45689999999999999999999999999999999988777665544321             24688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC--------CCEEEEEcC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK--------VNHFIMVSS  212 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g--------v~r~V~iSS  212 (530)
                      .++++       .+|+||||+|....      ...++...+++|+.+..++++++..    ..        .++||++||
T Consensus        74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  153 (258)
T PRK06949         74 KAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIAS  153 (258)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECc
Confidence            77764       58999999995322      1223456688999999988887652    22        359999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccceeecccCcccCCCCC
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVS  284 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~~~~~~~~~~g~V~  284 (530)
                      .+....      ......|+.+|.+.+.+++.       .|+++++||||+|+++...... .............+.+..
T Consensus       154 ~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (258)
T PRK06949        154 VAGLRV------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGK  227 (258)
T ss_pred             ccccCC------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcC
Confidence            765322      22345799999998877653       5899999999999988543111 000000001111234567


Q ss_pred             HHHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      .+|+++++.+++.+.. ...|.++.+.++
T Consensus       228 p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        228 PEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            8999999999987542 335666655554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.82  E-value=3.4e-19  Score=174.26  Aligned_cols=211  Identities=18%  Similarity=0.153  Sum_probs=148.3

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      |||||++|+||+++++.|+++|++|++++|+. .....+.+.+...             ..++.++.+|++|.+++++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~~   67 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY-------------GVKALGVVCDVSDREDVKAVV   67 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-------------CCceEEEEecCCCHHHHHHHH
Confidence            68999999999999999999999999999976 3333433333221             146889999999998887766


Q ss_pred             C-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCCcccc
Q 009648          162 G-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       162 ~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      .       .+|+|||++|.....      ..++...+++|+.++.++++++..    .+.++||++||.+... +.    
T Consensus        68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-g~----  142 (239)
T TIGR01830        68 EEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-GN----  142 (239)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-CC----
Confidence            3       479999999964321      123456688999999999998875    4567999999975432 21    


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                       .....|+.+|...+.+++.       .|++++++|||++.++.....................+.+++|+|++++.++.
T Consensus       143 -~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  221 (239)
T TIGR01830       143 -AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLAS  221 (239)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence             2345799999988766542       68999999999997753221110000000111123456789999999999985


Q ss_pred             CCC-CCCCcEEEEeCC
Q 009648          298 NRS-LSYCKVVEVIAE  312 (530)
Q Consensus       298 ~~~-~~~g~vynv~~~  312 (530)
                      +.. ...+++||+.++
T Consensus       222 ~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       222 DEASYITGQVIHVDGG  237 (239)
T ss_pred             cccCCcCCCEEEeCCC
Confidence            542 246789998665

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.82  E-value=3.1e-19  Score=175.60  Aligned_cols=214  Identities=14%  Similarity=0.126  Sum_probs=145.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ++||||||+|+||+++++.|+++|++|+++ .|+.++...+...+...             ..++.++.+|+.|.+++.+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~i~~   68 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-------------GGKAFVLQADISDENQVVA   68 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-------------CCeEEEEEccCCCHHHHHH
Confidence            579999999999999999999999999875 57666655554443322             1468889999999998887


Q ss_pred             HhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc-------CCCEEEEEcCCCccCC
Q 009648          160 ALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~-------gv~r~V~iSS~~v~~~  218 (530)
                      +++       .+|+||||+|....       ...++...+++|+.++.++++++...       +.++||++||......
T Consensus        69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~  148 (247)
T PRK09730         69 MFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG  148 (247)
T ss_pred             HHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence            764       46999999996421       11123466899999998887776532       2357999999755322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceee-cccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL-SQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~-~~~~~~~~g~V~v~DVA~  290 (530)
                       .+    ..+..|+.+|..++.+++       ..|+++++||||+++++............ ...........+.+|+|+
T Consensus       149 -~~----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  223 (247)
T PRK09730        149 -AP----GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQ  223 (247)
T ss_pred             -CC----CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             11    112359999999987765       25899999999999998532211100000 001111122347999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++++.+.. ...+.+|++.++
T Consensus       224 ~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        224 AIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHhhcChhhcCccCcEEecCCC
Confidence            9999987642 235667776654

>PRK12742 oxidoreductase; Provisional

Probab=99.82  E-value=5.7e-19  Score=173.04  Aligned_cols=211  Identities=16%  Similarity=0.191  Sum_probs=148.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+|+||+++++.|+++|++|+++.|+ .++.+.+.+   +               .+++++.+|++|.++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~---------------~~~~~~~~D~~~~~~   65 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ---E---------------TGATAVQTDSADRDA   65 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---H---------------hCCeEEecCCCCHHH
Confidence            456899999999999999999999999999988764 343333321   1               135678899999888


Q ss_pred             HHHHh---CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccc
Q 009648          157 IEPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       157 l~~a~---~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                      +.+++   +++|+||||||....      +..++...+++|+.++.++++.+...  +.++||++||.......     .
T Consensus        66 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~  140 (237)
T PRK12742         66 VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP-----V  140 (237)
T ss_pred             HHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC-----C
Confidence            77766   458999999986422      12234667999999999998776654  34699999997652211     2


Q ss_pred             cchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          226 NLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      .....|+.+|++.+.+++.       .|+++++|+||.+.++........ ..........+.+.+.+|+++++.+++.+
T Consensus       141 ~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~~p~~~a~~~~~l~s~  219 (237)
T PRK12742        141 AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPM-KDMMHSFMAIKRHGRPEEVAGMVAWLAGP  219 (237)
T ss_pred             CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHH-HHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence            3456799999999987752       689999999999987643211000 00000111223467899999999999976


Q ss_pred             CC-CCCCcEEEEeCC
Q 009648          299 RS-LSYCKVVEVIAE  312 (530)
Q Consensus       299 ~~-~~~g~vynv~~~  312 (530)
                      .. ...|.++.+.++
T Consensus       220 ~~~~~~G~~~~~dgg  234 (237)
T PRK12742        220 EASFVTGAMHTIDGA  234 (237)
T ss_pred             ccCcccCCEEEeCCC
Confidence            53 235777777654

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=8.1e-19  Score=177.14  Aligned_cols=216  Identities=12%  Similarity=0.128  Sum_probs=148.9

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|++|||||++  +||++++++|+++|++|++++|+....+.+.+...+.              +...++.+|+.|.+
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--------------g~~~~~~~Dv~d~~   70 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--------------GSDFVLPCDVEDIA   70 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--------------CCceEEeCCCCCHH
Confidence            4578999999997  9999999999999999999999754333322211111              12357889999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++++++       +.+|++|||||....          +..++...+++|+.++.++++++...  +.++||++||.+..
T Consensus        71 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~  150 (271)
T PRK06505         71 SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST  150 (271)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc
Confidence            877665       468999999996421          12335567889999999888876532  22689999997652


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+.       .|++++.|.||+|.++........ .. .........+.+...+|
T Consensus       151 ~~------~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  224 (271)
T PRK06505        151 RV------MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDE  224 (271)
T ss_pred             cc------CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHH
Confidence            21      12345799999998877652       689999999999987642110000 00 00011112334578999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ||+++++++.+.. +..|+++.+.++.
T Consensus       225 va~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        225 VGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHHHHhCccccccCceEEeecCCc
Confidence            9999999997643 3457788777764

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.82  E-value=4.3e-19  Score=176.81  Aligned_cols=197  Identities=17%  Similarity=0.038  Sum_probs=142.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.               ..+++++.+|+.|.+++.+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~v~~   65 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------------AGNAWTGALDVTDRAAWDA   65 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence            3689999999999999999999999999999999877666543211               2478999999999888777


Q ss_pred             HhC--------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          160 ALG--------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~~--------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++        .+|+||||||.....      ..++...+++|+.++.++++++.    ..+.++||++||......   
T Consensus        66 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---  142 (260)
T PRK08267         66 ALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG---  142 (260)
T ss_pred             HHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC---
Confidence            653        569999999964321      12345678999999999988875    345679999999754322   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|...+.+++.       .|+++++|+||++.+.....  .............+..+..+|+|++++.
T Consensus       143 ---~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~  217 (260)
T PRK08267        143 ---QPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG--TSNEVDAGSTKRLGVRLTPEDVAEAVWA  217 (260)
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc--ccchhhhhhHhhccCCCCHHHHHHHHHH
Confidence               12245799999998876652       58999999999997653221  0000000000112234788999999999


Q ss_pred             HHhCC
Q 009648          295 MAKNR  299 (530)
Q Consensus       295 ll~~~  299 (530)
                      ++++.
T Consensus       218 ~~~~~  222 (260)
T PRK08267        218 AVQHP  222 (260)
T ss_pred             HHhCC
Confidence            99764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.82  E-value=9.1e-19  Score=171.73  Aligned_cols=214  Identities=17%  Similarity=0.149  Sum_probs=147.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |++|||||+|+||+++++.|+++|++|+++.| +..+...+.+.+...             ..++.++.+|+.|.+++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   67 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-------------GFDFRVVEGDVSSFESCKA   67 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-------------CCceEEEEecCCCHHHHHH
Confidence            57999999999999999999999999999998 544444433322211             2478999999999888766


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHH----HHHHhcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll----~aa~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       +.+|+||||+|....      +..++...+++|+.++..++    ..+++.+.++||++||......    
T Consensus        68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~----  143 (242)
T TIGR01829        68 AVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG----  143 (242)
T ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC----
Confidence            55       458999999985422      12234456788999877754    4455667789999999754321    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|..+|...+.+++.       .|+++++++||++.++.....................+...+|+++++.++
T Consensus       144 --~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l  221 (242)
T TIGR01829       144 --QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFL  221 (242)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              12345699999987766542       589999999999988753211100000011112233456789999999988


Q ss_pred             HhCCC-CCCCcEEEEeCCC
Q 009648          296 AKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       296 l~~~~-~~~g~vynv~~~~  313 (530)
                      +.++. ...|+++.+.++.
T Consensus       222 ~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       222 ASEEAGYITGATLSINGGL  240 (242)
T ss_pred             cCchhcCccCCEEEecCCc
Confidence            87642 3468888888774

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.5e-18  Score=171.36  Aligned_cols=194  Identities=16%  Similarity=0.190  Sum_probs=144.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+.+.           ....+++++.+|++|.+++.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~   70 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLAR-----------YPGIKVAVAALDVNDHDQVFE   70 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEEcCCCCHHHHHH
Confidence            568999999999999999999999999999999988777665544321           112478999999999988766


Q ss_pred             Hh-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       +++|+||||||......      ..+...+++|+.+..++++++.    +.+.++||++||.+... +.+ 
T Consensus        71 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-~~~-  148 (248)
T PRK08251         71 VFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR-GLP-  148 (248)
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc-CCC-
Confidence            55       46899999999643221      1223457899999988888764    45778999999975532 111 


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                         .....|+.+|.+.+.+++.       .++++++|+||+|.++......         .  ....++.+|+|++|+.+
T Consensus       149 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~--~~~~~~~~~~a~~i~~~  214 (248)
T PRK08251        149 ---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK---------S--TPFMVDTETGVKALVKA  214 (248)
T ss_pred             ---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc---------c--CCccCCHHHHHHHHHHH
Confidence               1245799999998877642       5899999999999876432111         0  11247899999999999


Q ss_pred             HhCCC
Q 009648          296 AKNRS  300 (530)
Q Consensus       296 l~~~~  300 (530)
                      ++.+.
T Consensus       215 ~~~~~  219 (248)
T PRK08251        215 IEKEP  219 (248)
T ss_pred             HhcCC
Confidence            98754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.82  E-value=8.2e-19  Score=175.94  Aligned_cols=218  Identities=15%  Similarity=0.093  Sum_probs=153.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+...             ..++.++.+|++|.++
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   72 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA-------------GPEGLGVSADVRDYAA   72 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-------------CCceEEEECCCCCHHH
Confidence            355789999999999999999999999999999999987766554444322             1467889999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++...   ..++||++||......  
T Consensus        73 i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~--  150 (264)
T PRK07576         73 VEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP--  150 (264)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC--
Confidence            877663       57999999984321      11223456789999999999887642   2269999999754221  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCC-cccc-ccccee-ecccCcccCCCCCHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DAYK-ETHNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~-~~~~-~~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                          ......|+.+|.+.+.+++.       .|+++++|+||++.+.. .... ...... ........+..+..+|+|+
T Consensus       151 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  226 (264)
T PRK07576        151 ----MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIAN  226 (264)
T ss_pred             ----CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                23346799999999988763       68999999999987532 1100 000000 0001112344678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++++.+.. ...|..+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        227 AALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHHcChhhcCccCCEEEECCCc
Confidence            9999997642 2356777777764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=6.8e-19  Score=175.05  Aligned_cols=213  Identities=13%  Similarity=0.142  Sum_probs=147.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+++||||+|+||+++++.|+++|++|+++.|+.+....   .+..               .++.++.+|+.|.+++
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~---------------~~~~~~~~Dl~~~~~~   66 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK---ELRE---------------KGVFTIKCDVGNRDQV   66 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHh---------------CCCeEEEecCCCHHHH
Confidence            456899999999999999999999999999998776532211   1110               2478899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHH----HHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~L----l~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++..+    ++.+++.+.++||++||....... 
T Consensus        67 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-  145 (255)
T PRK06463         67 KKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA-  145 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-
Confidence            77763       68999999986422      2223456688999996555    444555566799999997653211 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc----ee-ecccCcccCCCCCHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN----IT-LSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~----~~-~~~~~~~~~g~V~v~DV  288 (530)
                          ......|+.+|++.+.+++.       .|+++++|+||+|..+.........    .. ........+.+.+.+|+
T Consensus       146 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  221 (255)
T PRK06463        146 ----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDI  221 (255)
T ss_pred             ----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHH
Confidence                12345699999999877653       5899999999999765321100000    00 00111223445789999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |+++++++.+.. ...|.++.+.++.
T Consensus       222 a~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        222 ANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHHHcChhhcCCCCCEEEECCCe
Confidence            999999997643 3457888887765

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.7e-18  Score=172.68  Aligned_cols=195  Identities=13%  Similarity=0.147  Sum_probs=139.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++...+..                   .+++++.+|+.|.+++.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~Dl~~~~~~~~~   62 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------------------AGFTAVQLDVNDGAALARL   62 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeEEEeeCCCHHHHHHH
Confidence            689999999999999999999999999999999876554321                   3467889999998887766


Q ss_pred             h-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCcccc
Q 009648          161 L-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +       +++|+||||||.....      ..++...+++|+.++.++++++..   .+.++||++||......      
T Consensus        63 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------  136 (274)
T PRK05693         63 AEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV------  136 (274)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC------
Confidence            6       4689999999964321      123455688999999998888743   24468999999754221      


Q ss_pred             ccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc-eeecccC--------------cccCCC
Q 009648          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQED--------------TLFGGQ  282 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~--------------~~~~g~  282 (530)
                      ......|+.+|.+.+.+.+       ..|+++++||||.|.++......... ..+....              ......
T Consensus       137 ~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (274)
T PRK05693        137 TPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNP  216 (274)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCC
Confidence            1224569999999887654       26999999999999876422111000 0000000              001123


Q ss_pred             CCHHHHHHHHHHHHhCCC
Q 009648          283 VSNLQVAELLACMAKNRS  300 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~  300 (530)
                      ...+|+|+.++.+++.+.
T Consensus       217 ~~~~~~a~~i~~~~~~~~  234 (274)
T PRK05693        217 TPAAEFARQLLAAVQQSP  234 (274)
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            689999999999998664

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.82  E-value=9.9e-19  Score=174.70  Aligned_cols=214  Identities=15%  Similarity=0.068  Sum_probs=151.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++++|+.|.+++
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   67 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----------------GDHVLVVEGDVTSYADN   67 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCcceEEEccCCCHHHH
Confidence            45789999999999999999999999999999999987766554321                14678899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC--c-----cCC----CCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEK--E-----VFD----ITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~--~-----~~~----~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~  216 (530)
                      ..++       +.+|+||||||....  .     ..+    +...+++|+.++..+++++...   ..++||++||....
T Consensus        68 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~  147 (263)
T PRK06200         68 QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF  147 (263)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence            7665       368999999996421  1     111    3456789999988888887632   23589999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccc---c------cc-e-eecccCccc
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE---T------HN-I-TLSQEDTLF  279 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~---~------~~-~-~~~~~~~~~  279 (530)
                      ...      .....|+.+|++.+.+++.      .+++++.|.||+|..+......   .      .. . .........
T Consensus       148 ~~~------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  221 (263)
T PRK06200        148 YPG------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL  221 (263)
T ss_pred             CCC------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC
Confidence            321      2234699999999888763      3599999999999876321100   0      00 0 000111223


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~--~~~~g~vynv~~~~  313 (530)
                      +.....+|+|+++++++.+.  ....|+++.+.++.
T Consensus       222 ~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~  257 (263)
T PRK06200        222 QFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGL  257 (263)
T ss_pred             CCCCCHHHHhhhhhheecccccCcccceEEEEcCce
Confidence            44578999999999999755  23467888777663

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1e-18  Score=172.42  Aligned_cols=193  Identities=17%  Similarity=0.134  Sum_probs=143.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...            ...+++++++|+.|.+++.+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~~~~   68 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR------------GAVAVSTHELDILDTASHAA   68 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh------------cCCeEEEEecCCCChHHHHH
Confidence            368999999999999999999999999999999988776655443321            12578999999999988877


Q ss_pred             HhC----CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCCccccc
Q 009648          160 ALG----NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       160 a~~----~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                      +++    .+|+||||+|....      +..++...+++|+.++.++++++..    .+.++||++||...... .     
T Consensus        69 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~-----  142 (243)
T PRK07102         69 FLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG-R-----  142 (243)
T ss_pred             HHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC-C-----
Confidence            664    46999999985422      1112235688999999998887653    46789999999754221 1     


Q ss_pred             cchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      .....|+.+|+..+.+++       ..|+++++|+||+++++.....     .     ......++.+|+|+.++.++.+
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-----~-----~~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-----K-----LPGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-----C-----CCccccCCHHHHHHHHHHHHhC
Confidence            123469999998876664       3689999999999998632110     0     0112347899999999999987


Q ss_pred             CC
Q 009648          299 RS  300 (530)
Q Consensus       299 ~~  300 (530)
                      +.
T Consensus       213 ~~  214 (243)
T PRK07102        213 GK  214 (243)
T ss_pred             CC
Confidence            64

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.2e-18  Score=172.22  Aligned_cols=218  Identities=15%  Similarity=0.113  Sum_probs=152.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.+.           ....++.++.+|+.|.+++
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~v   74 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREK-----------FPGARLLAARCDVLDEADV   74 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988777665544321           0114688899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .+++       +.+|+||||||....      +..++...+++|+.+...+++++    ++.+.++||++||......  
T Consensus        75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  152 (265)
T PRK07062         75 AAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP--  152 (265)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC--
Confidence            6655       468999999996422      12234566788888776666554    4455679999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc----ccceee--------cccCcccCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE----THNITL--------SQEDTLFGG  281 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~----~~~~~~--------~~~~~~~~g  281 (530)
                          ......|+.+|.+.+.+.+       ..|++++.|+||+|.++......    ......        .......+.
T Consensus       153 ----~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  228 (265)
T PRK07062        153 ----EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGR  228 (265)
T ss_pred             ----CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCC
Confidence                1224569999998876654       36899999999999876421100    000000        001112234


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      +...+|||+++++++.+. ....|+++.+.++
T Consensus       229 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            578999999999998753 3346788877765

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.81  E-value=4.2e-19  Score=183.18  Aligned_cols=170  Identities=14%  Similarity=0.176  Sum_probs=126.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+..             ...++.++.+|+.|.+++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v   70 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-------------PPDSYTIIHIDLGDLDSV   70 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-------------cCCceEEEEecCCCHHHH
Confidence            4578999999999999999999999999999999998877665543321             124689999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cC--CCEEEEEcCCCccC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g--v~r~V~iSS~~v~~  217 (530)
                      .++++       .+|+||||||....       +..++...+++|+.++.+|++++..    .+  .+|||++||.....
T Consensus        71 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~  150 (322)
T PRK07453         71 RRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP  150 (322)
T ss_pred             HHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence            87764       48999999995421       2223456789999999998887764    22  35999999975421


Q ss_pred             ---CCC---c-----------------------cccccchhHHHHHHHHHHHHHH----H----CCCCEEEEEcCcccCC
Q 009648          218 ---FGF---P-----------------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERP  260 (530)
Q Consensus       218 ---~~~---~-----------------------~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tIvRPg~V~Gp  260 (530)
                         .+.   +                       .....+...|+.+|.+.+.+++    .    .|++++.||||+|++.
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t  230 (322)
T PRK07453        151 KELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT  230 (322)
T ss_pred             cccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence               010   0                       0113456789999987654433    2    4799999999999753

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.2e-18  Score=178.04  Aligned_cols=203  Identities=14%  Similarity=0.055  Sum_probs=147.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++++.+.+++.              ....+..+.+|++|.+++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~--------------~~~~~~~~~~Dv~d~~~v   72 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELG--------------GDDRVLTVVADVTDLAAM   72 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------CCCcEEEEEecCCCHHHH
Confidence            457899999999999999999999999999999999887766554321              114567778999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCc
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~  221 (530)
                      .+++       +.+|+||||||....      +..++...+++|+.++.++++++...   +.++||++||.+....   
T Consensus        73 ~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---  149 (296)
T PRK05872         73 QAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA---  149 (296)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC---
Confidence            7665       468999999996432      22234567899999999999887632   3469999999765332   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ce---eecccCcccCCCCCHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI---TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~---~~~~~~~~~~g~V~v~DVA~  290 (530)
                         ......|+.+|...+.+++       ..|+++++++||++.++........ ..   ............++.+|+|+
T Consensus       150 ---~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  226 (296)
T PRK05872        150 ---APGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA  226 (296)
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHH
Confidence               1234679999999988765       2689999999999987642211100 00   00000112234678999999


Q ss_pred             HHHHHHhCCC
Q 009648          291 LLACMAKNRS  300 (530)
Q Consensus       291 ai~~ll~~~~  300 (530)
                      +++.++.+..
T Consensus       227 ~i~~~~~~~~  236 (296)
T PRK05872        227 AFVDGIERRA  236 (296)
T ss_pred             HHHHHHhcCC
Confidence            9999998764

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.81  E-value=7.8e-19  Score=175.45  Aligned_cols=217  Identities=12%  Similarity=0.073  Sum_probs=147.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||++++++|+++|++|+++.| +.++.+.+.+.++..            ...++.++.+|++|.++
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~   73 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK------------YGIKAKAYPLNILEPET   73 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh------------cCCceEEEEcCCCCHHH
Confidence            45789999999999999999999999999998875 445555444433221            12478899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~  213 (530)
                      +++++       +.+|+||||||....            +..++...+++|+.+...+.++    +++.+.++||++||.
T Consensus        74 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~  153 (260)
T PRK08416         74 YKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSST  153 (260)
T ss_pred             HHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecc
Confidence            77666       358999999985311            1122344577787776655444    444455799999997


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-cee-ecccCcccCCCCC
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVS  284 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~-~~~~~~~~~g~V~  284 (530)
                      +....      ...+..|+.+|++.+.+++.       .|++++.|+||++.++........ ... ........+.+..
T Consensus       154 ~~~~~------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~  227 (260)
T PRK08416        154 GNLVY------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQ  227 (260)
T ss_pred             ccccC------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCC
Confidence            65322      12345799999999987752       589999999999977632111000 000 0001112334678


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      .+|+|+++++++.+. .+..|+++.+.++
T Consensus       228 p~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        228 PEDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            999999999999754 3345777777665

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=8.2e-19  Score=173.26  Aligned_cols=215  Identities=16%  Similarity=0.168  Sum_probs=145.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||+|+||.++++.|+++|++|++++ |+.++.+.+...+...             ..++.++.+|+.|.+++.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~   68 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-------------GGRACVVAGDVANEADVI   68 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEeccCCHHHHH
Confidence            46899999999999999999999999998765 5555555544433321             247899999999998877


Q ss_pred             HHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc----C---CCEEEEEcCCCccC
Q 009648          159 PAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNK  217 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g---v~r~V~iSS~~v~~  217 (530)
                      +++       ..+|+||||||....       ...++...+++|+.++.++++++.+.    +   .++||++||.+...
T Consensus        69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~  148 (248)
T PRK06947         69 AMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL  148 (248)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence            655       368999999996421       11123455889999998887654432    1   24799999975532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~DVA  289 (530)
                      . ..    ..+..|+.+|...+.+++.       .|+++++||||++.++.......... .........+....++|+|
T Consensus       149 ~-~~----~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va  223 (248)
T PRK06947        149 G-SP----NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVA  223 (248)
T ss_pred             C-CC----CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHH
Confidence            2 11    1134699999998876542       58999999999999874321100000 0000111122346899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +.+++++.+.. ...|+++.+.++
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        224 ETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHcCccccCcCCceEeeCCC
Confidence            99999988764 245666666543

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=172.60  Aligned_cols=215  Identities=13%  Similarity=0.095  Sum_probs=152.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|++|||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+.+.             ..++.++.+|+.|.+++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~   67 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-------------PGQVLTVQMDVRNPEDVQK   67 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHHH
Confidence            368999999999999999999999999999999987766665544322             2578899999999988877


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCCCc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~~~  221 (530)
                      ++       +++|+||||+|....      +..++...+++|+.++.++++++.+    .+ .++||++||......   
T Consensus        68 ~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---  144 (252)
T PRK07677         68 MVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA---  144 (252)
T ss_pred             HHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC---
Confidence            66       468999999985321      1222456799999999999998853    22 368999999754221   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH--------CCCCEEEEEcCcccCCCccc--ccccce-eecccCcccCCCCCHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAY--KETHNI-TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~--------~gl~~tIvRPg~V~Gp~~~~--~~~~~~-~~~~~~~~~~g~V~v~DVA~  290 (530)
                         ......|+.+|.+.+.+.+.        .|++++.|+||++.+.....  ...... .........+.+...+|+|+
T Consensus       145 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  221 (252)
T PRK07677        145 ---GPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAG  221 (252)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence               12234699999998877652        48999999999998542110  000000 00001122345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.+++.... ...|.++.+.++.
T Consensus       222 ~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        222 LAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHcCccccccCCCEEEECCCe
Confidence            9999887642 3457777777664

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.81  E-value=1.2e-18  Score=173.94  Aligned_cols=213  Identities=15%  Similarity=0.123  Sum_probs=148.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++...+.+++.+.              .++.++.+|+.|.++++++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~Dv~d~~~~~~~   66 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--------------GEVYAVKADLSDKDDLKNL   66 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--------------CCceEEEcCCCCHHHHHHH
Confidence            57999999999999999999999999999999988776665544321              4678899999999888776


Q ss_pred             h-------CCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHH----HHH-hcCCCEEEEEcCCCccCCCC
Q 009648          161 L-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVD----AAT-IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~----aa~-~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +       +++|+||||||....        ...++...+.+|+.+...+.+    .+. +.+.++||++||..+...  
T Consensus        67 ~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~--  144 (259)
T PRK08340         67 VKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP--  144 (259)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC--
Confidence            6       468999999996321        111223345677766554443    333 334579999999866321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc---------ccce---eecccCcccCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---------THNI---TLSQEDTLFGG  281 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~---------~~~~---~~~~~~~~~~g  281 (530)
                          ......|+.+|+..+.+.+.       .|++++.|.||++.++......         ....   .........+.
T Consensus       145 ----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  220 (259)
T PRK08340        145 ----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKR  220 (259)
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccC
Confidence                22345799999999887763       6899999999999877432100         0000   00001112344


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +...+|||+++++++.+.. +..|.++.+.++.
T Consensus       221 ~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        221 TGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            6789999999999998653 3467777777664

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=171.55  Aligned_cols=187  Identities=14%  Similarity=0.140  Sum_probs=142.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|+||||+|+||+++++.|+++|++|++++|+.++.+++.+.                 ..++.++.+|++|.+++.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~D~~~~~~~~~~   64 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-----------------SANIFTLAFDVTDHPGTKAA   64 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-----------------cCCCeEEEeeCCCHHHHHHH
Confidence            6799999999999999999999999999999998766554321                 14688999999999999888


Q ss_pred             hCC----CcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccccch
Q 009648          161 LGN----ASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF  228 (530)
Q Consensus       161 ~~~----vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~  228 (530)
                      ++.    .|++|||||....      +..++...+++|+.++.++++++...  +.++||++||......      ....
T Consensus        65 ~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------~~~~  138 (240)
T PRK06101         65 LSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------LPRA  138 (240)
T ss_pred             HHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------CCCC
Confidence            864    5899999985321      11123456999999999999998863  3458999999754221      1234


Q ss_pred             hHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          229 WGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ..|+.+|+.++.+.+       ..|+++++||||+++++......   .       .....++.+|+|+.++..++.+.
T Consensus       139 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~---~-------~~~~~~~~~~~a~~i~~~i~~~~  207 (240)
T PRK06101        139 EAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT---F-------AMPMIITVEQASQEIRAQLARGK  207 (240)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC---C-------CCCcccCHHHHHHHHHHHHhcCC
Confidence            579999999998764       36999999999999987432110   0       01123789999999999998764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.81  E-value=1.7e-18  Score=169.91  Aligned_cols=184  Identities=16%  Similarity=0.117  Sum_probs=141.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+||||+|+||+++++.|+++|+ +|++++|+.++...                    ...++.++.+|+.|.++
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------------------~~~~~~~~~~D~~~~~~   63 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------------------LGPRVVPLQLDVTDPAS   63 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------------------cCCceEEEEecCCCHHH
Confidence            4568999999999999999999999998 99999998765432                    01578999999999999


Q ss_pred             HHHHhC---CCcEEEEcccC-CCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          157 IEPALG---NASVVICCIGA-SEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l~~a~~---~vD~VI~~Ag~-~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +.++++   .+|+|||++|. ...      ...++...+++|+.++.++++++.    +.+.++||++||......    
T Consensus        64 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~----  139 (238)
T PRK08264         64 VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN----  139 (238)
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC----
Confidence            888775   58999999997 221      112234568899999999998865    456779999999765321    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|+.+|..++.+++.       .|++++++|||.+.++....             ..+..++.+|++++++..
T Consensus       140 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~~~~~~~~~~~a~~~~~~  204 (238)
T PRK08264        140 --FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------LDAPKASPADVARQILDA  204 (238)
T ss_pred             --CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------CCcCCCCHHHHHHHHHHH
Confidence              23456799999999877652       58999999999998763210             011258899999999999


Q ss_pred             HhCCC
Q 009648          296 AKNRS  300 (530)
Q Consensus       296 l~~~~  300 (530)
                      +..+.
T Consensus       205 ~~~~~  209 (238)
T PRK08264        205 LEAGD  209 (238)
T ss_pred             HhCCC
Confidence            88654

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.4e-18  Score=172.73  Aligned_cols=218  Identities=14%  Similarity=0.155  Sum_probs=155.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+++++|+||||+|+||+++++.|+++|++ |++++|+.++...+.+.+...             ..++.++.+|+.|.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   69 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-------------GAKAVFVQADLSDVE   69 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEEccCCCHH
Confidence            356789999999999999999999999998 999999877665544433221             246888999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~  217 (530)
                      ++.+++       .++|+||||+|....      +..++...+++|+.++.++++++.+    .+ .++||++||.....
T Consensus        70 ~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~  149 (260)
T PRK06198         70 DCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHG  149 (260)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccccc
Confidence            887766       368999999996432      1222345688999999999888753    22 35899999986532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc------cceee-cccCcccCCCC
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET------HNITL-SQEDTLFGGQV  283 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~------~~~~~-~~~~~~~~g~V  283 (530)
                      .      ......|+.+|...|.+++.       .+++++.++||+++++.......      ..+.. .......+.++
T Consensus       150 ~------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T PRK06198        150 G------QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLL  223 (260)
T ss_pred             C------CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCc
Confidence            1      12245799999999988762       57999999999999875421100      00000 00112234568


Q ss_pred             CHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.+|+|+++++++.+.. ...|++|++.++.
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        224 DPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             CHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence            99999999999987553 2358888887764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1.9e-18  Score=172.76  Aligned_cols=216  Identities=12%  Similarity=0.114  Sum_probs=149.0

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..++|++|||||+  ++||+++++.|+++|++|++++|+....+.+.+...+.              ..+.++.+|+.|.
T Consensus         7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~   72 (258)
T PRK07533          7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--------------DAPIFLPLDVREP   72 (258)
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--------------ccceEEecCcCCH
Confidence            3567899999998  59999999999999999999999864332222211111              2356789999999


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          155 VQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      +++.+++       +.+|++|||||....          +..++...+++|+.+..++++++...  ..++||++||.+.
T Consensus        73 ~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~  152 (258)
T PRK07533         73 GQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA  152 (258)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence            8887665       468999999996421          22235667899999999988877542  2358999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~  286 (530)
                      ...      ...+..|+.+|++.+.+.+       ..|++++.|.||+|.++....... ... .........+.....+
T Consensus       153 ~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  226 (258)
T PRK07533        153 EKV------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDID  226 (258)
T ss_pred             ccC------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHH
Confidence            321      2234579999999887765       268999999999998763211000 000 0000112233467899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      |+|+++++++.+. ....|+++.+.++
T Consensus       227 dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        227 DVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHHHhChhhccccCcEEeeCCc
Confidence            9999999999764 3346777776655

>PRK08017 oxidoreductase; Provisional

Probab=99.81  E-value=1.7e-18  Score=171.70  Aligned_cols=195  Identities=15%  Similarity=0.104  Sum_probs=139.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+                   .+++++.+|+.|.+++.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~~~~   63 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------------------LGFTGILLDLDDPESVERA   63 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------------------CCCeEEEeecCCHHHHHHH
Confidence            589999999999999999999999999999999876554321                   2467889999998876655


Q ss_pred             h--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHH----HHHHHhcCCCEEEEEcCCCccCCCCcc
Q 009648          161 L--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~L----l~aa~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +        ..+|+|||++|....      +..++...+++|+.++.++    ++++++.+.++||++||......    
T Consensus        64 ~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----  139 (256)
T PRK08017         64 ADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS----  139 (256)
T ss_pred             HHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC----
Confidence            4        347999999985432      1122345688999888775    66666777889999999754322    


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-c-ceeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-H-NITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~-~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|...|.+.+       ..++++++||||.+.+........ . .............+++++|++++++
T Consensus       140 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  217 (256)
T PRK08017        140 --TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLR  217 (256)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHH
Confidence              2234579999999987653       368999999999987653211100 0 0000000111124689999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      .+++++.
T Consensus       218 ~~~~~~~  224 (256)
T PRK08017        218 HALESPK  224 (256)
T ss_pred             HHHhCCC
Confidence            9998876

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=1.3e-18  Score=173.37  Aligned_cols=213  Identities=15%  Similarity=0.127  Sum_probs=149.1

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|+|+||||+  ++||++++++|+++|++|++++|+. +....   +.+.            ...++.++++|+.|.+
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~---~~~~------------~~~~~~~~~~Dl~~~~   68 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKS---LQKL------------VDEEDLLVECDVASDE   68 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHH---HHhh------------ccCceeEEeCCCCCHH
Confidence            457899999999  7999999999999999999999983 32222   2211            0135788999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++++++       +.+|++|||||....          +..++...+++|+.+...+++++...  +.++||++||.+..
T Consensus        69 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~  148 (252)
T PRK06079         69 SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE  148 (252)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc
Confidence            877655       468999999996421          12234566889999988888887643  23689999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+.       .|++++.|.||.|.++........ .. .........+.+...+|
T Consensus       149 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (252)
T PRK06079        149 RA------IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEE  222 (252)
T ss_pred             cc------CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHH
Confidence            21      12346799999999887752       689999999999987632111000 00 00011122345678999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      ||+++.+++.+. ....|+++.+.++
T Consensus       223 va~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        223 VGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHhCcccccccccEEEeCCc
Confidence            999999999764 3345777776665

>PRK07069 short chain dehydrogenase; Validated

Probab=99.81  E-value=2.3e-18  Score=170.06  Aligned_cols=214  Identities=13%  Similarity=0.083  Sum_probs=148.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      +|+||||+|+||+++++.|+++|++|++++|+ .++..++.+.+...           .....+.++.+|+.|.+++.++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~~   69 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAA-----------HGEGVAFAAVQDVTDEAQWQAL   69 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-----------CCCceEEEEEeecCCHHHHHHH
Confidence            38999999999999999999999999999998 66565555443321           0012355688999999887666


Q ss_pred             h-------CCCcEEEEcccCCCCc------cCCCCcchHhHHH----HHHHHHHHHHhcCCCEEEEEcCCCccCCCCccc
Q 009648          161 L-------GNASVVICCIGASEKE------VFDITGPYRIDFQ----ATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~----gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      +       +++|+||||||.....      ..++...+++|+.    +++++++++++.+.++||++||......     
T Consensus        70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~-----  144 (251)
T PRK07069         70 LAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA-----  144 (251)
T ss_pred             HHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC-----
Confidence            5       4689999999864321      1123455778887    7778888888888889999999866332     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------C--CCCEEEEEcCcccCCCcccccc----c-ceeecccCcccCCCCCHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAYKET----H-NITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~--gl~~tIvRPg~V~Gp~~~~~~~----~-~~~~~~~~~~~~g~V~v~DVA  289 (530)
                       ......|+.+|...+.+++.       .  ++++++|+||++.++.......    . ...........+.+.+++|+|
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  223 (251)
T PRK07069        145 -EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVA  223 (251)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHH
Confidence             12345699999998877652       2  4889999999999875321100    0 000001112223456899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++++++.+.. ...|+.+.+.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        224 HAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHcCccccCccCCEEEECCC
Confidence            99999886542 235666666554

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.8e-18  Score=169.10  Aligned_cols=202  Identities=18%  Similarity=0.168  Sum_probs=144.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+++|++|++++|+..+  .                      ...+++.+|+.|.+++++
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--~----------------------~~~~~~~~D~~~~~~~~~   58 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--D----------------------FPGELFACDLADIEQTAA   58 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--c----------------------cCceEEEeeCCCHHHHHH
Confidence            5789999999999999999999999999999998753  0                      112578899999988877


Q ss_pred             HhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCccc
Q 009648          160 ALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       160 a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      +++      ++|+||||+|....      +..++...+++|+.+..++++++    ++.+.++||++||.+.  ++.   
T Consensus        59 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~---  133 (234)
T PRK07577         59 TLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI--FGA---  133 (234)
T ss_pred             HHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc--cCC---
Confidence            774      68999999996432      22234456889999987776665    4567789999999864  221   


Q ss_pred             cccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc--cee-ecccCcccCCCCCHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NIT-LSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~--~~~-~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        .....|+.+|...+.+++       ..|+++++||||++.++........  ... ........+.....+|+|++++
T Consensus       134 --~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  211 (234)
T PRK07577        134 --LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIA  211 (234)
T ss_pred             --CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence              224679999999887765       2599999999999987643211000  000 0000111223457899999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++.++. ...|.++.+.++
T Consensus       212 ~l~~~~~~~~~g~~~~~~g~  231 (234)
T PRK07577        212 FLLSDDAGFITGQVLGVDGG  231 (234)
T ss_pred             HHhCcccCCccceEEEecCC
Confidence            9997653 235778877665

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.2e-18  Score=174.39  Aligned_cols=221  Identities=16%  Similarity=0.058  Sum_probs=146.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+++||||||+|+||+++++.|+++|++|++++|+.++.....+.+...           ....+++++.+|+.|.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~d~~   80 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAA-----------TPGADVTLQELDLTSLA   80 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------CCCCceEEEECCCCCHH
Confidence            3456789999999999999999999999999999999987766554444321           11246889999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----ccCCCCcchHhHHHH----HHHHHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~g----t~~Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++.+++       .++|+||||||....    ...++...+++|+.+    +..+++.+++.+.++||++||.+...++.
T Consensus        81 ~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~  160 (306)
T PRK06197         81 SVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA  160 (306)
T ss_pred             HHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC
Confidence            887765       358999999995422    223456678999999    55666667666667999999976432221


Q ss_pred             c-------cccccchhHHHHHHHHHHHHHHH-------CCCCEEEE--EcCcccCCCccccccccee-ecccCcccCCCC
Q 009648          221 P-------AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIV--RPGGMERPTDAYKETHNIT-LSQEDTLFGGQV  283 (530)
Q Consensus       221 ~-------~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIv--RPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V  283 (530)
                      .       .....+...|+.+|++.+.+.+.       .|++++++  .||+|.++........... .......+  ..
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~  238 (306)
T PRK06197        161 IHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLL--AQ  238 (306)
T ss_pred             CCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhh--cC
Confidence            0       01134567899999998877652       56766655  6999987643211100000 00000001  13


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      ..++-+..+++++..+....|+.|+.
T Consensus       239 ~~~~g~~~~~~~~~~~~~~~g~~~~~  264 (306)
T PRK06197        239 SPEMGALPTLRAATDPAVRGGQYYGP  264 (306)
T ss_pred             CHHHHHHHHHHHhcCCCcCCCeEEcc
Confidence            45666667777776654334554443

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=2.4e-18  Score=168.76  Aligned_cols=211  Identities=11%  Similarity=0.080  Sum_probs=148.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||.++++.|+++|++|++++|+.++.+.+.+.+..              ..+++++.+|+.|.+++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~   68 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK--------------YGNIHYVVGDVSSTESA   68 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------cCCeEEEECCCCCHHHH
Confidence            3467999999999999999999999999999999998776655443321              14689999999998887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc----cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPAL-------GNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~----~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      .+++       .++|+|||++|.....    ..++...+++|+.+...+++.+...  ..++||++||.......     
T Consensus        69 ~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----  143 (238)
T PRK05786         69 RNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----  143 (238)
T ss_pred             HHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----
Confidence            6655       4579999999854321    1123455788888888888777653  23589999987542111     


Q ss_pred             ccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      ......|+.+|.+.+.+++       ..|+++++||||+|+++...... ..    ........+++.+|+++++++++.
T Consensus       144 ~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~-~~----~~~~~~~~~~~~~~va~~~~~~~~  218 (238)
T PRK05786        144 SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERN-WK----KLRKLGDDMAPPEDFAKVIIWLLT  218 (238)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhh-hh----hhccccCCCCCHHHHHHHHHHHhc
Confidence            2345679999998876654       25899999999999987421100 00    001111235889999999999997


Q ss_pred             CCCC-CCCcEEEEeCC
Q 009648          298 NRSL-SYCKVVEVIAE  312 (530)
Q Consensus       298 ~~~~-~~g~vynv~~~  312 (530)
                      +... ..|+.+.+.++
T Consensus       219 ~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        219 DEADWVDGVVIPVDGG  234 (238)
T ss_pred             ccccCccCCEEEECCc
Confidence            6442 35666666544

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=1.1e-18  Score=171.08  Aligned_cols=207  Identities=14%  Similarity=0.111  Sum_probs=147.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~s  156 (530)
                      .++++++||||+|+||+++++.|+++|++|++++|+.....                      ..++.++.+|+.+. +.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~   60 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------------------SGNFHFLQLDLSDDLEP   60 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------------------CCcEEEEECChHHHHHH
Confidence            45679999999999999999999999999999999753210                      14688999999987 55


Q ss_pred             HHHHhCCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCCccccc
Q 009648          157 IEPALGNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                      +.+.++.+|+||||||....       +..++...+++|+.++.++++++..    .+.++||++||.......      
T Consensus        61 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  134 (235)
T PRK06550         61 LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------  134 (235)
T ss_pred             HHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------
Confidence            55566789999999985321       1223456689999999999888753    455699999997553221      


Q ss_pred             cchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-cccee-ecccCcccCCCCCHHHHHHHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                      .....|+.+|...+.+++.       .|+++++|+||++.++...... ..... ........+.+...+|+|+++++++
T Consensus       135 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  214 (235)
T PRK06550        135 GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLA  214 (235)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHc
Confidence            2234699999998876652       5899999999999887532110 00000 0011122344678999999999999


Q ss_pred             hCCC-CCCCcEEEEeCC
Q 009648          297 KNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       297 ~~~~-~~~g~vynv~~~  312 (530)
                      .+.. ...+.++.+.++
T Consensus       215 s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        215 SGKADYMQGTIVPIDGG  231 (235)
T ss_pred             ChhhccCCCcEEEECCc
Confidence            7642 345777777665

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.3e-18  Score=171.89  Aligned_cols=218  Identities=18%  Similarity=0.152  Sum_probs=154.3

Q ss_pred             CCCCEEEEECCCc-HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG-~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++||||||+| +||+++++.|+++|++|++++|+..+.+...+.+++.           ....++.++.+|+.|.++
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~   83 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE-----------LGLGRVEAVVCDVTSEAQ   83 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-----------cCCceEEEEEccCCCHHH
Confidence            4568999999997 7999999999999999999999987776665544321           011368899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~  218 (530)
                      +.+++       +.+|+||||||....      +..++...+++|+.+...+++++..    .+ .++||++||......
T Consensus        84 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~  163 (262)
T PRK07831         84 VDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA  163 (262)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence            77666       368999999995321      1123455688999999888887653    33 468999988654322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||.++++......... ..........+.+...+|+|+
T Consensus       164 ------~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~  237 (262)
T PRK07831        164 ------QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVAN  237 (262)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  12345699999999988762       6899999999999987432110000 000011222445678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++++.+.. ...|+++.+.++
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~~  260 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSSQ  260 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCCC
Confidence            9999997643 345777766653

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.80  E-value=4e-18  Score=170.17  Aligned_cols=219  Identities=25%  Similarity=0.229  Sum_probs=168.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||||||||+++|++|+++|++|++++|+.++...+.                    .+++++.+|+.+..++..+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------------------~~v~~~~~d~~~~~~l~~a   60 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------------------GGVEVVLGDLRDPKSLVAG   60 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------------------CCcEEEEeccCCHhHHHHH
Confidence            47999999999999999999999999999999998777641                    5789999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      ++|+|.++++.+... ...   ........+..+..+++. .++++++++|..+....        ....|..+|...|+
T Consensus        61 ~~G~~~~~~i~~~~~-~~~---~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~~--------~~~~~~~~~~~~e~  127 (275)
T COG0702          61 AKGVDGVLLISGLLD-GSD---AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADAA--------SPSALARAKAAVEA  127 (275)
T ss_pred             hccccEEEEEecccc-ccc---chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCCC--------CccHHHHHHHHHHH
Confidence            999999999987543 211   223344555555555555 56789999999876332        23469999999999


Q ss_pred             HHHHCCCCEEEEEcCcccC-CCcccc---cccc-eeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          241 ALIASGLPYTIVRPGGMER-PTDAYK---ETHN-ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~G-p~~~~~---~~~~-~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      .+++.|+.++++|+..+|. ....+.   .... ........ ....+.++|+++++...+..+. ..+++|.+.++...
T Consensus       128 ~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~d~a~~~~~~l~~~~-~~~~~~~l~g~~~~  205 (275)
T COG0702         128 ALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIG-RLSPIAVDDVAEALAAALDAPA-TAGRTYELAGPEAL  205 (275)
T ss_pred             HHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCC-ceeeeEHHHHHHHHHHHhcCCc-ccCcEEEccCCcee
Confidence            9999999999999655554 333210   1111 11111111 2356899999999999999886 67999999999888


Q ss_pred             ChhHHHHHHHhcCCCCCCC
Q 009648          316 PLTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       316 t~~~i~ell~~v~g~~~~~  334 (530)
                      +..++.+.+....++....
T Consensus       206 ~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         206 TLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             cHHHHHHHHHHHhCCccee
Confidence            9999999999998877654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=2.1e-18  Score=174.58  Aligned_cols=216  Identities=12%  Similarity=0.089  Sum_probs=147.6

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|+||||||+  ++||+++++.|+++|++|++++|+....+.+.+...+.         +    .. .++.+|++|.+
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~---------~----~~-~~~~~Dv~d~~   68 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL---------G----SD-YVYELDVSKPE   68 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------C----Cc-eEEEecCCCHH
Confidence            356899999997  79999999999999999999999853222221111111         1    22 57889999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++.+++       +.+|++|||||....          +..++...+++|+.+...+.+++...  .-++||++||.+..
T Consensus        69 ~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~  148 (274)
T PRK08415         69 HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV  148 (274)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc
Confidence            877665       468999999996421          12234567999999998888877642  22589999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+       ..|++++.|.||+|.++........ .. .........+.+...+|
T Consensus       149 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~ped  222 (274)
T PRK08415        149 KY------VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEE  222 (274)
T ss_pred             cC------CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHH
Confidence            21      1234579999999887765       2689999999999987532110000 00 00001112234578999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ||+++++++.+. ....|+++.+.++.
T Consensus       223 va~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        223 VGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            999999999864 33467777777764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.80  E-value=4e-18  Score=172.24  Aligned_cols=218  Identities=15%  Similarity=0.154  Sum_probs=152.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+++|||| |+||+++++.|. +|++|++++|+.++.+.+.++++..             ..++.++.+|+.|.+++.+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~i~~   66 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-------------GFDVSTQEVDVSSRESVKA   66 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEeecCCHHHHHH
Confidence            568999998 799999999996 8999999999987766655544321             1468899999999988877


Q ss_pred             Hh------CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC-----------
Q 009648          160 AL------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF-----------  220 (530)
Q Consensus       160 a~------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~-----------  220 (530)
                      ++      +.+|+||||||... ...++...+++|+.++.++++++...  ..+++|++||........           
T Consensus        67 ~~~~~~~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         67 LAATAQTLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             HHHHHHhcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccc
Confidence            76      35899999999653 23456778999999999999988753  224678888865432210           


Q ss_pred             -------------ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc---c-eeecccC
Q 009648          221 -------------PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH---N-ITLSQED  276 (530)
Q Consensus       221 -------------~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~---~-~~~~~~~  276 (530)
                                   +......+..|+.+|++.+.+.+       ..|++++.|+||++.++........   . .......
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~  225 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK  225 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh
Confidence                         00000235679999999887765       2689999999999988742110000   0 0000011


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          277 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       277 ~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ...+.+...+|||+++++++.+. .+..|.++.+.++.
T Consensus       226 ~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        226 SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA  263 (275)
T ss_pred             CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence            12345678999999999999753 33467778776663

>PRK08324 short chain dehydrogenase; Validated

Probab=99.80  E-value=2e-18  Score=195.60  Aligned_cols=217  Identities=17%  Similarity=0.184  Sum_probs=157.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+..              ..++.++.+|++|.+++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~--------------~~~v~~v~~Dvtd~~~v  485 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG--------------PDRALGVACDVTDEAAV  485 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc--------------cCcEEEEEecCCCHHHH
Confidence            4568999999999999999999999999999999998776655443221              14788999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCC-CEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv-~r~V~iSS~~v~~~~  219 (530)
                      .+++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+. ++||++||..+...+
T Consensus       486 ~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~  565 (681)
T PRK08324        486 QAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG  565 (681)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC
Confidence            7766       378999999995432      222345668899999999977764    4444 699999997653321


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCccc-CCCccccc-------cccee------ecccCcc
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKE-------THNIT------LSQEDTL  278 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~-Gp~~~~~~-------~~~~~------~~~~~~~  278 (530)
                            .....|+.+|.+.+.+++.       .|+++++|+||+|| +.+.....       ...+.      .......
T Consensus       566 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  639 (681)
T PRK08324        566 ------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNL  639 (681)
T ss_pred             ------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCC
Confidence                  2356799999999988763       47999999999997 44311100       00000      1112233


Q ss_pred             cCCCCCHHHHHHHHHHHHhC-CCCCCCcEEEEeCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKN-RSLSYCKVVEVIAETT  314 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~-~~~~~g~vynv~~~~~  314 (530)
                      ...+++.+|+|+++++++.. .....|++|++.++..
T Consensus       640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence            44579999999999999852 2224688999988764

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.80  E-value=5.4e-18  Score=168.68  Aligned_cols=213  Identities=17%  Similarity=0.137  Sum_probs=147.8

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCc-----------hhHHHHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSV-----------QRAENLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~-----------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      .++++||||||+|  +||.++++.|+++|++|++++|++           .....+.+.+...             ..++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   69 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-------------GVRC   69 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-------------CCeE
Confidence            3467899999995  799999999999999999999972           1111122222111             2468


Q ss_pred             EEEEecCCCHhhHHHHh-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhc----CCCEE
Q 009648          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA----KVNHF  207 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~  207 (530)
                      +++.+|+.|.+++..++       ..+|+||||||......      .++...+++|+.++.++++++...    +.++|
T Consensus        70 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  149 (256)
T PRK12748         70 EHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRI  149 (256)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEE
Confidence            99999999988876655       35799999998643221      223455889999999999987643    45699


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccC
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG  280 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~  280 (530)
                      |++||......      ......|+.+|++.+.+++.       .|++++.|+||.+.++.........+   .......
T Consensus       150 v~~ss~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~---~~~~~~~  220 (256)
T PRK12748        150 INLTSGQSLGP------MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHL---VPKFPQG  220 (256)
T ss_pred             EEECCccccCC------CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhh---hccCCCC
Confidence            99999755322      22346799999999987653       58999999999987763211100000   0111112


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      .+...+|+|+++.+++.... ...++++++.++
T Consensus       221 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             CCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            34678999999999887643 235788888665

>TIGR02415 23BDH acetoin reductases

Probab=99.80  E-value=1.6e-18  Score=171.62  Aligned_cols=213  Identities=16%  Similarity=0.155  Sum_probs=148.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++++||||+|+||.+|++.|+++|++|+++.|+......+.+.+...             ..++.++.+|+.|.+++.++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~i~~~   67 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-------------GGKAVAYKLDVSDKDQVFSA   67 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHHHHHHH
Confidence            47999999999999999999999999999999977666655544322             24688999999999988776


Q ss_pred             h-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCEEEEEcCCCccCCCCcc
Q 009648          161 L-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r~V~iSS~~v~~~~~~~  222 (530)
                      +       ..+|+||||+|....      +..++...+++|+.++..+++++.    +.+ .++||++||...... .  
T Consensus        68 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~--  144 (254)
T TIGR02415        68 IDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG-N--  144 (254)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC-C--
Confidence            5       357999999986432      222345668899999887766654    333 369999999755321 1  


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-----ceeec------ccCcccCCCCC
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-----NITLS------QEDTLFGGQVS  284 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-----~~~~~------~~~~~~~g~V~  284 (530)
                         .....|+.+|++.+.+++.       .++++++|+||++.++........     ...+.      ......+.+++
T Consensus       145 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T TIGR02415       145 ---PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE  221 (254)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence               2345799999999887752       489999999999977642111000     00000      00112234688


Q ss_pred             HHHHHHHHHHHHhCCCC-CCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRSL-SYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~-~~g~vynv~~~  312 (530)
                      ++|+++++.+++.+... ..|.++.+.++
T Consensus       222 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       222 PEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            99999999999987642 23555544443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.80  E-value=2.9e-18  Score=168.48  Aligned_cols=207  Identities=12%  Similarity=0.068  Sum_probs=144.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+++|++|++++|+......   .+..               .+++++.+|+.|.+++.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~---------------~~~~~~~~D~~~~~~~~~   63 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQ---------------AGAQCIQADFSTNAGIMA   63 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHH---------------cCCEEEEcCCCCHHHHHH
Confidence            5689999999999999999999999999999998754322   2211               236789999999888766


Q ss_pred             Hh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cC--CCEEEEEcCCCccCCCC
Q 009648          160 AL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~g--v~r~V~iSS~~v~~~~~  220 (530)
                      ++       +++|+||||||.....      ..++...+++|+.++..+.+++..    .+  .++||++||......  
T Consensus        64 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~--  141 (236)
T PRK06483         64 FIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG--  141 (236)
T ss_pred             HHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC--
Confidence            55       4589999999964221      223456688999998877666553    33  468999998754221  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                          ...+..|+.+|++.+.+++.      .++++++|+||++..............  ......+.....+|||+++.+
T Consensus       142 ----~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~va~~~~~  215 (236)
T PRK06483        142 ----SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKA--LAKSLLKIEPGEEEIIDLVDY  215 (236)
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHH--hccCccccCCCHHHHHHHHHH
Confidence                12345799999999988763      369999999999854321100000000  011122334678999999999


Q ss_pred             HHhCCCCCCCcEEEEeCCC
Q 009648          295 MAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~~  313 (530)
                      ++.+. ...|+++.+.++.
T Consensus       216 l~~~~-~~~G~~i~vdgg~  233 (236)
T PRK06483        216 LLTSC-YVTGRSLPVDGGR  233 (236)
T ss_pred             HhcCC-CcCCcEEEeCccc
Confidence            99754 3578888887764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.6e-18  Score=170.83  Aligned_cols=212  Identities=14%  Similarity=0.089  Sum_probs=146.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||++++++|+++|++|++++|+..+.+.+.+.+                  ...++.+|+.|.+++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~   66 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV------------------GGLFVPTDVTDEDAV   66 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc------------------CCcEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999876655433211                  125788999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      .++++       ++|+||||||.....        ..++...+++|+.++.++++++.    +.+.++||++||.... +
T Consensus        67 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~-~  145 (255)
T PRK06057         67 NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAV-M  145 (255)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhc-c
Confidence            77774       579999999864211        11245668899999887777654    4556799999996432 2


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccce-eec--ccCcccCCCCCHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLS--QEDTLFGGQVSNLQV  288 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~--~~~~~~~g~V~v~DV  288 (530)
                      +.    ......|+.+|++.+.+++       ..|+++++||||++.++.......... ...  ......+.+.+++|+
T Consensus       146 g~----~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
T PRK06057        146 GS----ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEI  221 (255)
T ss_pred             CC----CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence            11    1234569999987765554       258999999999999875321110000 000  001112356889999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |++++.++.+.. ...+..+.+.++
T Consensus       222 a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        222 AAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHhCccccCccCcEEEECCC
Confidence            999999887643 334677766654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.80  E-value=5.2e-18  Score=169.51  Aligned_cols=198  Identities=17%  Similarity=0.126  Sum_probs=144.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++...+..++.              ...++.++.+|+.|.+++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~D~~d~~~~   68 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP--------------YPGRHRWVVADLTSEAGR   68 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh--------------cCCceEEEEccCCCHHHH
Confidence            346789999999999999999999999999999999877766554331              125789999999999887


Q ss_pred             HHHh------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCCc
Q 009648          158 EPAL------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ..++      +.+|+||||||.....      ..++...+++|+.++.++++++..    .+.++||++||..... +. 
T Consensus        69 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~-  146 (263)
T PRK09072         69 EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSI-GY-  146 (263)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCc-CC-
Confidence            7665      4689999999864321      122345678999999999888754    3456899999865422 11 


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                          .....|+.+|.+.+.+++       ..|+++++|.||++.++...... .    ..........++.+|+|+++++
T Consensus       147 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~-~----~~~~~~~~~~~~~~~va~~i~~  217 (263)
T PRK09072        147 ----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV-Q----ALNRALGNAMDDPEDVAAAVLQ  217 (263)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc-c----cccccccCCCCCHHHHHHHHHH
Confidence                224569999998876664       26899999999999776421100 0    0001111235789999999999


Q ss_pred             HHhCCC
Q 009648          295 MAKNRS  300 (530)
Q Consensus       295 ll~~~~  300 (530)
                      +++++.
T Consensus       218 ~~~~~~  223 (263)
T PRK09072        218 AIEKER  223 (263)
T ss_pred             HHhCCC
Confidence            999865

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.80  E-value=2.1e-18  Score=172.37  Aligned_cols=214  Identities=16%  Similarity=0.067  Sum_probs=150.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.                ...++.++.+|+.|.+++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----------------~~~~~~~~~~D~~~~~~~   66 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----------------HGDAVVGVEGDVRSLDDH   66 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----------------cCCceEEEEeccCCHHHH
Confidence            3568999999999999999999999999999999988766554321                014688899999998877


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-----c-c-----CCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEK-----E-V-----FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-----~-~-----~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~  216 (530)
                      .+++       +.+|+||||||....     + .     .++...+++|+.++.++++++...   ..+++|++||....
T Consensus        67 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~  146 (262)
T TIGR03325        67 KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF  146 (262)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee
Confidence            6655       467999999985321     0 0     124567899999999999888642   22579998887553


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccc---cc----ceee---cccCcccC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE---TH----NITL---SQEDTLFG  280 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~---~~----~~~~---~~~~~~~~  280 (530)
                      ..      ......|+.+|.+.+.+++.      ..++++.|+||+|.++......   ..    ....   .......+
T Consensus       147 ~~------~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  220 (262)
T TIGR03325       147 YP------NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIG  220 (262)
T ss_pred             cC------CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCC
Confidence            21      12245799999999988763      2489999999999876421100   00    0000   00111234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~--~~~g~vynv~~~~  313 (530)
                      .+...+|+|+++++++.+..  ...|.++.+.++.
T Consensus       221 r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~  255 (262)
T TIGR03325       221 RMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGM  255 (262)
T ss_pred             CCCChHHhhhheeeeecCCCcccccceEEEecCCe
Confidence            55789999999999997632  2467788777663

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=4.2e-18  Score=172.03  Aligned_cols=216  Identities=12%  Similarity=0.113  Sum_probs=149.1

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|++|||||+  ++||+++++.|+++|++|+++.|+....+.+.+..+++              ..+.++.+|+.|.+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--------------~~~~~~~~Dl~~~~   73 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--------------GAFVAGHCDVTDEA   73 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--------------CCceEEecCCCCHH
Confidence            456899999997  89999999999999999999888642222221111111              23567899999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++++++       +.+|++|||||....          +..++...+++|+.++..+++++...  +.++||++||.+..
T Consensus        74 ~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~  153 (272)
T PRK08159         74 SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE  153 (272)
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc
Confidence            887766       458999999996421          22235667999999999999887753  33699999997553


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-e-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-I-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+.       .|++++.|.||+|.++......... . .........+.+...+|
T Consensus       154 ~~------~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee  227 (272)
T PRK08159        154 KV------MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEE  227 (272)
T ss_pred             cC------CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHH
Confidence            21      22345799999998877752       6899999999999775321110000 0 00001122334578999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ||+++++++.+.. ...|.++.+.++.
T Consensus       228 vA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        228 VGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHHHhCccccCccceEEEECCCc
Confidence            9999999997643 3467778777764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.80  E-value=1.4e-18  Score=173.73  Aligned_cols=209  Identities=14%  Similarity=0.109  Sum_probs=148.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+.+++||||||+|+||+++++.|+++|++|++++|+..+..                      ..++.++.+|+.|.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------------------~~~~~~~~~D~~~~~~   63 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------------------HENYQFVPTDVSSAEE   63 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------------------cCceEEEEccCCCHHH
Confidence            355789999999999999999999999999999999875321                      1467889999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC---------------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEE
Q 009648          157 IEPAL-------GNASVVICCIGASEK---------------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMV  210 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~---------------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~i  210 (530)
                      +++++       ..+|+||||||....               ...++...+++|+.++.++++++..    .+.++||++
T Consensus        64 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~i  143 (266)
T PRK06171         64 VNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNM  143 (266)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEE
Confidence            87766       358999999995321               1122345688999999999888764    345689999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCccc-CCCccc--cccc----c-----e-
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAY--KETH----N-----I-  270 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~-Gp~~~~--~~~~----~-----~-  270 (530)
                      ||......      ......|+.+|.+.+.+++.       .|+++++|+||++. .+....  ....    .     + 
T Consensus       144 sS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~  217 (266)
T PRK06171        144 SSEAGLEG------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLR  217 (266)
T ss_pred             ccccccCC------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHH
Confidence            99765322      12345799999999887653       68999999999985 222110  0000    0     0 


Q ss_pred             -eecc-cCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          271 -TLSQ-EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       271 -~~~~-~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                       .+.. .....+.....+|||+++.+++.+.. ...|+++++.++.
T Consensus       218 ~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        218 AGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             hhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence             0000 01223445788999999999997543 3467778777653

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.80  E-value=3.1e-18  Score=171.70  Aligned_cols=216  Identities=13%  Similarity=0.104  Sum_probs=145.8

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++++||||||  +++||+++++.|+++|++|++..|+. +.....+++...             ......+.+|+.|.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~   69 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE-------------LDSELVFRCDVASDD   69 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc-------------cCCceEEECCCCCHH
Confidence            45789999997  67999999999999999999988763 222222222211             123457899999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCc-----------cCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~-----------~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~  214 (530)
                      ++++++       +++|++|||||.....           ..++...+++|+.+...+.+++..   .+.++||++||.+
T Consensus        70 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~  149 (261)
T PRK08690         70 EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLG  149 (261)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccc
Confidence            887766       4689999999964321           112344578888888777776543   1236899999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-ccee-ecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~~-~~~~~~~~~g~V~v  285 (530)
                      ....      ...+..|+.+|++.+.+.+       ..|++++.|.||+|.++....... .... ........+.+...
T Consensus       150 ~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  223 (261)
T PRK08690        150 AVRA------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTI  223 (261)
T ss_pred             cccC------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCH
Confidence            5321      1234579999999987765       368999999999998763211100 0000 00111223456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|||+++++++.+. ....|+++.+.++.
T Consensus       224 eevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        224 EEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            99999999999864 33467777776654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.9e-18  Score=169.35  Aligned_cols=217  Identities=17%  Similarity=0.109  Sum_probs=149.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++++||||+|+||+++++.|+++|++|++++|+... ....+.+...             ..++.++.+|+.|.+++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~v   69 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGR-------------GHRCTAVVADVRDPASV   69 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHh-------------CCceEEEECCCCCHHHH
Confidence            456899999999999999999999999999999998642 2222222211             14678899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       .+|+||||||.....      ..++...+++|+.++.++++++..    .+.++||++||....... 
T Consensus        70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-  148 (263)
T PRK08226         70 AAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA-  148 (263)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC-
Confidence            77664       679999999964221      112344588999999998888653    455799999996542221 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc------ccc--eeecccCcccCCCCCH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE------THN--ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~------~~~--~~~~~~~~~~~g~V~v  285 (530)
                          ......|+.+|...+.+++.       .|++++.|+||++.++......      ...  +.........+.+...
T Consensus       149 ----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  224 (263)
T PRK08226        149 ----DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADP  224 (263)
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCH
Confidence                12345699999998877752       4899999999999887321100      000  0000111123345789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|+|+++.+++... ....|+++.+.++.
T Consensus       225 ~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        225 LEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             HHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence            99999999998653 33457777776653

>PRK06484 short chain dehydrogenase; Validated

Probab=99.79  E-value=1.9e-18  Score=189.55  Aligned_cols=215  Identities=17%  Similarity=0.171  Sum_probs=156.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++..+.+|+.|.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~  329 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----------------GDEHLSVQADITDEAA  329 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceeEEEccCCCHHH
Confidence            346789999999999999999999999999999999987766654321                1356778999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      +.+++       +.+|+||||||....       +..++...+++|+.++.++++++...  +.++||++||......  
T Consensus       330 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  407 (520)
T PRK06484        330 VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA--  407 (520)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC--
Confidence            87766       358999999996421       12234567899999999999887753  3469999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ceee--cccCcccCCCCCHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITL--SQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~--~~~~~~~~g~V~v~DVA~  290 (530)
                          ......|+.+|+..+.+++.       .|++++.|+||+|.++........ ....  .......+.+...+|+|+
T Consensus       408 ----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~  483 (520)
T PRK06484        408 ----LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAE  483 (520)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                22346799999999977753       589999999999988743211000 0000  001112234578999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++++.+. ....|+++.+.++.
T Consensus       484 ~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        484 AIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             HHHHHhCccccCccCcEEEECCCc
Confidence            999999754 33467888877663

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.79  E-value=6.3e-18  Score=166.35  Aligned_cols=195  Identities=17%  Similarity=0.156  Sum_probs=140.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--Hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~  155 (530)
                      +.+++|+||||+|+||+++++.|+++|++|++++|+.++...+.+++.+.         +   ...+.++.+|+.|  .+
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~D~~~~~~~   71 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA---------G---HPEPFAIRFDLMSAEEK   71 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc---------C---CCCcceEEeeecccchH
Confidence            45689999999999999999999999999999999998777665544322         1   1356788899875  23


Q ss_pred             hHHHH-------h-CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCcc
Q 009648          156 QIEPA-------L-GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a-------~-~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~  216 (530)
                      ++.++       + .++|+||||||....       ...++...+++|+.++.++++++.+    .+.++||++||....
T Consensus        72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~  151 (239)
T PRK08703         72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE  151 (239)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence            33332       3 568999999995321       1122344689999998888877753    355799999996542


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------C-CCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~-gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      ..      ...+..|+.+|++++.+++.       . ++++++|+||+|+++......        .......+...+|+
T Consensus       152 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~  217 (239)
T PRK08703        152 TP------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH--------PGEAKSERKSYGDV  217 (239)
T ss_pred             cC------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC--------CCCCccccCCHHHH
Confidence            21      22345799999999988752       2 699999999999988532110        01112245789999


Q ss_pred             HHHHHHHHhC
Q 009648          289 AELLACMAKN  298 (530)
Q Consensus       289 A~ai~~ll~~  298 (530)
                      +.++++++..
T Consensus       218 ~~~~~~~~~~  227 (239)
T PRK08703        218 LPAFVWWASA  227 (239)
T ss_pred             HHHHHHHhCc
Confidence            9999999975

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.79  E-value=4.6e-18  Score=171.01  Aligned_cols=202  Identities=18%  Similarity=0.158  Sum_probs=141.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...         +   ...+.++.+|+.|.+++.++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~D~~~~~~~~~~   68 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL---------G---GTVPEHRALDISDYDAVAAF   68 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C---CCcceEEEeeCCCHHHHHHH
Confidence            47999999999999999999999999999999987766655444322         1   12356678999998877655


Q ss_pred             h-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----c-CCCEEEEEcCCCccCCCCcc
Q 009648          161 L-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----A-KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~-gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +       +++|+||||+|....      +..++...+++|+.++.++++++..    . ..++||++||..... +   
T Consensus        69 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~-~---  144 (272)
T PRK07832         69 AADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-A---  144 (272)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC-C---
Confidence            5       458999999986422      2223456689999999999998642    2 346999999975422 1   


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-----ce-eecccCcccCCCCCHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----NI-TLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-----~~-~~~~~~~~~~g~V~v~DVA  289 (530)
                        ......|+.+|.+.+.+.+       ..|+++++|+||++.++........     .. .........+..++.+|+|
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  222 (272)
T PRK07832        145 --LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA  222 (272)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence              1234569999997776553       3789999999999998743211000     00 0000011223458999999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      ++++.+++++.
T Consensus       223 ~~~~~~~~~~~  233 (272)
T PRK07832        223 EKILAGVEKNR  233 (272)
T ss_pred             HHHHHHHhcCC
Confidence            99999997654

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.4e-18  Score=167.60  Aligned_cols=218  Identities=15%  Similarity=0.097  Sum_probs=154.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+...            ...++.++.+|++|.+++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~D~~~~~~~   72 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA------------HGVDVAVHALDLSSPEAR   72 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence            35689999999999999999999999999999999988776655544321            124688999999999888


Q ss_pred             HHHh---CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~---~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      ..++   +.+|+||||+|....      +..++...+++|+.+..++++++.    +.+.++||++||......      
T Consensus        73 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------  146 (259)
T PRK06125         73 EQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP------  146 (259)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC------
Confidence            7766   468999999996422      222345668899999888877763    444568999998755321      


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc---cc------c-ceeecccCcccCCCCCHHH
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK---ET------H-NITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~---~~------~-~~~~~~~~~~~~g~V~v~D  287 (530)
                      ...+..|..+|.+.+.+++.       .|++++.|+||++.++.....   ..      . ...........+.+.+.+|
T Consensus       147 ~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (259)
T PRK06125        147 DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEE  226 (259)
T ss_pred             CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHH
Confidence            22355689999998877663       589999999999987631100   00      0 0000001112344678999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +|+++++++.+.. ...|.++.+.++.
T Consensus       227 va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        227 VADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             HHHHHHHHcCchhccccCceEEecCCe
Confidence            9999999997542 2457777777664

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.79  E-value=7.9e-18  Score=169.73  Aligned_cols=199  Identities=10%  Similarity=0.059  Sum_probs=141.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH-------HHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~-------~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.+..       ..+.+.+...             ..++.++.+|
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~D   70 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-------------GGQALPLVGD   70 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-------------CCceEEEEec
Confidence            4568999999999999999999999999999999986532       2222222111             2468899999


Q ss_pred             CCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCC
Q 009648          151 LEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSL  213 (530)
Q Consensus       151 l~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~  213 (530)
                      ++|.+++.++++       ++|+||||||....      ...++...+++|+.++.++++++..    .+.++||++||.
T Consensus        71 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~  150 (273)
T PRK08278         71 VRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP  150 (273)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence            999998877664       68999999996422      1122455688999999999999863    344689999986


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCc-ccCCCcccccccceeecccCcccCCCCCH
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~-V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v  285 (530)
                      .....    .....+..|+.+|.++|.+++.       .|++++.|+||+ +..+....     +.  ............
T Consensus       151 ~~~~~----~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-----~~--~~~~~~~~~~~p  219 (273)
T PRK08278        151 LNLDP----KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-----LL--GGDEAMRRSRTP  219 (273)
T ss_pred             hhccc----cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-----cc--cccccccccCCH
Confidence            43211    0113456799999999988763       589999999995 44432110     00  111122345789


Q ss_pred             HHHHHHHHHHHhCCC
Q 009648          286 LQVAELLACMAKNRS  300 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~  300 (530)
                      +|+|+++++++....
T Consensus       220 ~~va~~~~~l~~~~~  234 (273)
T PRK08278        220 EIMADAAYEILSRPA  234 (273)
T ss_pred             HHHHHHHHHHhcCcc
Confidence            999999999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.79  E-value=5.1e-18  Score=169.81  Aligned_cols=217  Identities=15%  Similarity=0.151  Sum_probs=148.2

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++++||||+  ++||++++++|+++|++|+++.|+.+  +.....+++.+.         +    ..+.++.+|+.|
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~d   70 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---------L----NPSLFLPCDVQD   70 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc---------c----CcceEeecCcCC
Confidence            457899999986  79999999999999999998877543  222222222211         1    346788999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      .+++++++       +.+|++|||||....          +..++...+++|+.++..+++++...  ..++||++||..
T Consensus        71 ~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~  150 (258)
T PRK07370         71 DAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG  150 (258)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence            98887666       468999999996421          12234667899999988888876532  226999999976


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cceeecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~~~~~~~~~~~~g~V~v  285 (530)
                      ....      ...+..|+.+|++.+.+.+.       .|++++.|.||+|.++.......  ............+.+...
T Consensus       151 ~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~  224 (258)
T PRK07370        151 GVRA------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQ  224 (258)
T ss_pred             cccC------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCH
Confidence            5321      22345799999999887762       68999999999998763211100  000000111223345778


Q ss_pred             HHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +|||+++++++.+.. ...|+++.+.++.
T Consensus       225 ~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        225 TEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             HHHHHHHHHHhChhhccccCcEEEECCcc
Confidence            999999999997543 3457777776653

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=5.8e-18  Score=169.63  Aligned_cols=216  Identities=10%  Similarity=0.081  Sum_probs=147.0

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|++|||||++  +||+++++.|+++|++|++.+|+. +.....+.+.+.             .+...++.+|+.|.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~-------------~g~~~~~~~Dv~~~~   71 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE-------------IGCNFVSELDVTNPK   71 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh-------------cCCceEEEccCCCHH
Confidence            4568999999997  899999999999999999998874 222222222211             022346789999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++++++       +.+|++|||||....          +..++...+++|+.+...+++++...  .-++||++||.+..
T Consensus        72 ~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~  151 (260)
T PRK06603         72 SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE  151 (260)
T ss_pred             HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc
Confidence            877666       458999999985321          12234567899999999988876532  22589999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+       ..|++++.|.||+|.++....... ... .........+.+...+|
T Consensus       152 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  225 (260)
T PRK06603        152 KV------IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQED  225 (260)
T ss_pred             cC------CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHH
Confidence            21      1224579999999887765       378999999999997763211000 000 00001122344578999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ||+++++++.+.. +..|+++.+.++.
T Consensus       226 va~~~~~L~s~~~~~itG~~i~vdgG~  252 (260)
T PRK06603        226 VGGAAVYLFSELSKGVTGEIHYVDCGY  252 (260)
T ss_pred             HHHHHHHHhCcccccCcceEEEeCCcc
Confidence            9999999998643 3457777776653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=4.8e-18  Score=170.78  Aligned_cols=215  Identities=12%  Similarity=0.101  Sum_probs=146.9

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|+++||||++  +||+++++.|+++|++|++++|+. +.....+++...             .+.+.++.+|+.|.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   69 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ-------------LGSDIVLPCDVAEDA   69 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhc-------------cCCceEeecCCCCHH
Confidence            4578999999985  999999999999999999999873 333322322211             134678899999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCc-----------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          156 QIEPAL-------GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~-----------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      ++++++       +.+|++|||||.....           ..++...+++|+.+...+.+++...  +.++||++||.+.
T Consensus        70 ~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~  149 (262)
T PRK07984         70 SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  149 (262)
T ss_pred             HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC
Confidence            887766       3589999999954221           1123455788999888888776532  2268999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-cee-ecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NIT-LSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~-~~~~~~~~~g~V~v~  286 (530)
                      ...      ...+..|+.+|.+.+.+++.       .|++++.|.||+|..+........ ... ........+.+...+
T Consensus       150 ~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  223 (262)
T PRK07984        150 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  223 (262)
T ss_pred             CCC------CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH
Confidence            321      22345799999999888762       689999999999977521100000 000 000112234567899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      |||+++++++.+. .+..|.++.+.++
T Consensus       224 dva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        224 DVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHHHHHcCcccccccCcEEEECCC
Confidence            9999999999764 3346777777665

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.79  E-value=6.8e-18  Score=167.96  Aligned_cols=214  Identities=13%  Similarity=0.056  Sum_probs=149.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||++++++|+++|++|++++|+..  ....+.+.+.             ..++.++++|+.|.+++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~   72 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-------------GRRFLSLTADLRKIDGI   72 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-------------CCeEEEEECCCCCHHHH
Confidence            55789999999999999999999999999999887642  2222222221             14678899999998888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .++||++||.......
T Consensus        73 ~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  152 (253)
T PRK08993         73 PALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG  152 (253)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC
Confidence            77663       68999999996422      2234567799999999998888753    22 3589999997653221


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ce-eecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~-~~~~~~~~~~g~V~v~DVA~  290 (530)
                            ..+..|+.+|.+.+.+.+.       .|++++.|+||++.++........ .. .........+.+...+|+|+
T Consensus       153 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~  226 (253)
T PRK08993        153 ------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMG  226 (253)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  1234699999998877652       689999999999987643211000 00 00011122345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++++.+.. ...|.++.+.++
T Consensus       227 ~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        227 PVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHhCccccCccCcEEEECCC
Confidence            9999998653 235677766554

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.7e-18  Score=171.36  Aligned_cols=208  Identities=16%  Similarity=0.111  Sum_probs=140.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+||||||+|+||++++++|+++|++|++++|+.. ....+.+                ....+++++.+|++|.+++.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~----------------~~~~~~~~~~~D~~~~~~~~~   65 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE----------------QYNSNLTFHSLDLQDVHELET   65 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh----------------ccCCceEEEEecCCCHHHHHH
Confidence            68999999999999999999999999999999873 3332211                112578899999999988887


Q ss_pred             HhCCC---------c--EEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----Hhc-CCCEEEEEcCCCcc
Q 009648          160 ALGNA---------S--VVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIA-KVNHFIMVSSLGTN  216 (530)
Q Consensus       160 a~~~v---------D--~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~-gv~r~V~iSS~~v~  216 (530)
                      +++.+         +  ++|||+|....       +..++...+++|+.+...+++.+    ++. +.++||++||..+.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  145 (251)
T PRK06924         66 NFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK  145 (251)
T ss_pred             HHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc
Confidence            77432         2  78999985321       12223455778888866555554    443 34689999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCccccc---cccee---ecccCcccCC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKE---THNIT---LSQEDTLFGG  281 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~---~~~~~---~~~~~~~~~g  281 (530)
                      ..      ......|+.+|++.+.+++.         .+++++.|+||++.++......   .....   ........+.
T Consensus       146 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK06924        146 NP------YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGK  219 (251)
T ss_pred             CC------CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCC
Confidence            22      34456899999999988752         4799999999999766421100   00000   0000011234


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVI  310 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~  310 (530)
                      +.+.+|+|+.+++++.+.....|+.+.+.
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v~  248 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDID  248 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeehh
Confidence            68999999999999987554456665543

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.79  E-value=8.5e-18  Score=168.53  Aligned_cols=215  Identities=12%  Similarity=0.107  Sum_probs=145.5

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+++||||||  +++||+++++.|+++|++|+++.|.....+.+. .+.+.             .+...++.+|+.|.+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~~Dv~d~~   69 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRIT-EFAAE-------------FGSDLVFPCDVASDE   69 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHH-HHHHh-------------cCCcceeeccCCCHH
Confidence            45689999996  679999999999999999999876522122221 11111             022346889999999


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC-----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~-----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      ++++++       +.+|++|||||....           +..++...+++|+.+...+++++...  +.++||++||.+.
T Consensus        70 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~  149 (260)
T PRK06997         70 QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA  149 (260)
T ss_pred             HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc
Confidence            887766       468999999996421           11234556899999999888887643  3368999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-ccee-ecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~-~~~~~~~~~g~V~v~  286 (530)
                      ...      ...+..|+.+|++.+.+.+.       .|++++.|.||+|.++....... .... ........+.+...+
T Consensus       150 ~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  223 (260)
T PRK06997        150 ERV------VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIE  223 (260)
T ss_pred             ccC------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHH
Confidence            321      12245699999999877652       68999999999997753211000 0000 000111234457899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      |||+++++++.+. ....|+++.+.++
T Consensus       224 dva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        224 EVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHHHHhCccccCcceeEEEEcCC
Confidence            9999999999864 3356777777665

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.78  E-value=6.6e-18  Score=165.52  Aligned_cols=193  Identities=13%  Similarity=0.043  Sum_probs=144.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+++||||+|+||+++++.|+++|++|++++|+.++...+.+.                  .+++++.+|+.|.+++.++
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v~~~   62 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE------------------LDVDAIVCDNTDPASLEEA   62 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------------------ccCcEEecCCCCHHHHHHH
Confidence            3699999999999999999999999999999998766554321                  1357888999999988877


Q ss_pred             hC----CCcEEEEcccCCC----C-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccc
Q 009648          161 LG----NASVVICCIGASE----K-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       161 ~~----~vD~VI~~Ag~~~----~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      ++    .+|++|||||...    .       ...++...+++|+.++.++++++...  ..++||++||...        
T Consensus        63 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------  134 (223)
T PRK05884         63 RGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------  134 (223)
T ss_pred             HHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------
Confidence            74    5899999998421    0       12345677899999999999987642  2369999998652        


Q ss_pred             cccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                        .....|+.+|++.+.+.+       ..|++++.|.||++..+.....       .  ..   .....+|+++++.+++
T Consensus       135 --~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-------~--~~---p~~~~~~ia~~~~~l~  200 (223)
T PRK05884        135 --PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-------S--RT---PPPVAAEIARLALFLT  200 (223)
T ss_pred             --CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-------c--CC---CCCCHHHHHHHHHHHc
Confidence              113569999999887765       2689999999999976532100       0  00   1126899999999998


Q ss_pred             hCC-CCCCCcEEEEeCCC
Q 009648          297 KNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       297 ~~~-~~~~g~vynv~~~~  313 (530)
                      ... ....|+++.+.++.
T Consensus       201 s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        201 TPAARHITGQTLHVSHGA  218 (223)
T ss_pred             CchhhccCCcEEEeCCCe
Confidence            764 33467777776654

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=9e-18  Score=168.05  Aligned_cols=217  Identities=13%  Similarity=0.123  Sum_probs=146.8

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+|+++||||+  ++||+++++.|+++|++|++++|+....+.+.+...+.            ...++.++.+|+.|.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d~~   72 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------------EGQESLLLPCDVTSDE   72 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc------------CCCceEEEecCCCCHH
Confidence            457899999997  89999999999999999999988643222222211111            0146888999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++++++       +.+|++|||||....          +..++...+++|+.+...+++++...  ..++||++||....
T Consensus        73 ~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  152 (257)
T PRK08594         73 EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE  152 (257)
T ss_pred             HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc
Confidence            877665       458999999985421          11123445788999988887776643  23699999998653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ...+..|+.+|++.+.+.+       ..|++++.|+||+|.++....... ... .........+.+...+|
T Consensus       153 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~  226 (257)
T PRK08594        153 RV------VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEE  226 (257)
T ss_pred             cC------CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHH
Confidence            22      1234579999999987765       268999999999998763211000 000 00001112234578999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +|+++++++.+.. ...|.++.+.++
T Consensus       227 va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        227 VGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHHcCcccccccceEEEECCc
Confidence            9999999997643 345777777655

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=1.6e-17  Score=165.82  Aligned_cols=216  Identities=14%  Similarity=0.093  Sum_probs=147.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+|+||+++++.|+++|++|+++.|+. +....+.+.++..             ..++.++.+|++|.++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   71 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-------------GGEAIAVKGDVTVESD   71 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------------CCeEEEEEecCCCHHH
Confidence            4578999999999999999999999999999988854 3344443333221             2467889999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHH----HHHhcC-CCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVD----AATIAK-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~----aa~~~g-v~r~V~iSS~~v~~~  218 (530)
                      +.+++       ..+|+||||||.....      ..++...+++|+.+..++++    .+.+.+ .++||++||......
T Consensus        72 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~  151 (261)
T PRK08936         72 VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP  151 (261)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC
Confidence            77765       3589999999964321      12344568899888765544    445544 369999999754321


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc-ccccee-ecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~-~~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                            ...+..|+.+|.+.+.+.+       ..|+++++|+||+|.++..... ...... ........+.+...+|++
T Consensus       152 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  225 (261)
T PRK08936        152 ------WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIA  225 (261)
T ss_pred             ------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence                  2334579999988776654       2689999999999988753211 000000 001112234567899999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +.+++++.+.. ...|.++.+.++
T Consensus       226 ~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        226 AVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             HHHHHHcCcccCCccCcEEEECCC
Confidence            99999997643 234556666554

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.78  E-value=7.8e-18  Score=171.20  Aligned_cols=215  Identities=13%  Similarity=0.050  Sum_probs=148.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc---------hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~---------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      .+++++|||||+++||+++++.|+++|++|++++|+.         ++...+.+++...             ..++.++.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~   70 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA-------------GGEAVANG   70 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc-------------CCceEEEe
Confidence            5678999999999999999999999999999998875         4444444433321             24678899


Q ss_pred             ecCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC------CC
Q 009648          149 CDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK------VN  205 (530)
Q Consensus       149 ~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g------v~  205 (530)
                      +|+.|.+++.+++       +.+|++|||||....      +..++...+++|+.++..+++++..    .+      .+
T Consensus        71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  150 (286)
T PRK07791         71 DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA  150 (286)
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence            9999988876655       468999999996432      2233566789999999888877642    21      25


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcc
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL  278 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~  278 (530)
                      +||++||......      ......|+.+|.+.+.+.+       ..|++++.|.|| +..+...... ... .......
T Consensus       151 ~Iv~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~-~~~-~~~~~~~  221 (286)
T PRK07791        151 RIINTSSGAGLQG------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF-AEM-MAKPEEG  221 (286)
T ss_pred             EEEEeCchhhCcC------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH-HHH-HhcCccc
Confidence            8999999755321      1234679999999887765       268999999998 5433211000 000 0000000


Q ss_pred             cCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .......+|+|+++++++.+. ....|+++.+.++..
T Consensus       222 ~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        222 EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCce
Confidence            012468999999999999754 334677887777653

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.78  E-value=1e-17  Score=164.47  Aligned_cols=210  Identities=17%  Similarity=0.118  Sum_probs=146.1

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      ||||||+|+||.++++.|+++|++|++++|.. .+.+.+.+.+++.             ..++.++.+|+.|.+++..++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~~~~~~   67 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ-------------GGNARLLQFDVADRVACRTLL   67 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------------CCeEEEEEccCCCHHHHHHHH
Confidence            68999999999999999999999999998754 4444444433322             256899999999998877665


Q ss_pred             -------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH-----hcCCCEEEEEcCCCccCCCCccc
Q 009648          162 -------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       162 -------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~-----~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                             +.+|++|||+|....      +..++...+++|+.++.++++++.     +.+.++||++||...... .   
T Consensus        68 ~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~---  143 (239)
T TIGR01831        68 EADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG-N---  143 (239)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC-C---
Confidence                   357999999986422      233456678999999999988753     245579999999754322 1   


Q ss_pred             cccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                        .....|+.+|++.+.+.+       ..|++++.|+||++.++............ ......+.....+|+|+++.+++
T Consensus       144 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~  220 (239)
T TIGR01831       144 --RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA-LKTVPMNRMGQPAEVASLAGFLM  220 (239)
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH-HhcCCCCCCCCHHHHHHHHHHHc
Confidence              234569999998876654       26899999999999887532111000000 01112234567899999999999


Q ss_pred             hCC-CCCCCcEEEEeCC
Q 009648          297 KNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       297 ~~~-~~~~g~vynv~~~  312 (530)
                      .+. ....|.+..+.++
T Consensus       221 ~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       221 SDGASYVTRQVISVNGG  237 (239)
T ss_pred             CchhcCccCCEEEecCC
Confidence            864 3345555555543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.78  E-value=2.2e-17  Score=163.31  Aligned_cols=198  Identities=15%  Similarity=0.104  Sum_probs=142.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC--CH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE--KR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~--d~  154 (530)
                      ...+++||||||+|+||.++++.|+++|++|++++|+.++...+.+++.+.            ...++.++.+|+.  +.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~d~~~~~~   76 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA------------GGPQPAIIPLDLLTATP   76 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc------------CCCCceEEEecccCCCH
Confidence            456789999999999999999999999999999999988777665554432            1246778888886  44


Q ss_pred             hhHH-------HHhCCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCcc
Q 009648          155 VQIE-------PALGNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (530)
Q Consensus       155 ~sl~-------~a~~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~  216 (530)
                      +++.       +.+..+|+||||||....       ...++...+++|+.++.++++++.    +.+.++||++||....
T Consensus        77 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~  156 (247)
T PRK08945         77 QNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR  156 (247)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence            4433       333578999999985321       112345668899999888887764    5677899999997543


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..      ......|+.+|++++.+++.       .|+++++++||++.++......      .  ......+...+|++
T Consensus       157 ~~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~------~--~~~~~~~~~~~~~~  222 (247)
T PRK08945        157 QG------RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF------P--GEDPQKLKTPEDIM  222 (247)
T ss_pred             CC------CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc------C--cccccCCCCHHHHH
Confidence            21      12345699999999987753       5799999999999765321100      0  01123457899999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      +.+++++.+..
T Consensus       223 ~~~~~~~~~~~  233 (247)
T PRK08945        223 PLYLYLMGDDS  233 (247)
T ss_pred             HHHHHHhCccc
Confidence            99999986543

>PRK05855 short chain dehydrogenase; Validated

Probab=99.77  E-value=1e-17  Score=184.83  Aligned_cols=204  Identities=15%  Similarity=0.070  Sum_probs=148.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.++..         |    .++.++.+|++|.+++
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~~  379 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA---------G----AVAHAYRVDVSDADAM  379 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHHH
Confidence            45679999999999999999999999999999999988777766555432         2    4688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       .+|+||||||....      +..++...+++|+.|+.++++++.    +.+ .++||++||..+... 
T Consensus       380 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-  458 (582)
T PRK05855        380 EAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP-  458 (582)
T ss_pred             HHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC-
Confidence            77663       58999999996432      223345668899999999888754    333 369999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccccee--------ecccCcccCCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT--------LSQEDTLFGGQVS  284 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~--------~~~~~~~~~g~V~  284 (530)
                           ......|+.+|++.+.+.+       ..|+++++|+||.|-++...........        ...........+.
T Consensus       459 -----~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  533 (582)
T PRK05855        459 -----SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG  533 (582)
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCC
Confidence                 2235679999999887754       2689999999999977532211000000        0000001112357


Q ss_pred             HHHHHHHHHHHHhCCC
Q 009648          285 NLQVAELLACMAKNRS  300 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~  300 (530)
                      .+|+|+++++++.++.
T Consensus       534 p~~va~~~~~~~~~~~  549 (582)
T PRK05855        534 PEKVAKAIVDAVKRNK  549 (582)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            8999999999998765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.7e-17  Score=164.03  Aligned_cols=213  Identities=14%  Similarity=0.109  Sum_probs=144.8

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCc-----------hhHHHHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSV-----------QRAENLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~-----------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      .++++||||||+|  +||++++++|+++|++|++++|..           .+...+.+++++.             ..++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------g~~~   70 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN-------------GVKV   70 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc-------------CCeE
Confidence            4578999999995  899999999999999999876431           1122222222211             2478


Q ss_pred             EEEEecCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEE
Q 009648          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHF  207 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~  207 (530)
                      .++.+|+.|.+++.+++       ..+|+||||||....      +..++...+++|+.+...+.++    +++.+.++|
T Consensus        71 ~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i  150 (256)
T PRK12859         71 SSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRI  150 (256)
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEE
Confidence            89999999998887766       347999999985422      1223455688999988877544    444445699


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccC
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG  280 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~  280 (530)
                      |++||......      ...+..|+.+|++.+.+.+       ..|++++.|+||++.++.........+   ......+
T Consensus       151 v~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~---~~~~~~~  221 (256)
T PRK12859        151 INMTSGQFQGP------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGL---LPMFPFG  221 (256)
T ss_pred             EEEcccccCCC------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHH---HhcCCCC
Confidence            99999865321      2345679999999987754       268999999999997753211000000   0111123


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      .....+|+|+++.+++... ....|+++.+.++
T Consensus       222 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        222 RIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            3467899999999998764 2345777766654

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.77  E-value=6.7e-18  Score=168.30  Aligned_cols=209  Identities=15%  Similarity=0.104  Sum_probs=144.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHh----CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~----~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .||||||+|+||++++++|++    .|++|+++.|+.++++.+.+++...           ....++.++.+|+.|.+++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~v~~~~~Dl~~~~~v   70 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-----------RSGLRVVRVSLDLGAEAGL   70 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-----------CCCceEEEEEeccCCHHHH
Confidence            589999999999999999997    7999999999988877766655421           1124688999999999888


Q ss_pred             HHHhCC-----------CcEEEEcccCCCCc---------cCCCCcchHhHHHHHHHHHHHHHh----c-C-CCEEEEEc
Q 009648          158 EPALGN-----------ASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATI----A-K-VNHFIMVS  211 (530)
Q Consensus       158 ~~a~~~-----------vD~VI~~Ag~~~~~---------~~~~~~~~~vNv~gt~~Ll~aa~~----~-g-v~r~V~iS  211 (530)
                      +++++.           .|+||||||.....         ..++...+++|+.++..+++++..    . + .++||++|
T Consensus        71 ~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~is  150 (256)
T TIGR01500        71 EQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNIS  150 (256)
T ss_pred             HHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEEC
Confidence            776631           26999999953211         122356789999998877766543    2 2 35899999


Q ss_pred             CCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-c---cccee-ecccCccc
Q 009648          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-E---THNIT-LSQEDTLF  279 (530)
Q Consensus       212 S~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~---~~~~~-~~~~~~~~  279 (530)
                      |.+....      ...+..|+.+|.+.+.+++.       .|++++.|+||+|.++..... .   ..... ........
T Consensus       151 S~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T TIGR01500       151 SLCAIQP------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK  224 (256)
T ss_pred             CHHhCCC------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc
Confidence            9765321      23356799999999887652       689999999999987632110 0   00000 00011112


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCCCCcEE
Q 009648          280 GGQVSNLQVAELLACMAKNRSLSYCKVV  307 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~~~g~vy  307 (530)
                      +.+...+|+|+++++++++..+..|+.+
T Consensus       225 ~~~~~p~eva~~~~~l~~~~~~~~G~~~  252 (256)
T TIGR01500       225 GKLVDPKVSAQKLLSLLEKDKFKSGAHV  252 (256)
T ss_pred             CCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence            3467899999999999976554444444

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.77  E-value=1.8e-17  Score=187.43  Aligned_cols=220  Identities=14%  Similarity=0.129  Sum_probs=154.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++...+.+.+...           ....++.++.+|++|.+++
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~-----------~~~~~~~~v~~Dvtd~~~v  480 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQ-----------FGAGRAVALKMDVTDEQAV  480 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhh-----------cCCCcEEEEECCCCCHHHH
Confidence            45789999999999999999999999999999999987766655443321           0123678899999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||.....      ..++...+++|+.+...+++++    ++.+ .++||++||...... 
T Consensus       481 ~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~-  559 (676)
T TIGR02632       481 KAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYA-  559 (676)
T ss_pred             HHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCC-
Confidence            87764       789999999964321      1224456788888877766544    3443 358999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc--------cee------ecccCcc
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--------NIT------LSQEDTL  278 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~--------~~~------~~~~~~~  278 (530)
                           ......|+.+|.+.+.+++.       .|++++.|+||.|+.....+....        .+.      .......
T Consensus       560 -----~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  634 (676)
T TIGR02632       560 -----GKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL  634 (676)
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCC
Confidence                 12346799999999988763       589999999999873211110000        000      0111223


Q ss_pred             cCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .+..++.+|||+++.+++.+. ....|.++++.++..
T Consensus       635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            345689999999999998753 234588898887753

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.77  E-value=1.7e-17  Score=166.77  Aligned_cols=204  Identities=18%  Similarity=0.229  Sum_probs=144.4

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ++..+|+|+||||+.+||.+++.+|+++|.+++++.|...+++.+.+++++.         +..  .++.++++|++|.+
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~---------~~~--~~v~~~~~Dvs~~~   76 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKL---------GSL--EKVLVLQLDVSDEE   76 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHh---------CCc--CccEEEeCccCCHH
Confidence            4567899999999999999999999999999999999999988887777654         211  27999999999999


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCccC------CCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~~~------~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      ++.+++       +++|++|||||.......      +....+++|+.|+..|.+++.    +.+-+|||.+||+.+...
T Consensus        77 ~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~  156 (282)
T KOG1205|consen   77 SVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP  156 (282)
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC
Confidence            988654       689999999997643222      234579999999888777754    556679999999876332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH---H----CCCCEE-EEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI---A----SGLPYT-IVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~---~----~gl~~t-IvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|.++|++.+.+..   .    .+..+. +|.||+|-.....    ..+....+....+.....+|++.
T Consensus       157 ------~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~----~~~~~~~~~~~~~~~~~~~~~~~  226 (282)
T KOG1205|consen  157 ------LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTG----KELLGEEGKSQQGPFLRTEDVAD  226 (282)
T ss_pred             ------CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccc----hhhccccccccccchhhhhhhhh
Confidence                  1222379999999997754   2    232222 5899999764211    01111111122223345567755


Q ss_pred             --HHHHHHhCCC
Q 009648          291 --LLACMAKNRS  300 (530)
Q Consensus       291 --ai~~ll~~~~  300 (530)
                        .++.++..+.
T Consensus       227 ~~~~~~~i~~~~  238 (282)
T KOG1205|consen  227 PEAVAYAISTPP  238 (282)
T ss_pred             HHHHHHHHhcCc
Confidence              7877777664

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=2.9e-17  Score=168.71  Aligned_cols=213  Identities=14%  Similarity=0.065  Sum_probs=146.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+++++|||||+|+||++++++|+++|++|++++|+. ...+.+.+++...             ..++.++.+|+.|.+
T Consensus         9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~-------------g~~~~~~~~Dv~d~~   75 (306)
T PRK07792          9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA-------------GAKAVAVAGDISQRA   75 (306)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc-------------CCeEEEEeCCCCCHH
Confidence            45678999999999999999999999999999998854 3444444444322             257889999999988


Q ss_pred             hHHHHh------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc-----------CCCEEEEEcC
Q 009648          156 QIEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----------KVNHFIMVSS  212 (530)
Q Consensus       156 sl~~a~------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----------gv~r~V~iSS  212 (530)
                      ++.+++      +++|+||||||....      ...++...+++|+.++.++++++..+           ..++||++||
T Consensus        76 ~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS  155 (306)
T PRK07792         76 TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS  155 (306)
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECC
Confidence            877665      468999999996432      22334567899999999999886521           1258999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCH
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v  285 (530)
                      ......      ......|+.+|.+++.+++       ..|+++++|+||. ...............   .......++.
T Consensus       156 ~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~---~~~~~~~~~p  225 (306)
T PRK07792        156 EAGLVG------PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV---EAGGIDPLSP  225 (306)
T ss_pred             cccccC------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh---hhhccCCCCH
Confidence            754221      1224569999999987764       2689999999984 222110000000000   0011234689


Q ss_pred             HHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          286 LQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +|||.++++++.+.. ...|++|.+.++
T Consensus       226 e~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        226 EHVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             HHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence            999999999987543 245677777554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.76  E-value=4.9e-17  Score=163.10  Aligned_cols=214  Identities=17%  Similarity=0.127  Sum_probs=143.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH--
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI--  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl--  157 (530)
                      ++|+||||+|+||+++++.|+++|++|++++|+ .++...+.+.+...            ...++.++.+|++|.+++  
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~~~~~   69 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR------------RPNSAVTCQADLSNSATLFS   69 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc------------cCCceEEEEccCCCchhhHH
Confidence            479999999999999999999999999998764 45555444333211            114577889999998644  


Q ss_pred             --HHH-------hCCCcEEEEcccCCCC------ccC-----------CCCcchHhHHHHHHHHHHHHHhc---------
Q 009648          158 --EPA-------LGNASVVICCIGASEK------EVF-----------DITGPYRIDFQATKNLVDAATIA---------  202 (530)
Q Consensus       158 --~~a-------~~~vD~VI~~Ag~~~~------~~~-----------~~~~~~~vNv~gt~~Ll~aa~~~---------  202 (530)
                        .++       ++++|+||||||....      +..           ++...+++|+.++..+++++...         
T Consensus        70 ~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~  149 (267)
T TIGR02685        70 RCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQR  149 (267)
T ss_pred             HHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccC
Confidence              222       2568999999996421      111           13355899999999998876532         


Q ss_pred             -CCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecc
Q 009648          203 -KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQ  274 (530)
Q Consensus       203 -gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~  274 (530)
                       +..+||++||......      ...+..|+.+|++++.+++.       .|+++++|+||++..+.+....... ....
T Consensus       150 ~~~~~iv~~~s~~~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~~~~~-~~~~  222 (267)
T TIGR02685       150 STNLSIVNLCDAMTDQP------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQE-DYRR  222 (267)
T ss_pred             CCCeEEEEehhhhccCC------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccchhHHH-HHHH
Confidence             1247888888654221      23456799999999988752       6899999999999766332110000 0001


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ...........+|+++++++++.+.. ...|+.+.+.++.
T Consensus       223 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       223 KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            11111235789999999999997642 3467777777664

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.76  E-value=8e-18  Score=166.03  Aligned_cols=196  Identities=19%  Similarity=0.142  Sum_probs=136.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||++++++|+++|++|++++|+..+..  ..                ....++.++.+|+.|.+++.++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~----------------~~~~~~~~~~~D~~~~~~~~~~   63 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AA----------------AAGERLAEVELDLSDAAAAAAW   63 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hh----------------ccCCeEEEEEeccCCHHHHHHH
Confidence            58999999999999999999999999999999865311  10                0124688999999999887774


Q ss_pred             hC-----------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          161 LG-----------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       161 ~~-----------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +.           .+|+||||+|....       +..++...+++|+.++..+++.+    .+.+.++||++||......
T Consensus        64 ~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  143 (243)
T PRK07023         64 LAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA  143 (243)
T ss_pred             HHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC
Confidence            32           47999999985422       11223566889999866665554    4455679999999865322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccc---eee---cccCcccCCCCCHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHN---ITL---SQEDTLFGGQVSNL  286 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~---~~~---~~~~~~~~g~V~v~  286 (530)
                            ...+..|+.+|..+|.+++.      .|+++++|+||++.++.........   ...   .......+..+..+
T Consensus       144 ------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (243)
T PRK07023        144 ------YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPE  217 (243)
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHH
Confidence                  23456899999999988862      5899999999999765321000000   000   00011123467899


Q ss_pred             HHHHHHHHHHhCCC
Q 009648          287 QVAELLACMAKNRS  300 (530)
Q Consensus       287 DVA~ai~~ll~~~~  300 (530)
                      |+|+.++..|..+.
T Consensus       218 ~va~~~~~~l~~~~  231 (243)
T PRK07023        218 DAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHHhccc
Confidence            99998877777665

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=2.8e-17  Score=164.26  Aligned_cols=212  Identities=13%  Similarity=0.092  Sum_probs=144.3

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++++||||  +++||.++++.|+++|++|++++|+.  +..+.+.+.   .             ..++.++.+|+.|
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~---~-------------~~~~~~~~~Dv~~   68 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKR---L-------------PEPAPVLELDVTN   68 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHh---c-------------CCCCcEEeCCCCC
Confidence            45689999999  89999999999999999999998864  222322211   1             1357789999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      .+++++++       +++|++|||||....          +..++...+++|+.+...+++++...  ..++||++|+.+
T Consensus        69 ~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~  148 (256)
T PRK07889         69 EEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA  148 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc
Confidence            98877665       468999999996421          11223456899999998888876642  235899998653


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce-eecccCcccC-CCCC
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFG-GQVS  284 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~-g~V~  284 (530)
                      .  .+     ...+..|+.+|++.+.+.+       ..|++++.|.||++.++....... ... .........+ .+..
T Consensus       149 ~--~~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (256)
T PRK07889        149 T--VA-----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKD  221 (256)
T ss_pred             c--cc-----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCC
Confidence            2  11     1234568999999887765       268999999999998763211100 000 0000111122 3578


Q ss_pred             HHHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      .+|||+++++++.+.. ...++++.+.++
T Consensus       222 p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        222 PTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            9999999999998643 345777777665

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.1e-17  Score=183.08  Aligned_cols=195  Identities=15%  Similarity=0.193  Sum_probs=147.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.+++
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~~  435 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK-------------GGTAHAYTCDLTDSAAV  435 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988877766554332             24789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       ++|+||||||.....        ..++...+++|+.++.++++++    ++.+.++||++||.++...
T Consensus       436 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  515 (657)
T PRK07201        436 DHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN  515 (657)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence            87764       689999999964211        1234566899999988876665    4557789999999876332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|.++......         .......++.+++|+.
T Consensus       516 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~---------~~~~~~~~~~~~~a~~  580 (657)
T PRK07201        516 ------APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK---------RYNNVPTISPEEAADM  580 (657)
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc---------cccCCCCCCHHHHHHH
Confidence                  12345799999999987752       6899999999999876432110         0001234789999999


Q ss_pred             HHHHHhCCC
Q 009648          292 LACMAKNRS  300 (530)
Q Consensus       292 i~~ll~~~~  300 (530)
                      |+..+....
T Consensus       581 i~~~~~~~~  589 (657)
T PRK07201        581 VVRAIVEKP  589 (657)
T ss_pred             HHHHHHhCC
Confidence            999886543

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.76  E-value=4.4e-17  Score=167.89  Aligned_cols=174  Identities=16%  Similarity=0.100  Sum_probs=129.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++++|+||||+|+||+++++.|+++|++|++++|+.++.+...+++.+.           ....++.++.+|+.|.++
T Consensus        11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~-----------~~~~~v~~~~~Dl~d~~s   79 (313)
T PRK05854         11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA-----------VPDAKLSLRALDLSSLAS   79 (313)
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------CCCCceEEEEecCCCHHH
Confidence            356789999999999999999999999999999999998877766655432           112468999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC-----ccCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCC-
Q 009648          157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF-  220 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~-----~~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~-  220 (530)
                      +++++       ..+|+||||||....     +..+++..+++|+.+...|++.+..   .+.+|||++||........ 
T Consensus        80 v~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~  159 (313)
T PRK05854         80 VAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAIN  159 (313)
T ss_pred             HHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcC
Confidence            87666       358999999996432     2234566799999998877777652   2346999999975422110 


Q ss_pred             -----ccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCC
Q 009648          221 -----PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPT  261 (530)
Q Consensus       221 -----~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~  261 (530)
                           ......+...|+.+|.+.+.+.++         .|++++.+.||+|.+..
T Consensus       160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~  214 (313)
T PRK05854        160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL  214 (313)
T ss_pred             cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence                 011134566899999998766542         47999999999997653

>PRK05599 hypothetical protein; Provisional

Probab=99.76  E-value=1.4e-16  Score=158.14  Aligned_cols=200  Identities=14%  Similarity=0.110  Sum_probs=141.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+||||+++||+++++.|+ +|++|++++|+.++++.+.+++++.         +   ...+.++.+|+.|.++++++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~Dv~d~~~v~~~   67 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR---------G---ATSVHVLSFDAQDLDTHREL   67 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---------c---CCceEEEEcccCCHHHHHHH
Confidence            579999999999999999998 5999999999998887776655432         1   13578899999999887765


Q ss_pred             h-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHH----HHhcC-CCEEEEEcCCCccCCCCcc
Q 009648          161 L-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~a----a~~~g-v~r~V~iSS~~v~~~~~~~  222 (530)
                      +       +++|++|||||......      .+....+++|+.+..+++++    +.+.+ .++||++||......    
T Consensus        68 ~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~----  143 (246)
T PRK05599         68 VKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA----  143 (246)
T ss_pred             HHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC----
Confidence            5       46899999999643211      11223466788777655544    44443 469999999755322    


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|+.+|++.+.+.+       ..|++++.|.||+|.++......         ..  ...+..+|+|++++.+
T Consensus       144 --~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---------~~--~~~~~pe~~a~~~~~~  210 (246)
T PRK05599        144 --RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---------PA--PMSVYPRDVAAAVVSA  210 (246)
T ss_pred             --CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---------CC--CCCCCHHHHHHHHHHH
Confidence              1234579999999887765       26899999999999876321000         00  0125799999999999


Q ss_pred             HhCCCCCCCcEEEEeCC
Q 009648          296 AKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       296 l~~~~~~~g~vynv~~~  312 (530)
                      +.+..  .++.+.+.+.
T Consensus       211 ~~~~~--~~~~~~~~~~  225 (246)
T PRK05599        211 ITSSK--RSTTLWIPGR  225 (246)
T ss_pred             HhcCC--CCceEEeCcc
Confidence            98864  2445545443

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.75  E-value=8.2e-17  Score=166.64  Aligned_cols=193  Identities=15%  Similarity=0.119  Sum_probs=138.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--Hhh-
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQ-  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~s-  156 (530)
                      +++|+||||+|+||++++++|+++|++|++++|+.++++.+.++++..           ....++..+.+|+.+  .+. 
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~-----------~~~~~~~~~~~Dl~~~~~~~~  121 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSK-----------YSKTQIKTVVVDFSGDIDEGV  121 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH-----------CCCcEEEEEEEECCCCcHHHH
Confidence            578999999999999999999999999999999998888776655432           011357788899985  232 


Q ss_pred             --HHHHhCC--CcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          157 --IEPALGN--ASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 --l~~a~~~--vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                        +.+.+++  +|++|||||....        +..++...+++|+.++.++.+++.    +.+.++||++||..+.....
T Consensus       122 ~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~  201 (320)
T PLN02780        122 KRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS  201 (320)
T ss_pred             HHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC
Confidence              3344454  5699999996421        112234578999999988887754    45667999999976532110


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+.+.       .|+++++|+||+|.++.....         .....  ..+.+++|+.++
T Consensus       202 ----~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~---------~~~~~--~~~p~~~A~~~~  266 (320)
T PLN02780        202 ----DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR---------RSSFL--VPSSDGYARAAL  266 (320)
T ss_pred             ----CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc---------CCCCC--CCCHHHHHHHHH
Confidence                12246799999998877652       689999999999987632110         01111  357999999999


Q ss_pred             HHHhC
Q 009648          294 CMAKN  298 (530)
Q Consensus       294 ~ll~~  298 (530)
                      ..+..
T Consensus       267 ~~~~~  271 (320)
T PLN02780        267 RWVGY  271 (320)
T ss_pred             HHhCC
Confidence            99854

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.75  E-value=5e-18  Score=185.03  Aligned_cols=100  Identities=48%  Similarity=0.767  Sum_probs=69.7

Q ss_pred             CccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCcccCCCCCccccCCCCC
Q 009648          363 EPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPL  442 (530)
Q Consensus       363 ~~~~~~~~~~rPlsp~~~~~~~kpp~sp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl  442 (530)
                      +..+......||||||+.|+||||||||+|+++++...+.. .....+.+.++++    .+..+.+   +.....+.|||
T Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~a~~d~---~~~~~~~~~pl  497 (576)
T PLN03209        426 EPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVS-STSSVPAVPDTAP----ATAATDA---AAPPPANMRPL  497 (576)
T ss_pred             cccccccCCCCCCCcccccccCCCCCCCCCCCCCCcccccc-cccccCCCCCCCC----ccccccc---ccCCCCCCCCC
Confidence            44455666999999999999999999999999876653221 1111122222222    2222323   22345789999


Q ss_pred             CcCccCCCCCCCCCCCCCCCCCCccCCC
Q 009648          443 SPYFAYEDLKPPSSPSPTPSGPKEVLSS  470 (530)
Q Consensus       443 spy~~y~~lk~~~~~~~~~~~~~~~~~~  470 (530)
                      |||++|+||||||||||+++++++..+.
T Consensus       498 spy~~y~d~kpp~sp~p~~~~~~~~~~~  525 (576)
T PLN03209        498 SPYAVYDDLKPPTSPSPAAPVGKVAPSS  525 (576)
T ss_pred             CcchhhcccCCCCCCCccccCCccCccc
Confidence            9999999999999999999999876443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-16  Score=154.42  Aligned_cols=193  Identities=13%  Similarity=0.071  Sum_probs=141.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++++||||+|+||+++++.|+++|++|++++|+.++.+.+..                   .+++++.+|+.|.+.++++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~v~~~   62 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-------------------LGAEALALDVADPASVAGL   62 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------------------ccceEEEecCCCHHHHHHH
Confidence            589999999999999999999999999999999776554321                   2457889999999888775


Q ss_pred             h---C--CCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCcccc
Q 009648          161 L---G--NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       161 ~---~--~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +   .  .+|+||||+|....        ...++...+++|+.++.++++++...   +.++||++||.........   
T Consensus        63 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  139 (222)
T PRK06953         63 AWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---  139 (222)
T ss_pred             HHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---
Confidence            4   2  48999999996521        22234667999999999999988742   3358999998654221111   


Q ss_pred             ccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                      ....+.|+.+|...+.+++.     .+++++.|+||++..+...               ..+.+..+|.+..++.++...
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~~~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        140 GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------AQAALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------CCCCCCHHHHHHHHHHHHHhc
Confidence            11224699999999988774     4789999999999876321               123478899999999987654


Q ss_pred             CC-CCCcEEEEe
Q 009648          300 SL-SYCKVVEVI  310 (530)
Q Consensus       300 ~~-~~g~vynv~  310 (530)
                      .. ..+..|...
T Consensus       205 ~~~~~~~~~~~~  216 (222)
T PRK06953        205 TRRDNGRFFQYD  216 (222)
T ss_pred             CcccCceEEeeC
Confidence            32 234444443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.6e-16  Score=163.41  Aligned_cols=207  Identities=17%  Similarity=0.081  Sum_probs=138.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc----------hhHHHHHHHHHHhhhhccccccCCCCCCCeEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~----------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v  147 (530)
                      +.+|+||||||+++||+++++.|+++|++|++++|+.          ++.+.+.+.+...             ..++.++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~   72 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-------------GGRGIAV   72 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-------------CCceEEE
Confidence            4578999999999999999999999999999999984          2334433333221             1457889


Q ss_pred             EecCCCHhhHHHHh-------CCCcEEEEcc-cCCC-----Cc-----cCCCCcchHhHHHHHHHHHHHHHh----cCCC
Q 009648          148 ECDLEKRVQIEPAL-------GNASVVICCI-GASE-----KE-----VFDITGPYRIDFQATKNLVDAATI----AKVN  205 (530)
Q Consensus       148 ~~Dl~d~~sl~~a~-------~~vD~VI~~A-g~~~-----~~-----~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~  205 (530)
                      .+|+.|.+++++++       +++|++|||| |...     ..     ..++...+++|+.+...+++++..    .+.+
T Consensus        73 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g  152 (305)
T PRK08303         73 QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG  152 (305)
T ss_pred             EcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc
Confidence            99999998877665       4689999999 7321     11     112345578899888877766653    3446


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc-c-cc-ce-eecc
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E-TH-NI-TLSQ  274 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~-~-~~-~~-~~~~  274 (530)
                      +||++||.........   ......|+.+|.+...+.+       ..|++++.|.||+|.++..... . .. .. ....
T Consensus       153 ~IV~isS~~~~~~~~~---~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  229 (305)
T PRK08303        153 LVVEITDGTAEYNATH---YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA  229 (305)
T ss_pred             EEEEECCccccccCcC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc
Confidence            9999999643211000   1123469999999887765       2689999999999977631100 0 00 00 0000


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      .....+.....+|+|+++++++.+..
T Consensus       230 ~~p~~~~~~~peevA~~v~fL~s~~~  255 (305)
T PRK08303        230 KEPHFAISETPRYVGRAVAALAADPD  255 (305)
T ss_pred             cccccccCCCHHHHHHHHHHHHcCcc
Confidence            01111223478999999999998763

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.3e-16  Score=158.99  Aligned_cols=184  Identities=15%  Similarity=0.053  Sum_probs=130.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...++++++||||+|+||++++++|+++|++|++++|+........     .         .    ....++.+|+.|.+
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-----~---------~----~~~~~~~~D~~~~~   71 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-----D---------E----SPNEWIKWECGKEE   71 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-----c---------c----CCCeEEEeeCCCHH
Confidence            3456789999999999999999999999999999999863211100     0         0    12257889999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHHHHhc-------CCCEEEEEcCCCccCCCCccccc
Q 009648          156 QIEPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~aa~~~-------gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                      ++.+.++++|++|||||....   +..++...+++|+.++.++++++...       +.+.++..||.+....       
T Consensus        72 ~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-------  144 (245)
T PRK12367         72 SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-------  144 (245)
T ss_pred             HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-------
Confidence            999999999999999996422   22345677999999999999886542       1223444444432111       


Q ss_pred             cchhHHHHHHHHHHHHH---H-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEAL---I-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l---~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                      .....|+.+|++.+.+.   +       ..++.++.+.||.+.++..             .   ...++.+|+|+.++.+
T Consensus       145 ~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-------------~---~~~~~~~~vA~~i~~~  208 (245)
T PRK12367        145 ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-------------P---IGIMSADFVAKQILDQ  208 (245)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-------------c---cCCCCHHHHHHHHHHH
Confidence            12346999999975322   1       2688888999988754321             0   1247899999999999


Q ss_pred             HhCCC
Q 009648          296 AKNRS  300 (530)
Q Consensus       296 l~~~~  300 (530)
                      +.++.
T Consensus       209 ~~~~~  213 (245)
T PRK12367        209 ANLGL  213 (245)
T ss_pred             HhcCC
Confidence            98765

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=4.4e-17  Score=155.60  Aligned_cols=224  Identities=16%  Similarity=0.127  Sum_probs=166.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|||||++|.+|++|++-+..+|+  +-.++.-+                                 ..+||++.++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------------------kd~DLt~~a~t   47 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------------------KDADLTNLADT   47 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------------------ccccccchHHH
Confidence            36899999999999999999998875  22222211                                 12899999999


Q ss_pred             HHHhCC--CcEEEEcccCCC---CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc----c------
Q 009648          158 EPALGN--ASVVICCIGASE---KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP----A------  222 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~---~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~----~------  222 (530)
                      +.+|..  -.+|||+|+...   .+..-....++.|+...-|++..|-++|++++|++-|..++..-.+    +      
T Consensus        48 ~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~g  127 (315)
T KOG1431|consen   48 RALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNG  127 (315)
T ss_pred             HHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccC
Confidence            999964  589999997432   2334446678999999999999999999999999888766432211    1      


Q ss_pred             ccccchhHHHHHHHHHHHH----HHHCCCCEEEEEcCcccCCCccccc--------------------ccceeecccCcc
Q 009648          223 AILNLFWGVLLWKRKAEEA----LIASGLPYTIVRPGGMERPTDAYKE--------------------THNITLSQEDTL  278 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~----l~~~gl~~tIvRPg~V~Gp~~~~~~--------------------~~~~~~~~~~~~  278 (530)
                      .+.....+|+..|+.+.-.    -.++|..++.+-|.++|||.+++..                    +..+.+.+.+..
T Consensus       128 pphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~P  207 (315)
T KOG1431|consen  128 PPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSP  207 (315)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCCh
Confidence            1122334688888776533    3358999999999999999998732                    112334444444


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCC--CCChhHHHHHHHhcCCCCCCCCccC
Q 009648          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRAEPKESI  338 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~--~~t~~~i~ell~~v~g~~~~~~~~~  338 (530)
                      ...+|+.+|+|++++++|.+-.  .-+.++++.++  .+++.+.++++.++++-.|+-.+..
T Consensus       208 lRqFiys~DLA~l~i~vlr~Y~--~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~Dt  267 (315)
T KOG1431|consen  208 LRQFIYSDDLADLFIWVLREYE--GVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDT  267 (315)
T ss_pred             HHHHhhHhHHHHHHHHHHHhhc--CccceEeccCccceeEHHHHHHHHHHHhCCCceEEeec
Confidence            5568999999999999998754  45677777776  7899999999999999888755444

>PRK06484 short chain dehydrogenase; Validated

Probab=99.74  E-value=1.1e-16  Score=175.54  Aligned_cols=199  Identities=17%  Similarity=0.158  Sum_probs=143.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .++++|||||+++||+++++.|+++|++|++++|+.++...+.+++                ..++.++.+|+.|.++++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~   67 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----------------GPDHHALAMDVSDEAQIR   67 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceeEEEeccCCHHHHH
Confidence            4689999999999999999999999999999999987766554321                145788999999998877


Q ss_pred             HHh-------CCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHHHhc----CCC-EEEEEcCCCccCC
Q 009648          159 PAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAATIA----KVN-HFIMVSSLGTNKF  218 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~-r~V~iSS~~v~~~  218 (530)
                      +++       +++|+||||||...        .+..++...+++|+.++..+++++...    +.+ +||++||......
T Consensus        68 ~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~  147 (520)
T PRK06484         68 EGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA  147 (520)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC
Confidence            766       45899999998631        122335667999999999988887643    333 9999999765332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc-eee--cccCcccCCCCCHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITL--SQEDTLFGGQVSNLQV  288 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~--~~~~~~~~g~V~v~DV  288 (530)
                      .      .....|+.+|++.+.+++       ..|++++.|+||.|.++......... ...  .......+.....+|+
T Consensus       148 ~------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  221 (520)
T PRK06484        148 L------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEI  221 (520)
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHH
Confidence            1      234579999999987765       26899999999999776432111000 000  0001112234688999


Q ss_pred             HHHHHHHHhCC
Q 009648          289 AELLACMAKNR  299 (530)
Q Consensus       289 A~ai~~ll~~~  299 (530)
                      |+++++++.+.
T Consensus       222 a~~v~~l~~~~  232 (520)
T PRK06484        222 AEAVFFLASDQ  232 (520)
T ss_pred             HHHHHHHhCcc
Confidence            99999988753

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.1e-16  Score=153.54  Aligned_cols=181  Identities=19%  Similarity=0.139  Sum_probs=135.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++ ++|++++|+..                              .+.+|+.|.++++++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------------~~~~D~~~~~~~~~~   49 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------------DVQVDITDPASIRAL   49 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------------ceEecCCChHHHHHH
Confidence            47999999999999999999999 99999998742                              256999999988887


Q ss_pred             hC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccccchh
Q 009648          161 LG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFW  229 (530)
Q Consensus       161 ~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~  229 (530)
                      ++   ++|+||||||....      ...++...+++|+.++.++++++...  +.++||++||......      .....
T Consensus        50 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~------~~~~~  123 (199)
T PRK07578         50 FEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP------IPGGA  123 (199)
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC------CCCch
Confidence            75   68999999995422      22234556889999999999987753  3468999998765322      22345


Q ss_pred             HHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCC
Q 009648          230 GVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~  303 (530)
                      .|+.+|+..+.+++.      .|++++.|+||++.++......    ..     .....++.+|+|+++..+++..  ..
T Consensus       124 ~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~----~~-----~~~~~~~~~~~a~~~~~~~~~~--~~  192 (199)
T PRK07578        124 SAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYGP----FF-----PGFEPVPAARVALAYVRSVEGA--QT  192 (199)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhhh----cC-----CCCCCCCHHHHHHHHHHHhccc--ee
Confidence            799999998877652      5899999999999765321100    00     1124589999999999999764  35


Q ss_pred             CcEEEE
Q 009648          304 CKVVEV  309 (530)
Q Consensus       304 g~vynv  309 (530)
                      |++|++
T Consensus       193 g~~~~~  198 (199)
T PRK07578        193 GEVYKV  198 (199)
T ss_pred             eEEecc
Confidence            777765

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.73  E-value=1.1e-16  Score=165.06  Aligned_cols=216  Identities=14%  Similarity=0.106  Sum_probs=143.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||+++||+++++.|+++| ++|++++|+.++...+.+.+..             ...++.++.+|+.|.++++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v~   69 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-------------PKDSYTIMHLDLGSLDSVR   69 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEcCCCCHHHHH
Confidence            6799999999999999999999999 9999999998776665443321             1246888999999998877


Q ss_pred             HHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcC--CCEEEEEcCCCccCC
Q 009648          159 PAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNKF  218 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g--v~r~V~iSS~~v~~~  218 (530)
                      +++       +++|++|||||....       +..++...+++|+.++..+++++.    +.+  .+|||++||......
T Consensus        70 ~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~  149 (314)
T TIGR01289        70 QFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTN  149 (314)
T ss_pred             HHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccc
Confidence            665       468999999996321       112345568999999887766654    332  469999999865321


Q ss_pred             C------C----c-----------------cccccchhHHHHHHHHHHHHHH----H----CCCCEEEEEcCccc-CCCc
Q 009648          219 G------F----P-----------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPTD  262 (530)
Q Consensus       219 ~------~----~-----------------~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tIvRPg~V~-Gp~~  262 (530)
                      .      .    .                 .....++..|+.+|.+...+.+    +    .|++++.|+||+|. ++..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~  229 (314)
T TIGR01289       150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF  229 (314)
T ss_pred             cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence            0      0    0                 0112356679999999554432    2    47999999999995 3322


Q ss_pred             cc-ccccceeec-ccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEE
Q 009648          263 AY-KETHNITLS-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (530)
Q Consensus       263 ~~-~~~~~~~~~-~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vyn  308 (530)
                      .. ......... .......+..+.++.|+.++.++.+.....++.|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       230 REHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             ccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceee
Confidence            11 000000000 00111234678999999999988775433344443

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.72  E-value=4.2e-16  Score=145.07  Aligned_cols=198  Identities=22%  Similarity=0.229  Sum_probs=149.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|+||+|.+|++|+++++++||+|++++|++.|...+                     +++.+++.|+.|.+++.+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------------------~~~~i~q~Difd~~~~a~~   59 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------------------QGVTILQKDIFDLTSLASD   59 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------------------ccceeecccccChhhhHhh
Confidence            5899999999999999999999999999999999876542                     5788999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc----cccccchhHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP----AAILNLFWGVLLWKR  236 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~----~~~~~~~~~Y~~sK~  236 (530)
                      +.++|+||...|....+.      ..........|++..+..++.|++.+...+.-.....    +.+..|.--|...+.
T Consensus        60 l~g~DaVIsA~~~~~~~~------~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~  133 (211)
T COG2910          60 LAGHDAVISAFGAGASDN------DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALA  133 (211)
T ss_pred             hcCCceEEEeccCCCCCh------hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHH
Confidence            999999999988653221      1223555788899999999999999998765222211    111222223556666


Q ss_pred             HHH--HHHHH-CCCCEEEEEcCcccCCCcccccccceeecccCcccC----CCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          237 KAE--EALIA-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG----GQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       237 ~~E--~~l~~-~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~----g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      .+|  +.|+. ..+.||.|-|..++-|+.   .+..+.++++..+.+    .+|+..|.|-+++..++++. ..++-|.+
T Consensus       134 ~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe---rTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~-h~rqRftv  209 (211)
T COG2910         134 QAEFLDSLRAEKSLDWTFVSPAAFFEPGE---RTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ-HIRQRFTV  209 (211)
T ss_pred             HHHHHHHHhhccCcceEEeCcHHhcCCcc---ccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc-ccceeeee
Confidence            666  45554 569999999999999964   345566655443332    47999999999999999987 45555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=3.6e-16  Score=168.77  Aligned_cols=214  Identities=16%  Similarity=0.076  Sum_probs=145.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||+.+++.|+++|++|++++|.... +.+.+...+               -+..++.+|+.|.+++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~---------------~~~~~~~~Dv~~~~~~  271 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANR---------------VGGTALALDITAPDAP  271 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEeCCCHHHH
Confidence            457899999999999999999999999999999985322 122111111               1235788999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcC----CCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK----VNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~g----v~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.+|++++....    .++||++||......  
T Consensus       272 ~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g--  349 (450)
T PRK08261        272 ARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG--  349 (450)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC--
Confidence            76653       68999999996532      223345678899999999999987642    369999999755321  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|...+.+++       ..|+++++|+||.+..+.........................+|||++++
T Consensus       350 ----~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~  425 (450)
T PRK08261        350 ----NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIA  425 (450)
T ss_pred             ----CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHH
Confidence                1234579999998776654       36899999999998654221100000000000011122345789999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.... ...|+++.+.++.
T Consensus       426 ~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        426 WLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             HHhChhhcCCCCCEEEECCCc
Confidence            9987542 2457888887653

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.71  E-value=9.2e-16  Score=155.06  Aligned_cols=222  Identities=19%  Similarity=0.147  Sum_probs=159.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|++|||||+.+||+++|+.|++.|++|++.+|+.++.....+.+....          ....++..+.+|+.+.+.
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~   74 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLG----------YTGGKVLAIVCDVSKEVD   74 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC----------CCCCeeEEEECcCCCHHH
Confidence            5678999999999999999999999999999999999998877766554431          113678999999998766


Q ss_pred             HHHHh--------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHH-HHHHHHHHH----hcCCCEEEEEcCCCcc
Q 009648          157 IEPAL--------GNASVVICCIGASEK-------EVFDITGPYRIDFQA-TKNLVDAAT----IAKVNHFIMVSSLGTN  216 (530)
Q Consensus       157 l~~a~--------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~g-t~~Ll~aa~----~~gv~r~V~iSS~~v~  216 (530)
                      +++++        +.+|++|||||....       +..++...+++|+.| ...+..+|.    +.+.+.|+++||.+..
T Consensus        75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~  154 (270)
T KOG0725|consen   75 VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV  154 (270)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence            55444        568999999995432       334467779999995 555555554    3356789999998664


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc----ceee---cccCcccCCC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH----NITL---SQEDTLFGGQ  282 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~----~~~~---~~~~~~~~g~  282 (530)
                      ....     .....|+.+|.+.+++.|.       .|+|++.|-||.|.++........    .+..   .......+..
T Consensus       155 ~~~~-----~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~  229 (270)
T KOG0725|consen  155 GPGP-----GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRV  229 (270)
T ss_pred             cCCC-----CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCc
Confidence            3321     1114699999999999873       799999999999988751111000    0100   1122234556


Q ss_pred             CCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ...+|||.++.+++.+.. +..|+++-+.++.
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            788999999999998753 3456777666654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.9e-16  Score=151.21  Aligned_cols=190  Identities=15%  Similarity=0.072  Sum_probs=135.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|+||||+|+||+++++.|+++|++|++++|+..+...+.+                  ..++.++.+|+.|.+++.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------------------~~~~~~~~~D~~d~~~~~~~   63 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA------------------LPGVHIEKLDMNDPASLDQL   63 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh------------------ccccceEEcCCCCHHHHHHH
Confidence            689999999999999999999999999999999876544321                  13577888999999888776


Q ss_pred             hC-----CCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCcccc
Q 009648          161 LG-----NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       161 ~~-----~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      ++     ++|+||||||....        ...++...+.+|+.++.++++++...   +.+++|++||...... .  ..
T Consensus        64 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~-~--~~  140 (225)
T PRK08177         64 LQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVE-L--PD  140 (225)
T ss_pred             HHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccc-c--CC
Confidence            64     58999999986422        11224456788999999988887643   3358899988533211 1  11


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      ...+..|+.+|++.+.+++.       .+++++.|+||++.++....               ...++....+.-++..++
T Consensus       141 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~---------------~~~~~~~~~~~~~~~~~~  205 (225)
T PRK08177        141 GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD---------------NAPLDVETSVKGLVEQIE  205 (225)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC---------------CCCCCHHHHHHHHHHHHH
Confidence            22345699999999988762       57999999999997764210               112556667777777776


Q ss_pred             CCCCCCCcE
Q 009648          298 NRSLSYCKV  306 (530)
Q Consensus       298 ~~~~~~g~v  306 (530)
                      +.....++.
T Consensus       206 ~~~~~~~~~  214 (225)
T PRK08177        206 AASGKGGHR  214 (225)
T ss_pred             hCCccCCCc
Confidence            654323444

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.70  E-value=8.7e-16  Score=150.57  Aligned_cols=200  Identities=15%  Similarity=0.104  Sum_probs=138.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|+||||+|+||++++++|+++|  +.|.+..|+....                     ....++.++++|+.|.++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------------------~~~~~~~~~~~Dls~~~~~~   59 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------------------FQHDNVQWHALDVTDEAEIK   59 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------------------cccCceEEEEecCCCHHHHH
Confidence            579999999999999999999985  5666666654321                     01257889999999988766


Q ss_pred             HH---hCCCcEEEEcccCCCCcc------------CCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          159 PA---LGNASVVICCIGASEKEV------------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       159 ~a---~~~vD~VI~~Ag~~~~~~------------~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      ++   ++++|+||||||......            .++...+++|+.+...+++++..    .+.++++++||.......
T Consensus        60 ~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~  139 (235)
T PRK09009         60 QLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD  139 (235)
T ss_pred             HHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc
Confidence            54   468999999999653211            11234688999888877777653    345689999875331111


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .   ....+..|+.+|+.++.+++.         .+++++.|.||++.++......        .....+.+++.+|+|+
T Consensus       140 ~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~a~  208 (235)
T PRK09009        140 N---RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ--------QNVPKGKLFTPEYVAQ  208 (235)
T ss_pred             C---CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh--------hccccCCCCCHHHHHH
Confidence            1   123456799999999987652         3789999999999876432110        1112234678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      +++.++.... ...|..+.+.++
T Consensus       209 ~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        209 CLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHHcCChhhCCcEEeeCCc
Confidence            9999998763 224566655444

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.69  E-value=9.6e-16  Score=157.42  Aligned_cols=229  Identities=11%  Similarity=0.072  Sum_probs=147.1

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC--CC
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EK  153 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d  153 (530)
                      +++|++|||||  +.+||+++++.|+++|++|++ .|+.++++.+...+...+++......+........++.+|+  .+
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            67899999999  799999999999999999998 78877777665544321111000000000011245678888  32


Q ss_pred             Hh------------------hHHHHh-------CCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHHH
Q 009648          154 RV------------------QIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAAT  200 (530)
Q Consensus       154 ~~------------------sl~~a~-------~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa~  200 (530)
                      .+                  ++++++       +.+|++|||||...        .+..++...+++|+.+...+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  444433       56899999997421        1233467779999999998888866


Q ss_pred             hc--CCCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHH-------H-CCCCEEEEEcCcccCCCcccccc-c
Q 009648          201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-H  268 (530)
Q Consensus       201 ~~--gv~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl~~tIvRPg~V~Gp~~~~~~~-~  268 (530)
                      ..  .-++||++||......      ...+ ..|+.+|++.+.+.+       . .|++++.|.||+|.++....... .
T Consensus       166 p~m~~~G~II~isS~a~~~~------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~  239 (303)
T PLN02730        166 PIMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFID  239 (303)
T ss_pred             HHHhcCCEEEEEechhhcCC------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccH
Confidence            43  2269999999765322      1112 369999999987765       2 48999999999998764321000 0


Q ss_pred             ce-eecccCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          269 NI-TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       269 ~~-~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .. ...........+...+|+|.++++++.+.. ...++++.+.++.
T Consensus       240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~  286 (303)
T PLN02730        240 DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGL  286 (303)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCc
Confidence            00 000011112345689999999999997543 3457777766653

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.2e-15  Score=150.31  Aligned_cols=186  Identities=8%  Similarity=-0.035  Sum_probs=134.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++++||||+++||+++++.|+++|++|+++.|+.++++.+.+++++.             ..++..+.+|+.|.+++
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-------------~~~~~~~~~D~~~~~~~   69 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-------------TDNVYSFQLKDFSQESI   69 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCCeEEEEccCCCHHHH
Confidence            45689999999999999999999999999999999998887776655432             14577888999999888


Q ss_pred             HHHh-------C-CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHH----HHhcC-CCEEEEEcCCCccC
Q 009648          158 EPAL-------G-NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~-------~-~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~a----a~~~g-v~r~V~iSS~~v~~  217 (530)
                      ++++       + ++|++|||||....       ...++...+++|+.+...++++    +.+.+ .++||++||.... 
T Consensus        70 ~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-  148 (227)
T PRK08862         70 RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-  148 (227)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-
Confidence            7665       4 68999999974321       1112344567787777666554    43433 4699999996532 


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCC-HHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS-NLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~-v~DVA  289 (530)
                              ..+..|+.+|++.+.+.+       ..|++++.|.||++.+......  .            .|-. .+|++
T Consensus       149 --------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~--~------------~~~~~~~~~~  206 (227)
T PRK08862        149 --------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDA--V------------HWAEIQDELI  206 (227)
T ss_pred             --------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCH--H------------HHHHHHHHHH
Confidence                    124579999999887765       2689999999999987622100  0            0111 27899


Q ss_pred             HHHHHHHhCC
Q 009648          290 ELLACMAKNR  299 (530)
Q Consensus       290 ~ai~~ll~~~  299 (530)
                      .+..+++.+.
T Consensus       207 ~~~~~l~~~~  216 (227)
T PRK08862        207 RNTEYIVANE  216 (227)
T ss_pred             hheeEEEecc
Confidence            9998888755

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.69  E-value=1.1e-16  Score=158.17  Aligned_cols=206  Identities=19%  Similarity=0.221  Sum_probs=147.4

Q ss_pred             CCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh---
Q 009648           87 GAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL---  161 (530)
Q Consensus        87 GAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~---  161 (530)
                      |++  ++||+++++.|+++|++|++++|+.++.....+++.+.              ...+++.+|+.|.++++.++   
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~~~~~~   66 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE--------------YGAEVIQCDLSDEESVEALFDEA   66 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH--------------TTSEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--------------cCCceEeecCcchHHHHHHHHHH
Confidence            666  99999999999999999999999998765544444332              12346999999998877664   


Q ss_pred             -----CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcccc
Q 009648          162 -----GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       162 -----~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                           +++|++|||+|....          +..++...+++|+.+...+++++.+.  ..+++|++||.+....      
T Consensus        67 ~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~------  140 (241)
T PF13561_consen   67 VERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP------  140 (241)
T ss_dssp             HHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB------
T ss_pred             HhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc------
Confidence                 568999999986543          11234566889999988888887543  2258999999866433      


Q ss_pred             ccchhHHHHHHHHHHHHHH-------H-CCCCEEEEEcCcccCCCccccc-cc-ceeecccCcccCCCCCHHHHHHHHHH
Q 009648          225 LNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE-TH-NITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~-~gl~~tIvRPg~V~Gp~~~~~~-~~-~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                      ......|+.+|++.+.+++       . .||+++.|+||+|.++...... .. ...........+.....+|||+++++
T Consensus       141 ~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~f  220 (241)
T PF13561_consen  141 MPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLF  220 (241)
T ss_dssp             STTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHH
Confidence            2334579999999998876       3 6999999999999876321110 00 11111122333445789999999999


Q ss_pred             HHhCC-CCCCCcEEEEeCC
Q 009648          295 MAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       295 ll~~~-~~~~g~vynv~~~  312 (530)
                      |+.+. .+..|+++.|.++
T Consensus       221 L~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  221 LASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHSGGGTTGTSEEEEESTT
T ss_pred             HhCccccCccCCeEEECCC
Confidence            99876 2356888887766

...

>PLN00015 protochlorophyllide reductase

Probab=99.68  E-value=9.4e-16  Score=157.56  Aligned_cols=204  Identities=16%  Similarity=0.166  Sum_probs=136.0

Q ss_pred             EEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh-
Q 009648           84 FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL-  161 (530)
Q Consensus        84 LVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~-  161 (530)
                      |||||+++||.+++++|+++| ++|++++|+.++...+...+..             ...++.++.+|+.|.+++++++ 
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~d~~~v~~~~~   67 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-------------PKDSYTVMHLDLASLDSVRQFVD   67 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEecCCCHHHHHHHHH
Confidence            599999999999999999999 9999999998776655443211             1246888999999998877665 


Q ss_pred             ------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcC--CCEEEEEcCCCccCC---C
Q 009648          162 ------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNKF---G  219 (530)
Q Consensus       162 ------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g--v~r~V~iSS~~v~~~---~  219 (530)
                            +++|+||||||....       +..++...+++|+.++.++++++.    +.+  .++||++||......   +
T Consensus        68 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~  147 (308)
T PLN00015         68 NFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAG  147 (308)
T ss_pred             HHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccc
Confidence                  358999999996421       112345678999999777766544    444  469999999754211   0


Q ss_pred             --Cc-------c-----------------ccccchhHHHHHHHHHHHHHH----H----CCCCEEEEEcCccc-CCCccc
Q 009648          220 --FP-------A-----------------AILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPTDAY  264 (530)
Q Consensus       220 --~~-------~-----------------~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tIvRPg~V~-Gp~~~~  264 (530)
                        .+       .                 .....+..|+.+|.+.+.+.+    +    .|++++.|+||+|. .+....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        148 NVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             cCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence              00       0                 012346679999998544322    2    47999999999995 332211


Q ss_pred             cc-ccceeec-ccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          265 KE-THNITLS-QEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       265 ~~-~~~~~~~-~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      .. ....... ......++..+.++.|+.+++++.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~  265 (308)
T PLN00015        228 HIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPS  265 (308)
T ss_pred             ccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccc
Confidence            00 0000000 001112345789999999999887654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.67  E-value=3.8e-15  Score=158.39  Aligned_cols=183  Identities=15%  Similarity=0.106  Sum_probs=130.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.++.....   ..             ....+..+.+|+.|.+++
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~-------------~~~~v~~v~~Dvsd~~~v  239 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NG-------------EDLPVKTLHWQVGQEAAL  239 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hh-------------cCCCeEEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999876543221   10             013467889999999999


Q ss_pred             HHHhCCCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHHHHh----cC----CCEEEEEcCCCccCCCCcccccc
Q 009648          158 EPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATI----AK----VNHFIMVSSLGTNKFGFPAAILN  226 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~aa~~----~g----v~r~V~iSS~~v~~~~~~~~~~~  226 (530)
                      .+.++++|++|||||....   +..++...+++|+.++.++++++..    .+    ...+|++|+.+.   .     ..
T Consensus       240 ~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~---~-----~~  311 (406)
T PRK07424        240 AELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV---N-----PA  311 (406)
T ss_pred             HHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc---c-----CC
Confidence            9999999999999996432   2223456799999999999988753    22    123555554321   1     11


Q ss_pred             chhHHHHHHHHHHHHHH--H--CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          227 LFWGVLLWKRKAEEALI--A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~--~--~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ....|+.+|++.+.+..  .  .++.+..+.+|.+..+..                ..+.++.+|+|+.|+.+++++.
T Consensus       312 ~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~----------------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        312 FSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN----------------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC----------------cCCCCCHHHHHHHHHHHHHCCC
Confidence            12469999999887532  2  455666666665432210                0124789999999999998876

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.67  E-value=9.4e-16  Score=143.71  Aligned_cols=214  Identities=21%  Similarity=0.187  Sum_probs=147.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.+.++||||+.+||++++..|++.|++|.+.+++...+++....+.           |   ..+...+.||+.+..++
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~-----------g---~~~h~aF~~DVS~a~~v   77 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLG-----------G---YGDHSAFSCDVSKAHDV   77 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcC-----------C---CCccceeeeccCcHHHH
Confidence            456789999999999999999999999999999998876655443221           1   24566788999998776


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C--CCEEEEEcCCCccCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K--VNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g--v~r~V~iSS~~v~~~  218 (530)
                      +..+       +..++||||||++..      ...+|...+.+|+.|+..+.+++.+.    +  ..+||++||+-... 
T Consensus        78 ~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGki-  156 (256)
T KOG1200|consen   78 QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKI-  156 (256)
T ss_pred             HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccc-
Confidence            6544       457999999997643      44567888999999988887776543    2  23999999973311 


Q ss_pred             CCccccccchhHHHHHHH--------HHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKR--------KAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~--------~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      |+     .....|+++|.        ++.++. ..+||+++|.||.|-.|.........+.-..+....+..-..+|||.
T Consensus       157 GN-----~GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~  230 (256)
T KOG1200|consen  157 GN-----FGQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVAN  230 (256)
T ss_pred             cc-----ccchhhhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHH
Confidence            11     11234666654        343333 47999999999999887432211111111112223334567899999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++++.+.. +..|.++.+.++
T Consensus       231 ~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  231 LVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             HHHHHhccccccccceeEEEecc
Confidence            9999996553 235788888876

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.67  E-value=4e-15  Score=148.83  Aligned_cols=196  Identities=14%  Similarity=0.098  Sum_probs=144.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..++.||||||+++|||.++.+|+++|.++.+.+.+.+...+..+.+++.              +++....||++|.+.
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--------------g~~~~y~cdis~~ee  100 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--------------GEAKAYTCDISDREE  100 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--------------CceeEEEecCCCHHH
Confidence            456789999999999999999999999999999999998777766655543              478999999999877


Q ss_pred             HHHHh-------CCCcEEEEcccCCC------CccCCCCcchHhHHHHHHH----HHHHHHhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKN----LVDAATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~----Ll~aa~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.+..       +.+|++|||||...      ....+.+..+++|+.+...    ++..+.+.+-+|||-++|+.+... 
T Consensus       101 i~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g-  179 (300)
T KOG1201|consen  101 IYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG-  179 (300)
T ss_pred             HHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC-
Confidence            65443       67999999999642      2233346679999988554    555567777789999999855221 


Q ss_pred             CccccccchhHHHHHHHHHHHHH-------HH---CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEAL-------IA---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l-------~~---~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|..||.++..+.       ++   .|++.+.|.|+.+-...        +............+..+.||
T Consensus       180 -----~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm--------f~~~~~~~~l~P~L~p~~va  246 (300)
T KOG1201|consen  180 -----PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM--------FDGATPFPTLAPLLEPEYVA  246 (300)
T ss_pred             -----CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc--------cCCCCCCccccCCCCHHHHH
Confidence                 233456999999876442       22   57999999999885321        11111122233558899999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      +-|+..+..+.
T Consensus       247 ~~Iv~ai~~n~  257 (300)
T KOG1201|consen  247 KRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHcCC
Confidence            99999887764

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=2.4e-15  Score=148.45  Aligned_cols=240  Identities=16%  Similarity=0.022  Sum_probs=172.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+.||||-||+-|++|++.|++.|+.|.++.|..+....-.-.+.++         +.+...+++++.+||+|...+.+
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~---------~~~~~~~l~l~~gDLtD~~~l~r   72 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED---------PHLNDPRLHLHYGDLTDSSNLLR   72 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc---------cccCCceeEEEeccccchHHHHH
Confidence            578999999999999999999999999999999743211100011111         33445679999999999999999


Q ss_pred             HhCC--CcEEEEcccCC--CCccCCCCcchHhHHHHHHHHHHHHHhcCC--CEEEEEcCCCccC-----CCCccccccch
Q 009648          160 ALGN--ASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTNK-----FGFPAAILNLF  228 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~--~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv--~r~V~iSS~~v~~-----~~~~~~~~~~~  228 (530)
                      +++.  -|-|+|+|+..  ..+...+....+++-.|+.+|+++.+..|.  -||...||.-.+.     ...+..+..|.
T Consensus        73 ~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr  152 (345)
T COG1089          73 ILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR  152 (345)
T ss_pred             HHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC
Confidence            9975  49999999843  456666788889999999999999998754  3888888864322     12445667888


Q ss_pred             hHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccc-ccccc-------eeecccC-------cccCCCCCHHHHH
Q 009648          229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAY-KETHN-------ITLSQED-------TLFGGQVSNLQVA  289 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~-~~~~~-------~~~~~~~-------~~~~g~V~v~DVA  289 (530)
                      ++|+..|.-+--+..    .+|+-.+.=...+-.+|.... +-+..       +..+..+       ....+|-|..|.+
T Consensus       153 SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYV  232 (345)
T COG1089         153 SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYV  232 (345)
T ss_pred             CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHH
Confidence            999999988765543    366655433333333443221 11111       1112211       2234688999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +++|.+|+.+.   ...|.|..++..+.++++++..+..|..
T Consensus       233 e~mwlmLQq~~---PddyViATg~t~sVrefv~~Af~~~g~~  271 (345)
T COG1089         233 EAMWLMLQQEE---PDDYVIATGETHSVREFVELAFEMVGID  271 (345)
T ss_pred             HHHHHHHccCC---CCceEEecCceeeHHHHHHHHHHHcCce
Confidence            99999999886   7789999999999999999999888843

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.65  E-value=8.8e-15  Score=155.66  Aligned_cols=253  Identities=17%  Similarity=0.183  Sum_probs=164.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl  151 (530)
                      ..+|+|||||||||+|.-|++.|++.-   .+++++.|....   .+.+.+.... .+....-........++..+.||+
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~-~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD-PLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh-hHHHHHHhhCccceecceeccccc
Confidence            457899999999999999999999863   488888886532   1111111110 010000001112346888999999


Q ss_pred             CCH------hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCC-C----
Q 009648          152 EKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF-G----  219 (530)
Q Consensus       152 ~d~------~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~-~----  219 (530)
                      .++      .+++..++++|+|||+||....+ ........+|+.|+.++++.|++. +.+-|||+|+.-++-. +    
T Consensus        89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E  167 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE  167 (467)
T ss_pred             cCcccCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence            864      44566778999999999865543 223456789999999999999987 6789999999754311 0    


Q ss_pred             ------C---ccc-----------c---------ccchhHHHHHHHHHHHHHHH--CCCCEEEEEcCcccCCC-------
Q 009648          220 ------F---PAA-----------I---------LNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGGMERPT-------  261 (530)
Q Consensus       220 ------~---~~~-----------~---------~~~~~~Y~~sK~~~E~~l~~--~gl~~tIvRPg~V~Gp~-------  261 (530)
                            .   ++.           .         ...-..|.-+|+.+|+++.+  .+++.+|+||+.|....       
T Consensus       168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGW  247 (467)
T KOG1221|consen  168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGW  247 (467)
T ss_pred             cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCc
Confidence                  0   000           0         01122489999999999986  68999999999986432       


Q ss_pred             -cccccccceeeccc----------CcccCCCCCHHHHHHHHHHHHhC--CCC--CCCcEEEEeCCC--CCChhHHHHHH
Q 009648          262 -DAYKETHNITLSQE----------DTLFGGQVSNLQVAELLACMAKN--RSL--SYCKVVEVIAET--TAPLTPMEELL  324 (530)
Q Consensus       262 -~~~~~~~~~~~~~~----------~~~~~g~V~v~DVA~ai~~ll~~--~~~--~~g~vynv~~~~--~~t~~~i~ell  324 (530)
                       ++...-..+.++.+          .....+.|.+|.++.+++.+...  ...  ..-.+||++...  .+++.++.++.
T Consensus       248 idn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~  327 (467)
T KOG1221|consen  248 IDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELA  327 (467)
T ss_pred             cccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHH
Confidence             11111122222222          12223569999999999876532  110  124599998854  34788888888


Q ss_pred             HhcCCCCC
Q 009648          325 AKIPSQRA  332 (530)
Q Consensus       325 ~~v~g~~~  332 (530)
                      .+.+...+
T Consensus       328 ~~~~~~~P  335 (467)
T KOG1221|consen  328 LRYFEKIP  335 (467)
T ss_pred             HHhcccCC
Confidence            88877544

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.64  E-value=3e-15  Score=138.04  Aligned_cols=162  Identities=19%  Similarity=0.166  Sum_probs=120.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ++++|+||+|+||.++++.|+++|+ .|+++.|+..........+..++          ....++.++.+|+.+.+.+.+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~~~   70 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELE----------ALGAEVTVVACDVADRAALAA   70 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHH----------hcCCeEEEEECCCCCHHHHHH
Confidence            4799999999999999999999996 78888887654433221111110          012567889999999887776


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcccccc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILN  226 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~  226 (530)
                      ++       ..+|+|||++|....      +..++...+++|+.++.++++++.+.+.++||++||......      ..
T Consensus        71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~------~~  144 (180)
T smart00822       71 ALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLG------NP  144 (180)
T ss_pred             HHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcC------CC
Confidence            65       347999999985422      122345668999999999999998888889999999755322      12


Q ss_pred             chhHHHHHHHHHHHHHH---HCCCCEEEEEcCccc
Q 009648          227 LFWGVLLWKRKAEEALI---ASGLPYTIVRPGGME  258 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~  258 (530)
                      ....|+.+|...+.+++   ..+++++++.+|.+-
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      145 GQANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence            34579999999988865   478999999998864

It uses NADPH to reduce the keto group to a hydroxy group.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.62  E-value=9.5e-15  Score=135.37  Aligned_cols=145  Identities=19%  Similarity=0.209  Sum_probs=115.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECC--chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS--VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~--~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+|+||||+|.||+.+++.|+++| +.|+++.|+  .+....+.+.+...             ..++.++++|+.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~-------------~~~~~~~~~D~~~~~~~   67 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP-------------GAKITFIECDLSDPESI   67 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT-------------TSEEEEEESETTSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc-------------ccccccccccccccccc
Confidence            579999999999999999999995 688888998  55666665554432             26899999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +.++       ..+|+||||+|......      .++...+++|+.+...+.+++..++-++||++||......      
T Consensus        68 ~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  141 (167)
T PF00106_consen   68 RALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG------  141 (167)
T ss_dssp             HHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS------
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccC------
Confidence            7766       46899999999654222      2345679999999999999998876779999999876432      


Q ss_pred             ccchhHHHHHHHHHHHHHHH
Q 009648          225 LNLFWGVLLWKRKAEEALIA  244 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~  244 (530)
                      ......|..+|++.+.+++.
T Consensus       142 ~~~~~~Y~askaal~~~~~~  161 (167)
T PF00106_consen  142 SPGMSAYSASKAALRGLTQS  161 (167)
T ss_dssp             STTBHHHHHHHHHHHHHHHH
T ss_pred             CCCChhHHHHHHHHHHHHHH
Confidence            23456799999999988763

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.60  E-value=9.7e-15  Score=140.25  Aligned_cols=214  Identities=18%  Similarity=0.178  Sum_probs=150.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+++||||.|+||+.+.++|+++|..+.++..+.++.+...+ ++           ...+...+.|+++|+++..++
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~-----------ai~p~~~v~F~~~DVt~~~~~   70 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQ-----------AINPSVSVIFIKCDVTNRGDL   70 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-Hh-----------ccCCCceEEEEEeccccHHHH
Confidence            458999999999999999999999999999888887777554432 22           235567899999999998888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCccCCCCcchHhHHHHH----HHHHHHHHhc---CCCEEEEEcCCCccCCCCccc
Q 009648          158 EPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQAT----KNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt----~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      +++|       +.+|++||+||...  ..+++..+.+|+.|.    ...+..+.+.   ..+-||++||......     
T Consensus        71 ~~~f~ki~~~fg~iDIlINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P-----  143 (261)
T KOG4169|consen   71 EAAFDKILATFGTIDILINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP-----  143 (261)
T ss_pred             HHHHHHHHHHhCceEEEEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc-----
Confidence            8777       46899999999765  455777888897764    4556666544   2347999999765222     


Q ss_pred             cccchhHHHHHHHHH---------HHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCc-----ccCCCCCHHHHH
Q 009648          224 ILNLFWGVLLWKRKA---------EEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT-----LFGGQVSNLQVA  289 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~---------E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~-----~~~g~V~v~DVA  289 (530)
                       ..-+..|+++|+.+         +.+.+..|+++..|+||.+-.............+..++.     .....-+..+++
T Consensus       144 -~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a  222 (261)
T KOG4169|consen  144 -MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCA  222 (261)
T ss_pred             -cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHH
Confidence             23345699999854         344456899999999998743211111010111111111     112345678999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      +-++++++...  .|.+|-+..+.
T Consensus       223 ~~~v~aiE~~~--NGaiw~v~~g~  244 (261)
T KOG4169|consen  223 INIVNAIEYPK--NGAIWKVDSGS  244 (261)
T ss_pred             HHHHHHHhhcc--CCcEEEEecCc
Confidence            99999999965  57777776654

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.60  E-value=9.1e-15  Score=135.12  Aligned_cols=194  Identities=20%  Similarity=0.256  Sum_probs=144.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|.++|.||||..|+.|++.+++.+  .+|+++.|.+.-..                    .....|..+..|+...+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~--------------------at~k~v~q~~vDf~Kl~   75 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP--------------------ATDKVVAQVEVDFSKLS   75 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc--------------------cccceeeeEEechHHHH
Confidence            456789999999999999999999998  59999999852111                    11367888899999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHH
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK  235 (530)
                      ++...+.+.|+.+||.|.+.... .....++++-.-...++++|++.|+++||++||.|++..        ....|.+.|
T Consensus        76 ~~a~~~qg~dV~FcaLgTTRgka-GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~s--------SrFlY~k~K  146 (238)
T KOG4039|consen   76 QLATNEQGPDVLFCALGTTRGKA-GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPS--------SRFLYMKMK  146 (238)
T ss_pred             HHHhhhcCCceEEEeeccccccc-ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcc--------cceeeeecc
Confidence            99999999999999999664322 245667888888999999999999999999999988442        234699999


Q ss_pred             HHHHHHHHHCCC-CEEEEEcCcccCCCcccccc---cceeecccCcccC--CCCCHHHHHHHHHHHHhCCC
Q 009648          236 RKAEEALIASGL-PYTIVRPGGMERPTDAYKET---HNITLSQEDTLFG--GQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       236 ~~~E~~l~~~gl-~~tIvRPg~V~Gp~~~~~~~---~~~~~~~~~~~~~--g~V~v~DVA~ai~~ll~~~~  300 (530)
                      .++|+-+.+.++ +++|+|||.+.+....+...   .++....-...+.  --..+--++.+++..+....
T Consensus       147 GEvE~~v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amvn~~~~~~  217 (238)
T KOG4039|consen  147 GEVERDVIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMVNVLNTSG  217 (238)
T ss_pred             chhhhhhhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHhhccccCC
Confidence            999999988776 69999999999865433111   1111111111111  12456677788888665544

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=6.6e-14  Score=144.10  Aligned_cols=211  Identities=17%  Similarity=0.085  Sum_probs=144.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++++||||+++||.++++.|+++|++|++.+|+.++.....+.+.+-           .....+.++++||.+..+
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~-----------~~~~~i~~~~lDLssl~S  100 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKG-----------KANQKIRVIQLDLSSLKS  100 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-----------CCCCceEEEECCCCCHHH
Confidence            345689999999999999999999999999999999998888877766641           335788999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCc
Q 009648          157 IEPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +.++.       ...|++|||||....    .....+..+.+|+.|+..|.+.+    +.....|||++||........-
T Consensus       101 V~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~  180 (314)
T KOG1208|consen  101 VRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDL  180 (314)
T ss_pred             HHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccch
Confidence            87665       357999999996532    22346777999999977776654    4444369999999765111111


Q ss_pred             cc----c---ccchhHHHHHHHHHHHHHH----H--CCCCEEEEEcCcccCCCcccccccceeecccCcccCCC-CCHHH
Q 009648          222 AA----I---LNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQ  287 (530)
Q Consensus       222 ~~----~---~~~~~~Y~~sK~~~E~~l~----~--~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~-V~v~D  287 (530)
                      +.    .   ......|+.+|.+...+.+    .  .|+.++.+.||.|.+.+-..  ...+.......+...+ -+.++
T Consensus       181 ~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~ks~~~  258 (314)
T KOG1208|consen  181 KDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLTKSPEQ  258 (314)
T ss_pred             hhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec--chHHHHHHHHHHHHHhccCHHH
Confidence            11    0   2233359999998654443    2  38999999999998763211  0000000000011111 25677


Q ss_pred             HHHHHHHHHhCCC
Q 009648          288 VAELLACMAKNRS  300 (530)
Q Consensus       288 VA~ai~~ll~~~~  300 (530)
                      -|..+++++.++.
T Consensus       259 ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  259 GAATTCYAALSPE  271 (314)
T ss_pred             HhhheehhccCcc
Confidence            7777777777764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.57  E-value=1.1e-13  Score=142.00  Aligned_cols=229  Identities=14%  Similarity=0.096  Sum_probs=135.9

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhcccc-ccCC-----------CCCCC
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELA-NKGI-----------QPVEM  143 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~-~~g~-----------~~~~~  143 (530)
                      .++|++|||||+  .+||+++++.|+++|++|++.+|.+ ++....+.....+..-... ..|.           .....
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~   84 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT   84 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence            568899999995  8999999999999999999987652 1111111000000000000 0000           00012


Q ss_pred             eEEEEecCCCH--------hhHHH-------HhCCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHHH
Q 009648          144 LELVECDLEKR--------VQIEP-------ALGNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAAT  200 (530)
Q Consensus       144 v~~v~~Dl~d~--------~sl~~-------a~~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa~  200 (530)
                      .+-+.+|+++.        +++++       .++++|++|||||...        .+..++...+++|+.+..++++++.
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22333333331        12333       3357899999998532        1223456778999999999988877


Q ss_pred             hc--CCCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHH-------H-CCCCEEEEEcCcccCCCcccccc-c
Q 009648          201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-H  268 (530)
Q Consensus       201 ~~--gv~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl~~tIvRPg~V~Gp~~~~~~~-~  268 (530)
                      ..  ..++||++||...... .     ..+ ..|+.+|++.+.+.+       . .|++++.|.||++..+....... .
T Consensus       165 p~m~~~G~ii~iss~~~~~~-~-----p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~  238 (299)
T PRK06300        165 PIMNPGGSTISLTYLASMRA-V-----PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIE  238 (299)
T ss_pred             HHhhcCCeEEEEeehhhcCc-C-----CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccH
Confidence            53  2358999998655321 1     112 269999999987765       1 38999999999998764211000 0


Q ss_pred             cee-ecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          269 NIT-LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       269 ~~~-~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ... ........+.....+|||+++++++... ....|+++.+.++.
T Consensus       239 ~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  285 (299)
T PRK06300        239 RMVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGA  285 (299)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            000 0001111234567999999999999764 33567888776653

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.56  E-value=6e-15  Score=136.04  Aligned_cols=213  Identities=14%  Similarity=0.082  Sum_probs=155.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|||+.-+||+.+|..|++.|.+|+++.|++..+..+.++                ....++.+.+|+.+.+.+
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e----------------~p~~I~Pi~~Dls~wea~   68 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE----------------TPSLIIPIVGDLSAWEAL   68 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh----------------CCcceeeeEecccHHHHH
Confidence            5678999999999999999999999999999999999988887642                234588899999998888


Q ss_pred             HHHhCC---CcEEEEcccCC------CCccCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCCCCccc
Q 009648          158 EPALGN---ASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       158 ~~a~~~---vD~VI~~Ag~~------~~~~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      .+++..   +|.+|||||..      +...+++...|++|+.+..++.+..++     ..-+.||++||.+..+.     
T Consensus        69 ~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~-----  143 (245)
T KOG1207|consen   69 FKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP-----  143 (245)
T ss_pred             HHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc-----
Confidence            888754   69999999953      224455677799999998888777443     22347999999876443     


Q ss_pred             cccchhHHHHHHHHHHHHHH----H---CCCCEEEEEcCcccCCCcc--cccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPTDA--YKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~----~---~gl~~tIvRPg~V~Gp~~~--~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                       ......|..+|.+.+.+.+    +   ..||++.|.|..|....+.  |..-....--......+.|-.++.|.+++.+
T Consensus       144 -~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lf  222 (245)
T KOG1207|consen  144 -LDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLF  222 (245)
T ss_pred             -cCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhhee
Confidence             4445679999999887765    2   5689999999999765322  2111111000111223456778999999999


Q ss_pred             HHhCCC-CCCCcEEEEeCC
Q 009648          295 MAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       295 ll~~~~-~~~g~vynv~~~  312 (530)
                      +|.+.. ...|.++-+-++
T Consensus       223 LLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  223 LLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eeecCcCcccCceeeecCC
Confidence            998654 344555555444

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.54  E-value=2.9e-13  Score=130.12  Aligned_cols=199  Identities=15%  Similarity=0.098  Sum_probs=133.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEE-EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~-~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.|+||||+.+||..||++|++. |.++++ ..|+++++....+   ..          ...+.++++++.|+++.+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~---~k----------~~~d~rvHii~Ldvt~deS~   69 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELA---LK----------SKSDSRVHIIQLDVTCDESI   69 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHH---Hh----------hccCCceEEEEEecccHHHH
Confidence            356999999999999999999986 666655 4556777522221   10          12258999999999998887


Q ss_pred             HHHh---------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHH----HHhcCCC-----------E
Q 009648          158 EPAL---------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAKVN-----------H  206 (530)
Q Consensus       158 ~~a~---------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~-----------r  206 (530)
                      .+++         +|+|++|||||....       ....+...+++|..++..+.++    ++++..+           .
T Consensus        70 ~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raa  149 (249)
T KOG1611|consen   70 DNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAA  149 (249)
T ss_pred             HHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccccccee
Confidence            7665         478999999995422       1112456689998876655444    3333222           7


Q ss_pred             EEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCccc
Q 009648          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF  279 (530)
Q Consensus       207 ~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~  279 (530)
                      ||++||.+....+   ....++.+|..+|.+.-.+.+.       .++-++.++||||-+..+.               .
T Consensus       150 IinisS~~~s~~~---~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg---------------~  211 (249)
T KOG1611|consen  150 IINISSSAGSIGG---FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG---------------K  211 (249)
T ss_pred             EEEeeccccccCC---CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC---------------C
Confidence            8999997654222   2245678899999998888764       5677889999999764321               2


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCC-CCcEEEE
Q 009648          280 GGQVSNLQVAELLACMAKNRSLS-YCKVVEV  309 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~~-~g~vynv  309 (530)
                      ...+.+++-+.-++..+.+-... .|+.||-
T Consensus       212 ~a~ltveeSts~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  212 KAALTVEESTSKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             CcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence            23477877777777766542222 3444443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=1.3e-13  Score=138.31  Aligned_cols=203  Identities=15%  Similarity=0.103  Sum_probs=146.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|+||||+.+||..|+.++..+|++|+++.|+..++.++..+++-.           .....|.+..+|+.|.+++...
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~-----------~~~~~v~~~S~d~~~Y~~v~~~  102 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELL-----------TQVEDVSYKSVDVIDYDSVSKV  102 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhh-----------hccceeeEeccccccHHHHHHH
Confidence            68999999999999999999999999999999999999887766533           1123477899999998888777


Q ss_pred             hC-------CCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHHHHhc-----CCCEEEEEcCCCccCCCCcc
Q 009648          161 LG-------NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       .+|.+|||||...      .+..+....+++|+.|+.|+++++..+     +.++||.+||..+...    
T Consensus       103 ~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~----  178 (331)
T KOG1210|consen  103 IEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG----  178 (331)
T ss_pred             HhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC----
Confidence            74       4699999999542      233334566899999999998887643     2448999999644221    


Q ss_pred             ccccchhHHHHHHHHHHHHH-------HHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ..+++.|..+|.+...+.       ..+|++++..-|+.+..|+........-..-.-.....+.+.-+|+|.+++.-
T Consensus       179 --i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  179 --IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             --cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhH
Confidence              344567888888755332       34799999999999998864322111100000011112347789999999988


Q ss_pred             HhCCC
Q 009648          296 AKNRS  300 (530)
Q Consensus       296 l~~~~  300 (530)
                      +..+.
T Consensus       257 ~~rg~  261 (331)
T KOG1210|consen  257 MKRGN  261 (331)
T ss_pred             HhhcC
Confidence            87765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.52  E-value=4.4e-13  Score=132.58  Aligned_cols=167  Identities=22%  Similarity=0.247  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC-
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-  153 (530)
                      +..+++||||||+++||+++++.|+++|++|+++.|+...  .+.+.+... .        .+.   ..+.+..+|+++ 
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~--------~~~---~~~~~~~~Dvs~~   69 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E--------AGG---GRAAAVAADVSDD   69 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h--------cCC---CcEEEEEecCCCC
Confidence            3567899999999999999999999999999999988764  233222211 0        010   367788899998 


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~  218 (530)
                      .++++.++       +++|++|||||....       ...++...+++|+.+...+.+++... ..++||++||.... .
T Consensus        70 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~  148 (251)
T COG1028          70 EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-G  148 (251)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-C
Confidence            77766555       458999999996532       12235667999999988888744322 11199999998764 3


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT  261 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~  261 (530)
                      ....     +..|+.+|++.+.+.+       ..|++++.|.||.+..+.
T Consensus       149 ~~~~-----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         149 GPPG-----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             CCCC-----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence            2211     4679999999876654       368999999999776543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.52  E-value=2.7e-13  Score=134.21  Aligned_cols=191  Identities=18%  Similarity=0.158  Sum_probs=131.4

Q ss_pred             HHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC----CCcEEEEcc
Q 009648           96 TVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG----NASVVICCI  171 (530)
Q Consensus        96 Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~----~vD~VI~~A  171 (530)
                      +++.|+++|++|++++|+.++..                        ..+++++|+.|.+++.++++    ++|+|||||
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~------------------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nA   56 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT------------------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIA   56 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh------------------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECC
Confidence            47899999999999999876421                        12456799999999888775    589999999


Q ss_pred             cCCCCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc---------------------cccccch
Q 009648          172 GASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP---------------------AAILNLF  228 (530)
Q Consensus       172 g~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~---------------------~~~~~~~  228 (530)
                      |...  ..++...+++|+.++..+++++...  +.++||++||.........                     .......
T Consensus        57 G~~~--~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (241)
T PRK12428         57 GVPG--TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA  134 (241)
T ss_pred             CCCC--CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc
Confidence            9653  2356678999999999999998754  3369999999866321100                     0123345


Q ss_pred             hHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCccccccc--ceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          229 WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~~~~~~~--~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      ..|+.+|++.+.+.+        ..|+++++|+||+|.++........  ...........+.....+|+|+++++++.+
T Consensus       135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcCh
Confidence            689999999876543        2589999999999998743211000  000000111123356899999999999865


Q ss_pred             CC-CCCCcEEEEeCC
Q 009648          299 RS-LSYCKVVEVIAE  312 (530)
Q Consensus       299 ~~-~~~g~vynv~~~  312 (530)
                      .. ...|+.+.+.++
T Consensus       215 ~~~~~~G~~i~vdgg  229 (241)
T PRK12428        215 AARWINGVNLPVDGG  229 (241)
T ss_pred             hhcCccCcEEEecCc
Confidence            42 235666666555

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.48  E-value=6e-13  Score=133.89  Aligned_cols=162  Identities=22%  Similarity=0.192  Sum_probs=125.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ....|-|||||+-.+.|+.|+++|.++|+.|.+.+-.++..+.+...               ...+++..++.|++++++
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~---------------~~s~rl~t~~LDVT~~es   90 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGE---------------TKSPRLRTLQLDVTKPES   90 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhh---------------hcCCcceeEeeccCCHHH
Confidence            35567899999999999999999999999999999877776665432               114789999999999999


Q ss_pred             HHHHh---------CCCcEEEEcccCCC-CccC------CCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCcc
Q 009648          157 IEPAL---------GNASVVICCIGASE-KEVF------DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (530)
Q Consensus       157 l~~a~---------~~vD~VI~~Ag~~~-~~~~------~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~  216 (530)
                      ++++.         ++.-.||||||+.. ....      ++...+++|+.|+.++..+..    ++. +|+|++||.+..
T Consensus        91 i~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR  169 (322)
T KOG1610|consen   91 VKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGR  169 (322)
T ss_pred             HHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccC
Confidence            98877         35799999999542 2222      345679999999877766654    444 599999998762


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHH-------HHCCCCEEEEEcCcccCC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERP  260 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tIvRPg~V~Gp  260 (530)
                      -.      .....+|..+|.++|.+.       +..|+++.||-||.+-.+
T Consensus       170 ~~------~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  170 VA------LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             cc------CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence            21      234567999999999663       348999999999955433

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.45  E-value=2.9e-13  Score=130.02  Aligned_cols=193  Identities=20%  Similarity=0.157  Sum_probs=145.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      .+++|.|+.||.|+++++.....|+.|.++.|+..+.  ++                ..+...+.+..+|.....-+...
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~--~l----------------~sw~~~vswh~gnsfssn~~k~~  114 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ--TL----------------SSWPTYVSWHRGNSFSSNPNKLK  114 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc--hh----------------hCCCcccchhhccccccCcchhh
Confidence            4689999999999999999999999999999997531  11                13456788888888776667777


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      +.+...|+-++|....    ...+.++|-.+..+.+++++++|+++|||||...   ++.+.   .-..+|...|+++|.
T Consensus       115 l~g~t~v~e~~ggfgn----~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d---~~~~~---~i~rGY~~gKR~AE~  184 (283)
T KOG4288|consen  115 LSGPTFVYEMMGGFGN----IILMDRINGTANINAVKAAAKAGVPRFVYISAHD---FGLPP---LIPRGYIEGKREAEA  184 (283)
T ss_pred             hcCCcccHHHhcCccc----hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh---cCCCC---ccchhhhccchHHHH
Confidence            8899999999885432    3566788999999999999999999999999643   32221   123479999999997


Q ss_pred             HHH-HCCCCEEEEEcCcccCCCcccccccce-------------------eecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          241 ALI-ASGLPYTIVRPGGMERPTDAYKETHNI-------------------TLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       241 ~l~-~~gl~~tIvRPg~V~Gp~~~~~~~~~~-------------------~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      .+. ..+++-+|||||.|||..........+                   .+..-+.+....|.+++||.+++.++++++
T Consensus       185 Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  185 ELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             HHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence            776 478999999999999974321110000                   011122333456999999999999999998


Q ss_pred             C
Q 009648          301 L  301 (530)
Q Consensus       301 ~  301 (530)
                      +
T Consensus       265 f  265 (283)
T KOG4288|consen  265 F  265 (283)
T ss_pred             c
Confidence            5

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.45  E-value=1.9e-12  Score=122.79  Aligned_cols=160  Identities=17%  Similarity=0.099  Sum_probs=120.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+||||||+.+||+.|+++|.+.|-+|+++.|++.++++....                 .+.+.-+.||+.|.+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~-----------------~p~~~t~v~Dv~d~~~~   65 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----------------NPEIHTEVCDVADRDSR   65 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc-----------------CcchheeeecccchhhH
Confidence            4567999999999999999999999999999999999988776531                 36778888999998876


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc----c----CCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEKE----V----FDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~----~----~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~~  218 (530)
                      +++++       ..+++|||||.....    .    .+....+++|+.+..+|..++..+    .-..||.+||.-+...
T Consensus        66 ~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP  145 (245)
T COG3967          66 RELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP  145 (245)
T ss_pred             HHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence            66552       479999999964321    1    112455789999988887776543    3458999999654222


Q ss_pred             CCccccccchhHHHHHHHHHHHH-------HHHCCCCEEEEEcCcccCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERP  260 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~-------l~~~gl~~tIvRPg~V~Gp  260 (530)
                            +.....|..+|+++-.+       ++..+++++=|-|..|..+
T Consensus       146 ------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         146 ------MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ------ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                  33344699999986544       3346889998999888765

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=1.3e-12  Score=124.25  Aligned_cols=159  Identities=14%  Similarity=0.141  Sum_probs=121.8

Q ss_pred             CCCCEEEEECC-CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGA-tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...++|||||+ .|+||.+|+++|.++|+.|++..|..+....|...                  -++...+.|+.++++
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------------------~gl~~~kLDV~~~~~   66 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------------------FGLKPYKLDVSKPEE   66 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------------------hCCeeEEeccCChHH
Confidence            45678998875 59999999999999999999999999888776531                  468889999999988


Q ss_pred             HHHHh--------CCCcEEEEcccCC------CCccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCC
Q 009648          157 IEPAL--------GNASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~--------~~vD~VI~~Ag~~------~~~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~  219 (530)
                      +....        +..|++|||||..      +.+..+.+..|++|+.|..++.++....   ..+.||++.|..+...+
T Consensus        67 V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf  146 (289)
T KOG1209|consen   67 VVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF  146 (289)
T ss_pred             HHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc
Confidence            76654        3479999999954      2233345677999999988887776532   23589999998663321


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERP  260 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp  260 (530)
                            .....|.++|+++-++.+.       .|++++.+-+|.|-..
T Consensus       147 ------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  147 ------PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             ------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence                  2234699999999888763       6888888888888654

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.38  E-value=6.2e-12  Score=157.38  Aligned_cols=176  Identities=14%  Similarity=0.111  Sum_probs=123.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCch-----------hHHHHHHHH----HH---------------
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQ-----------RAENLVQSV----KQ---------------  126 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~-----------k~~~l~~~~----~~---------------  126 (530)
                      ..+++||||||+|+||..++++|+++ |++|++++|+..           ....+...+    ..               
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            35789999999999999999999998 699999999821           000000000    00               


Q ss_pred             -----hhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC------CCcEEEEcccCCC------CccCCCCcchHhHH
Q 009648          127 -----MKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG------NASVVICCIGASE------KEVFDITGPYRIDF  189 (530)
Q Consensus       127 -----~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~------~vD~VI~~Ag~~~------~~~~~~~~~~~vNv  189 (530)
                           ..+.... ..-......+.++.+|++|.+++.++++      ++|+||||||...      .+..++...+++|+
T Consensus      2075 ~~~~~~ei~~~l-a~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQAL-AAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                 0000000 0000012578899999999988877773      5899999999542      23344667899999


Q ss_pred             HHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCC
Q 009648          190 QATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERP  260 (530)
Q Consensus       190 ~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp  260 (530)
                      .|+.+|++++.....++||++||..... +.     .....|+.+|...+.+.+.     .+++++.|.+|.+.|.
T Consensus      2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~-G~-----~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2154 DGLLSLLAALNAENIKLLALFSSAAGFY-GN-----TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEechhhcC-CC-----CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence            9999999999887777999999986532 22     2345799999988766542     3689999999998764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.35  E-value=1.4e-11  Score=117.27  Aligned_cols=157  Identities=20%  Similarity=0.192  Sum_probs=110.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch---hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~---k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++|||||.|.||..+++.|+++| .+|+++.|+..   ....+.+++++.             ..+|+++.+|++|.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~-------------g~~v~~~~~Dv~d~~~v   68 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA-------------GARVEYVQCDVTDPEAV   68 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT-------------T-EEEEEE--TTSHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC-------------CCceeeeccCccCHHHH
Confidence            68999999999999999999998 58999999932   333344444432             25899999999999999


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      .+++.       .++.|||+||.....      ..+....+...+.+..+|.++........||++||+.... |.    
T Consensus        69 ~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~-G~----  143 (181)
T PF08659_consen   69 AAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLL-GG----  143 (181)
T ss_dssp             HHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHT-T-----
T ss_pred             HHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhc-cC----
Confidence            98883       468999999964321      1223445677789999999999988999999999975422 21    


Q ss_pred             ccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcc
Q 009648          225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGM  257 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V  257 (530)
                       .....|+......+.+.+   ..|++++.|.-|.+
T Consensus       144 -~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  144 -PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             -cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence             124569988888887765   47889888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.28  E-value=6.3e-11  Score=119.33  Aligned_cols=165  Identities=17%  Similarity=0.141  Sum_probs=124.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh---
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ---  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s---  156 (530)
                      +.-.+|||||.+||++.+++|+++|++|+++.|+.+|++.+.+++.+.            ..-.+.++.+|+++.+.   
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~------------~~vev~~i~~Dft~~~~~ye  116 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK------------YKVEVRIIAIDFTKGDEVYE  116 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH------------hCcEEEEEEEecCCCchhHH
Confidence            356899999999999999999999999999999999999999888754            12468889999987654   


Q ss_pred             -HHHHhCC--CcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc
Q 009648          157 -IEPALGN--ASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 -l~~a~~~--vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                       +.+.+.+  +.++|||+|.....        .......+.+|+.++..+.+.    |.+.+-+-||++||.+.-..   
T Consensus       117 ~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p---  193 (312)
T KOG1014|consen  117 KLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP---  193 (312)
T ss_pred             HHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc---
Confidence             5555554  67899999965321        113355677888775555444    55666678999999865332   


Q ss_pred             cccccchhHHHHHHHHHHHHH-------HHCCCCEEEEEcCcccCCCc
Q 009648          222 AAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTD  262 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tIvRPg~V~Gp~~  262 (530)
                         ...+..|+++|...+.+-       +..|+.+-.|-|..|-+...
T Consensus       194 ---~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~  238 (312)
T KOG1014|consen  194 ---TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA  238 (312)
T ss_pred             ---ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence               445677999999766443       34799999999999877644

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.26  E-value=9.5e-12  Score=114.82  Aligned_cols=215  Identities=15%  Similarity=0.167  Sum_probs=148.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++...|||||..++|+..++.|+++|..|.+++-..++-....+++            |    .++.|...|++.+.+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------------g----~~~vf~padvtsekd   69 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------------G----GKVVFTPADVTSEKD   69 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------------C----CceEEeccccCcHHH
Confidence            456678899999999999999999999999999998887766655432            2    689999999999888


Q ss_pred             HHHHh-------CCCcEEEEcccCC------------CCccCCCCcchHhHHHHHHHHHHHHHh--------cCCCEEEE
Q 009648          157 IEPAL-------GNASVVICCIGAS------------EKEVFDITGPYRIDFQATKNLVDAATI--------AKVNHFIM  209 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~------------~~~~~~~~~~~~vNv~gt~~Ll~aa~~--------~gv~r~V~  209 (530)
                      +..++       +..|+.|||||..            .++..+++..+++|+.|+.|+++.-..        ++..|=|.
T Consensus        70 v~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgvi  149 (260)
T KOG1199|consen   70 VRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVI  149 (260)
T ss_pred             HHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEE
Confidence            87776       4689999999952            123345677789999999999887541        23334444


Q ss_pred             EcCCCccCCCCccccccchhHHHHHHHHHHHH----HHH---CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCC
Q 009648          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA----LIA---SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGG  281 (530)
Q Consensus       210 iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~----l~~---~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g  281 (530)
                      |.+..+..+.-    ......|..+|.++--+    .|+   .||+++.|.||.+-.|......... -.+.....+...
T Consensus       150 intasvaafdg----q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfpsr  225 (260)
T KOG1199|consen  150 INTASVAAFDG----QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSR  225 (260)
T ss_pred             EeeceeeeecC----ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchh
Confidence            44443322211    12345699999874422    233   6899999999999877432211110 011111122223


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      .-|..+-+..+.++++|+- ..|+++.+.+-
T Consensus       226 lg~p~eyahlvqaiienp~-lngevir~dga  255 (260)
T KOG1199|consen  226 LGHPHEYAHLVQAIIENPY-LNGEVIRFDGA  255 (260)
T ss_pred             cCChHHHHHHHHHHHhCcc-cCCeEEEecce
Confidence            4578899999999999986 46777777654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.24  E-value=6.5e-10  Score=105.64  Aligned_cols=155  Identities=15%  Similarity=0.113  Sum_probs=112.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+||||+||+|. +++.|+++|++|++++|+.++...+...+.              ...++.++.+|+.|.+++.++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~--------------~~~~i~~~~~Dv~d~~sv~~~   65 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKREST--------------TPESITPLPLDYHDDDALKLA   65 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhh--------------cCCcEEEEEccCCCHHHHHHH
Confidence            57999999998876 999999999999999999876655543221              125788999999999988877


Q ss_pred             hC-------CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC----EEEEEcCCCccCCCCccccccchh
Q 009648          161 LG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN----HFIMVSSLGTNKFGFPAAILNLFW  229 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~----r~V~iSS~~v~~~~~~~~~~~~~~  229 (530)
                      ++       .+|++|+.+-                +.++.+++.+|++.|++    +|||+=...+...           
T Consensus        66 i~~~l~~~g~id~lv~~vh----------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------  118 (177)
T PRK08309         66 IKSTIEKNGPFDLAVAWIH----------------SSAKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------  118 (177)
T ss_pred             HHHHHHHcCCCeEEEEecc----------------ccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------
Confidence            73       4677777653                45789999999999998    8999875544110           


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          230 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                           +...+.... ....|-=|..|.+...                 -...|++-+++++.++.++++..
T Consensus       119 -----~~~~~~~~~-~~~~~~~i~lgf~~~~-----------------~~~rwlt~~ei~~gv~~~~~~~~  166 (177)
T PRK08309        119 -----RIPSEKIGP-ARCSYRRVILGFVLED-----------------TYSRWLTHEEISDGVIKAIESDA  166 (177)
T ss_pred             -----hhhhhhhhh-cCCceEEEEEeEEEeC-----------------CccccCchHHHHHHHHHHHhcCC
Confidence                 112222222 4456666666666422                 12357889999999999998875

>PRK06720 hypothetical protein; Provisional

Probab=99.21  E-value=4.6e-10  Score=105.90  Aligned_cols=125  Identities=14%  Similarity=0.116  Sum_probs=85.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++++||||+|+||+.+++.|+++|++|++++|+.+......+++...             ...+.++.+|+.|.+++
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~v   80 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL-------------GGEALFVSYDMEKQGDW   80 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999887665544443321             14567889999998877


Q ss_pred             HHHh-------CCCcEEEEcccCCCCccCCCC----cchHhHHHHHHHH----HHHHHhc-------CCCEEEEEcCCCc
Q 009648          158 EPAL-------GNASVVICCIGASEKEVFDIT----GPYRIDFQATKNL----VDAATIA-------KVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~~~~~----~~~~vNv~gt~~L----l~aa~~~-------gv~r~V~iSS~~v  215 (530)
                      .+++       +++|++|||||........+.    ....+|+.++..+    +..+.++       ..+||..||+.+.
T Consensus        81 ~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         81 QRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence            6644       578999999996432111111    1123344443333    3333332       4578999998765

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.17  E-value=3.2e-10  Score=109.51  Aligned_cols=237  Identities=12%  Similarity=0.057  Sum_probs=157.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL-GF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|||||+-|.+|..++..|..+ |. .|++-+-.... +.+.                    ..=-++-.|+.|...
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~--------------------~~GPyIy~DILD~K~  101 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT--------------------DVGPYIYLDILDQKS  101 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc--------------------ccCCchhhhhhcccc
Confidence            4568999999999999999988876 65 44443322211 1110                    111356689988888


Q ss_pred             HHHHh--CCCcEEEEcccC-CCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc------ccccc
Q 009648          157 IEPAL--GNASVVICCIGA-SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------AILNL  227 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~-~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~  227 (530)
                      +++.+  ..+|.+||..+. ......+.-...++|+.|..|+++.|++++.+-| .-|++|+.....+.      .+..+
T Consensus       102 L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iF-VPSTIGAFGPtSPRNPTPdltIQRP  180 (366)
T KOG2774|consen  102 LEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVF-VPSTIGAFGPTSPRNPTPDLTIQRP  180 (366)
T ss_pred             HHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEe-ecccccccCCCCCCCCCCCeeeecC
Confidence            88877  569999998762 2223334445678999999999999999998444 46888885543332      34567


Q ss_pred             hhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccccce---------eecccC-----cccCCCCCHHHHH
Q 009648          228 FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI---------TLSQED-----TLFGGQVSNLQVA  289 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~~---------~~~~~~-----~~~~g~V~v~DVA  289 (530)
                      ...||.+|..+|-+-.    ..|+.+-.+|...++........+...         .-+...     ...-...+.+|.-
T Consensus       181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~  260 (366)
T KOG2774|consen  181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCM  260 (366)
T ss_pred             ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHH
Confidence            7889999998885543    478999999987765421111111111         111111     1111347789999


Q ss_pred             HHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCCCccC
Q 009648          290 ELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESI  338 (530)
Q Consensus       290 ~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~~~~~  338 (530)
                      ++++.++..+.. ...++||+++-. .+..++.+.+.++.-.........
T Consensus       261 ~~~~~~~~a~~~~lkrr~ynvt~~s-ftpee~~~~~~~~~p~~~i~y~~~  309 (366)
T KOG2774|consen  261 ASVIQLLAADSQSLKRRTYNVTGFS-FTPEEIADAIRRVMPGFEIDYDIC  309 (366)
T ss_pred             HHHHHHHhCCHHHhhhheeeeceec-cCHHHHHHHHHhhCCCceeecccc
Confidence            999888765432 357899999864 788999999999877665444444

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.12  E-value=1e-10  Score=112.30  Aligned_cols=221  Identities=12%  Similarity=0.012  Sum_probs=144.2

Q ss_pred             CCCEEEEECCCcHHHHHHHH-----HHHhCC----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           79 DDNLAFVAGATGKVGSRTVR-----ELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~-----~Ll~~G----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      +++..++-+++|+|++.|..     .+-+-+    |.|++++|.+.+.                         ++.+-+.
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------------------------ritw~el   65 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------------------------RITWPEL   65 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------------------------ccccchh
Confidence            34567788999999998876     333334    9999999998643                         2333333


Q ss_pred             cCCCHhhHHHHhCCCcEEEEcccCC------CCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC--
Q 009648          150 DLEKRVQIEPALGNASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG--  219 (530)
Q Consensus       150 Dl~d~~sl~~a~~~vD~VI~~Ag~~------~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~--  219 (530)
                      |..-..      ..||+++|++|..      .++..-..+.+...+..+..|+++...+  -.+.+|++|..+.+...  
T Consensus        66 ~~~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s  139 (315)
T KOG3019|consen   66 DFPGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSES  139 (315)
T ss_pred             cCCCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccc
Confidence            322111      1345555555421      1111111223334445588899988865  34579999987664332  


Q ss_pred             ---Cccccccchh--HHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccce--eecccCc-----ccCCCCCHHH
Q 009648          220 ---FPAAILNLFW--GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDT-----LFGGQVSNLQ  287 (530)
Q Consensus       220 ---~~~~~~~~~~--~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~~~-----~~~g~V~v~D  287 (530)
                         .++.....+.  .-.+.||+..........++++||.|.|.|.++.....+.+  .++.++.     .+..|||++|
T Consensus       140 ~eY~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~D  219 (315)
T KOG3019|consen  140 QEYSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDD  219 (315)
T ss_pred             cccccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHH
Confidence               1222222222  23456777666665567999999999999987765444433  2233332     2335799999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++..|.++|+++.  ..+++|-+.++..+..++++.+..++++..
T Consensus       220 L~~li~~ale~~~--v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~  262 (315)
T KOG3019|consen  220 LVNLIYEALENPS--VKGVINGVAPNPVRNGEFCQQLGSALSRPS  262 (315)
T ss_pred             HHHHHHHHHhcCC--CCceecccCCCccchHHHHHHHHHHhCCCc
Confidence            9999999999986  589999999999999999999999998864

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.08  E-value=1.1e-10  Score=112.62  Aligned_cols=195  Identities=15%  Similarity=0.130  Sum_probs=127.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE--------e
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE--------C  149 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~--------~  149 (530)
                      .+++.|||||++.+||..++..+.+.+-++....++....+                      ..++.+..        +
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----------------------~~~L~v~~gd~~v~~~g   61 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----------------------LEGLKVAYGDDFVHVVG   61 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----------------------ccceEEEecCCcceech
Confidence            34678999999999999999999988765554443332111                      12333333        4


Q ss_pred             cCCCHhhHHHHh-------CCCcEEEEcccCCC---------CccCCCCcchHhHHHHHHHHHHHHHhc--C---CCEEE
Q 009648          150 DLEKRVQIEPAL-------GNASVVICCIGASE---------KEVFDITGPYRIDFQATKNLVDAATIA--K---VNHFI  208 (530)
Q Consensus       150 Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~---------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--g---v~r~V  208 (530)
                      |+.....+.+.+       +.-|+||||||...         .+..+|..+|++|+.....|...+...  +   .+.+|
T Consensus        62 ~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vV  141 (253)
T KOG1204|consen   62 DITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVV  141 (253)
T ss_pred             HHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEE
Confidence            444433333333       24699999999431         233346788999999988887766543  2   36799


Q ss_pred             EEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-----C-CCCEEEEEcCcccCCCcccccccc------eeecccC
Q 009648          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----S-GLPYTIVRPGGMERPTDAYKETHN------ITLSQED  276 (530)
Q Consensus       209 ~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~-gl~~tIvRPg~V~Gp~~~~~~~~~------~~~~~~~  276 (530)
                      ++||.....+      ...|..|+++|++.+.+++.     . ++++..++||.|.+..........      +.....-
T Consensus       142 nvSS~aav~p------~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el  215 (253)
T KOG1204|consen  142 NVSSLAAVRP------FSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKEL  215 (253)
T ss_pred             Eecchhhhcc------ccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHH
Confidence            9999877554      56778899999999988763     3 899999999999876432211111      0011111


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC
Q 009648          277 TLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       277 ~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ...+..++..+.|..+..++++..
T Consensus       216 ~~~~~ll~~~~~a~~l~~L~e~~~  239 (253)
T KOG1204|consen  216 KESGQLLDPQVTAKVLAKLLEKGD  239 (253)
T ss_pred             HhcCCcCChhhHHHHHHHHHHhcC
Confidence            122345778888888888888764

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.96  E-value=4.8e-09  Score=102.13  Aligned_cols=238  Identities=14%  Similarity=0.029  Sum_probs=149.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..|..||||-||.=|++|++.|+..|++|.++.|..+....  .+++.+-.+-     ..-......+.-+|++|...+.
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT--~RIeHlY~nP-----~~h~~~~mkLHYgDmTDss~L~   99 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT--ARIEHLYSNP-----HTHNGASMKLHYGDMTDSSCLI   99 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch--hhhhhhhcCc-----hhcccceeEEeeccccchHHHH
Confidence            45678999999999999999999999999999997653221  1222110000     0011245667779999999898


Q ss_pred             HHhCCC--cEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCC---CEEEEEcCCCccCC-----CCcccccc
Q 009648          159 PALGNA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKF-----GFPAAILN  226 (530)
Q Consensus       159 ~a~~~v--D~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv---~r~V~iSS~~v~~~-----~~~~~~~~  226 (530)
                      +++.-+  +-|+|+|+...  .+..-.++.-+++..|+.+|+++.+..+.   -||-..|+.-.+..     ..+..+.-
T Consensus       100 k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy  179 (376)
T KOG1372|consen  100 KLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY  179 (376)
T ss_pred             HHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC
Confidence            888754  88999988432  22223455567888999999999887632   27888888644221     12334566


Q ss_pred             chhHHHHHHHHHHHHH----HHCCCCEEEEEcCcccCCC---cc-cccccce-------eecc------c-CcccCCCCC
Q 009648          227 LFWGVLLWKRKAEEAL----IASGLPYTIVRPGGMERPT---DA-YKETHNI-------TLSQ------E-DTLFGGQVS  284 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l----~~~gl~~tIvRPg~V~Gp~---~~-~~~~~~~-------~~~~------~-~~~~~g~V~  284 (530)
                      |.++|++.|..+-=++    .++++   .-+-|+++...   .. .+-+..+       .++.      + .....+|-|
T Consensus       180 PRSPYa~aKmy~~WivvNyREAYnm---fAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGh  256 (376)
T KOG1372|consen  180 PRSPYAAAKMYGYWIVVNYREAYNM---FACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGH  256 (376)
T ss_pred             CCChhHHhhhhheEEEEEhHHhhcc---eeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccch
Confidence            7788999986442111    11222   12335554321   11 1111111       1111      1 122346889


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ..|-.++||.+|.++.   -.-|-|..++.-+.++++++.-.-.|
T Consensus       257 A~dYVEAMW~mLQ~d~---PdDfViATge~hsVrEF~~~aF~~ig  298 (376)
T KOG1372|consen  257 AGDYVEAMWLMLQQDS---PDDFVIATGEQHSVREFCNLAFAEIG  298 (376)
T ss_pred             hHHHHHHHHHHHhcCC---CCceEEecCCcccHHHHHHHHHHhhC
Confidence            9999999999999886   45677888877788888777555444

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.94  E-value=7e-09  Score=101.41  Aligned_cols=173  Identities=14%  Similarity=0.106  Sum_probs=125.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +.|.+||||++.+||.+||.+|++..     ..|++.+|+.++.++...++.+.         .....-+++++..|+.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f---------~p~~~i~~~yvlvD~sN   72 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAF---------HPKSTIEVTYVLVDVSN   72 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHh---------CCCceeEEEEEEEehhh
Confidence            35789999999999999999999864     46778899999999988777654         22224578999999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC---------------------------------ccCCCCcchHhHHHHHH
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK---------------------------------EVFDITGPYRIDFQATK  193 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~---------------------------------~~~~~~~~~~vNv~gt~  193 (530)
                      ..++.++.       ...|.|+-|||.+..                                 +..+....|++||.|..
T Consensus        73 m~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhf  152 (341)
T KOG1478|consen   73 MQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHF  152 (341)
T ss_pred             HHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchh
Confidence            87766555       567999999996422                                 12233566999999998


Q ss_pred             HHHHHHHhc----CCCEEEEEcCCCccCCC--Ccc-ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccC
Q 009648          194 NLVDAATIA----KVNHFIMVSSLGTNKFG--FPA-AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMER  259 (530)
Q Consensus       194 ~Ll~aa~~~----gv~r~V~iSS~~v~~~~--~~~-~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~G  259 (530)
                      -|++.....    ....+|++||..+....  .++ ......-+|..+|+..+-+--       ..|+.-.++.||....
T Consensus       153 yli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt  232 (341)
T KOG1478|consen  153 YLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT  232 (341)
T ss_pred             hhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence            888776643    33489999998664332  111 123344569999998874422       2577777789988754


Q ss_pred             C
Q 009648          260 P  260 (530)
Q Consensus       260 p  260 (530)
                      .
T Consensus       233 ~  233 (341)
T KOG1478|consen  233 N  233 (341)
T ss_pred             c
Confidence            3

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.89  E-value=1.1e-07  Score=92.19  Aligned_cols=217  Identities=13%  Similarity=0.154  Sum_probs=139.3

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|++||+|-.  .-|+..+++.|.++|.++.....++ +   +.++++.+.          +..+.-.+++||+++.+
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~---l~krv~~la----------~~~~s~~v~~cDV~~d~   69 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-R---LEKRVEELA----------EELGSDLVLPCDVTNDE   69 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-H---HHHHHHHHH----------hhccCCeEEecCCCCHH
Confidence            578999999964  5799999999999999999988877 3   233333321          01133467899999988


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCccC----------CCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~~~----------~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++..+|       +.+|.|||+.|...++..          .+...+++-...-..|+++|+..  +.+.+|-++=.+..
T Consensus        70 ~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~  149 (259)
T COG0623          70 SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSE  149 (259)
T ss_pred             HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccce
Confidence            877766       568999999997643221          12222344444455566666542  33467766654442


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccc--ccccceeecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~--~~~~~~~~~~~~~~~~g~V~v~D  287 (530)
                      +.      ...+...+..|+..|.-+|       ..|+|++.|--|.|-.--...  .....+............+..+|
T Consensus       150 r~------vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~ee  223 (259)
T COG0623         150 RV------VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEE  223 (259)
T ss_pred             ee------cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHH
Confidence            22      3335578999999997766       268999999888773210000  01111112222333445688999


Q ss_pred             HHHHHHHHHhCCCC-CCCcEEEEeCCCC
Q 009648          288 VAELLACMAKNRSL-SYCKVVEVIAETT  314 (530)
Q Consensus       288 VA~ai~~ll~~~~~-~~g~vynv~~~~~  314 (530)
                      |+...++++.+-.. ..|++.+|.++-+
T Consensus       224 VG~tA~fLlSdLssgiTGei~yVD~G~~  251 (259)
T COG0623         224 VGNTAAFLLSDLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             hhhhHHHHhcchhcccccceEEEcCCce
Confidence            99999999876421 3588888887754

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.88  E-value=1.1e-08  Score=105.92  Aligned_cols=168  Identities=14%  Similarity=0.000  Sum_probs=109.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|+|+|++|.||+.++..|+.+|  .++++++++..+...+  .+.+               ....+...+++|..
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~--Dl~~---------------~~~~~~v~~~td~~   68 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA--DLSH---------------IDTPAKVTGYADGE   68 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc--chhh---------------cCcCceEEEecCCC
Confidence            456699999999999999999998665  6899999932211111  1111               01123345666666


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-------ccccccch
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-------PAAILNLF  228 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-------~~~~~~~~  228 (530)
                      ++.++++++|+||+++|............+..|+..++++++++++++++++|+++|-.+.....       ...-..+.
T Consensus        69 ~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~  148 (321)
T PTZ00325         69 LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR  148 (321)
T ss_pred             chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh
Confidence            67789999999999999765544455677899999999999999999999999999965422110       00111222


Q ss_pred             hHHHHHHHH---HHH-HHHHCCCCEEEEEcCcccCCCcc
Q 009648          229 WGVLLWKRK---AEE-ALIASGLPYTIVRPGGMERPTDA  263 (530)
Q Consensus       229 ~~Y~~sK~~---~E~-~l~~~gl~~tIvRPg~V~Gp~~~  263 (530)
                      ..||.+-..   ... +.+..++...-|+ ++|+|.++.
T Consensus       149 ~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        149 KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence            223333111   112 2234677777777 788887653

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.83  E-value=1.9e-08  Score=105.87  Aligned_cols=99  Identities=19%  Similarity=0.201  Sum_probs=82.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|+|||.|| |+||+.+++.|+++| ++|++.+|+.++.+++....                ..+++.++.|+.|.+.+.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----------------~~~v~~~~vD~~d~~al~   63 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----------------GGKVEALQVDAADVDALV   63 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----------------cccceeEEecccChHHHH
Confidence            468999998 999999999999999 99999999998887764311                148999999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +++++.|+||||+....                ..+++++|.++|+ ++|=+|-
T Consensus        64 ~li~~~d~VIn~~p~~~----------------~~~i~ka~i~~gv-~yvDts~  100 (389)
T COG1748          64 ALIKDFDLVINAAPPFV----------------DLTILKACIKTGV-DYVDTSY  100 (389)
T ss_pred             HHHhcCCEEEEeCCchh----------------hHHHHHHHHHhCC-CEEEccc
Confidence            99999999999987531                3478888888887 6665553

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.70  E-value=2e-07  Score=96.99  Aligned_cols=165  Identities=15%  Similarity=0.073  Sum_probs=101.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-------CeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-------~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl  151 (530)
                      .+|+||||+|+||++++..|+..|       ++|++++|+..  ++......+.                ........|+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~----------------d~~~~~~~~~   66 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ----------------DCAFPLLKSV   66 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh----------------hccccccCCc
Confidence            479999999999999999999854       58999999653  1221100000                0000112344


Q ss_pred             CCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEcCCC-c-----cC--CCCc
Q 009648          152 EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLG-T-----NK--FGFP  221 (530)
Q Consensus       152 ~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iSS~~-v-----~~--~~~~  221 (530)
                      ....++.++++++|+|||+||.......+....++.|+...+.+++...++. .. .+|.+|.-. +     ..  .+.+
T Consensus        67 ~~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~  146 (325)
T cd01336          67 VATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIP  146 (325)
T ss_pred             eecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCC
Confidence            4445677889999999999997655444556778999999999999988873 23 455555410 0     00  0111


Q ss_pred             cccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCc
Q 009648          222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTD  262 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~  262 (530)
                      ... -....+..+.+.-..+.+..++...-|+-..|+|.++
T Consensus       147 ~~~-ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG  186 (325)
T cd01336         147 KEN-FTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHS  186 (325)
T ss_pred             HHH-EEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCC
Confidence            110 1111244444444445555677777777667777654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=98.70  E-value=6.5e-08  Score=100.27  Aligned_cols=119  Identities=17%  Similarity=0.049  Sum_probs=88.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+|+|++|.||..++..|+.+|  .+++++++++.+...+  .+.+               ........++.+.+++
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~--Dl~~---------------~~~~~~i~~~~~~~d~   80 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA--DVSH---------------INTPAQVRGFLGDDQL   80 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc--hhhh---------------CCcCceEEEEeCCCCH
Confidence            3589999999999999999999776  4899999877211111  1110               0111123354444568


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .++++++|+|||+||............+..|+..++++++.+++++.+++|+++|--+
T Consensus        81 ~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv  138 (323)
T PLN00106         81 GDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV  138 (323)
T ss_pred             HHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence            8899999999999997665445567778999999999999999999999999988544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.69  E-value=5.1e-07  Score=94.95  Aligned_cols=163  Identities=12%  Similarity=0.072  Sum_probs=100.2

Q ss_pred             CCCCEEEEECCCcHHHHH--HHHHHHhCCCeEEEEECCchhHH------------HHHHHHHHhhhhccccccCCCCCCC
Q 009648           78 KDDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~--Lv~~Ll~~G~~V~~~~R~~~k~~------------~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ..+|++|||||+++||.+  +++.| +.|++|+++++..+...            .+.+.+++.         |    ..
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~---------G----~~  104 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA---------G----LY  104 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc---------C----Cc
Confidence            456899999999999999  89999 99999999986432211            122222211         1    34


Q ss_pred             eEEEEecCCCHhhHHHHh-------CCCcEEEEcccCCCCccCC---------------CC-----------------cc
Q 009648          144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD---------------IT-----------------GP  184 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~~~~~---------------~~-----------------~~  184 (530)
                      +..+.+|+.+.+++++++       +++|+||||+|.......+               ..                 ..
T Consensus       105 a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~  184 (398)
T PRK13656        105 AKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPA  184 (398)
T ss_pred             eEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeC
Confidence            678899999988776655       5689999999965321100               00                 00


Q ss_pred             ------hHhHHHHHHH---HHHHHHhcC----CCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHHH------
Q 009648          185 ------YRIDFQATKN---LVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIA------  244 (530)
Q Consensus       185 ------~~vNv~gt~~---Ll~aa~~~g----v~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~~------  244 (530)
                            ..+++.|...   -+++....+    ..++|-+|..|....     ..... ...|..|...|..++.      
T Consensus       185 ~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t-----~p~Y~~g~mG~AKa~LE~~~r~La~~L~  259 (398)
T PRK13656        185 TEEEIADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELT-----HPIYWDGTIGKAKKDLDRTALALNEKLA  259 (398)
T ss_pred             CHHHHHHHHHhhccchHHHHHHHHHhcccccCCcEEEEEecCCccee-----ecccCCchHHHHHHHHHHHHHHHHHHhh
Confidence                  1122333311   122333221    236777776654221     11111 2578999999977652      


Q ss_pred             -CCCCEEEEEcCcccC
Q 009648          245 -SGLPYTIVRPGGMER  259 (530)
Q Consensus       245 -~gl~~tIvRPg~V~G  259 (530)
                       .|++++++-.|.+.+
T Consensus       260 ~~giran~i~~g~~~T  275 (398)
T PRK13656        260 AKGGDAYVSVLKAVVT  275 (398)
T ss_pred             hcCCEEEEEecCcccc
Confidence             589999998888754

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.65  E-value=1.5e-07  Score=99.90  Aligned_cols=94  Identities=31%  Similarity=0.456  Sum_probs=71.7

Q ss_pred             EEEECCCcHHHHHHHHHHHhCC-C-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           83 AFVAGATGKVGSRTVRELLKLG-F-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G-~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|| |++|+.+++.|++++ + +|++.+|+.++++.+.+.+               ...+++++++|+.|.+++.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~l~~~   64 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---------------LGDRVEAVQVDVNDPESLAEL   64 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----------------TTTTEEEEE--TTTHHHHHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---------------cccceeEEEEecCCHHHHHHH
Confidence            799999 999999999999997 4 8999999999888765321               136899999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      ++++|+||||+|..                ....++++|.++|+ ++|-
T Consensus        65 ~~~~dvVin~~gp~----------------~~~~v~~~~i~~g~-~yvD   96 (386)
T PF03435_consen   65 LRGCDVVINCAGPF----------------FGEPVARACIEAGV-HYVD   96 (386)
T ss_dssp             HTTSSEEEE-SSGG----------------GHHHHHHHHHHHT--EEEE
T ss_pred             HhcCCEEEECCccc----------------hhHHHHHHHHHhCC-Ceec
Confidence            99999999999864                13456667776665 5655

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.63  E-value=2.1e-07  Score=89.35  Aligned_cols=82  Identities=26%  Similarity=0.242  Sum_probs=68.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+||+|++|+.+++.|++.|++|+++.|+.++.+.+.+.+...              .++.+..+|+.+.+++
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~--------------~~~~~~~~~~~~~~~~   91 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR--------------FGEGVGAVETSDDAAR   91 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh--------------cCCcEEEeeCCCHHHH
Confidence            45689999999999999999999999999999999988877776554321              2345666788898889


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      .+++.++|+||++...
T Consensus        92 ~~~~~~~diVi~at~~  107 (194)
T cd01078          92 AAAIKGADVVFAAGAA  107 (194)
T ss_pred             HHHHhcCCEEEECCCC
Confidence            9999999999998654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.51  E-value=3.6e-07  Score=93.51  Aligned_cols=85  Identities=18%  Similarity=0.345  Sum_probs=70.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHh----CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~----~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      -++|.||+||.|.++++++++    .|...-+..|++.|+++.++.+.+-        .+.. .....++.+|..|++++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k--------~~~~-ls~~~i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEK--------TGTD-LSSSVILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhc--------cCCC-cccceEEEecCCCHHHH
Confidence            489999999999999999999    6889999999999998877655432        1111 23333888999999999


Q ss_pred             HHHhCCCcEEEEcccCCC
Q 009648          158 EPALGNASVVICCIGASE  175 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~  175 (530)
                      .+..+.+.+||||+|...
T Consensus        78 ~emak~~~vivN~vGPyR   95 (423)
T KOG2733|consen   78 DEMAKQARVIVNCVGPYR   95 (423)
T ss_pred             HHHHhhhEEEEeccccce
Confidence            999999999999999754

>PRK05086 malate dehydrogenase; Provisional

Probab=98.50  E-value=6.6e-07  Score=92.59  Aligned_cols=115  Identities=19%  Similarity=0.176  Sum_probs=81.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHh-C--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLK-L--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~-~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+|+|+||+|.||++++..|.. .  ++++++++|++.. ....-.+.           .   ......+.+  .+.+++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~-----------~---~~~~~~i~~--~~~~d~   63 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLS-----------H---IPTAVKIKG--FSGEDP   63 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhh-----------c---CCCCceEEE--eCCCCH
Confidence            5899999999999999998855 2  4788999987532 11100000           0   011122333  223345


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      .+.++++|+||.++|............+..|.....++++++++++.+++|.+.|
T Consensus        64 ~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             HHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            6778899999999997654444455678899999999999999999999998887

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.50  E-value=4.7e-06  Score=82.48  Aligned_cols=74  Identities=19%  Similarity=0.293  Sum_probs=52.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--HhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~sl~~  159 (530)
                      |++=-.+|||||++|+++|+++|++|++++|......                    ....+++++.++..+  .+.+.+
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------------------~~~~~v~~i~v~s~~~m~~~l~~   77 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------------------EPHPNLSIIEIENVDDLLETLEP   77 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------------------CCCCCeEEEEEecHHHHHHHHHH
Confidence            3433367899999999999999999999998642100                    012467777655433  245667


Q ss_pred             HhCCCcEEEEcccCCC
Q 009648          160 ALGNASVVICCIGASE  175 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~  175 (530)
                      .++++|+||||||...
T Consensus        78 ~~~~~DivIh~AAvsd   93 (229)
T PRK06732         78 LVKDHDVLIHSMAVSD   93 (229)
T ss_pred             HhcCCCEEEeCCccCC
Confidence            7789999999999754

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.41  E-value=2.7e-06  Score=77.89  Aligned_cols=115  Identities=17%  Similarity=0.135  Sum_probs=83.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+||+|.+|.+++..|+..|  .+++++++++++++.....+.+....         ....+.+..+   +    .
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~---------~~~~~~i~~~---~----~   64 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP---------LPSPVRITSG---D----Y   64 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG---------STEEEEEEES---S----G
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh---------cccccccccc---c----c
Confidence            589999999999999999999987  58999999988877776666554111         0012233322   2    3


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      +.++++|+||.+||.......+....++.|....+.+++...+.+.+ .||.+|
T Consensus        65 ~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   65 EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            45779999999999765555555667889999999999999988654 344443

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.37  E-value=8.8e-07  Score=87.65  Aligned_cols=185  Identities=12%  Similarity=0.048  Sum_probs=99.8

Q ss_pred             CCCEEEEECCC----------------cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCC
Q 009648           79 DDNLAFVAGAT----------------GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE  142 (530)
Q Consensus        79 ~~k~VLVTGAt----------------G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~  142 (530)
                      .+++||||+|.                ||+|++|+++|+++|++|+++++.......                 ......
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-----------------~~~~~~   64 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-----------------DINNQL   64 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-----------------ccCCce
Confidence            47899999886                999999999999999999999864321000                 000012


Q ss_pred             CeEEEEecCCCHhhHHHHhC--CCcEEEEcccCCCCccCCC----------------CcchHhHHHHHHHHHHHHHhcCC
Q 009648          143 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKEVFDI----------------TGPYRIDFQATKNLVDAATIAKV  204 (530)
Q Consensus       143 ~v~~v~~Dl~d~~sl~~a~~--~vD~VI~~Ag~~~~~~~~~----------------~~~~~vNv~gt~~Ll~aa~~~gv  204 (530)
                      .+..+.+|....+.+.+++.  ++|+|||+|+..++.....                ...+.+.+.-+-.++..+++..-
T Consensus        65 ~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~  144 (229)
T PRK09620         65 ELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDP  144 (229)
T ss_pred             eEEEEecHHHHHHHHHHHhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCC
Confidence            34455664444467778884  6899999999654332110                01111223334455666654332


Q ss_pred             CEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHHCCCCEEEEEcC-cccCCCcccccccceeecccCcccCCCC
Q 009648          205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG-GMERPTDAYKETHNITLSQEDTLFGGQV  283 (530)
Q Consensus       205 ~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg-~V~Gp~~~~~~~~~~~~~~~~~~~~g~V  283 (530)
                      +.+ .|+-..- . +.         .+-.--..+.+.++..++.+++...- ..+|..     ...+++...+... ...
T Consensus       145 ~~~-~vGFkaE-t-~~---------~~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~-----~~~~ii~~~~~~~-~~~  206 (229)
T PRK09620        145 ETV-LVGFKLE-S-DV---------NEEELFERAKNRMEEAKASVMIANSPHSLYSRG-----AMHYVIGQDGKGQ-LCN  206 (229)
T ss_pred             CCE-EEEEEec-c-CC---------CHHHHHHHHHHHHHHcCCCEEEECCcccccCCC-----cEEEEEeCCCccc-cCC
Confidence            222 2221111 0 00         00111223444556688898876542 222221     1233343333222 335


Q ss_pred             CHHHHHHHHHHHHhC
Q 009648          284 SNLQVAELLACMAKN  298 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~  298 (530)
                      +-.++|+.|+..+.+
T Consensus       207 ~K~~iA~~i~~~i~~  221 (229)
T PRK09620        207 GKDETAKEIVKRLEV  221 (229)
T ss_pred             CHHHHHHHHHHHHHH
Confidence            678899888887654

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.34  E-value=2.3e-06  Score=86.00  Aligned_cols=96  Identities=11%  Similarity=0.086  Sum_probs=72.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||+||||. |+.|++.|.++||+|++.+|+......+..                  .+... +..+..|.+++.+.
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~------------------~g~~~-v~~g~l~~~~l~~~   60 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI------------------HQALT-VHTGALDPQELREF   60 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc------------------cCCce-EEECCCCHHHHHHH
Confidence            57999999999 999999999999999999999865443211                  12233 44566677778888


Q ss_pred             hC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          161 LG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      +.  ++|+||+++..+.             ...+.|+.++|++.|+..+=|
T Consensus        61 l~~~~i~~VIDAtHPfA-------------~~is~~a~~a~~~~~ipylR~   98 (256)
T TIGR00715        61 LKRHSIDILVDATHPFA-------------AQITTNATAVCKELGIPYVRF   98 (256)
T ss_pred             HHhcCCCEEEEcCCHHH-------------HHHHHHHHHHHHHhCCcEEEE
Confidence            84  5999999986431             356899999999999864444

This enzyme was found to be a monomer by gel filtration.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.27  E-value=4.1e-06  Score=85.75  Aligned_cols=82  Identities=16%  Similarity=0.141  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCc---hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~---~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .++++|+|+|| |++|++++..|++.|++ |+++.|+.   ++.+.+.+++...             ...+.+..+|+.+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-------------~~~~~~~~~d~~~  189 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-------------VPECIVNVYDLND  189 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-------------CCCceeEEechhh
Confidence            45689999998 89999999999999985 99999997   5666655544321             1345566789988


Q ss_pred             HhhHHHHhCCCcEEEEcccC
Q 009648          154 RVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~  173 (530)
                      .+++...++.+|+||||...
T Consensus       190 ~~~~~~~~~~~DilINaTp~  209 (289)
T PRK12548        190 TEKLKAEIASSDILVNATLV  209 (289)
T ss_pred             hhHHHhhhccCCEEEEeCCC
Confidence            88888888899999999753

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.25  E-value=1.8e-05  Score=84.55  Aligned_cols=180  Identities=13%  Similarity=0.106  Sum_probs=102.1

Q ss_pred             CCCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      ..+++||||||                +|++|.+++++|+++|++|++++++.. ...                     .
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~---------------------~  243 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT---------------------P  243 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC---------------------C
Confidence            56889999999                899999999999999999999998752 110                     1


Q ss_pred             CCeEEEEecCCCHhhHHHHh----CCCcEEEEcccCCCCccCCC--------CcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          142 EMLELVECDLEKRVQIEPAL----GNASVVICCIGASEKEVFDI--------TGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~~a~----~~vD~VI~~Ag~~~~~~~~~--------~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      .+  +..+|+++.+++.+++    +.+|++|||||..+......        ...+.+.+.-+..++..+.+...++-+.
T Consensus       244 ~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~  321 (399)
T PRK05579        244 AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFV  321 (399)
T ss_pred             CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEE
Confidence            12  3457999877766554    57899999999653322110        0011122233445666666543222122


Q ss_pred             EcCCCccCCCCccccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCc-ccCCCCCHHHH
Q 009648          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT-LFGGQVSNLQV  288 (530)
Q Consensus       210 iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~-~~~g~V~v~DV  288 (530)
                      |+-..-      .   +      .....+.+-+.+.++.+++...=. .+-+-.........+...+. ......+-.++
T Consensus       322 VGFaaE------t---~------~~~~~A~~kl~~k~~D~ivaN~i~-~~~~fg~~~n~~~ii~~~~~~~~~~~~~K~~i  385 (399)
T PRK05579        322 VGFAAE------T---G------DVLEYARAKLKRKGLDLIVANDVS-AGGGFGSDDNEVTLIWSDGGEVKLPLMSKLEL  385 (399)
T ss_pred             EEEccC------C---c------hHHHHHHHHHHHcCCeEEEEecCC-cCCCcCCCceEEEEEECCCcEEEcCCCCHHHH
Confidence            332111      0   0      012233444566889998776521 11111111222233333322 12233567899


Q ss_pred             HHHHHHHHh
Q 009648          289 AELLACMAK  297 (530)
Q Consensus       289 A~ai~~ll~  297 (530)
                      |+.|+..+.
T Consensus       386 A~~i~~~i~  394 (399)
T PRK05579        386 ARRLLDEIA  394 (399)
T ss_pred             HHHHHHHHH
Confidence            999988764

>cd00704 MDH Malate dehydrogenase

Probab=98.21  E-value=9e-06  Score=84.54  Aligned_cols=103  Identities=15%  Similarity=0.117  Sum_probs=76.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC-------CeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G-------~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +|+|+||+|+||+.++..|+..|       ++++++++++  ++....                           ..|+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~---------------------------~~Dl~   54 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV---------------------------VMELQ   54 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee---------------------------eeehh
Confidence            69999999999999999999866       2599999987  432221                           22222


Q ss_pred             CH-----------hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 009648          153 KR-----------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (530)
Q Consensus       153 d~-----------~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iS  211 (530)
                      |.           ....++++++|+|||+||.......+....+..|+...+.+++.+++++ .. .+|.+|
T Consensus        55 d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          55 DCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             hhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            22           2356788999999999997665555556678899999999999998883 44 445554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.17  E-value=1.2e-05  Score=83.63  Aligned_cols=105  Identities=16%  Similarity=0.095  Sum_probs=76.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +|+|+||+|.||..++..|+..|.       +++++++++...                         ..+....|+.|.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------------------~a~g~~~Dl~d~   55 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------------------VLEGVVMELMDC   55 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------------------ccceeEeehhcc
Confidence            589999999999999999988653       699999865420                         111222333332


Q ss_pred             h-----------hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 009648          155 V-----------QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (530)
Q Consensus       155 ~-----------sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iS  211 (530)
                      .           ...+.++++|+||++||.......+....++.|+...+.+++...+++ .. .+|.+|
T Consensus        56 ~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        56 AFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             cchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence            2           345788999999999997655444566778999999999999999884 44 455555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.11  E-value=8.7e-06  Score=82.95  Aligned_cols=78  Identities=23%  Similarity=0.285  Sum_probs=65.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ....++|-||+||.|..++++|+++|.+-.+..|+..++..+..++                  +.++..+++.+++.+.
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L------------------G~~~~~~p~~~p~~~~   66 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL------------------GPEAAVFPLGVPAALE   66 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc------------------CccccccCCCCHHHHH
Confidence            3456999999999999999999999999999999999988876532                  2344446666688999


Q ss_pred             HHhCCCcEEEEcccCC
Q 009648          159 PALGNASVVICCIGAS  174 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~  174 (530)
                      +...++++|+||+|..
T Consensus        67 ~~~~~~~VVlncvGPy   82 (382)
T COG3268          67 AMASRTQVVLNCVGPY   82 (382)
T ss_pred             HHHhcceEEEeccccc
Confidence            9999999999999964

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.08  E-value=3.6e-05  Score=80.07  Aligned_cols=167  Identities=11%  Similarity=0.010  Sum_probs=105.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      .++|.|+||+|+||..++..|+..|.       +++++++++..  +......+.+.        .... ..++++..  
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~--------~~~~-~~~~~i~~--   70 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDC--------AFPL-LAEIVITD--   70 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhc--------cccc-cCceEEec--
Confidence            45899999999999999999998874       79999985432  33332222211        0000 11233221  


Q ss_pred             CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCC-C-EEEEEcCCC-ccCC-CCccc-cc
Q 009648          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVSSLG-TNKF-GFPAA-IL  225 (530)
Q Consensus       151 l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~-r~V~iSS~~-v~~~-~~~~~-~~  225 (530)
                           ...+.++++|+||.+||.......+-...++.|+...+.+++...+++. . .+|.+|.-. +..+ -.... -+
T Consensus        71 -----~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~  145 (322)
T cd01338          71 -----DPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDI  145 (322)
T ss_pred             -----CcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCC
Confidence                 1246688999999999976555445566789999999999999998763 4 455555310 0000 00000 02


Q ss_pred             cchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCc
Q 009648          226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD  262 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~  262 (530)
                      .....|+.++...+++..    ..|++...+|..+|||+++
T Consensus       146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG  186 (322)
T cd01338         146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS  186 (322)
T ss_pred             ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence            223356666766665543    4789989999989999874

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.06  E-value=1.3e-05  Score=83.64  Aligned_cols=73  Identities=25%  Similarity=0.272  Sum_probs=56.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhC-C-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKL-G-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...+++|+||||+|+||+.+++.|+++ | .+|+++.|+..++..+.+++                      ..+|+.  
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el----------------------~~~~i~--  207 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL----------------------GGGKIL--  207 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh----------------------ccccHH--
Confidence            356789999999999999999999865 5 69999999987776654321                      113333  


Q ss_pred             hhHHHHhCCCcEEEEcccCC
Q 009648          155 VQIEPALGNASVVICCIGAS  174 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~  174 (530)
                       .+.+++.++|+|||+++..
T Consensus       208 -~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        208 -SLEEALPEADIVVWVASMP  226 (340)
T ss_pred             -hHHHHHccCCEEEECCcCC
Confidence             3668889999999999864

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.06  E-value=8.9e-05  Score=76.90  Aligned_cols=117  Identities=18%  Similarity=0.192  Sum_probs=84.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .+.+++|.|+|+ |.||..++..|+..|.  ++.+++++.+++......+.+..         ... .++.+...|    
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~---------~~~-~~~~i~~~~----   67 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAV---------PFT-SPTKIYAGD----   67 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhc---------ccc-CCeEEEeCC----
Confidence            456789999997 9999999999999985  89999999988777665555430         011 233333222    


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r-~V~iS  211 (530)
                        . +.++++|+||.+||.......+....+..|....+.+++.+++.+.+- +|.+|
T Consensus        68 --~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         68 --Y-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             --H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence              2 347899999999997655444455678889999999999999876554 44444

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.06  E-value=5.3e-05  Score=78.18  Aligned_cols=114  Identities=17%  Similarity=0.151  Sum_probs=82.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.|.|+ |.+|+.++..|+..|  ++|++++|+.++.+.+...+.+..         ......+.+...   +   . 
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~---------~~~~~~~~i~~~---~---~-   63 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDAL---------AFLPSPVKIKAG---D---Y-   63 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHh---------hccCCCeEEEcC---C---H-
Confidence            37999995 999999999999999  699999999988877766554431         000122333322   2   2 


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      +.++++|+||+++|.......+-...+..|....+.+++.+++++.. .||.+|
T Consensus        64 ~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          64 SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            24689999999999765544455567888999999999999988654 445554

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.06  E-value=5.9e-05  Score=80.34  Aligned_cols=176  Identities=14%  Similarity=0.088  Sum_probs=105.1

Q ss_pred             CCCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      ..+++||||||                +|.+|.+++++|..+|++|+++.+.....                      ..
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------------------~~  240 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------------------TP  240 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------------------CC
Confidence            56889999999                46799999999999999999988765321                      01


Q ss_pred             CCeEEEEecCCCHhhH-HHHh----CCCcEEEEcccCCCCccCC--------CCcchHhHHHHHHHHHHHHHhcCCCEEE
Q 009648          142 EMLELVECDLEKRVQI-EPAL----GNASVVICCIGASEKEVFD--------ITGPYRIDFQATKNLVDAATIAKVNHFI  208 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl-~~a~----~~vD~VI~~Ag~~~~~~~~--------~~~~~~vNv~gt~~Ll~aa~~~gv~r~V  208 (530)
                      ..+  ..+|+.+.+++ +.++    .++|++|||||..+.....        ....+.+|+.-+..+++..++...++| 
T Consensus       241 ~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~-  317 (390)
T TIGR00521       241 PGV--KSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQV-  317 (390)
T ss_pred             CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcE-
Confidence            222  45788887776 4333    5689999999975432211        112244566667777877776533333 


Q ss_pred             EEcCCCccCCCCccccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCc--ccCCCcccccccceeecccCcccCCCCCHH
Q 009648          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG--MERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       209 ~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~--V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~  286 (530)
                      .++-..-    ..    +  .    ....+.+-+++.++.+++...-.  -+|..    ....+.+...+.......+-.
T Consensus       318 lvgF~aE----t~----~--~----l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~----~n~~~li~~~~~~~~~~~~K~  379 (390)
T TIGR00521       318 IVGFKAE----TN----D--D----LIKYAKEKLKKKNLDMIVANDVSQRGFGSD----ENEVYIFSKHGHKELPLMSKL  379 (390)
T ss_pred             EEEEEcC----CC----c--H----HHHHHHHHHHHcCCCEEEEccCCccccCCC----CcEEEEEECCCeEEeCCCCHH
Confidence            3332111    00    0  0    23345555667899999776421  12221    122333333322222335678


Q ss_pred             HHHHHHHHHH
Q 009648          287 QVAELLACMA  296 (530)
Q Consensus       287 DVA~ai~~ll  296 (530)
                      ++|+.|+..+
T Consensus       380 ~iA~~i~~~~  389 (390)
T TIGR00521       380 EVAERILDEI  389 (390)
T ss_pred             HHHHHHHHHh
Confidence            9999988765

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.95  E-value=7e-05  Score=81.12  Aligned_cols=76  Identities=20%  Similarity=0.208  Sum_probs=56.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++++|+|+|+++ +|..+++.|+++|++|++++++. +......+++..               .++.++.+|..+   
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~~---   63 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE---------------LGIELVLGEYPE---   63 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---------------cCCEEEeCCcch---
Confidence            3568999999877 99999999999999999999975 333322222221               246778888766   


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                        ..++++|+||+++|..
T Consensus        64 --~~~~~~d~vv~~~g~~   79 (450)
T PRK14106         64 --EFLEGVDLVVVSPGVP   79 (450)
T ss_pred             --hHhhcCCEEEECCCCC
Confidence              3457899999999864

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.93  E-value=2.5e-05  Score=82.90  Aligned_cols=100  Identities=19%  Similarity=0.324  Sum_probs=67.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++++|.|.||||++|+.|++.|.++ +++|+.+.++.+..+.+..                   ....+..+|+.+.+.+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~-------------------~~~~l~~~~~~~~~~~   97 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS-------------------VFPHLITQDLPNLVAV   97 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh-------------------hCccccCccccceecC
Confidence            5679999999999999999999999 6899999986543222111                   1112222444333333


Q ss_pred             HH-HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          158 EP-ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~~-a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .. .++++|+||.+.+..                ...+++.++ +.| .++|-+|+..-
T Consensus        98 ~~~~~~~~DvVf~Alp~~----------------~s~~i~~~~-~~g-~~VIDlSs~fR  138 (381)
T PLN02968         98 KDADFSDVDAVFCCLPHG----------------TTQEIIKAL-PKD-LKIVDLSADFR  138 (381)
T ss_pred             CHHHhcCCCEEEEcCCHH----------------HHHHHHHHH-hCC-CEEEEcCchhc
Confidence            32 268999999987641                467777776 355 48999998754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.91  E-value=2.2e-05  Score=71.30  Aligned_cols=77  Identities=25%  Similarity=0.301  Sum_probs=59.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+++|+|.|+ |++|+.++.+|.+.|.+ |+++.|+.++.+.+.+.+.               ...+.++..     +
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---------------~~~~~~~~~-----~   67 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---------------GVNIEAIPL-----E   67 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---------------GCSEEEEEG-----G
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---------------ccccceeeH-----H
Confidence            356789999995 88999999999999975 9999999999888876541               134555543     3


Q ss_pred             hHHHHhCCCcEEEEcccCC
Q 009648          156 QIEPALGNASVVICCIGAS  174 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~  174 (530)
                      ++...+..+|+|||+.+..
T Consensus        68 ~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   68 DLEEALQEADIVINATPSG   86 (135)
T ss_dssp             GHCHHHHTESEEEE-SSTT
T ss_pred             HHHHHHhhCCeEEEecCCC
Confidence            3557788999999998754

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.91  E-value=0.00011  Score=72.53  Aligned_cols=75  Identities=25%  Similarity=0.318  Sum_probs=63.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+++|.| .|.+|+.+++.|.++||+|+++++++++......                 ....++.+.+|-+|.+.++++
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~-----------------~~~~~~~v~gd~t~~~~L~~a   62 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLA-----------------DELDTHVVIGDATDEDVLEEA   62 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh-----------------hhcceEEEEecCCCHHHHHhc
Confidence            5788888 7889999999999999999999999987665321                 014678899999999999988


Q ss_pred             -hCCCcEEEEcccC
Q 009648          161 -LGNASVVICCIGA  173 (530)
Q Consensus       161 -~~~vD~VI~~Ag~  173 (530)
                       +.++|+||-+.|.
T Consensus        63 gi~~aD~vva~t~~   76 (225)
T COG0569          63 GIDDADAVVAATGN   76 (225)
T ss_pred             CCCcCCEEEEeeCC
Confidence             7899999999764

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.91  E-value=4e-05  Score=79.28  Aligned_cols=117  Identities=16%  Similarity=0.166  Sum_probs=75.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+|.|+|++|++|..++..|+..|+  +|++++|+.  +++......+.+..         ........+...  .|   
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~---------~~~~~~~~i~~~--~d---   66 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDAL---------AAAGIDAEIKIS--SD---   66 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhch---------hccCCCcEEEEC--CC---
Confidence            5899999999999999999999986  599999954  33332221111100         000011111111  12   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      . ..++++|+||.++|.......+....++.|+...+.+++.+.+.+.. .||.+++
T Consensus        67 ~-~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          67 L-SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            2 34899999999999754433333556788899999999988877444 5666665

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.82  E-value=0.00028  Score=73.89  Aligned_cols=108  Identities=14%  Similarity=0.274  Sum_probs=75.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc---------------------hhHHHHHHHHHHhhhhccccc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN  135 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~---------------------~k~~~l~~~~~~~~l~~~~~~  135 (530)
                      .+.++|+|.| .|.+|+++++.|++.|+ ++++++++.                     .|...+.+.++++        
T Consensus        22 L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i--------   92 (338)
T PRK12475         22 IREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI--------   92 (338)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH--------
Confidence            5567899999 57799999999999996 888898864                     2444445555544        


Q ss_pred             cCCCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       136 ~g~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                         ...-.++.+..|++ .+.+.++++++|+||.+...               ...-..+-++|.+.++ .+|+.+..+
T Consensus        93 ---np~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~---------------~~~r~~in~~~~~~~i-p~i~~~~~g  151 (338)
T PRK12475         93 ---NSEVEIVPVVTDVT-VEELEELVKEVDLIIDATDN---------------FDTRLLINDLSQKYNI-PWIYGGCVG  151 (338)
T ss_pred             ---CCCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence               12234566667775 35678889999999999631               2222335567778876 677766544

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.81  E-value=0.00027  Score=68.57  Aligned_cols=108  Identities=16%  Similarity=0.222  Sum_probs=73.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|.+|.++++.|++.|. ++++++++.                   .|...+.+.++++          
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~----------   87 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL----------   87 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh----------
Confidence            4567899999 78899999999999995 899999872                   3444444554443          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.-+++.+..++. .+.+.+.++++|+||.|...               ...-..+-+.|+++++ .||+.+..+
T Consensus        88 -np~v~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d~---------------~~~r~~l~~~~~~~~i-p~i~~~~~g  146 (202)
T TIGR02356        88 -NSDIQVTALKERVT-AENLELLINNVDLVLDCTDN---------------FATRYLINDACVALGT-PLISAAVVG  146 (202)
T ss_pred             -CCCCEEEEehhcCC-HHHHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence             11123344444443 35577888999999999632               2333456678888886 688876544

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.81  E-value=0.00016  Score=75.21  Aligned_cols=116  Identities=10%  Similarity=0.025  Sum_probs=80.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      ..+|.|+||+|+||..++..|+..|.       +++++++++  +++......+.+..        . ....++.+..  
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~--------~-~~~~~~~i~~--   71 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA--------F-PLLAGVVATT--   71 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc--------c-cccCCcEEec--
Confidence            45899999999999999999998883       799999865  33444433333220        0 0011222221  


Q ss_pred             CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCC-C-EEEEEc
Q 009648          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVS  211 (530)
Q Consensus       151 l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~-r~V~iS  211 (530)
                           ...+.++++|+||.+||.......+....+..|....+.+++.+.+++- . .||.+|
T Consensus        72 -----~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        72 -----DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             -----ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence                 2346688999999999986655555566789999999999999998864 4 455554

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.80  E-value=4.8e-05  Score=75.21  Aligned_cols=69  Identities=13%  Similarity=0.164  Sum_probs=47.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH-
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA-  160 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a-  160 (530)
                      |.+=-.++|+||++++++|+++|++|++++|...    +.                    . .....+|+.+.+++.++ 
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l~--------------------~-~~~~~~Dv~d~~s~~~l~   71 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA----LK--------------------P-EPHPNLSIREIETTKDLL   71 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh----cc--------------------c-ccCCcceeecHHHHHHHH
Confidence            3433455999999999999999999999876321    00                    0 00134688776665544 


Q ss_pred             ------hCCCcEEEEcccCCC
Q 009648          161 ------LGNASVVICCIGASE  175 (530)
Q Consensus       161 ------~~~vD~VI~~Ag~~~  175 (530)
                            ++++|++|||||...
T Consensus        72 ~~v~~~~g~iDiLVnnAgv~d   92 (227)
T TIGR02114        72 ITLKELVQEHDILIHSMAVSD   92 (227)
T ss_pred             HHHHHHcCCCCEEEECCEecc
Confidence                  357899999999643

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.79  E-value=0.00012  Score=85.99  Aligned_cols=78  Identities=22%  Similarity=0.274  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-Ce-------------EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FR-------------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~-------------V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ..+++|+|+|| |+||+.+++.|++.+ ++             |.+.+++.++++++.+.                 .++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-----------------~~~  628 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-----------------IEN  628 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-----------------cCC
Confidence            34679999995 999999999999763 34             88888888777665431                 136


Q ss_pred             eEEEEecCCCHhhHHHHhCCCcEEEEcccC
Q 009648          144 LELVECDLEKRVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~  173 (530)
                      ++.+..|+.|.+++.++++++|+||+|...
T Consensus       629 ~~~v~lDv~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        629 AEAVQLDVSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             CceEEeecCCHHHHHHhhcCCCEEEECCCc
Confidence            788999999999999999999999999864

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.78  E-value=0.0001  Score=77.11  Aligned_cols=93  Identities=25%  Similarity=0.240  Sum_probs=62.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+|.||||++|++|++.|.++||   +++++.|..+..+.+.                   ..+.++...|+.+.  
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-------------------~~g~~i~v~d~~~~--   59 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-------------------FKGKELKVEDLTTF--   59 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-------------------eCCceeEEeeCCHH--
Confidence            36899999999999999999999886   4588887654322210                   01234454566432  


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                         .++++|+||.|+|..                .+..++..+.++|+ .+|=.|+.
T Consensus        60 ---~~~~vDvVf~A~g~g----------------~s~~~~~~~~~~G~-~VIDlS~~   96 (334)
T PRK14874         60 ---DFSGVDIALFSAGGS----------------VSKKYAPKAAAAGA-VVIDNSSA   96 (334)
T ss_pred             ---HHcCCCEEEECCChH----------------HHHHHHHHHHhCCC-EEEECCch
Confidence               346899999998742                25556666666776 56666664

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.77  E-value=0.00014  Score=73.39  Aligned_cols=114  Identities=18%  Similarity=0.153  Sum_probs=80.2

Q ss_pred             EEEECCCcHHHHHHHHHHHhCC----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           83 AFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |.|+||+|.+|..++..|+..|    .+|++++++++++......++++.        .  .....++..     ..++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~--------~--~~~~~~i~~-----~~d~~   65 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAV--------E--PLADIKVSI-----TDDPY   65 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhh--------h--hccCcEEEE-----CCchH
Confidence            5799999999999999999998    799999999888777666555431        0  000112211     12356


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++++|+||.++|...............|+...+.+++.+++.+.+ .+|.+|
T Consensus        66 ~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          66 EAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            77899999999998765543333445677888889999999887544 444444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.76  E-value=0.00017  Score=75.02  Aligned_cols=118  Identities=16%  Similarity=0.136  Sum_probs=78.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.++|.|+|| |.+|..++..|+..| .+|+++++++++.....-.+...         .........+. +    ..++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~---------~~~~~~~~~i~-~----~~d~   68 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF---------STLVGSNINIL-G----TNNY   68 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh---------ccccCCCeEEE-e----CCCH
Confidence            4568999996 999999999999888 79999999887654322111111         00000112222 1    1224


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE-EEEEcC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVSS  212 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r-~V~iSS  212 (530)
                      + +++++|+||.++|.......+....+..|....+.+++.+.+.+.+. +|++|.
T Consensus        69 ~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         69 E-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             H-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            4 67999999999987655444445567788888888899888876554 666654

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.76  E-value=0.00024  Score=76.57  Aligned_cols=118  Identities=15%  Similarity=0.043  Sum_probs=84.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-------CC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-------GF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-------G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      .+.-+|.|+|++|.||.+++..|+..       |.  ++++++++++++......+++..        ... ..++.+..
T Consensus        98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa--------~~~-~~~v~i~~  168 (444)
T PLN00112         98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSL--------YPL-LREVSIGI  168 (444)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhh--------hhh-cCceEEec
Confidence            34568999999999999999999988       64  89999999998877665555431        000 11233222


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh-cCCC-EEEEEc
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVN-HFIMVS  211 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~-~gv~-r~V~iS  211 (530)
                      +|       -+.++++|+||..||.......+-...++.|....+.+.+...+ ++.. .||.+|
T Consensus       169 ~~-------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        169 DP-------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             CC-------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence            22       35678999999999976555455566789999999999999998 4544 445555

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.76  E-value=0.00027  Score=76.52  Aligned_cols=73  Identities=18%  Similarity=0.112  Sum_probs=62.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++|+.++.+.+.+                  ..+++++.+|..+...+.++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~------------------~~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD------------------RLDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh------------------hcCEEEEEeCCCCHHHHHHc
Confidence            57999996 999999999999999999999999887665432                  13688999999999988888


Q ss_pred             -hCCCcEEEEccc
Q 009648          161 -LGNASVVICCIG  172 (530)
Q Consensus       161 -~~~vD~VI~~Ag  172 (530)
                       ++++|+||.+..
T Consensus        62 ~~~~a~~vi~~~~   74 (453)
T PRK09496         62 GAEDADLLIAVTD   74 (453)
T ss_pred             CCCcCCEEEEecC
Confidence             889999999864

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.75  E-value=0.00039  Score=72.88  Aligned_cols=109  Identities=17%  Similarity=0.289  Sum_probs=75.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc---------------------hhHHHHHHHHHHhhhhccccc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN  135 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~---------------------~k~~~l~~~~~~~~l~~~~~~  135 (530)
                      ....+|+|.|+ |+||+.++..|++.|. +|++++++.                     .|...+.+.++++        
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i--------   92 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI--------   92 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH--------
Confidence            45678999995 8899999999999996 999999863                     2334444444433        


Q ss_pred             cCCCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       136 ~g~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                         ...-.++.+..+++. +.+.++++++|+||.|..               |...-..+-++|.+.++ .+|+.+..+.
T Consensus        93 ---np~v~v~~~~~~~~~-~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~  152 (339)
T PRK07688         93 ---NSDVRVEAIVQDVTA-EELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKYGI-PWIYGACVGS  152 (339)
T ss_pred             ---CCCcEEEEEeccCCH-HHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHhCC-CEEEEeeeee
Confidence               112345666667653 557778999999999953               23334456778888886 6888776543

>PRK05442 malate dehydrogenase; Provisional

Probab=97.74  E-value=0.00022  Score=74.26  Aligned_cols=119  Identities=11%  Similarity=0.024  Sum_probs=80.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      .+.++|.|+|++|.||..++..|+..|.       ++.++++++.  ++......+.+..        ... ..++.+..
T Consensus         2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~--------~~~-~~~~~i~~   72 (326)
T PRK05442          2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCA--------FPL-LAGVVITD   72 (326)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhh--------hhh-cCCcEEec
Confidence            4567999999999999999999988762       7999998543  3333322222210        000 11233221


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcC
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSS  212 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS  212 (530)
                             ...+.++++|+||.+||.......+....++.|....+.+++...++.  -..+|.+|.
T Consensus        73 -------~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         73 -------DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             -------ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                   124668899999999997665555556678999999999999999853  335666664

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.71  E-value=0.00098  Score=58.12  Aligned_cols=70  Identities=24%  Similarity=0.327  Sum_probs=57.6

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH-h
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA-L  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a-~  161 (530)
                      |+|.|. |.+|+.+++.|.+.+++|++++++++....+.+                   .++.++.||..|.+.++++ +
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-------------------~~~~~i~gd~~~~~~l~~a~i   60 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-------------------EGVEVIYGDATDPEVLERAGI   60 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-------------------TTSEEEES-TTSHHHHHHTTG
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-------------------cccccccccchhhhHHhhcCc
Confidence            678885 789999999999977899999999988776543                   4588999999999988764 4


Q ss_pred             CCCcEEEEccc
Q 009648          162 GNASVVICCIG  172 (530)
Q Consensus       162 ~~vD~VI~~Ag  172 (530)
                      ++++.||.+..
T Consensus        61 ~~a~~vv~~~~   71 (116)
T PF02254_consen   61 EKADAVVILTD   71 (116)
T ss_dssp             GCESEEEEESS
T ss_pred             cccCEEEEccC
Confidence            78999999865

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.70  E-value=0.00072  Score=61.06  Aligned_cols=106  Identities=21%  Similarity=0.338  Sum_probs=74.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC-------------------chhHHHHHHHHHHhhhhccccccCCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKGIQ  139 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~-------------------~~k~~~l~~~~~~~~l~~~~~~~g~~  139 (530)
                      .++|+|.| .|.+|+.+++.|++.|. ++++++.+                   ..|.+.+.+.++++           .
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-----------n   69 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI-----------N   69 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH-----------S
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh-----------c
Confidence            46899999 67799999999999996 78888763                   23455555555544           1


Q ss_pred             CCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          140 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       140 ~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +.-+++.+..++ +.+.+.+.++++|+||+|...               ...-..+.+.|++.+. .||+.+..+
T Consensus        70 p~~~v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~---------------~~~~~~l~~~~~~~~~-p~i~~~~~g  127 (135)
T PF00899_consen   70 PDVEVEAIPEKI-DEENIEELLKDYDIVIDCVDS---------------LAARLLLNEICREYGI-PFIDAGVNG  127 (135)
T ss_dssp             TTSEEEEEESHC-SHHHHHHHHHTSSEEEEESSS---------------HHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred             Cceeeeeeeccc-ccccccccccCCCEEEEecCC---------------HHHHHHHHHHHHHcCC-CEEEEEeec
Confidence            223556666666 456678888999999999542               3345567778888886 788877654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.68  E-value=0.00031  Score=73.11  Aligned_cols=119  Identities=8%  Similarity=0.085  Sum_probs=78.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~  154 (530)
                      |.+.++|.|+| +|.+|..++..|+..|. +|+++++++++.....-.+...         .........+.. .|    
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~---------~~~~~~~~~I~~~~d----   68 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHS---------NVIAGSNSKVIGTNN----   68 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhh---------hhccCCCeEEEECCC----
Confidence            45567999999 69999999999999994 9999999987643221111111         000111223332 22    


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccC-----CCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~-----~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                        + ++++++|+||+++|.......     +....+..|+...+.+++.+.+.+.+ .+|.+|.
T Consensus        69 --~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         69 --Y-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             --H-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence              3 367899999999987543322     22345677888888888888887655 5666664

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.68  E-value=0.00061  Score=63.69  Aligned_cols=112  Identities=27%  Similarity=0.275  Sum_probs=71.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|.|.| .|-+|+.+++.|+++||+|++.+|+.++.+.+.+                   .+++.+       ++..+
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~~-------~s~~e   53 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-------------------AGAEVA-------DSPAE   53 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-------------------TTEEEE-------SSHHH
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-------------------hhhhhh-------hhhhh
Confidence            46899999 6999999999999999999999999988887654                   222222       35677


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHH---HHhcCCC-EEEEEcCCCccCCCCccccccchhHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDA---ATIAKVN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~a---a~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK  235 (530)
                      +++++|+||-|...               ...+..++..   +.....+ -||.+||..                 -..+
T Consensus        54 ~~~~~dvvi~~v~~---------------~~~v~~v~~~~~i~~~l~~g~iiid~sT~~-----------------p~~~  101 (163)
T PF03446_consen   54 AAEQADVVILCVPD---------------DDAVEAVLFGENILAGLRPGKIIIDMSTIS-----------------PETS  101 (163)
T ss_dssp             HHHHBSEEEE-SSS---------------HHHHHHHHHCTTHGGGS-TTEEEEE-SS-------------------HHHH
T ss_pred             HhhcccceEeeccc---------------chhhhhhhhhhHHhhccccceEEEecCCcc-----------------hhhh
Confidence            77888999998642               2233444443   2222223 455555542                 2556


Q ss_pred             HHHHHHHHHCCCCEE
Q 009648          236 RKAEEALIASGLPYT  250 (530)
Q Consensus       236 ~~~E~~l~~~gl~~t  250 (530)
                      .+.++.+.+.|++|+
T Consensus       102 ~~~~~~~~~~g~~~v  116 (163)
T PF03446_consen  102 RELAERLAAKGVRYV  116 (163)
T ss_dssp             HHHHHHHHHTTEEEE
T ss_pred             hhhhhhhhhccceee
Confidence            667777777886665

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.66  E-value=0.0017  Score=64.49  Aligned_cols=108  Identities=22%  Similarity=0.278  Sum_probs=69.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ..+.+|+|.| .|++|+++++.|++.|. ++++++.+.                   .|.+.+.+++.++          
T Consensus         9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i----------   77 (231)
T cd00755           9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI----------   77 (231)
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH----------
Confidence            4456899999 77899999999999994 888877643                   2344444444443          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.-+++.+...++ .+.+...+ .++|+||.|...               +..-..|.+.|.++++ .||...+.+
T Consensus        78 -nP~~~V~~~~~~i~-~~~~~~l~~~~~D~VvdaiD~---------------~~~k~~L~~~c~~~~i-p~I~s~g~g  137 (231)
T cd00755          78 -NPECEVDAVEEFLT-PDNSEDLLGGDPDFVVDAIDS---------------IRAKVALIAYCRKRKI-PVISSMGAG  137 (231)
T ss_pred             -CCCcEEEEeeeecC-HhHHHHHhcCCCCEEEEcCCC---------------HHHHHHHHHHHHHhCC-CEEEEeCCc
Confidence             11234444544444 34455555 469999999632               3344568889998886 566544433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.64  E-value=0.00038  Score=71.76  Aligned_cols=116  Identities=13%  Similarity=0.087  Sum_probs=74.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ++|.|+|| |.+|..++..|+..|. +|+++++++++.+.....+.+..         ........+. .. .|   + +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~---------~~~~~~~~i~-~~-~d---~-~   66 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAA---------PVEGFDTKIT-GT-ND---Y-E   66 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhh---------hhcCCCcEEE-eC-CC---H-H
Confidence            68999998 9999999999999875 99999998877654332222210         0000111211 11 12   3 3


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE-EEEEcC
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVSS  212 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r-~V~iSS  212 (530)
                      .++++|+||.++|............+.-|....+.+++.+.+...+. +|.++.
T Consensus        67 ~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         67 DIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             HHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            57899999999986543322223345667788888888887775443 555543

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.61  E-value=0.00081  Score=69.72  Aligned_cols=114  Identities=18%  Similarity=0.131  Sum_probs=80.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~s  156 (530)
                      .++|.|+|+ |+||..++..|+..|  .++++++++.+++......+....        . .. ....+.. +|      
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~--------~-~~-~~~~v~~~~d------   65 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGS--------A-FL-KNPKIEADKD------   65 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhh--------c-cC-CCCEEEECCC------
Confidence            358999996 999999999999887  589999998877766555554330        0 11 1113332 23      


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      .+ .++++|+||.+||.......+-...+..|..-.+.+++.+++++.+ .+|.+|
T Consensus        66 y~-~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          66 YS-VTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             HH-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            23 3789999999999765543344566888999999999999988654 445555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.60  E-value=0.00064  Score=70.33  Aligned_cols=115  Identities=16%  Similarity=0.111  Sum_probs=78.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|++|.||..++..|+..|  .++++++++  ++....-.+.+          + .  ....+..+.  ..+++.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~----------~-~--~~~~i~~~~--~~~~~y   63 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSH----------I-N--TPAKVTGYL--GPEELK   63 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHh----------C-C--CcceEEEec--CCCchH
Confidence            479999999999999999999888  589999987  33322211211          1 0  112222110  112356


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE-EEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r-~V~iSS  212 (530)
                      +.++++|+||.+||........-...++.|....+.+++...+++..- ||.+|-
T Consensus        64 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN  118 (310)
T cd01337          64 KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN  118 (310)
T ss_pred             HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            778999999999997655444556678899999999999998886554 444443

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.59  E-value=0.0013  Score=68.13  Aligned_cols=114  Identities=16%  Similarity=0.114  Sum_probs=81.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCC-CCCeEEEEecCCCHhhHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP-VEMLELVECDLEKRVQIE  158 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~-~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|.|.|+ |+||..++..|+.+|  .++++++.+++++......+.+.         ..+. ...+.+..+|       -
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~---------~~~~~~~~~~i~~~~-------y   63 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHA---------TALTYSTNTKIRAGD-------Y   63 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhh---------hccCCCCCEEEEECC-------H
Confidence            4889997 999999999999888  48999999888776655444432         1111 1245555433       3


Q ss_pred             HHhCCCcEEEEcccCCCCccCC--CCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFD--ITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~--~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +.++++|+||.+||........  -...+..|....+.+++.+.+++..-++.+-|
T Consensus        64 ~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          64 DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            5678999999999975443222  25668899999999999999887665555444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.59  E-value=0.00099  Score=65.85  Aligned_cols=108  Identities=19%  Similarity=0.253  Sum_probs=72.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC-------------------chhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~-------------------~~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ..+.+|+|.| .|.+|+++++.|++.|. ++++++.+                   ..|.+.+.+.++++          
T Consensus        19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~----------   87 (228)
T cd00757          19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI----------   87 (228)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh----------
Confidence            4567899999 78899999999999995 77776543                   23445555555444          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.-+++.+..++ +.+.+.+.++++|+||.|...               ...-..+-++|.++++ .+|+.+..+
T Consensus        88 -np~~~i~~~~~~i-~~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~~i-p~i~~g~~g  146 (228)
T cd00757          88 -NPDVEIEAYNERL-DAENAEELIAGYDLVLDCTDN---------------FATRYLINDACVKLGK-PLVSGAVLG  146 (228)
T ss_pred             -CCCCEEEEeccee-CHHHHHHHHhCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence             1123455555555 345677888999999999642               2233456777888886 788876543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.58  E-value=0.00037  Score=61.89  Aligned_cols=97  Identities=26%  Similarity=0.263  Sum_probs=57.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ||.|+||||++|+.|++.|+++- +++..+..+.. ....+...+...           .....+.+.  | .+.    .
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~--~-~~~----~   62 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-----------KGFEDLSVE--D-ADP----E   62 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-----------TTTEEEBEE--E-TSG----H
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-----------ccccceeEe--e-cch----h
Confidence            69999999999999999999974 56555544433 322222111100           000122222  2 232    2


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      .+.++|+||.|.+.                ..+..++..+.+.|+ ++|=+|+.
T Consensus        63 ~~~~~Dvvf~a~~~----------------~~~~~~~~~~~~~g~-~ViD~s~~   99 (121)
T PF01118_consen   63 ELSDVDVVFLALPH----------------GASKELAPKLLKAGI-KVIDLSGD   99 (121)
T ss_dssp             HHTTESEEEE-SCH----------------HHHHHHHHHHHHTTS-EEEESSST
T ss_pred             HhhcCCEEEecCch----------------hHHHHHHHHHhhCCc-EEEeCCHH
Confidence            34899999999753                246777777788887 66666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.57  E-value=0.00025  Score=74.47  Aligned_cols=99  Identities=21%  Similarity=0.120  Sum_probs=63.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~sl  157 (530)
                      +++|+|+||||++|+.+++.|.++ +++++++.++.+..+.+.+.+                 +.+..+ ..++.+.+..
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~-----------------~~~~~~~~~~~~~~~~~   64 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVH-----------------PHLRGLVDLVLEPLDPE   64 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhC-----------------cccccccCceeecCCHH
Confidence            368999999999999999999987 688888777543322221110                 111111 1233333322


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        .+.++|+||.|...                .....++.++.++|+ ++|=.|+..
T Consensus        65 --~~~~vD~Vf~alP~----------------~~~~~~v~~a~~aG~-~VID~S~~f  102 (343)
T PRK00436         65 --ILAGADVVFLALPH----------------GVSMDLAPQLLEAGV-KVIDLSADF  102 (343)
T ss_pred             --HhcCCCEEEECCCc----------------HHHHHHHHHHHhCCC-EEEECCccc
Confidence              45789999998753                235667777777775 788777753

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.56  E-value=0.0018  Score=58.99  Aligned_cols=105  Identities=18%  Similarity=0.255  Sum_probs=71.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      +|+|.|+ |.+|.++++.|++.|. ++++++.+.                   .|.+.+.+.++++           .+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-----------~p~   68 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNEL-----------NPG   68 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHH-----------CCC
Confidence            4899995 8899999999999996 788887541                   2444444444443           112


Q ss_pred             CCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      -+++.+..++.+. .....++++|+||.|...               ......+.++|+++++ .||...+.+.
T Consensus        69 v~i~~~~~~~~~~-~~~~~~~~~diVi~~~d~---------------~~~~~~l~~~~~~~~i-~~i~~~~~g~  125 (143)
T cd01483          69 VNVTAVPEGISED-NLDDFLDGVDLVIDAIDN---------------IAVRRALNRACKELGI-PVIDAGGLGL  125 (143)
T ss_pred             cEEEEEeeecChh-hHHHHhcCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEcCCCc
Confidence            3444555555442 346778899999999642               3446677888998886 6777776653

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.53  E-value=0.0039  Score=63.15  Aligned_cols=107  Identities=19%  Similarity=0.210  Sum_probs=69.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch-------------------hHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~-------------------k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|+++++.|++.| .++++++.+.-                   |.+.+.+++.+.          
T Consensus        28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I----------   96 (268)
T PRK15116         28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI----------   96 (268)
T ss_pred             hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH----------
Confidence            4567899999 7789999999999999 68888886521                   222333333322          


Q ss_pred             CCCCCCeEEEEe-cCCCHhhHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVEC-DLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~-Dl~d~~sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                         ++.+++... +..+.+.+...+ .++|+||.|...               +..-..|.+.|.++++ .||.+...+
T Consensus        97 ---NP~~~V~~i~~~i~~e~~~~ll~~~~D~VIdaiD~---------------~~~k~~L~~~c~~~~i-p~I~~gGag  156 (268)
T PRK15116         97 ---NPECRVTVVDDFITPDNVAEYMSAGFSYVIDAIDS---------------VRPKAALIAYCRRNKI-PLVTTGGAG  156 (268)
T ss_pred             ---CCCcEEEEEecccChhhHHHHhcCCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEECCcc
Confidence               233333322 233455566666 479999999752               3334568888998886 666554443

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.53  E-value=0.00038  Score=71.82  Aligned_cols=41  Identities=17%  Similarity=0.138  Sum_probs=36.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ++|.|+| .|.+|..++..|+++|++|++++|+++..+....
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~   43 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA   43 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence            4799999 9999999999999999999999999877665443

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.51  E-value=0.0012  Score=70.28  Aligned_cols=108  Identities=17%  Similarity=0.182  Sum_probs=74.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC-------------------chhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~-------------------~~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|+.++..|++.|. ++++++++                   ..|.+.+.+.++++.         
T Consensus       133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n---------  202 (376)
T PRK08762        133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN---------  202 (376)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC---------
Confidence            4567899997 58899999999999996 89999987                   456666666665541         


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        ..-+++.+...+. .+.+...++++|+||+|...               ...-..+-++|.+.++ .||+.+..+
T Consensus       203 --p~v~v~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~---------------~~~r~~ln~~~~~~~i-p~i~~~~~g  260 (376)
T PRK08762        203 --PDVQVEAVQERVT-SDNVEALLQDVDVVVDGADN---------------FPTRYLLNDACVKLGK-PLVYGAVFR  260 (376)
T ss_pred             --CCCEEEEEeccCC-hHHHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence              1123344444443 34577788999999999642               2223346677888886 788876544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.51  E-value=0.00039  Score=70.76  Aligned_cols=75  Identities=27%  Similarity=0.403  Sum_probs=55.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |++|+.++..|...| .+|+++.|+.++.+.+.+.+...              ..+.+   ++    .
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~--------------~~~~~---~~----~  178 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL--------------GKAEL---DL----E  178 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc--------------cceee---cc----c
Confidence            45689999996 999999999999999 79999999998888776543311              11222   21    2


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +...+.++|+|||+....
T Consensus       179 ~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        179 LQEELADFDLIINATSAG  196 (278)
T ss_pred             chhccccCCEEEECCcCC
Confidence            345667899999998643

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.50  E-value=0.048  Score=50.82  Aligned_cols=199  Identities=15%  Similarity=0.111  Sum_probs=113.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC---Hhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---RVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---~~s  156 (530)
                      ..+|+|-||-|-+|+++++.+.+++|-|.-++-.+....                       ..-.++.+|-.-   .++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------------------d~sI~V~~~~swtEQe~~   59 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------------------DSSILVDGNKSWTEQEQS   59 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------------------cceEEecCCcchhHHHHH
Confidence            358999999999999999999999999988776542110                       111233343321   222


Q ss_pred             H----HHHh--CCCcEEEEcccCCCCccCC-------CCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCCcc
Q 009648          157 I----EPAL--GNASVVICCIGASEKEVFD-------ITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l----~~a~--~~vD~VI~~Ag~~~~~~~~-------~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +    .+.+  +.+|+|||.||.+......       ...+|.-.+....--...+.++ +.+-++-+......-.+.  
T Consensus        60 v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gT--  137 (236)
T KOG4022|consen   60 VLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGT--  137 (236)
T ss_pred             HHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCC--
Confidence            2    2233  3589999999865332221       1233433333333233334433 333455555443322222  


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-----CCCC----EEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-----SGLP----YTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-----~gl~----~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ...-+|+..|.++-++.+.     +|++    .+.|-|-.+..|.++.        ...+..++.|....-|++.++
T Consensus       138 ---PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRK--------wMP~ADfssWTPL~fi~e~fl  206 (236)
T KOG4022|consen  138 ---PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRK--------WMPNADFSSWTPLSFISEHFL  206 (236)
T ss_pred             ---CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccc--------cCCCCcccCcccHHHHHHHHH
Confidence               2356799999999988763     5554    4455565555554321        122334556788888888887


Q ss_pred             HHHhC-CCCCCCcEEEEeCCCC
Q 009648          294 CMAKN-RSLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~-~~~~~g~vynv~~~~~  314 (530)
                      .-... ..-+.|..+.|+..+.
T Consensus       207 kWtt~~~RPssGsLlqi~TtnG  228 (236)
T KOG4022|consen  207 KWTTETSRPSSGSLLQITTTNG  228 (236)
T ss_pred             HHhccCCCCCCCceEEEEecCC
Confidence            76543 2224566666666554

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.48  E-value=0.002  Score=66.64  Aligned_cols=113  Identities=19%  Similarity=0.127  Sum_probs=75.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|.|+ |.+|..++..|+..|  .+|.+++|+.++.......+...         ... .....+...   |   . 
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~---------~~~-~~~~~i~~~---d---~-   62 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHG---------TPF-VKPVRIYAG---D---Y-   62 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcc---------ccc-cCCeEEeeC---C---H-
Confidence            47999997 999999999999999  69999999987665422222211         000 112222222   2   2 


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +.++++|+||.++|.......+.......|....+.+++.+.+.+.+-+|.+-
T Consensus        63 ~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          63 ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            34789999999999754443444456777888888888888877544444433

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.48  E-value=0.00048  Score=70.92  Aligned_cols=116  Identities=19%  Similarity=0.172  Sum_probs=80.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.|+|| |+||+.++..|+.++  .+++++++++++.......+.+.          ......-..+.+| .+    -
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~----------~~~~~~~~~i~~~-~~----y   64 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHA----------AAPLGSDVKITGD-GD----Y   64 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhc----------chhccCceEEecC-CC----h
Confidence            47999999 999999999998876  48999999966655543333221          0111111222222 11    4


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +.++++|+||-.||...+...+-...++.|..-...+++...+.+.+-+|.+-|
T Consensus        65 ~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          65 EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            557899999999998776655666778999999999999999887655555444

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.46  E-value=0.0024  Score=62.58  Aligned_cols=107  Identities=17%  Similarity=0.261  Sum_probs=71.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ....+|+|.| .|.+|..++..|++.|. ++++++.+.                  .|.+.+.+.++++           
T Consensus        26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-----------   93 (212)
T PRK08644         26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI-----------   93 (212)
T ss_pred             HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-----------
Confidence            4566899999 68899999999999995 688888872                  2344444444433           


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCC
Q 009648          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSL  213 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~  213 (530)
                      ...-+++.+...+++ +.+.+.++++|+||.|..               |...-..+.+.|.+. ++ .+|+.+..
T Consensus        94 np~v~v~~~~~~i~~-~~~~~~~~~~DvVI~a~D---------------~~~~r~~l~~~~~~~~~~-p~I~~~~~  152 (212)
T PRK08644         94 NPFVEIEAHNEKIDE-DNIEELFKDCDIVVEAFD---------------NAETKAMLVETVLEHPGK-KLVAASGM  152 (212)
T ss_pred             CCCCEEEEEeeecCH-HHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHHhCCC-CEEEeehh
Confidence            112345555555654 456778899999999942               233345566788877 65 67776543

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.46  E-value=0.00037  Score=66.76  Aligned_cols=68  Identities=16%  Similarity=0.226  Sum_probs=42.5

Q ss_pred             CCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--HhhHHHHhCCC
Q 009648           87 GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEPALGNA  164 (530)
Q Consensus        87 GAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~sl~~a~~~v  164 (530)
                      -.||..|.+|+++++.+|++|+++..... ..                     .+.+++++..+-.+  .+.+.+.+..+
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---------------------~p~~~~~i~v~sa~em~~~~~~~~~~~   83 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPSS-LP---------------------PPPGVKVIRVESAEEMLEAVKELLPSA   83 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------TTEEEEE-SSHHHHHHHHHHHGGGG
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---------------------ccccceEEEecchhhhhhhhccccCcc
Confidence            34899999999999999999999998742 11                     12467776644322  23355566788


Q ss_pred             cEEEEcccCCCC
Q 009648          165 SVVICCIGASEK  176 (530)
Q Consensus       165 D~VI~~Ag~~~~  176 (530)
                      |++||+|+..+.
T Consensus        84 Di~I~aAAVsDf   95 (185)
T PF04127_consen   84 DIIIMAAAVSDF   95 (185)
T ss_dssp             SEEEE-SB--SE
T ss_pred             eeEEEecchhhe
Confidence            999999997654

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.45  E-value=0.0013  Score=71.13  Aligned_cols=102  Identities=19%  Similarity=0.228  Sum_probs=74.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+.                 ..++.++.||..+.+.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~-----------------~~~~~~i~gd~~~~~~L  290 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE-----------------LPNTLVLHGDGTDQELL  290 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----------------CCCCeEEECCCCCHHHH
Confidence            34688999996 9999999999999999999999999876655331                 13578899999999887


Q ss_pred             HH-HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          158 EP-ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       158 ~~-a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      .+ .++++|+||.+....           ..|...    ...|++.+..++|....
T Consensus       291 ~~~~~~~a~~vi~~~~~~-----------~~n~~~----~~~~~~~~~~~ii~~~~  331 (453)
T PRK09496        291 EEEGIDEADAFIALTNDD-----------EANILS----SLLAKRLGAKKVIALVN  331 (453)
T ss_pred             HhcCCccCCEEEECCCCc-----------HHHHHH----HHHHHHhCCCeEEEEEC
Confidence            54 457899999775421           334432    33445556666665443

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.45  E-value=0.0024  Score=61.78  Aligned_cols=110  Identities=20%  Similarity=0.282  Sum_probs=72.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch---------------------hHHHHHHHHHHhhhhccccc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---------------------RAENLVQSVKQMKLDGELAN  135 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~---------------------k~~~l~~~~~~~~l~~~~~~  135 (530)
                      ....+|+|.|++| +|.++++.|+..| .++++++.+.-                     |.+.+.+.++++        
T Consensus        17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l--------   87 (198)
T cd01485          17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL--------   87 (198)
T ss_pred             HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH--------
Confidence            3456899999666 9999999999999 56888876421                     222333333333        


Q ss_pred             cCCCCCCCeEEEEecCCC-HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          136 KGIQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       136 ~g~~~~~~v~~v~~Dl~d-~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                         .+.-+++.+..++.+ .+.....+.++|+||.|..               +...-..+-+.|+++++ .||+.++.+
T Consensus        88 ---Np~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~~i-p~i~~~~~G  148 (198)
T cd01485          88 ---NPNVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKHHI-PFISCATYG  148 (198)
T ss_pred             ---CCCCEEEEEecccccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence               122345555555642 3456777899999998843               12334556688888887 788888765


Q ss_pred             c
Q 009648          215 T  215 (530)
Q Consensus       215 v  215 (530)
                      .
T Consensus       149 ~  149 (198)
T cd01485         149 L  149 (198)
T ss_pred             C
Confidence            5

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.44  E-value=0.0015  Score=70.57  Aligned_cols=119  Identities=14%  Similarity=0.137  Sum_probs=82.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhC---C----CeEEEEEC--CchhHHHHHHHHHHhhhhccccccCCCC-CCCeEE
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKL---G----FRVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQP-VEMLEL  146 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~---G----~~V~~~~R--~~~k~~~l~~~~~~~~l~~~~~~~g~~~-~~~v~~  146 (530)
                      +...-+|+||||+|.||.+|+-.+++-   |    ..+++++.  +.+++....-.+....          +. ...+.+
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a----------~pll~~v~i  189 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA----------FPLLRGISV  189 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhH----------HhhcCCcEE
Confidence            344568999999999999999888762   3    34666777  4666665554444321          01 123433


Q ss_pred             EEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCC--CEEEEEcC
Q 009648          147 VECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSS  212 (530)
Q Consensus       147 v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv--~r~V~iSS  212 (530)
                      .. |      ...+|+++|+||.++|.......+-...++.|....+.+.++..+++.  .++|.+.|
T Consensus       190 ~~-~------~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         190 TT-D------LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             EE-C------CHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            32 2      256789999999999976655555566788999999999999988765  56666654

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.44  E-value=0.0028  Score=63.41  Aligned_cols=107  Identities=15%  Similarity=0.234  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.|+ |++|..+++.|+..| .++++++.+.                   .|.+.+.++++++          
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l----------   98 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI----------   98 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH----------
Confidence            45678999996 899999999999999 4788877643                   2333333334333          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       .+.-+++.+...++ .+.+.+.++++|+||.|..               |...-..+-++|.++++ .||+.+..
T Consensus        99 -np~v~i~~~~~~i~-~~~~~~~~~~~DiVi~~~D---------------~~~~r~~ln~~~~~~~i-p~v~~~~~  156 (245)
T PRK05690         99 -NPHIAIETINARLD-DDELAALIAGHDLVLDCTD---------------NVATRNQLNRACFAAKK-PLVSGAAI  156 (245)
T ss_pred             -CCCCEEEEEeccCC-HHHHHHHHhcCCEEEecCC---------------CHHHHHHHHHHHHHhCC-EEEEeeec
Confidence             11234455555554 3456778899999999963               12233456677888875 78775543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.43  E-value=0.0025  Score=60.37  Aligned_cols=101  Identities=17%  Similarity=0.298  Sum_probs=66.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc------------------hhHHHHHHHHHHhhhhccccccCCCCCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGIQPVE  142 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~------------------~k~~~l~~~~~~~~l~~~~~~~g~~~~~  142 (530)
                      +|+|.| .|.+|..+++.|++.|. ++++++++.                  .|.+.+.++++++           ...-
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-----------np~v   68 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-----------NPFV   68 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-----------CCCC
Confidence            489999 68899999999999996 699999875                  2333333333333           1123


Q ss_pred             CeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEc
Q 009648          143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVS  211 (530)
Q Consensus       143 ~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iS  211 (530)
                      +++.+...+.. +.+.+.++++|+||.|..               |...-..+.+.+.+. ++ .||+-+
T Consensus        69 ~i~~~~~~~~~-~~~~~~l~~~DlVi~~~d---------------~~~~r~~i~~~~~~~~~i-p~i~~~  121 (174)
T cd01487          69 KIEAINIKIDE-NNLEGLFGDCDIVVEAFD---------------NAETKAMLAESLLGNKNK-PVVCAS  121 (174)
T ss_pred             EEEEEEeecCh-hhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHCCC-CEEEEe
Confidence            45555555544 557788999999999942               122334566777766 64 676654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.43  E-value=0.00078  Score=69.80  Aligned_cols=113  Identities=16%  Similarity=0.147  Sum_probs=76.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|.|+|++|.||..++..|+..|.  +++++++++..  .....+.+          + .  ....+....  +.+++.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~~----------~-~--~~~~i~~~~--~~~~~~~   63 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLSH----------I-P--TAASVKGFS--GEEGLEN   63 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhhc----------C-C--cCceEEEec--CCCchHH
Confidence            589999999999999999998874  89999987621  11111110          1 1  112222111  1123567


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEE-EEEc
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF-IMVS  211 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~-V~iS  211 (530)
                      +++++|+||.+||.......+....+..|+.-.+.+++...+++.+-+ |.+|
T Consensus        64 ~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        64 ALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             HcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            899999999999976555555566788999999999999988865544 4444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.42  E-value=0.0021  Score=67.85  Aligned_cols=109  Identities=19%  Similarity=0.133  Sum_probs=74.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|+.++..|+..| .++++++++.                   .|.+.+.+.++++          
T Consensus        26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~----------   94 (355)
T PRK05597         26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL----------   94 (355)
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH----------
Confidence            4567899999 5889999999999999 4888888753                   3455555555544          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-+++.+...++. +...+.++++|+||.|...               +..-..+-++|.++++ .||+.+..+.
T Consensus        95 -np~v~v~~~~~~i~~-~~~~~~~~~~DvVvd~~d~---------------~~~r~~~n~~c~~~~i-p~v~~~~~g~  154 (355)
T PRK05597         95 -NPDVKVTVSVRRLTW-SNALDELRDADVILDGSDN---------------FDTRHLASWAAARLGI-PHVWASILGF  154 (355)
T ss_pred             -CCCcEEEEEEeecCH-HHHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence             112344555555543 4566788999999999631               2222345677888886 7888776544

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.42  E-value=0.00061  Score=62.45  Aligned_cols=76  Identities=17%  Similarity=0.262  Sum_probs=54.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.++.+.+.+.+...                  .+..+..+   
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~------------------~~~~~~~~---   74 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL------------------GIAIAYLD---   74 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc------------------ccceeecc---
Confidence            34678999996 999999999999996 89999999988776655432210                  01223333   


Q ss_pred             HHHHhCCCcEEEEcccCCC
Q 009648          157 IEPALGNASVVICCIGASE  175 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~  175 (530)
                      ..++++++|+||+|.....
T Consensus        75 ~~~~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          75 LEELLAEADLIINTTPVGM   93 (155)
T ss_pred             hhhccccCCEEEeCcCCCC
Confidence            3444789999999987543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.39  E-value=0.00071  Score=68.54  Aligned_cols=75  Identities=20%  Similarity=0.332  Sum_probs=54.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |.+|+.++..|++.|++|+++.|+.++.+.+.+.+...              ..+..+  ++.+    
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--------------~~~~~~--~~~~----  173 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--------------GEIQAF--SMDE----  173 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--------------CceEEe--chhh----
Confidence            34678999997 89999999999999999999999998887776654321              122222  2211    


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                       ..+.++|+||||.+..
T Consensus       174 -~~~~~~DivInatp~g  189 (270)
T TIGR00507       174 -LPLHRVDLIINATSAG  189 (270)
T ss_pred             -hcccCccEEEECCCCC
Confidence             1245799999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.38  E-value=0.00045  Score=72.26  Aligned_cols=95  Identities=21%  Similarity=0.217  Sum_probs=58.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ++++|+|+||||++|+.|++.|.+++|   +++.+. +.++..+..                  ...+   ...++.+.+
T Consensus         3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~-s~~~aG~~l------------------~~~~---~~l~~~~~~   60 (336)
T PRK05671          3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLA-SSESAGHSV------------------PFAG---KNLRVREVD   60 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEE-CcccCCCee------------------ccCC---cceEEeeCC
Confidence            347899999999999999999998776   333443 332211100                  0011   123333322


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      ..  .++++|+||.+++..                ....+++.+.++|+ ++|=.|+..
T Consensus        61 ~~--~~~~vD~vFla~p~~----------------~s~~~v~~~~~~G~-~VIDlS~~f  100 (336)
T PRK05671         61 SF--DFSQVQLAFFAAGAA----------------VSRSFAEKARAAGC-SVIDLSGAL  100 (336)
T ss_pred             hH--HhcCCCEEEEcCCHH----------------HHHHHHHHHHHCCC-eEEECchhh
Confidence            22  257899999997631                24557788877886 577677653

>PRK04148 hypothetical protein; Provisional

Probab=97.37  E-value=0.0016  Score=58.95  Aligned_cols=93  Identities=16%  Similarity=0.063  Sum_probs=70.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++|++.| +| -|.+++..|.+.|++|++++.++...+...+                   ..++++.+|+.+++  -
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-------------------~~~~~v~dDlf~p~--~   72 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-------------------LGLNAFVDDLFNPN--L   72 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------hCCeEEECcCCCCC--H
Confidence            457899999 66 7889999999999999999999986655432                   35789999999865  2


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      ..-+++|.|+-+=-               -......+++.|++.++.-+|.
T Consensus        73 ~~y~~a~liysirp---------------p~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         73 EIYKNAKLIYSIRP---------------PRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             HHHhcCCEEEEeCC---------------CHHHHHHHHHHHHHcCCCEEEE
Confidence            34578899887621               1334677899999988864443

>PLN02602 lactate dehydrogenase

Probab=97.36  E-value=0.0013  Score=69.18  Aligned_cols=114  Identities=10%  Similarity=0.106  Sum_probs=79.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.|+|+ |.||..++..|+..|  .++++++++++++......+....        . + .....+.. + .|   . 
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~--------~-~-~~~~~i~~-~-~d---y-  100 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAA--------A-F-LPRTKILA-S-TD---Y-  100 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhh--------h-c-CCCCEEEe-C-CC---H-
Confidence            68999995 999999999999887  489999999887766555444320        0 1 11233332 1 12   2 


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      +.++++|+||.+||.......+-...+..|....+.+++..++++.+ .+|.+|
T Consensus       101 ~~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        101 AVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            23789999999999765544444566788898899999999887654 455555

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.36  E-value=0.0036  Score=62.48  Aligned_cols=108  Identities=14%  Similarity=0.243  Sum_probs=70.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|..++..|++.| -++++++++.                   .|.+.+.++++++          
T Consensus        22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i----------   90 (240)
T TIGR02355        22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI----------   90 (240)
T ss_pred             HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH----------
Confidence            4456899999 7789999999999999 4777777643                   2333333444433          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.-+++.+...+ +.+.+.+.++++|+||.+...               ...-..|-++|.++++ .||+.+..+
T Consensus        91 -np~v~i~~~~~~i-~~~~~~~~~~~~DlVvd~~D~---------------~~~r~~ln~~~~~~~i-p~v~~~~~g  149 (240)
T TIGR02355        91 -NPHIAINPINAKL-DDAELAALIAEHDIVVDCTDN---------------VEVRNQLNRQCFAAKV-PLVSGAAIR  149 (240)
T ss_pred             -CCCcEEEEEeccC-CHHHHHHHhhcCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence             1112344444344 335577888999999999632               2234446678888886 788766544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.35  E-value=0.0006  Score=71.67  Aligned_cols=99  Identities=19%  Similarity=0.150  Sum_probs=61.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~sl  157 (530)
                      ++|.|+||||++|..+++.|.++ +++++.+ +++.+..+.+.+.+                 +.+..+ ..++.+. +.
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~-----------------~~l~~~~~~~~~~~-~~   62 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH-----------------PHLRGLVDLNLEPI-DE   62 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC-----------------ccccccCCceeecC-CH
Confidence            47999999999999999999987 6788854 54432222111110                 111111 1112211 12


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      .++++++|+||.|.+..                ....++..+.++|+ ++|-+|+..
T Consensus        63 ~~~~~~~DvVf~alP~~----------------~s~~~~~~~~~~G~-~VIDlS~~f  102 (346)
T TIGR01850        63 EEIAEDADVVFLALPHG----------------VSAELAPELLAAGV-KVIDLSADF  102 (346)
T ss_pred             HHhhcCCCEEEECCCch----------------HHHHHHHHHHhCCC-EEEeCChhh
Confidence            34446899999998642                46777777777774 888888753

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.35  E-value=0.0028  Score=61.36  Aligned_cols=108  Identities=15%  Similarity=0.198  Sum_probs=70.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.|+.| +|.++++.|+..|. ++++++.+.                   .|.+.+.+.++++          
T Consensus        19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l----------   87 (197)
T cd01492          19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL----------   87 (197)
T ss_pred             HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH----------
Confidence            4566899999555 99999999999994 688877542                   2334444444444          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-+++.+...+.+  ...+.++++|+||.+...               ...-..+-+.|++.++ .||+.++.+.
T Consensus        88 -Np~v~i~~~~~~~~~--~~~~~~~~~dvVi~~~~~---------------~~~~~~ln~~c~~~~i-p~i~~~~~G~  146 (197)
T cd01492          88 -NPRVKVSVDTDDISE--KPEEFFSQFDVVVATELS---------------RAELVKINELCRKLGV-KFYATGVHGL  146 (197)
T ss_pred             -CCCCEEEEEecCccc--cHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence             122345555555542  245678899999988431               2234456678888887 7888777654

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08328 hypothetical protein; Provisional

Probab=97.34  E-value=0.0038  Score=61.91  Aligned_cols=109  Identities=20%  Similarity=0.209  Sum_probs=69.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHH--------------------HHHHHhhhhcccccc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV--------------------QSVKQMKLDGELANK  136 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~--------------------~~~~~~~l~~~~~~~  136 (530)
                      ..+.+|+|.| .|++|++++..|++.| .++++++.+.-....+.                    +.++++         
T Consensus        25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~---------   94 (231)
T PRK08328         25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF---------   94 (231)
T ss_pred             HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh---------
Confidence            4456899999 6779999999999999 57888876542222221                    111111         


Q ss_pred             CCCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          137 GIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       137 g~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                        .+.-.++.+...+ +.+.+.+.++++|+||.|...               ...-..+-++|++.++ .+|+.+..+.
T Consensus        95 --np~v~v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~---------------~~~r~~l~~~~~~~~i-p~i~g~~~g~  154 (231)
T PRK08328         95 --NSDIKIETFVGRL-SEENIDEVLKGVDVIVDCLDN---------------FETRYLLDDYAHKKGI-PLVHGAVEGT  154 (231)
T ss_pred             --CCCCEEEEEeccC-CHHHHHHHHhcCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEeeccC
Confidence              1223445555555 345577788999999999632               2222345567788886 6887665543

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.32  E-value=0.0018  Score=68.83  Aligned_cols=118  Identities=12%  Similarity=0.041  Sum_probs=80.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-e----EEE----EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-R----VRA----GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~----V~~----~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      +.-+|.|+||+|.||.+++..|+..|. .    |.+    ++++.+++......+.+.-.        .. ..++.+..+
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~--------~~-~~~v~i~~~  113 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLY--------PL-LREVSIGID  113 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhh--------hh-cCceEEecC
Confidence            356899999999999999999998872 2    343    37888877776555543310        00 123332222


Q ss_pred             cCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEcC
Q 009648          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS  212 (530)
Q Consensus       150 Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iSS  212 (530)
                      |       ...++++|+||.+||.......+....+..|+...+.+++...++. .. .+|.+|.
T Consensus       114 ~-------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       114 P-------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             C-------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            2       3567899999999997655544556678899999999999998853 33 4555553

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.30  E-value=0.0022  Score=66.03  Aligned_cols=112  Identities=14%  Similarity=0.117  Sum_probs=79.6

Q ss_pred             EEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           83 AFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |.|.|+ |.+|..++..|+..|  .++++++++.+++......+.+..        .  ......+..+  .|    .+.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~--------~--~~~~~~i~~~--~~----~~~   63 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHAS--------A--FLATGTIVRG--GD----YAD   63 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhc--------c--ccCCCeEEEC--CC----HHH
Confidence            468895 889999999999988  789999999988877766655441        1  0112233321  12    247


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++|+||.++|.......+....+..|+...+.+++..++++.+ .+|.+|
T Consensus        64 l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          64 AADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            889999999999755444444566788999999999999988654 444444

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.29  E-value=0.0019  Score=66.81  Aligned_cols=115  Identities=13%  Similarity=0.057  Sum_probs=72.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~sl~  158 (530)
                      |+|.|.|+ |.+|..++..|+.+|+ +|++++++++........+.+.         +........+. ..|      ++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~---------~~~~~~~~~i~~t~d------~~   65 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEA---------SPVGGFDTKVTGTNN------YA   65 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhh---------hhccCCCcEEEecCC------HH
Confidence            57999995 9999999999999886 8999999776444221111111         00000011111 122      33


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      . ++++|+||-++|............+..|....+.+++.+.+++-. .||.+|.
T Consensus        66 ~-~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        66 D-TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             H-hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            3 689999999999654432233345678898999999988877543 4555554

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.28  E-value=0.00073  Score=70.84  Aligned_cols=90  Identities=18%  Similarity=0.201  Sum_probs=59.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEE---EEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~---~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|+|.||||++|+.|++.|.++||.+.   .+.+..+....+.                   ..+..++..|+.     .
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~-------------------~~~~~~~~~~~~-----~   56 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVT-------------------FKGKELEVNEAK-----I   56 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeee-------------------eCCeeEEEEeCC-----h
Confidence            489999999999999999999887654   4446543222210                   122455556663     2


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ..+.++|+||.|+|..                .+..++..+.+.|+ ++|=.|+
T Consensus        57 ~~~~~~D~v~~a~g~~----------------~s~~~a~~~~~~G~-~VID~ss   93 (339)
T TIGR01296        57 ESFEGIDIALFSAGGS----------------VSKEFAPKAAKCGA-IVIDNTS   93 (339)
T ss_pred             HHhcCCCEEEECCCHH----------------HHHHHHHHHHHCCC-EEEECCH
Confidence            3457999999998752                24556666666776 5655565

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.28  E-value=0.0036  Score=66.38  Aligned_cols=107  Identities=18%  Similarity=0.208  Sum_probs=72.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|..++..|+..| .++++++++.                   .|...+.+++.++          
T Consensus        39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~----------  107 (370)
T PRK05600         39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI----------  107 (370)
T ss_pred             hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH----------
Confidence            4567899999 6779999999999999 5888888762                   2444444444443          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       ...-+++.+...++ .+.+.++++++|+||.|..               |+..-..+-++|.+.++ .+|+.+..
T Consensus       108 -np~v~i~~~~~~i~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~in~~~~~~~i-P~v~~~~~  165 (370)
T PRK05600        108 -QPDIRVNALRERLT-AENAVELLNGVDLVLDGSD---------------SFATKFLVADAAEITGT-PLVWGTVL  165 (370)
T ss_pred             -CCCCeeEEeeeecC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence             11234555555554 4557788999999999963               23333345567777776 67776654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.22  E-value=0.0018  Score=66.59  Aligned_cols=113  Identities=14%  Similarity=0.091  Sum_probs=71.2

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      |.|+|| |.+|..++..|+.+|. +|+++++++++.......+...         .........+. .. .|   . +.+
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~---------~~~~~~~~~I~-~t-~d---~-~~l   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQA---------APILGSDTKVT-GT-ND---Y-EDI   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHh---------hhhcCCCeEEE-Ec-CC---H-HHh
Confidence            568997 9999999999998876 9999999987654332222211         00001112222 11 12   2 347


Q ss_pred             CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEE-EEEc
Q 009648          162 GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF-IMVS  211 (530)
Q Consensus       162 ~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~-V~iS  211 (530)
                      +++|+||.++|.......+....+.-|+...+.+++.+.+.....+ |.+|
T Consensus        65 ~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          65 AGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8999999999865443333233456678888888888887755444 4544

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.22  E-value=0.0031  Score=68.22  Aligned_cols=76  Identities=16%  Similarity=0.168  Sum_probs=51.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|++| +|..+++.|+++|++|++.+++........+.+..               .++.+..++..  .. 
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~---------------~g~~~~~~~~~--~~-   63 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE---------------EGIKVICGSHP--LE-   63 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh---------------cCCEEEeCCCC--HH-
Confidence            3467899999987 99999999999999999999875432222222221               23444443321  11 


Q ss_pred             HHHhC-CCcEEEEcccCC
Q 009648          158 EPALG-NASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~-~vD~VI~~Ag~~  174 (530)
                        .+. ++|+||++.|..
T Consensus        64 --~~~~~~d~vV~s~gi~   79 (447)
T PRK02472         64 --LLDEDFDLMVKNPGIP   79 (447)
T ss_pred             --HhcCcCCEEEECCCCC
Confidence              133 499999999864

>PRK08223 hypothetical protein; Validated

Probab=97.21  E-value=0.0069  Score=61.87  Aligned_cols=110  Identities=19%  Similarity=0.260  Sum_probs=71.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|..++..|++.| .++++++.+.                   .|.+.+.++++++          
T Consensus        25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i----------   93 (287)
T PRK08223         25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI----------   93 (287)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH----------
Confidence            4566899999 6779999999999999 4777777642                   2333344444333          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.-+|+.+...++ .+.+.++++++|+||++.-..             ++..-..+-++|+++++ .||+.+..+
T Consensus        94 -NP~v~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~-------------~~~~r~~ln~~c~~~~i-P~V~~~~~g  154 (287)
T PRK08223         94 -NPELEIRAFPEGIG-KENADAFLDGVDVYVDGLDFF-------------EFDARRLVFAACQQRGI-PALTAAPLG  154 (287)
T ss_pred             -CCCCEEEEEecccC-ccCHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence             12234555555554 345778889999999774210             12233456678888886 788876654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.17  E-value=0.0022  Score=65.65  Aligned_cols=75  Identities=19%  Similarity=0.206  Sum_probs=55.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+| +|+.|++++..|++.|. +|++++|+.++.+.+.+.+...             ...+.+...     +.
T Consensus       125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~-------------~~~~~~~~~-----~~  185 (284)
T PRK12549        125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR-------------FPAARATAG-----SD  185 (284)
T ss_pred             ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh-------------CCCeEEEec-----cc
Confidence            4567999999 57799999999999996 8999999999998887765432             022333221     22


Q ss_pred             HHHHhCCCcEEEEcc
Q 009648          157 IEPALGNASVVICCI  171 (530)
Q Consensus       157 l~~a~~~vD~VI~~A  171 (530)
                      +.+.+.++|+|||+.
T Consensus       186 ~~~~~~~aDiVInaT  200 (284)
T PRK12549        186 LAAALAAADGLVHAT  200 (284)
T ss_pred             hHhhhCCCCEEEECC
Confidence            455678899999994

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=97.17  E-value=0.011  Score=58.43  Aligned_cols=109  Identities=24%  Similarity=0.279  Sum_probs=74.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      .+..+|+|.| -|++|++.|+.|++.|. ++++++-+.                   .|.+-+.+++.+.          
T Consensus        28 l~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I----------   96 (263)
T COG1179          28 LKQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI----------   96 (263)
T ss_pred             HhhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh----------
Confidence            3455899999 67799999999999994 777766532                   2333344444333          


Q ss_pred             CCCCCCeEEEEe-cCCCHhhHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVEC-DLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~-Dl~d~~sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                         ++..++... |+..++.+.+.+ .++|+||.|.-               |+..=..|+..|.+++. .  +|||+|+
T Consensus        97 ---nP~c~V~~~~~f~t~en~~~~~~~~~DyvIDaiD---------------~v~~Kv~Li~~c~~~ki-~--vIss~Ga  155 (263)
T COG1179          97 ---NPECEVTAINDFITEENLEDLLSKGFDYVIDAID---------------SVRAKVALIAYCRRNKI-P--VISSMGA  155 (263)
T ss_pred             ---CCCceEeehHhhhCHhHHHHHhcCCCCEEEEchh---------------hhHHHHHHHHHHHHcCC-C--EEeeccc
Confidence               355555443 556777788777 46999999952               35556778999999876 3  4677776


Q ss_pred             cCC
Q 009648          216 NKF  218 (530)
Q Consensus       216 ~~~  218 (530)
                      ...
T Consensus       156 g~k  158 (263)
T COG1179         156 GGK  158 (263)
T ss_pred             cCC
Confidence            443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.16  E-value=0.0017  Score=66.28  Aligned_cols=107  Identities=18%  Similarity=0.217  Sum_probs=71.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++|+|.| +|+.+++++..|++.| .+|+++.|+.++.+.+.+.+.+.         +    ..+..  .++.+.+..
T Consensus       125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~---------~----~~~~~--~~~~~~~~~  188 (283)
T COG0169         125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL---------G----AAVEA--AALADLEGL  188 (283)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc---------c----ccccc--ccccccccc
Confidence            468999999 6779999999999999 58999999999999988776543         1    11111  222222211


Q ss_pred             HHHhCCCcEEEEcccCCCCcc--C---------CCCcchHhHHHH-HHHHHHHHHhcCCC
Q 009648          158 EPALGNASVVICCIGASEKEV--F---------DITGPYRIDFQA-TKNLVDAATIAKVN  205 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~--~---------~~~~~~~vNv~g-t~~Ll~aa~~~gv~  205 (530)
                      .    .+|+|||+....-...  .         ...-.+++++.- -..+++.|+++|.+
T Consensus       189 ~----~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~  244 (283)
T COG0169         189 E----EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK  244 (283)
T ss_pred             c----ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence            1    6899999976332111  1         011224555542 45689999999874

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.15  E-value=0.0045  Score=66.55  Aligned_cols=40  Identities=25%  Similarity=0.214  Sum_probs=36.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|.+|..++..|++.||+|++++|+.++.+.+.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~   40 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN   40 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence            4799998 899999999999999999999999998877654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.15  E-value=0.0029  Score=62.08  Aligned_cols=42  Identities=29%  Similarity=0.368  Sum_probs=38.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      |+|.|+||+|.+|..++..|++.||+|++.+|+.++.+.+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            479999999999999999999999999999999888776654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.11  E-value=0.0042  Score=63.95  Aligned_cols=43  Identities=26%  Similarity=0.251  Sum_probs=37.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+||+|.||..+++.+...|.+|++++++.++.+.+
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3467999999999999999988888899999999988776654

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.06  E-value=0.0068  Score=62.47  Aligned_cols=110  Identities=18%  Similarity=0.164  Sum_probs=77.4

Q ss_pred             EECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhC
Q 009648           85 VAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG  162 (530)
Q Consensus        85 VTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~  162 (530)
                      |.| .|.||..++..|+..|  .++.+++++.+++......+.+..         ......+.+..+|       .+.++
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~---------~~~~~~~~i~~~~-------~~~~~   63 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAA---------SFLPTPKKIRSGD-------YSDCK   63 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhh---------cccCCCeEEecCC-------HHHHC
Confidence            456 5999999999999887  479999998887776655554431         0111223333222       35788


Q ss_pred             CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       163 ~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++|+||.+||.......+-...+..|....+.+++.+++++.+ .+|.+|
T Consensus        64 daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        64 DADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            9999999999765544445567889999999999999988654 445555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.06  E-value=0.0081  Score=60.24  Aligned_cols=95  Identities=12%  Similarity=0.020  Sum_probs=74.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|||+|||+ =|+.|++.|.+.|+.|++.+-.....                     .....+.++.|-+.|.+.+.+
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---------------------~~~~~~~v~~G~l~~~~~l~~   59 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---------------------PADLPGPVRVGGFGGAEGLAA   59 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---------------------cccCCceEEECCCCCHHHHHH
Confidence            46799999998 69999999999999999877655321                     112467888899888899999


Q ss_pred             HhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      .++  ++++||...-.+           .  ...++++.++|++.|+..+=|
T Consensus        60 ~l~~~~i~~VIDATHPf-----------A--~~is~~a~~ac~~~~ipyiR~   98 (248)
T PRK08057         60 YLREEGIDLVIDATHPY-----------A--AQISANAAAACRALGIPYLRL   98 (248)
T ss_pred             HHHHCCCCEEEECCCcc-----------H--HHHHHHHHHHHHHhCCcEEEE
Confidence            984  799999996442           2  345899999999999865444

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.05  E-value=0.0079  Score=61.39  Aligned_cols=42  Identities=33%  Similarity=0.416  Sum_probs=36.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      .+.+|||+||+|.+|..+++.+...|++|++++|+.++.+.+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~  203 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL  203 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            467899999999999999999999999999999987665543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=97.05  E-value=0.0099  Score=59.12  Aligned_cols=106  Identities=12%  Similarity=0.223  Sum_probs=68.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCch-------------------hHHHHHHHHHHhhhhccccccCCCCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~-------------------k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      +|||.| .|++|.++++.|+..|. ++++++.+.-                   |.+.+.+.++++           .+.
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~-----------np~   68 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDR-----------NPN   68 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHH-----------CCC
Confidence            489999 77899999999999994 7887776532                   222222222222           122


Q ss_pred             CCeEEEEecCCCHhhH-HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          142 EMLELVECDLEKRVQI-EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl-~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      -+++.+..++.+...+ ...++++|+||++..               |+..-..+-+.|...++ .||..++.|.
T Consensus        69 v~i~~~~~~i~~~~~~~~~f~~~~DvVi~a~D---------------n~~aR~~ln~~c~~~~i-plI~~g~~G~  127 (234)
T cd01484          69 CKVVPYQNKVGPEQDFNDTFFEQFHIIVNALD---------------NIIARRYVNGMLIFLIV-PLIESGTEGF  127 (234)
T ss_pred             CEEEEEeccCChhhhchHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcccCC
Confidence            3456666777553333 457799999999842               24445556677777775 7887666543

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.03  E-value=0.002  Score=65.80  Aligned_cols=89  Identities=18%  Similarity=0.207  Sum_probs=55.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|.|.|+ |.+|+.++..|+++|++|++++|++++.+.+.+.+......+..  .+......+.-+...+.-..++.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~   78 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA   78 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence            47999995 99999999999999999999999998887766554332111100  0000000000000001111346678


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||-|..
T Consensus        79 ~~~aD~Vi~avp   90 (288)
T PRK09260         79 VADADLVIEAVP   90 (288)
T ss_pred             hcCCCEEEEecc
Confidence            899999999975

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.02  E-value=0.009  Score=61.85  Aligned_cols=106  Identities=14%  Similarity=0.191  Sum_probs=70.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      +|||.| .|+||.++++.|+..| .++++++.+.                   .|.+.+.+.++++           ...
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-----------Np~   68 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-----------NPN   68 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-----------CCC
Confidence            489999 5889999999999999 4777777542                   2333334444333           112


Q ss_pred             CCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      -+++.+..++.+.....+.++++|+||++.-               |...-..+-+.|..+++ .||...+.|.
T Consensus        69 v~V~~~~~~i~~~~~~~~f~~~~DvVv~a~D---------------n~~ar~~in~~c~~~~i-p~I~~gt~G~  126 (312)
T cd01489          69 VKIVAYHANIKDPDFNVEFFKQFDLVFNALD---------------NLAARRHVNKMCLAADV-PLIESGTTGF  126 (312)
T ss_pred             CeEEEEeccCCCccchHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHCCC-CEEEEecCcc
Confidence            3556666777664334577899999999953               23344556677777775 6777666543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.01  E-value=0.0038  Score=65.60  Aligned_cols=95  Identities=17%  Similarity=0.179  Sum_probs=58.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|.|.||||++|+.|++.|.+++|   ++..+....+.-+.+                   ...+.++...++.   
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~-------------------~~~~~~~~v~~~~---   63 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKV-------------------TFEGRDYTVEELT---   63 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCee-------------------eecCceeEEEeCC---
Confidence            356899999999999999999999887   444443322110100                   0011233333332   


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        ...+.++|+||.+++..                .+..++..+.+.|+ ++|=.|+..
T Consensus        64 --~~~~~~~D~vf~a~p~~----------------~s~~~~~~~~~~g~-~VIDlS~~f  103 (344)
T PLN02383         64 --EDSFDGVDIALFSAGGS----------------ISKKFGPIAVDKGA-VVVDNSSAF  103 (344)
T ss_pred             --HHHHcCCCEEEECCCcH----------------HHHHHHHHHHhCCC-EEEECCchh
Confidence              13457899999998742                24556666666675 677777653

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=97.00  E-value=0.0085  Score=64.12  Aligned_cols=109  Identities=19%  Similarity=0.230  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|||.| .|++|..++..|+..|. ++++++.+.                   .|...+.+.++++          
T Consensus        40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~----------  108 (392)
T PRK07878         40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI----------  108 (392)
T ss_pred             HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh----------
Confidence            4456899999 67799999999999995 777777542                   1223333333332          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-+++.+..+++. +.+.++++++|+||.|..               |...-..+-++|.+.++ .||+.+..+.
T Consensus       109 -np~v~i~~~~~~i~~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~  168 (392)
T PRK07878        109 -NPLVNVRLHEFRLDP-SNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLAGK-PYVWGSIYRF  168 (392)
T ss_pred             -CCCcEEEEEeccCCh-hHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence             112234445555543 446778899999999853               12233345677888876 7888776654

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.00  E-value=0.0032  Score=66.83  Aligned_cols=75  Identities=19%  Similarity=0.199  Sum_probs=57.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ...+|+|+|+ |.+|+.+++.|.+.|.+|++++|+..+.+.+...+                 ..  .+..+..+.+.+.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----------------g~--~v~~~~~~~~~l~  225 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----------------GG--RIHTRYSNAYEIE  225 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----------------Cc--eeEeccCCHHHHH
Confidence            4567999986 89999999999999999999999987765543211                 11  1234556677788


Q ss_pred             HHhCCCcEEEEcccC
Q 009648          159 PALGNASVVICCIGA  173 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~  173 (530)
                      +.++++|+||++++.
T Consensus       226 ~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       226 DAVKRADLLIGAVLI  240 (370)
T ss_pred             HHHccCCEEEEcccc
Confidence            899999999999854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.99  E-value=0.0027  Score=60.83  Aligned_cols=40  Identities=25%  Similarity=0.179  Sum_probs=32.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|++|.-++..|++.||+|++++.++++.+.+.
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~   40 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALN   40 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHh
Confidence            6899997 999999999999999999999999998877765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.97  E-value=0.0048  Score=62.16  Aligned_cols=66  Identities=21%  Similarity=0.227  Sum_probs=44.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+|+|++|.+|+.+++.+.+. +++|.+++ ++.++....                          ...++...+++.
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--------------------------~~~~i~~~~dl~   55 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--------------------------GALGVAITDDLE   55 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--------------------------CCCCccccCCHH
Confidence            68999999999999999998875 68888755 444322110                          112332334466


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      +++.++|+||+++.
T Consensus        56 ~ll~~~DvVid~t~   69 (257)
T PRK00048         56 AVLADADVLIDFTT   69 (257)
T ss_pred             HhccCCCEEEECCC
Confidence            66677899988863

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=96.95  E-value=0.0015  Score=68.31  Aligned_cols=97  Identities=18%  Similarity=0.291  Sum_probs=72.0

Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcc-hHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCccccccchhHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGP-YRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~-~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~s  234 (530)
                      .+.+++.+|++.|.+.......... ..+++.....|+++..    +.+.+++|.|+|.+...       ...+..|.++
T Consensus       200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~-------~s~~f~Yfk~  272 (410)
T PF08732_consen  200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNA-------ISSMFPYFKT  272 (410)
T ss_pred             chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcch-------hhhhhhhhHH
Confidence            4457889999999765443332222 3666777777888777    67889999999987633       3446689999


Q ss_pred             HHHHHHHHHHC--C--CCEEEEEcCcccCCCcc
Q 009648          235 KRKAEEALIAS--G--LPYTIVRPGGMERPTDA  263 (530)
Q Consensus       235 K~~~E~~l~~~--g--l~~tIvRPg~V~Gp~~~  263 (530)
                      |.+.|+-+...  +  -+.+|+|||.+.|..+.
T Consensus       273 K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  273 KGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             HHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            99999999863  2  36999999999997654

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.95  E-value=0.0058  Score=69.00  Aligned_cols=73  Identities=14%  Similarity=0.157  Sum_probs=61.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++|+|.| .|.+|+.+++.|.++|++|+++++++++.+.+.+                   .+..++.||.+|++.+++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~  459 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-------------------YGYKVYYGDATQLELLRA  459 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHHh
Confidence            45799999 8899999999999999999999999987776532                   357889999999998876


Q ss_pred             H-hCCCcEEEEccc
Q 009648          160 A-LGNASVVICCIG  172 (530)
Q Consensus       160 a-~~~vD~VI~~Ag  172 (530)
                      + ++++|+||.+..
T Consensus       460 agi~~A~~vv~~~~  473 (601)
T PRK03659        460 AGAEKAEAIVITCN  473 (601)
T ss_pred             cCCccCCEEEEEeC
Confidence            5 578999998864

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.95  E-value=0.015  Score=56.38  Aligned_cols=80  Identities=16%  Similarity=0.263  Sum_probs=55.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC---chhH---------------HHHHHHHHHhhhhccccccCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRA---------------ENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~---~~k~---------------~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ....+|+|.|+ |.+|+.++..|++.|. +|++++++   .+.+               ..+.+.+.++           
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~i-----------   86 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEI-----------   86 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHH-----------
Confidence            45678999995 7799999999999997 79999887   2221               1122222222           


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHhCCCcEEEEc
Q 009648          139 QPVEMLELVECDLEKRVQIEPALGNASVVICC  170 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~  170 (530)
                      ...-+++.+..+++ .+.+.++++++|+||.|
T Consensus        87 np~~~i~~~~~~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        87 NPYTEIEAYDEKIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             CCCCEEEEeeeeCC-HhHHHHHhcCCCEEEEC
Confidence            11234555556664 45678889999999999

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.94  E-value=0.0089  Score=61.95  Aligned_cols=43  Identities=26%  Similarity=0.268  Sum_probs=37.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~  192 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL  192 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3467999999999999999998888999999999998776654

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.94  E-value=0.0035  Score=69.59  Aligned_cols=44  Identities=30%  Similarity=0.339  Sum_probs=38.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ..+++|+|+|+ |++|+.++..|+++|++|+++.|+.++.+.+.+
T Consensus       377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~  420 (529)
T PLN02520        377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD  420 (529)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            45689999998 799999999999999999999999887777654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.93  E-value=0.0044  Score=63.32  Aligned_cols=77  Identities=21%  Similarity=0.194  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|.| +|+.|+.++..|++.|. +|+++.|+.++.+.+.+++...              ..+  ..  +...+.
T Consensus       123 ~~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~--------------~~~--~~--~~~~~~  183 (282)
T TIGR01809       123 LAGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV--------------GVI--TR--LEGDSG  183 (282)
T ss_pred             cCCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc--------------Ccc--ee--ccchhh
Confidence            3567899999 58899999999999995 7999999999988877654311              111  11  111123


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +...+.++|+|||+...
T Consensus       184 ~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       184 GLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             hhhcccCCCEEEECCCC
Confidence            44566789999999764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.91  E-value=0.005  Score=63.11  Aligned_cols=80  Identities=16%  Similarity=0.158  Sum_probs=53.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc---hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~---~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++|||+|+ |+.+++++..|+..|. +|+++.|+.   ++.+.+.+++...            ....+.+  .++.+
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~------------~~~~~~~--~~~~~  186 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN------------TDCVVTV--TDLAD  186 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhc------------cCceEEE--echhh
Confidence            45679999995 6679999999999995 899999985   4666665543211            0011222  23333


Q ss_pred             HhhHHHHhCCCcEEEEccc
Q 009648          154 RVQIEPALGNASVVICCIG  172 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag  172 (530)
                      .+.+...+.++|+|||+.-
T Consensus       187 ~~~l~~~~~~aDivINaTp  205 (288)
T PRK12749        187 QQAFAEALASADILTNGTK  205 (288)
T ss_pred             hhhhhhhcccCCEEEECCC
Confidence            3335556778999999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.91  E-value=0.004  Score=63.81  Aligned_cols=71  Identities=24%  Similarity=0.293  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|+|+|. |.+|+.+++.|...|++|+++.|+.++.....+                   .+...+     +.+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-------------------~g~~~~-----~~~~  202 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-------------------MGLIPF-----PLNK  202 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeee-----cHHH
Confidence            356789999995 889999999999999999999999865443211                   111211     2345


Q ss_pred             HHHHhCCCcEEEEccc
Q 009648          157 IEPALGNASVVICCIG  172 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag  172 (530)
                      +.+.++++|+||++..
T Consensus       203 l~~~l~~aDiVint~P  218 (287)
T TIGR02853       203 LEEKVAEIDIVINTIP  218 (287)
T ss_pred             HHHHhccCCEEEECCC
Confidence            6778899999999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.91  E-value=0.0048  Score=63.12  Aligned_cols=46  Identities=15%  Similarity=0.110  Sum_probs=39.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ  126 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~  126 (530)
                      .++|.|.| .|.+|+.++..|+..|++|++++++++.++...+++.+
T Consensus         5 ~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~   50 (286)
T PRK07819          5 IQRVGVVG-AGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEK   50 (286)
T ss_pred             ccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH
Confidence            35899999 59999999999999999999999999988776555543

>PRK07877 hypothetical protein; Provisional

Probab=96.89  E-value=0.011  Score=67.78  Aligned_cols=106  Identities=18%  Similarity=0.192  Sum_probs=71.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCc------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ..+.+|+|.|+ | +|+.++..|++.|.  ++++++.+.                  .|...+.+.+.+.          
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i----------  172 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL----------  172 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH----------
Confidence            55678999999 7 99999999999994  888887743                  1223333333332          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       ...-+|+.+...++ .+.+.++++++|+||.|.-               |+..=..|-++|.++++ .+|+-++.
T Consensus       173 -np~i~v~~~~~~i~-~~n~~~~l~~~DlVvD~~D---------------~~~~R~~ln~~a~~~~i-P~i~~~~~  230 (722)
T PRK07877        173 -DPYLPVEVFTDGLT-EDNVDAFLDGLDVVVEECD---------------SLDVKVLLREAARARRI-PVLMATSD  230 (722)
T ss_pred             -CCCCEEEEEeccCC-HHHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcCC
Confidence             22345666666665 5778899999999999962               12222344567778776 67776654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=96.88  E-value=0.056  Score=59.67  Aligned_cols=217  Identities=16%  Similarity=0.085  Sum_probs=124.2

Q ss_pred             CCCCEEEEECCC-cHHHHHHHHHHHhCCCeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAt-G~IG~~Lv~~Ll~~G~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...+.+|||||+ |-||..++..|+..|..|++.+-+-++  .+.....+.+.          ......+-++.+|+...
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~----------a~~ga~LwvVpaN~~Sy  463 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARH----------ARYGAALWVVPANMGSY  463 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhh----------CCCCceEEEEeccccch
Confidence            346789999986 889999999999999999998765543  22222222221          12235677778887766


Q ss_pred             hhHHHHhC---------------------CCcEEEEcccCCCCc-cCC--C--CcchHhHHHHHHHHHHHHHhcC----C
Q 009648          155 VQIEPALG---------------------NASVVICCIGASEKE-VFD--I--TGPYRIDFQATKNLVDAATIAK----V  204 (530)
Q Consensus       155 ~sl~~a~~---------------------~vD~VI~~Ag~~~~~-~~~--~--~~~~~vNv~gt~~Ll~aa~~~g----v  204 (530)
                      .++..+++                     .-|.+|-+|+..... ..+  .  +..+++-+...++|+-..++.+    +
T Consensus       464 sDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v  543 (866)
T COG4982         464 SDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGV  543 (866)
T ss_pred             hhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCc
Confidence            65655551                     137778777754322 111  1  2335666667777777776553    2


Q ss_pred             C---EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH----C----CCCEEEEEcCcccCCCcccccccc-eee
Q 009648          205 N---HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA----S----GLPYTIVRPGGMERPTDAYKETHN-ITL  272 (530)
Q Consensus       205 ~---r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~----~----gl~~tIvRPg~V~Gp~~~~~~~~~-~~~  272 (530)
                      .   |+|+-.|-.-..+|       ....|+.+|...|.++..    +    .+.++--+.||+-|-+.   ..++ +++
T Consensus       544 ~~R~hVVLPgSPNrG~FG-------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL---Mg~Ndiiv  613 (866)
T COG4982         544 DTRLHVVLPGSPNRGMFG-------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL---MGHNDIIV  613 (866)
T ss_pred             ccceEEEecCCCCCCccC-------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc---cCCcchhH
Confidence            2   45555554332222       234599999999999864    1    23444556777766542   1111 111


Q ss_pred             cccCcccCCCCCHHHHHHHHHHHHhCCC----CCCCcEEEEeCCCC
Q 009648          273 SQEDTLFGGQVSNLQVAELLACMAKNRS----LSYCKVVEVIAETT  314 (530)
Q Consensus       273 ~~~~~~~~g~V~v~DVA~ai~~ll~~~~----~~~g~vynv~~~~~  314 (530)
                      ..-....-...+.+.+|.-++.++....    ...--.+++.++-.
T Consensus       614 ~aiEk~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~  659 (866)
T COG4982         614 AAIEKAGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLG  659 (866)
T ss_pred             HHHHHhCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccc
Confidence            1111111123456788887777765321    11234677777643

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.87  E-value=0.016  Score=59.06  Aligned_cols=100  Identities=18%  Similarity=0.225  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|+|+|++|.+|..+++.+...|++|++++++..+...+..    .         +      ... ..|..+.+..
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~---------~------~~~-~~~~~~~~~~  224 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE----L---------G------ADY-VIDYRKEDFV  224 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------C------CCe-EEecCChHHH
Confidence            346789999999999999999999999999999998876554321    1         1      111 1344443332


Q ss_pred             H---HHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          158 E---PAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~---~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .   ...  +++|++|+++|..                ....+++.++..  ++||.+++...
T Consensus       225 ~~~~~~~~~~~~d~~i~~~g~~----------------~~~~~~~~l~~~--G~~v~~~~~~~  269 (342)
T cd08266         225 REVRELTGKRGVDVVVEHVGAA----------------TWEKSLKSLARG--GRLVTCGATTG  269 (342)
T ss_pred             HHHHHHhCCCCCcEEEECCcHH----------------HHHHHHHHhhcC--CEEEEEecCCC
Confidence            2   222  3689999998731                122334444433  58999887643

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.86  E-value=0.0075  Score=67.42  Aligned_cols=73  Identities=25%  Similarity=0.238  Sum_probs=61.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +.+|+|.| .|.+|+++++.|.++|++|+++++++++.+.+.+                   .++..+.||.+|++.+++
T Consensus       417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-------------------~g~~~i~GD~~~~~~L~~  476 (558)
T PRK10669        417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-------------------RGIRAVLGNAANEEIMQL  476 (558)
T ss_pred             CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------CCCeEEEcCCCCHHHHHh
Confidence            35799999 8889999999999999999999999987766532                   467899999999988875


Q ss_pred             H-hCCCcEEEEccc
Q 009648          160 A-LGNASVVICCIG  172 (530)
Q Consensus       160 a-~~~vD~VI~~Ag  172 (530)
                      + ++++|+||-+.+
T Consensus       477 a~i~~a~~viv~~~  490 (558)
T PRK10669        477 AHLDCARWLLLTIP  490 (558)
T ss_pred             cCccccCEEEEEcC
Confidence            4 478998887754

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.86  E-value=0.0043  Score=65.32  Aligned_cols=36  Identities=36%  Similarity=0.313  Sum_probs=30.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~  115 (530)
                      +++|+|+||||++|++|++.|+++. .+++++.++..
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~   39 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASER   39 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChh
Confidence            4789999999999999999999875 48888866654

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.85  E-value=0.0058  Score=62.42  Aligned_cols=82  Identities=21%  Similarity=0.224  Sum_probs=54.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCC--------CCCeEEEEecCC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP--------VEMLELVECDLE  152 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~--------~~~v~~v~~Dl~  152 (530)
                      ++|.|.| +|.+|..++..|+..|++|++++++.+..+...+.++... +... ..+...        ..++.+      
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~i~~------   74 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLA-DRYV-RDLEATKEAPAEAALNRITL------   74 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHH-HHHH-HcCCCChhhhHHHHHcCeEE------
Confidence            5799998 6999999999999999999999999887776655433210 0000 000000        012221      


Q ss_pred             CHhhHHHHhCCCcEEEEccc
Q 009648          153 KRVQIEPALGNASVVICCIG  172 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag  172 (530)
                       ..+++++++++|+||.|..
T Consensus        75 -~~d~~~a~~~aDlVieavp   93 (287)
T PRK08293         75 -TTDLAEAVKDADLVIEAVP   93 (287)
T ss_pred             -eCCHHHHhcCCCEEEEecc
Confidence             1346677899999999975

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.85  E-value=0.02  Score=58.48  Aligned_cols=65  Identities=17%  Similarity=0.212  Sum_probs=49.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|.|.| .|.+|..+++.|++.|++|++.+|+..+.+.+.+                   .++.+       ..++.++
T Consensus         3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~-------~~~~~e~   55 (296)
T PRK11559          3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-------------------AGAET-------ASTAKAV   55 (296)
T ss_pred             ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            5799998 7999999999999999999999999877665432                   11111       1235567


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.|..
T Consensus        56 ~~~~d~vi~~vp   67 (296)
T PRK11559         56 AEQCDVIITMLP   67 (296)
T ss_pred             HhcCCEEEEeCC
Confidence            788999999964

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.84  E-value=0.0034  Score=67.70  Aligned_cols=73  Identities=33%  Similarity=0.488  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.+++.|...| .+|+++.|+.++...+.+.+            |     . ..+     +.++
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~------------g-----~-~~i-----~~~~  233 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL------------G-----G-EAV-----KFED  233 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------------C-----C-eEe-----eHHH
Confidence            55689999995 999999999999999 89999999988766554321            1     1 112     2245


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++.++|+||.|.+..
T Consensus       234 l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       234 LEEYLAEADIVISSTGAP  251 (417)
T ss_pred             HHHHHhhCCEEEECCCCC
Confidence            777888999999997743

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.84  E-value=0.01  Score=64.48  Aligned_cols=67  Identities=22%  Similarity=0.240  Sum_probs=49.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|+||+|.+|..+++.|.+.|++|++++|+.++...+...                  -++.+       ..+...+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~------------------~gv~~-------~~~~~e~   55 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE------------------LGVEY-------ANDNIDA   55 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH------------------cCCee-------ccCHHHH
Confidence            4799999999999999999999999999999987664433221                  11211       1124556


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      +.++|+||.|..
T Consensus        56 ~~~aDvVIlavp   67 (437)
T PRK08655         56 AKDADIVIISVP   67 (437)
T ss_pred             hccCCEEEEecC
Confidence            778999998864

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.84  E-value=0.023  Score=55.39  Aligned_cols=93  Identities=22%  Similarity=0.263  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|||.| .|.+|.+-++.|++.|++|++++.+.. ....+.+                  ..+++++..++..   
T Consensus         7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~------------------~~~i~~~~~~~~~---   64 (205)
T TIGR01470         7 LEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAE------------------QGGITWLARCFDA---   64 (205)
T ss_pred             cCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH------------------cCCEEEEeCCCCH---
Confidence            4578999999 788999999999999999999987654 2222211                  1578999888763   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                        ..+.++|.||-+.+..           ++    ...+...|++.|+  +|++.
T Consensus        65 --~dl~~~~lVi~at~d~-----------~l----n~~i~~~a~~~~i--lvn~~  100 (205)
T TIGR01470        65 --DILEGAFLVIAATDDE-----------EL----NRRVAHAARARGV--PVNVV  100 (205)
T ss_pred             --HHhCCcEEEEECCCCH-----------HH----HHHHHHHHHHcCC--EEEEC
Confidence              2357899999876531           12    3467777777664  45444

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.83  E-value=0.0035  Score=64.90  Aligned_cols=73  Identities=29%  Similarity=0.403  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|.|+ |.+|+.+++.|...| .+|++++|+.++...+.+.+            |      ..++     +.++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------------g------~~~~-----~~~~  231 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------------G------GNAV-----PLDE  231 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------------C------CeEE-----eHHH
Confidence            46789999996 999999999999876 78999999988877665421            1      1222     2345


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++.++|+||.+.+..
T Consensus       232 ~~~~l~~aDvVi~at~~~  249 (311)
T cd05213         232 LLELLNEADVVISATGAP  249 (311)
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            677788899999998753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.83  E-value=0.0035  Score=67.69  Aligned_cols=73  Identities=27%  Similarity=0.455  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.+++.|...|+ +|+++.|+.++...+.+.+            |           ++..+.++
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~------------g-----------~~~~~~~~  235 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF------------G-----------GEAIPLDE  235 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------------C-----------CcEeeHHH
Confidence            56789999995 9999999999999996 8999999988776654421            1           11223345


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++.++|+||.+.|..
T Consensus       236 ~~~~l~~aDvVI~aT~s~  253 (423)
T PRK00045        236 LPEALAEADIVISSTGAP  253 (423)
T ss_pred             HHHHhccCCEEEECCCCC
Confidence            677788999999998753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.82  E-value=0.0038  Score=67.20  Aligned_cols=75  Identities=13%  Similarity=0.294  Sum_probs=57.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+++|||.|+ |.+|+.++..|.+.| .+|+++.|+.++...+.+.+.                 ...     ....+
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~-----------------~~~-----~~~~~  234 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR-----------------NAS-----AHYLS  234 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc-----------------CCe-----EecHH
Confidence            356789999995 999999999999999 589999999888777654321                 111     22234


Q ss_pred             hHHHHhCCCcEEEEcccCC
Q 009648          156 QIEPALGNASVVICCIGAS  174 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~  174 (530)
                      .+...+..+|+||+|.+..
T Consensus       235 ~l~~~l~~aDiVI~aT~a~  253 (414)
T PRK13940        235 ELPQLIKKADIIIAAVNVL  253 (414)
T ss_pred             HHHHHhccCCEEEECcCCC
Confidence            5678889999999998854

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.81  E-value=0.017  Score=58.96  Aligned_cols=64  Identities=19%  Similarity=0.232  Sum_probs=49.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +|.|.| .|.+|..+++.|++.|++|++.+|+.++.+.+.+    .         |      ..       ...+..+++
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~----~---------g------~~-------~~~~~~~~~   53 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA----A---------G------AV-------TAETARQVT   53 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH----C---------C------Cc-------ccCCHHHHH
Confidence            378887 7999999999999999999999999877665432    0         1      11       112456778


Q ss_pred             CCCcEEEEccc
Q 009648          162 GNASVVICCIG  172 (530)
Q Consensus       162 ~~vD~VI~~Ag  172 (530)
                      +++|+||.|..
T Consensus        54 ~~aDivi~~vp   64 (291)
T TIGR01505        54 EQADVIFTMVP   64 (291)
T ss_pred             hcCCEEEEecC
Confidence            89999999964

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.80  E-value=0.0067  Score=62.06  Aligned_cols=78  Identities=22%  Similarity=0.271  Sum_probs=54.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|.|| |+.|++++-.|++.|. +|+++.|+.++.+.+.+.+...             .+...+...|+   ..
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~-------------~~~~~~~~~~~---~~  187 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA-------------VGREAVVGVDA---RG  187 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------------cCcceEEecCH---hH
Confidence            34679999995 8899999999999995 8999999999988887654321             01111111222   22


Q ss_pred             HHHHhCCCcEEEEccc
Q 009648          157 IEPALGNASVVICCIG  172 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag  172 (530)
                      +...+..+|+|||+..
T Consensus       188 ~~~~~~~~divINaTp  203 (283)
T PRK14027        188 IEDVIAAADGVVNATP  203 (283)
T ss_pred             HHHHHhhcCEEEEcCC
Confidence            3344567999999975

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.79  E-value=0.0044  Score=55.37  Aligned_cols=94  Identities=21%  Similarity=0.271  Sum_probs=57.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHh-CCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLK-LGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+|.|++|.+|+.+++.+.+ .|+++.+. +|+.+....  +.+.+.        -+.. ..++.+       .++++
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g--~d~g~~--------~~~~-~~~~~v-------~~~l~   62 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG--KDVGEL--------AGIG-PLGVPV-------TDDLE   62 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT--SBCHHH--------CTSS-T-SSBE-------BS-HH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc--chhhhh--------hCcC-Cccccc-------chhHH
Confidence            4899999999999999999999 67886664 455421110  000000        0100 011111       24578


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      ++++.+|+||.+.                +-.++...++.|.++|+ ++|.
T Consensus        63 ~~~~~~DVvIDfT----------------~p~~~~~~~~~~~~~g~-~~Vi   96 (124)
T PF01113_consen   63 ELLEEADVVIDFT----------------NPDAVYDNLEYALKHGV-PLVI   96 (124)
T ss_dssp             HHTTH-SEEEEES-----------------HHHHHHHHHHHHHHT--EEEE
T ss_pred             HhcccCCEEEEcC----------------ChHHhHHHHHHHHhCCC-CEEE
Confidence            8888899999995                24567888899998886 5553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.79  E-value=0.0066  Score=62.57  Aligned_cols=43  Identities=16%  Similarity=0.057  Sum_probs=37.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS  123 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~  123 (530)
                      .++|.|.| .|.+|..++..|++.|++|++++++.++.+.+.+.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~   46 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGV   46 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            46899998 69999999999999999999999999887776654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.78  E-value=0.0058  Score=62.90  Aligned_cols=70  Identities=20%  Similarity=0.309  Sum_probs=52.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|. |.+|+.++..|.+.|.+|++++|+..+......                   -++.++     ..+.+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-------------------~G~~~~-----~~~~l  204 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE-------------------MGLSPF-----HLSEL  204 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------cCCeee-----cHHHH
Confidence            35789999995 889999999999999999999999765433211                   122222     23456


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      .+.+.++|+||+++.
T Consensus       205 ~~~l~~aDiVI~t~p  219 (296)
T PRK08306        205 AEEVGKIDIIFNTIP  219 (296)
T ss_pred             HHHhCCCCEEEECCC
Confidence            778889999999864

>PRK07411 hypothetical protein; Validated

Probab=96.78  E-value=0.017  Score=61.82  Aligned_cols=109  Identities=19%  Similarity=0.176  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|..++..|+..|. ++++++.+.                   .|...+.+.++++          
T Consensus        36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~----------  104 (390)
T PRK07411         36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEI----------  104 (390)
T ss_pred             HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHH----------
Confidence            4456899999 67799999999999994 777776542                   2333334444433          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       ...-+|+.+...++. +...+.+.++|+||.|...               ...-..|-++|.+.++ .+|+.+..+.
T Consensus       105 -np~v~v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d~---------------~~~r~~ln~~~~~~~~-p~v~~~~~g~  164 (390)
T PRK07411        105 -NPYCQVDLYETRLSS-ENALDILAPYDVVVDGTDN---------------FPTRYLVNDACVLLNK-PNVYGSIFRF  164 (390)
T ss_pred             -CCCCeEEEEecccCH-HhHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEEccC
Confidence             122345555555554 4566788999999999642               2223335567777775 7887665543

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.77  E-value=0.0058  Score=65.88  Aligned_cols=40  Identities=15%  Similarity=0.065  Sum_probs=36.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      .++|.|.| .|++|..++..|+++||+|++++|++++.+.+
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            46899998 79999999999999999999999999887764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.77  E-value=0.014  Score=59.65  Aligned_cols=44  Identities=27%  Similarity=0.218  Sum_probs=38.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ..+.+|||.||+|.+|..+++.+...|.+|++++++.++.+.+.
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~  185 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK  185 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            34679999999999999999999899999999999887766553

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.73  E-value=0.017  Score=49.77  Aligned_cols=89  Identities=20%  Similarity=0.300  Sum_probs=61.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++|||+|| |.+|.+-++.|++.|.+|+++....   ... +                   +.+.+..-++      
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~-~-------------------~~i~~~~~~~------   54 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFS-E-------------------GLIQLIRREF------   54 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHH-H-------------------TSCEEEESS-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhh-h-------------------hHHHHHhhhH------
Confidence            56789999996 8999999999999999999999886   111 0                   3455554443      


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      ...+.++|.||.+.+.               -.....+.+.|++.++  +|++...
T Consensus        55 ~~~l~~~~lV~~at~d---------------~~~n~~i~~~a~~~~i--~vn~~D~   93 (103)
T PF13241_consen   55 EEDLDGADLVFAATDD---------------PELNEAIYADARARGI--LVNVVDD   93 (103)
T ss_dssp             GGGCTTESEEEE-SS----------------HHHHHHHHHHHHHTTS--EEEETT-
T ss_pred             HHHHhhheEEEecCCC---------------HHHHHHHHHHHhhCCE--EEEECCC
Confidence            2447889999977542               2234667788887765  7776653

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.73  E-value=0.0064  Score=51.16  Aligned_cols=66  Identities=29%  Similarity=0.303  Sum_probs=48.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC---CeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG---FRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|.|.| +|.+|.+|++.|++.|   ++|+++ .|++++.+.+.+++                  .+.+...      +.
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~------------------~~~~~~~------~~   55 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY------------------GVQATAD------DN   55 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC------------------TTEEESE------EH
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh------------------ccccccC------Ch
Confidence            577885 9999999999999999   999965 99999888775421                  1222221      25


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      .++++.+|+||.|.-
T Consensus        56 ~~~~~~advvilav~   70 (96)
T PF03807_consen   56 EEAAQEADVVILAVK   70 (96)
T ss_dssp             HHHHHHTSEEEE-S-
T ss_pred             HHhhccCCEEEEEEC
Confidence            666778999999963

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.73  E-value=0.0066  Score=63.89  Aligned_cols=78  Identities=21%  Similarity=0.292  Sum_probs=53.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...++.|||.||+|.+|.++++.+...|+.+++.+++.++.+...+    +         |      .. ...|..+++.
T Consensus       155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~----l---------G------Ad-~vvdy~~~~~  214 (347)
T KOG1198|consen  155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKK----L---------G------AD-EVVDYKDENV  214 (347)
T ss_pred             cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHH----c---------C------Cc-EeecCCCHHH
Confidence            3557899999999999999999988889555556666655554322    1         1      11 1257777554


Q ss_pred             HHHHhC----CCcEEEEcccCC
Q 009648          157 IEPALG----NASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~----~vD~VI~~Ag~~  174 (530)
                      ++...+    ++|+|+.|+|..
T Consensus       215 ~e~~kk~~~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  215 VELIKKYTGKGVDVVLDCVGGS  236 (347)
T ss_pred             HHHHHhhcCCCccEEEECCCCC
Confidence            444443    699999999863

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.71  E-value=0.016  Score=60.78  Aligned_cols=43  Identities=28%  Similarity=0.296  Sum_probs=37.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||.||+|.||..+++.+...|.+|++++++.++.+.+
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            3467999999999999999988888999999999988776654

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.71  E-value=0.018  Score=58.88  Aligned_cols=105  Identities=16%  Similarity=0.221  Sum_probs=68.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|||.| .|++|..+++.|+..| .+|++++.+.                   .|.+...+.++++          
T Consensus        17 L~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eL----------   85 (286)
T cd01491          17 LQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAEL----------   85 (286)
T ss_pred             HhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHH----------
Confidence            4456899999 5669999999999999 4787777542                   2333444444443          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-+++.+..++ +    .+.+.++|+||.+..               |...-..+-++|+++++ .||+..+.|.
T Consensus        86 -Np~V~V~~~~~~~-~----~~~l~~fdvVV~~~~---------------~~~~~~~in~~c~~~~i-pfI~a~~~G~  141 (286)
T cd01491          86 -NPYVPVTVSTGPL-T----TDELLKFQVVVLTDA---------------SLEDQLKINEFCHSPGI-KFISADTRGL  141 (286)
T ss_pred             -CCCCEEEEEeccC-C----HHHHhcCCEEEEecC---------------CHHHHHHHHHHHHHcCC-EEEEEecccc
Confidence             1123344444442 2    245678999999853               13334556688888886 7888877655

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.71  E-value=0.0066  Score=58.87  Aligned_cols=44  Identities=23%  Similarity=0.278  Sum_probs=37.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ...+|+|+|+|. |.+|+++++.|.+.|++|++.+++.++...+.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~   68 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAA   68 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            356789999996 78999999999999999999999887665543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14852 hypothetical protein; Provisional

Probab=96.69  E-value=0.024  Score=66.40  Aligned_cols=111  Identities=14%  Similarity=0.174  Sum_probs=73.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|..++..|+..|. ++++++.+.                   .|...+.+.++++          
T Consensus       330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I----------  398 (989)
T PRK14852        330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV----------  398 (989)
T ss_pred             HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH----------
Confidence            5567899999 77899999999999994 666666532                   2334444444433          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-+|+.+...+ +.+.+.+.++++|+||.|.-..             .+..-..+.+.|.+.|+ .||+.+..+.
T Consensus       399 -NP~v~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~-------------~~~~rr~l~~~c~~~~I-P~I~ag~~G~  460 (989)
T PRK14852        399 -NPFLDIRSFPEGV-AAETIDAFLKDVDLLVDGIDFF-------------ALDIRRRLFNRALELGI-PVITAGPLGY  460 (989)
T ss_pred             -CCCCeEEEEecCC-CHHHHHHHhhCCCEEEECCCCc-------------cHHHHHHHHHHHHHcCC-CEEEeecccc
Confidence             1223455555555 4566888899999999885321             12233566777888887 6887666543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.67  E-value=0.058  Score=58.93  Aligned_cols=75  Identities=13%  Similarity=0.150  Sum_probs=53.4

Q ss_pred             CCCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      ..+++||||+|                ||..|.+|++++..+|++|+++.-... .                     ...
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~---------------------~~p  311 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L---------------------ADP  311 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C---------------------CCC
Confidence            67899999986                799999999999999999999874321 0                     112


Q ss_pred             CCeEEEEecCCCHhhHHHHhC---CCcEEEEcccCCCC
Q 009648          142 EMLELVECDLEKRVQIEPALG---NASVVICCIGASEK  176 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~~a~~---~vD~VI~~Ag~~~~  176 (530)
                      .+++++..+  ..+++.+++.   .+|++|++|+..++
T Consensus       312 ~~v~~i~V~--ta~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        312 QGVKVIHVE--SARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             CCceEEEec--CHHHHHHHHHhhCCCCEEEEeccccce
Confidence            456666543  4444443332   37999999996544

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.67  E-value=0.018  Score=60.04  Aligned_cols=99  Identities=24%  Similarity=0.335  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+.+|||+||+|.+|..+++.+...|+.|++++.+.++.+.+.+    +         |     .-++  .|..+.   
T Consensus       141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~----l---------G-----Ad~v--i~y~~~~~~  200 (326)
T COG0604         141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKE----L---------G-----ADHV--INYREEDFV  200 (326)
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHh----c---------C-----CCEE--EcCCcccHH
Confidence            347899999999999999999999999777777777766553322    1         1     1111  223332   


Q ss_pred             hhHHHHhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          155 VQIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       155 ~sl~~a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +.+.++..  ++|+|+++.|..                .....++.++..  ++++.+...+
T Consensus       201 ~~v~~~t~g~gvDvv~D~vG~~----------------~~~~~l~~l~~~--G~lv~ig~~~  244 (326)
T COG0604         201 EQVRELTGGKGVDVVLDTVGGD----------------TFAASLAALAPG--GRLVSIGALS  244 (326)
T ss_pred             HHHHHHcCCCCceEEEECCCHH----------------HHHHHHHHhccC--CEEEEEecCC
Confidence            23444443  699999998742                122244444443  5888887765

>PRK14851 hypothetical protein; Provisional

Probab=96.67  E-value=0.029  Score=64.00  Aligned_cols=108  Identities=13%  Similarity=0.217  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|+||+.++..|++.|. ++++++.+.                   .|...+.+.+.++          
T Consensus        41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i----------  109 (679)
T PRK14851         41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI----------  109 (679)
T ss_pred             HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh----------
Confidence            4567899999 78899999999999994 666666532                   2333333333333          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                       .+.-+|+.+...++ .+.+..+++++|+||+|.-..             .+..-..|.+.|.+.++ .+|+.+.
T Consensus       110 -nP~~~I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~-------------~~~~r~~l~~~c~~~~i-P~i~~g~  168 (679)
T PRK14851        110 -NPFLEITPFPAGIN-ADNMDAFLDGVDVVLDGLDFF-------------QFEIRRTLFNMAREKGI-PVITAGP  168 (679)
T ss_pred             -CCCCeEEEEecCCC-hHHHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHCCC-CEEEeec
Confidence             22345666766775 456788899999999885211             02223456677888887 5766553

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.64  E-value=0.016  Score=59.90  Aligned_cols=41  Identities=29%  Similarity=0.239  Sum_probs=35.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~  121 (530)
                      .+|||.||+|.+|..+++.+...|. +|+++++++++.+.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~  197 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK  197 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence            7999999999999999988888898 8999999887766543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.62  E-value=0.024  Score=58.96  Aligned_cols=41  Identities=22%  Similarity=0.293  Sum_probs=34.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      .+.+|+|+|+ |.||...++.+...|. +|+++++++++.+.+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a  210 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA  210 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence            4679999986 9999999998888897 688899998776654

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.62  E-value=0.0099  Score=62.22  Aligned_cols=95  Identities=23%  Similarity=0.184  Sum_probs=59.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .++++|.|.||||++|+.|++.|.++.   .++..+....+.-+.+.     +         +   ...+.+-  |+.  
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-----~---------~---~~~~~v~--~~~--   60 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-----F---------G---GKSVTVQ--DAA--   60 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-----E---------C---CcceEEE--eCc--
Confidence            356799999999999999999999853   47776654432111100     0         0   0112221  221  


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                         ...|.++|+||.+++..                .+..++..+.+.|+ ++|=.|+.
T Consensus        61 ---~~~~~~~Dvvf~a~p~~----------------~s~~~~~~~~~~g~-~VIDlS~~   99 (336)
T PRK08040         61 ---EFDWSQAQLAFFVAGRE----------------ASAAYAEEATNAGC-LVIDSSGL   99 (336)
T ss_pred             ---hhhccCCCEEEECCCHH----------------HHHHHHHHHHHCCC-EEEECChH
Confidence               12357899999998642                35667777777776 67777764

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=96.62  E-value=0.034  Score=60.19  Aligned_cols=41  Identities=24%  Similarity=0.131  Sum_probs=35.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ..|+|.|.| .|++|..++..|++ ||+|+++++++++.+.+.
T Consensus         5 ~~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~   45 (425)
T PRK15182          5 DEVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK   45 (425)
T ss_pred             CCCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH
Confidence            347899998 89999999999776 799999999999888765

>PRK06153 hypothetical protein; Provisional

Probab=96.60  E-value=0.025  Score=59.86  Aligned_cols=102  Identities=15%  Similarity=0.155  Sum_probs=66.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc----------------------hhHHHHHHHHHHhhhhcccc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV----------------------QRAENLVQSVKQMKLDGELA  134 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~----------------------~k~~~l~~~~~~~~l~~~~~  134 (530)
                      ....+|+|.| .|++|++++..|++.|. ++++++.+.                      .|.+.+.+++.++       
T Consensus       174 L~~~~VaIVG-~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~i-------  245 (393)
T PRK06153        174 LEGQRIAIIG-LGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNM-------  245 (393)
T ss_pred             HhhCcEEEEc-CCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHh-------
Confidence            4567999999 67799999999999994 777776542                      1222222222222       


Q ss_pred             ccCCCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          135 NKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       135 ~~g~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                            ..+++.+...+ +.+.+. .+.++|+||.|..               |..+-..|.++|.+.++ .||.++
T Consensus       246 ------n~~I~~~~~~I-~~~n~~-~L~~~DiV~dcvD---------------n~~aR~~ln~~a~~~gI-P~Id~G  298 (393)
T PRK06153        246 ------RRGIVPHPEYI-DEDNVD-ELDGFTFVFVCVD---------------KGSSRKLIVDYLEALGI-PFIDVG  298 (393)
T ss_pred             ------CCeEEEEeecC-CHHHHH-HhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEee
Confidence                  23566665555 545444 6789999999974               23334446677777776 577654

>PRK06849 hypothetical protein; Provisional

Probab=96.60  E-value=0.032  Score=59.40  Aligned_cols=39  Identities=13%  Similarity=0.102  Sum_probs=35.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k  116 (530)
                      .++|+|||||+...+|..+++.|.+.|++|++++.+...
T Consensus         2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~   40 (389)
T PRK06849          2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP   40 (389)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence            457899999999999999999999999999999988643

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.60  E-value=0.019  Score=63.27  Aligned_cols=43  Identities=26%  Similarity=0.195  Sum_probs=37.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ..+.+|+|+| .|-+|...+..+...|.+|+++++++++.+...
T Consensus       163 ~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae  205 (509)
T PRK09424        163 VPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE  205 (509)
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            3477999999 789999999999999999999999998766543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.58  E-value=0.016  Score=65.67  Aligned_cols=73  Identities=22%  Similarity=0.249  Sum_probs=61.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++|+|.| .|.+|+.+++.|.++|++++++++++++.+.+.+                   .+..++.||.+|.+.+++
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~  459 (621)
T PRK03562        400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLES  459 (621)
T ss_pred             cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------cCCeEEEEeCCCHHHHHh
Confidence            46799999 7889999999999999999999999988776532                   357889999999998775


Q ss_pred             -HhCCCcEEEEccc
Q 009648          160 -ALGNASVVICCIG  172 (530)
Q Consensus       160 -a~~~vD~VI~~Ag  172 (530)
                       -++++|.||.+..
T Consensus       460 agi~~A~~vvv~~~  473 (621)
T PRK03562        460 AGAAKAEVLINAID  473 (621)
T ss_pred             cCCCcCCEEEEEeC
Confidence             4478999998864

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.57  E-value=0.0077  Score=56.85  Aligned_cols=38  Identities=18%  Similarity=0.131  Sum_probs=33.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      ...+++|+|+|+++.+|..+++.|.++|.+|+++.|+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            46789999999877889999999999999999998863

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.57  E-value=0.014  Score=61.50  Aligned_cols=113  Identities=23%  Similarity=0.184  Sum_probs=69.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeE-EEEec-----CCCH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-LVECD-----LEKR  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~-~v~~D-----l~d~  154 (530)
                      |+|.|.| +|++|.-..--|++.||+|++++.++.|.+.+++...    +        ...++++ +++-+     |.=.
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~----P--------I~EpgLe~ll~~~~~~gRl~fT   67 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGIS----P--------IYEPGLEELLKENLASGRLRFT   67 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCC----C--------CcCccHHHHHHhccccCcEEEE
Confidence            6799999 9999999999999999999999999999887653110    0        0001111 11111     1112


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      .+.+.++++.|++|-+.|.......      ..|+..+..+++...++..+ ++|.+=|
T Consensus        68 td~~~a~~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          68 TDYEEAVKDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             cCHHHHHhcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            3477888999999999985332211      12344455555555444222 4544433

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.57  E-value=0.028  Score=58.66  Aligned_cols=97  Identities=19%  Similarity=0.191  Sum_probs=67.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+. ++|...++.+...|.+|++++|+++|.+...+    +              +.-+++...  |.+.+
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~----l--------------GAd~~i~~~--~~~~~  223 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK----L--------------GADHVINSS--DSDAL  223 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH----h--------------CCcEEEEcC--Cchhh
Confidence            457899999976 89999999999999999999999998776543    1              122333322  54545


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +..-+.+|+||++++ . .              .....+++++..  +++|.+.-.
T Consensus       224 ~~~~~~~d~ii~tv~-~-~--------------~~~~~l~~l~~~--G~~v~vG~~  261 (339)
T COG1064         224 EAVKEIADAIIDTVG-P-A--------------TLEPSLKALRRG--GTLVLVGLP  261 (339)
T ss_pred             HHhHhhCcEEEECCC-h-h--------------hHHHHHHHHhcC--CEEEEECCC
Confidence            544445999999987 2 1              123445555554  378887754

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.56  E-value=0.027  Score=55.31  Aligned_cols=100  Identities=23%  Similarity=0.246  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|||+|+++ +|..+++.+...|.+|++++++.++.+.+.+    +         |     .-.+  .|..+.+..
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~---------g-----~~~~--~~~~~~~~~  191 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE----L---------G-----ADHV--IDYKEEDLE  191 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH----h---------C-----Ccee--ccCCcCCHH
Confidence            4567999999999 9999999999999999999998766554321    1         1     1112  233322222


Q ss_pred             HHH----hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          158 EPA----LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~~a----~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      ..+    -+++|+||++++..               .....+++.++..  ++||.++....
T Consensus       192 ~~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~l~~~--G~~v~~~~~~~  236 (271)
T cd05188         192 EELRLTGGGGADVVIDAVGGP---------------ETLAQALRLLRPG--GRIVVVGGTSG  236 (271)
T ss_pred             HHHHHhcCCCCCEEEECCCCH---------------HHHHHHHHhcccC--CEEEEEccCCC
Confidence            221    25699999998741               1234445555443  47998887543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN00203 glutamyl-tRNA reductase

Probab=96.55  E-value=0.0098  Score=65.75  Aligned_cols=76  Identities=22%  Similarity=0.305  Sum_probs=56.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.+++.|+..|+ +|+++.|+.++...+.+.+                 +++.+..   ...++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-----------------~g~~i~~---~~~~d  322 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-----------------PDVEIIY---KPLDE  322 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-----------------CCCceEe---ecHhh
Confidence            45789999996 9999999999999996 7999999998887765422                 1111111   22334


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +..++.++|+||.+.+..
T Consensus       323 l~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        323 MLACAAEADVVFTSTSSE  340 (519)
T ss_pred             HHHHHhcCCEEEEccCCC
Confidence            667888999999997643

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.53  E-value=0.048  Score=56.04  Aligned_cols=68  Identities=16%  Similarity=0.191  Sum_probs=50.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|.| .|.+|..+++.|+++||+|++.+|+.++.+.+.+.             +      +.    ...+.+++.+.
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~-------------g------~~----~~~s~~~~~~~   56 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKED-------------R------TT----GVANLRELSQR   56 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc-------------C------Cc----ccCCHHHHHhh
Confidence            4799999 79999999999999999999999999877765431             1      11    11244455556


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      +..+|+||.+.-
T Consensus        57 ~~~~dvIi~~vp   68 (298)
T TIGR00872        57 LSAPRVVWVMVP   68 (298)
T ss_pred             cCCCCEEEEEcC
Confidence            677899998853

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.53  E-value=0.028  Score=57.45  Aligned_cols=66  Identities=27%  Similarity=0.314  Sum_probs=49.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|.++| .|-.|..++..|+++||+|++.+|++++...+..   +         .|      ...       .++..++
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~---~---------~G------a~~-------a~s~~ea   54 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLA---A---------AG------ATV-------AASPAEA   54 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHH---H---------cC------Ccc-------cCCHHHH
Confidence            3688888 9999999999999999999999999988433221   1         12      111       2345677


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      .+++|+||.|..
T Consensus        55 a~~aDvVitmv~   66 (286)
T COG2084          55 AAEADVVITMLP   66 (286)
T ss_pred             HHhCCEEEEecC
Confidence            889999999975

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.51  E-value=0.022  Score=57.83  Aligned_cols=71  Identities=21%  Similarity=0.305  Sum_probs=47.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC--CCeEEE-EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL--GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~-~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +.+++|.|.| .|.||+.+++.|.+.  |++|.+ .+|+.++.+.+.+.   +              +...+       .
T Consensus         4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~---~--------------g~~~~-------~   58 (271)
T PRK13302          4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG---L--------------RRPPP-------V   58 (271)
T ss_pred             CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh---c--------------CCCcc-------c
Confidence            3457899999 799999999999874  788874 56676665544321   0              00000       1


Q ss_pred             hhHHHHhCCCcEEEEcccC
Q 009648          155 VQIEPALGNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~  173 (530)
                      .++++++.++|+||-|+..
T Consensus        59 ~~~eell~~~D~Vvi~tp~   77 (271)
T PRK13302         59 VPLDQLATHADIVVEAAPA   77 (271)
T ss_pred             CCHHHHhcCCCEEEECCCc
Confidence            2345556789999999863

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.51  E-value=0.005  Score=61.83  Aligned_cols=117  Identities=21%  Similarity=0.152  Sum_probs=73.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEE---EEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~---~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..+.+|.|.||.|+||.-| ..|++....|.   +.+-...  ......+.               +-+-......+.-.
T Consensus        26 ~~~~KVAvlGAaGGIGQPL-SLLlK~np~Vs~LaLYDi~~~--~GVaaDlS---------------HI~T~s~V~g~~g~   87 (345)
T KOG1494|consen   26 QRGLKVAVLGAAGGIGQPL-SLLLKLNPLVSELALYDIANT--PGVAADLS---------------HINTNSSVVGFTGA   87 (345)
T ss_pred             cCcceEEEEecCCccCccH-HHHHhcCcccceeeeeecccC--Cccccccc---------------ccCCCCceeccCCh
Confidence            3456899999999999999 55666664433   2222211  11000000               00111112333445


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      +.++++++++|+||--||...+..-..+..|.+|..-.+.|..++.+.--+ ++.+||-
T Consensus        88 ~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen   88 DGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             hHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            689999999999999999765544444567899999999999998887433 4445553

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.49  E-value=0.0086  Score=56.83  Aligned_cols=71  Identities=21%  Similarity=0.251  Sum_probs=51.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+++++.|..-|.+|++++|..........                   ..+        ...+
T Consensus        33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------------------~~~--------~~~~   84 (178)
T PF02826_consen   33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------------------FGV--------EYVS   84 (178)
T ss_dssp             -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------------------TTE--------EESS
T ss_pred             ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------------------ccc--------eeee
Confidence            46789999999 7999999999999999999999999875441110                   111        1234


Q ss_pred             HHHHhCCCcEEEEcccCCC
Q 009648          157 IEPALGNASVVICCIGASE  175 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~  175 (530)
                      +.+++..+|+|+++...+.
T Consensus        85 l~ell~~aDiv~~~~plt~  103 (178)
T PF02826_consen   85 LDELLAQADIVSLHLPLTP  103 (178)
T ss_dssp             HHHHHHH-SEEEE-SSSST
T ss_pred             hhhhcchhhhhhhhhcccc
Confidence            7788889999999986543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.47  E-value=0.033  Score=58.22  Aligned_cols=34  Identities=32%  Similarity=0.329  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~  113 (530)
                      .+.+|+|+|+ |.||...+..+...|.+|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            4679999985 999999998888889999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.45  E-value=0.009  Score=58.01  Aligned_cols=65  Identities=22%  Similarity=0.198  Sum_probs=44.9

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      +..+||+|.||..|++.|.+.||+|++..|+.++ ...+.+.+.                +.        ....+..++.
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~----------------~~--------i~~~~~~dA~   58 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG----------------PL--------ITGGSNEDAA   58 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc----------------cc--------cccCChHHHH
Confidence            4445559999999999999999999999766554 443332211                11        1223466778


Q ss_pred             CCCcEEEEcc
Q 009648          162 GNASVVICCI  171 (530)
Q Consensus       162 ~~vD~VI~~A  171 (530)
                      +.+|+||-..
T Consensus        59 ~~aDVVvLAV   68 (211)
T COG2085          59 ALADVVVLAV   68 (211)
T ss_pred             hcCCEEEEec
Confidence            8899998875

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.45  E-value=0.0085  Score=57.10  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=37.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ  126 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~  126 (530)
                      +|.|.|| |.+|+.++..++..|++|++++++++.++...+++++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            5899996 9999999999999999999999999887776666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.0095  Score=60.91  Aligned_cols=37  Identities=19%  Similarity=0.143  Sum_probs=33.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~  113 (530)
                      ...+++|+|.|++|.+|+.++..|+++|..|+++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            4678999999999999999999999999999998873

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.43  E-value=0.014  Score=60.66  Aligned_cols=86  Identities=20%  Similarity=0.153  Sum_probs=55.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++|.|.| +|-+|+.++..|+..|++|++.+++++..+.+...+.+.. .... ..+...    ......+.-..++++
T Consensus         7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~-~~~~-~~~~~~----~~~~~~i~~~~~l~~   79 (321)
T PRK07066          7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAW-PALE-RQGLAP----GASPARLRFVATIEA   79 (321)
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHH-HHHH-HcCCCh----hhHHhhceecCCHHH
Confidence            46899999 6999999999999999999999999887665544443210 0000 001000    000011111234778


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++++|.||-|+-
T Consensus        80 av~~aDlViEavp   92 (321)
T PRK07066         80 CVADADFIQESAP   92 (321)
T ss_pred             HhcCCCEEEECCc
Confidence            8899999999964

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.42  E-value=0.024  Score=62.52  Aligned_cols=85  Identities=14%  Similarity=0.033  Sum_probs=53.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEE-EEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-VECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~-v~~Dl~d~~sl~  158 (530)
                      .++|.|+| +|.+|+.++..|+++|++|++.+|++++.+.+.+.+....-..    ...   ..... ..+.+.-.+++.
T Consensus         4 i~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~----~~l---~~~~~~~~g~i~~~~~~~   75 (495)
T PRK07531          4 IMKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAY----AML---TDAPLPPEGRLTFCASLA   75 (495)
T ss_pred             cCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHH----hhh---ccchhhhhhceEeeCCHH
Confidence            35799997 9999999999999999999999999988766543222110000    000   00000 001111123466


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ++++++|+||-|.-
T Consensus        76 ea~~~aD~Vieavp   89 (495)
T PRK07531         76 EAVAGADWIQESVP   89 (495)
T ss_pred             HHhcCCCEEEEcCc
Confidence            78899999998864

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.41  E-value=0.011  Score=61.35  Aligned_cols=69  Identities=22%  Similarity=0.308  Sum_probs=52.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+.+++.|...|++|++++|...+.                        .++..+    ...++
T Consensus       133 ~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~------------------------~~~~~~----~~~~~  183 (312)
T PRK15469        133 HREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW------------------------PGVQSF----AGREE  183 (312)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC------------------------CCceee----ccccc
Confidence            35678999999 99999999999999999999999865321                        111111    12356


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.++++++|+|+.+...+
T Consensus       184 l~e~l~~aDvvv~~lPlt  201 (312)
T PRK15469        184 LSAFLSQTRVLINLLPNT  201 (312)
T ss_pred             HHHHHhcCCEEEECCCCC
Confidence            889999999999997643

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=96.40  E-value=0.12  Score=56.33  Aligned_cols=90  Identities=12%  Similarity=0.140  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           78 KDDNLAFVAGAT---GKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        78 ~~~k~VLVTGAt---G~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ...++|.|.|++   |.+|..+++.|.+.||  +|+.+..+....                        .++.+      
T Consensus         5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i------------------------~G~~~------   54 (447)
T TIGR02717         5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI------------------------LGVKA------   54 (447)
T ss_pred             cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc------------------------CCccc------
Confidence            456789999998   7799999999999997  677665433210                        11111      


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       ..++.++-..+|.+|-+..                -..+..+++.|.+.|++.+|.+|+..
T Consensus        55 -~~sl~~lp~~~Dlavi~vp----------------~~~~~~~l~e~~~~gv~~~vi~s~gf   99 (447)
T TIGR02717        55 -YPSVLEIPDPVDLAVIVVP----------------AKYVPQVVEECGEKGVKGAVVITAGF   99 (447)
T ss_pred             -cCCHHHCCCCCCEEEEecC----------------HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence             2234444467898887754                23467788889999999998888753

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.40  E-value=0.036  Score=55.63  Aligned_cols=97  Identities=19%  Similarity=0.170  Sum_probs=70.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||+|||+ =|+.|++.|.++|+ |++.+-..-....+.                 .....+.++.+-+.|.+.+.+.
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~-----------------~~~~~~~v~~G~lg~~~~l~~~   61 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLK-----------------PELPGLEVRVGRLGDEEGLAEF   61 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhc-----------------cccCCceEEECCCCCHHHHHHH
Confidence            6899999998 69999999999998 665443322111110                 1124678888888888999998


Q ss_pred             h--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          161 L--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       161 ~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      +  .+++.||...-.+           .  ...++|+.++|++.|+..+-|
T Consensus        62 l~~~~i~~vIDATHPf-----------A--~~is~na~~a~~~~~ipylR~   99 (249)
T PF02571_consen   62 LRENGIDAVIDATHPF-----------A--AEISQNAIEACRELGIPYLRF   99 (249)
T ss_pred             HHhCCCcEEEECCCch-----------H--HHHHHHHHHHHhhcCcceEEE
Confidence            8  4799999996432           2  345899999999999864444

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.39  E-value=0.018  Score=60.36  Aligned_cols=34  Identities=38%  Similarity=0.356  Sum_probs=29.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV  114 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~  114 (530)
                      ++|.|+||+|++|++|++.|..++ ++|..+.++.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            479999999999999999998876 6888885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.35  E-value=0.019  Score=62.96  Aligned_cols=42  Identities=21%  Similarity=0.096  Sum_probs=36.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~  122 (530)
                      +|+|.|.| .|++|..++-.|++.|  ++|+++++++++.+.+.+
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~   44 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNS   44 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHc
Confidence            36799997 9999999999999885  889999999998877653

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.34  E-value=0.033  Score=56.96  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=38.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV  124 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~  124 (530)
                      +.++|.|.| .|.+|..++..|+++|++|++.+|+++..+...+++
T Consensus         3 ~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (292)
T PRK07530          3 AIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATI   47 (292)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence            346899999 699999999999999999999999998776654433

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.32  E-value=0.012  Score=64.60  Aligned_cols=44  Identities=20%  Similarity=0.238  Sum_probs=38.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ..+++++|+|+ |.+|+.++..|.+.|++|+++.|+.++.+.+.+
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            45689999995 899999999999999999999999877766543

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.31  E-value=0.015  Score=67.87  Aligned_cols=162  Identities=14%  Similarity=0.136  Sum_probs=105.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...+..+|+||=|+.|..|++.|+.+|.+ +++..|+.-+  .+.+.-+.++.        .|    -+|.+-.-|++..
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~--------~G----VqV~vsT~nitt~ 1833 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR--------RG----VQVQVSTSNITTA 1833 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh--------cC----eEEEEecccchhh
Confidence            34578999999999999999999999975 4555565533  22222122221        12    2344445677666


Q ss_pred             hhHHHHhC------CCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          155 VQIEPALG------NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       155 ~sl~~a~~------~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      +....+++      -+-.|+|+|....      .+..+++..-+-.+.||.||=+..++.  -.+.||.+||...++...
T Consensus      1834 ~ga~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~ 1913 (2376)
T KOG1202|consen 1834 EGARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNA 1913 (2376)
T ss_pred             hhHHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCC
Confidence            66666653      4688999987432      222233333344567788887777765  457899999987655432


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcc
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGM  257 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V  257 (530)
                            ..+.||-....+|+++.+   .|++-+.|.=|.|
T Consensus      1914 ------GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 ------GQTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ------cccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence                  234599999999999864   7888887777665

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.31  E-value=0.049  Score=55.80  Aligned_cols=43  Identities=28%  Similarity=0.276  Sum_probs=36.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|+|.|++|.+|..+++.+...|.+|++++++.++...+
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL  180 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH
Confidence            3467899999999999999998889999999999988765544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=96.29  E-value=0.018  Score=57.96  Aligned_cols=43  Identities=33%  Similarity=0.350  Sum_probs=37.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+++|+|+|++|.+|..+++.+...|.+|++++++.++.+.+
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  185 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV  185 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            3468999999999999999999999999999999988765554

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.28  E-value=0.1  Score=53.66  Aligned_cols=40  Identities=28%  Similarity=0.329  Sum_probs=35.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus         1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~   40 (301)
T PRK09599          1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALA   40 (301)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence            3799998 999999999999999999999999988776653

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.26  E-value=0.028  Score=54.61  Aligned_cols=71  Identities=21%  Similarity=0.287  Sum_probs=50.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|||.|| |-+|...++.|++.|++|+++.+.... +..+.+                  ...+.+...++..   
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~------------------~~~i~~~~~~~~~---   65 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVE------------------EGKIRWKQKEFEP---   65 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh------------------CCCEEEEecCCCh---
Confidence            56789999995 999999999999999999999875422 222211                  1346665544432   


Q ss_pred             HHHHhCCCcEEEEccc
Q 009648          157 IEPALGNASVVICCIG  172 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag  172 (530)
                        ..+.++|+||-+.+
T Consensus        66 --~~l~~adlViaaT~   79 (202)
T PRK06718         66 --SDIVDAFLVIAATN   79 (202)
T ss_pred             --hhcCCceEEEEcCC
Confidence              34678999998864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.24  E-value=0.085  Score=57.13  Aligned_cols=117  Identities=10%  Similarity=0.016  Sum_probs=68.4

Q ss_pred             EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHhCCC
Q 009648           85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNA  164 (530)
Q Consensus        85 VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~~~v  164 (530)
                      |+||+|.+|.++++.|...|++|++..+...+...                   ....++.-+.+|.+..+...++.   
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-------------------~~~~~~~~~~~d~~~~~~~~~l~---  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-------------------GWGDRFGALVFDATGITDPADLK---  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc-------------------CcCCcccEEEEECCCCCCHHHHH---
Confidence            77888999999999999999999987665431110                   00123333334444322222110   


Q ss_pred             cEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH
Q 009648          165 SVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA  244 (530)
Q Consensus       165 D~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~  244 (530)
                                            --......+++.+.  ..+|||++++......         ...|..+|+..+.+++.
T Consensus       101 ----------------------~~~~~~~~~l~~l~--~~griv~i~s~~~~~~---------~~~~~~akaal~gl~rs  147 (450)
T PRK08261        101 ----------------------ALYEFFHPVLRSLA--PCGRVVVLGRPPEAAA---------DPAAAAAQRALEGFTRS  147 (450)
T ss_pred             ----------------------HHHHHHHHHHHhcc--CCCEEEEEccccccCC---------chHHHHHHHHHHHHHHH
Confidence                                  00112222333332  2359999998755211         12488889988877662


Q ss_pred             ------CCCCEEEEEcCc
Q 009648          245 ------SGLPYTIVRPGG  256 (530)
Q Consensus       245 ------~gl~~tIvRPg~  256 (530)
                            .++++..|.++.
T Consensus       148 la~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        148 LGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHhhcCCEEEEEecCC
Confidence                  578888887764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.23  E-value=0.031  Score=52.28  Aligned_cols=69  Identities=29%  Similarity=0.374  Sum_probs=46.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|+++|+| =|.+|+.+++.|...|.+|++..+++-++-+..       +            .++++.        .
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-------~------------dGf~v~--------~   71 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-------M------------DGFEVM--------T   71 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-------H------------TT-EEE---------
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-------h------------cCcEec--------C
Confidence            56789999999 899999999999999999999999885433221       1            233332        2


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +.+++...|+||.+.|.
T Consensus        72 ~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   72 LEEALRDADIFVTATGN   88 (162)
T ss_dssp             HHHHTTT-SEEEE-SSS
T ss_pred             HHHHHhhCCEEEECCCC
Confidence            67788999999999885

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.22  E-value=0.062  Score=58.81  Aligned_cols=75  Identities=20%  Similarity=0.120  Sum_probs=52.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |++|..+++.|.++|++|++++++.. ....+.+.+++               .++++..++-..   
T Consensus        14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~---------------~gv~~~~~~~~~---   74 (480)
T PRK01438         14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA---------------LGATVRLGPGPT---   74 (480)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH---------------cCCEEEECCCcc---
Confidence            45678999995 88999999999999999999986653 22223333332               246666554322   


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                         ...++|.||...|..
T Consensus        75 ---~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 ---LPEDTDLVVTSPGWR   89 (480)
T ss_pred             ---ccCCCCEEEECCCcC
Confidence               345689999998864

>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2

Probab=96.20  E-value=0.062  Score=58.08  Aligned_cols=106  Identities=14%  Similarity=0.224  Sum_probs=67.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC------eEEEEECCc-------------------hhHHHHHHHHHHhhhhcccccc
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF------RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANK  136 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~------~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~  136 (530)
                      +|||.| +|+||..+++.|+..|.      ++++++.+.                   .|...+.+.++++         
T Consensus         1 kVlvVG-aGGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~l---------   70 (435)
T cd01490           1 KVFLVG-AGAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAM---------   70 (435)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHH---------
Confidence            489999 77899999999999997      888887642                   1222233333333         


Q ss_pred             CCCCCCCeEEEEecCCCH-h-hH-HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          137 GIQPVEMLELVECDLEKR-V-QI-EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       137 g~~~~~~v~~v~~Dl~d~-~-sl-~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                        ...-+++.+...+... + .+ ...++++|+||++.-               |+.+-..+-+.|...++ .+|...+.
T Consensus        71 --Np~v~I~a~~~~v~~~~~~~~~~~f~~~~DvVi~alD---------------n~~aR~~vn~~C~~~~i-Pli~~gt~  132 (435)
T cd01490          71 --NPDLKITALQNRVGPETEHIFNDEFWEKLDGVANALD---------------NVDARMYVDRRCVYYRK-PLLESGTL  132 (435)
T ss_pred             --CCCCEEEEEecccChhhhhhhhHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHhCC-CEEEEecc
Confidence              1123455555555321 1 12 356789999999842               34555667788888875 67777765


Q ss_pred             Cc
Q 009648          214 GT  215 (530)
Q Consensus       214 ~v  215 (530)
                      |.
T Consensus       133 G~  134 (435)
T cd01490         133 GT  134 (435)
T ss_pred             cc
Confidence            44

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.18  E-value=0.03  Score=58.05  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=55.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +.+|.|.||||++|..|++.|.++. .++..+..+..+                                 |+.   ...
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------------------------~~~---~~~   45 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------------------------DAA---ARR   45 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------------------------ccc---Cch
Confidence            4689999999999999999999886 466665544310                                 111   123


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      ..+.++|+||.+...                .....++..+.+.|+ ++|=.|+.
T Consensus        46 ~~~~~~DvvFlalp~----------------~~s~~~~~~~~~~g~-~VIDlSad   83 (313)
T PRK11863         46 ELLNAADVAILCLPD----------------DAAREAVALIDNPAT-RVIDASTA   83 (313)
T ss_pred             hhhcCCCEEEECCCH----------------HHHHHHHHHHHhCCC-EEEECChh
Confidence            456789999998753                134556666666666 67777775

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=96.18  E-value=0.3  Score=50.08  Aligned_cols=90  Identities=19%  Similarity=0.245  Sum_probs=61.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +.+|+|-|-||.+|+.+.+.|+.-|++++..+ ++.+-.                       ..+    ..+.-..++.+
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~-----------------------~~v----~G~~~y~sv~d   57 (286)
T TIGR01019         6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGG-----------------------TTV----LGLPVFDSVKE   57 (286)
T ss_pred             CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCc-----------------------cee----cCeeccCCHHH
Confidence            45899999999999999999999998855533 332100                       111    11112234555


Q ss_pred             HhCC--CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          160 ALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +-+.  +|.+|.+...                ..+..+++.|.+.|++.+|.+|+.
T Consensus        58 lp~~~~~Dlavi~vpa----------------~~v~~~l~e~~~~Gvk~avIis~G   97 (286)
T TIGR01019        58 AVEETGANASVIFVPA----------------PFAADAIFEAIDAGIELIVCITEG   97 (286)
T ss_pred             HhhccCCCEEEEecCH----------------HHHHHHHHHHHHCCCCEEEEECCC
Confidence            5554  7999988653                246778888888999988888864

ATP citrate lyases appear to form an outgroup.

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.16  E-value=0.057  Score=55.21  Aligned_cols=42  Identities=19%  Similarity=0.246  Sum_probs=36.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS  123 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~  123 (530)
                      ++|.|.| +|.+|..++..|++.|++|++++++++..+...+.
T Consensus         4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~   45 (291)
T PRK06035          4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL   45 (291)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence            5799998 69999999999999999999999999877655443

>PRK07574 formate dehydrogenase; Provisional

Probab=96.15  E-value=0.019  Score=61.20  Aligned_cols=70  Identities=16%  Similarity=0.149  Sum_probs=51.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+|.|.| .|.||+.+++.|...|.+|++.+|..........                   .++.       -..+
T Consensus       189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-------------------~g~~-------~~~~  241 (385)
T PRK07574        189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-------------------LGLT-------YHVS  241 (385)
T ss_pred             ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-------------------cCce-------ecCC
Confidence            36788999999 7999999999999999999999987632211100                   1111       1235


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      ++++++.+|+|+.+...
T Consensus       242 l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        242 FDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             HHHHhhcCCEEEEcCCC
Confidence            78889999999998764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.12  E-value=0.075  Score=54.90  Aligned_cols=98  Identities=23%  Similarity=0.272  Sum_probs=62.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--H
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--R  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~  154 (530)
                      ..+.+|||+|+ |.||..+++.+...|.+ |+++++++++.+.+.+    +         |      +..+ .|..+  .
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~----~---------g------a~~~-i~~~~~~~  220 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA----L---------G------ADFV-INSGQDDV  220 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h---------C------CCEE-EcCCcchH
Confidence            34789999985 99999999999899988 9999888876554321    1         1      1111 23333  3


Q ss_pred             hhHHHHhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          155 VQIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       155 ~sl~~a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.+.+...  ++|+||.+.|..               ......++.++..  ++||.++..
T Consensus       221 ~~~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~--G~~v~~g~~  264 (339)
T cd08239         221 QEIRELTSGAGADVAIECSGNT---------------AARRLALEAVRPW--GRLVLVGEG  264 (339)
T ss_pred             HHHHHHhCCCCCCEEEECCCCH---------------HHHHHHHHHhhcC--CEEEEEcCC
Confidence            33444443  699999998741               1122334444443  478887753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=96.12  E-value=0.077  Score=57.33  Aligned_cols=110  Identities=20%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|||.|++ .+|..+++.|+..|. ++++++.+.                   .+++.+.+.+.++          
T Consensus        18 L~~s~VlliG~g-glGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eL----------   86 (425)
T cd01493          18 LESAHVCLLNAT-ATGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQEL----------   86 (425)
T ss_pred             HhhCeEEEEcCc-HHHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHH----------
Confidence            345689999855 599999999999995 777776431                   2333444444443          


Q ss_pred             CCCCCCeEEEEecCCCH-hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~-~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                       .+.-.++++..++.+. +.....+.++|+||.+-..               ......|.+.|.++++ .||++++.|.
T Consensus        87 -Np~V~i~~~~e~~~~ll~~~~~f~~~fdiVI~t~~~---------------~~~~~~L~~~c~~~~i-PlI~~~s~G~  148 (425)
T cd01493          87 -NPDVNGSAVEESPEALLDNDPSFFSQFTVVIATNLP---------------ESTLLRLADVLWSANI-PLLYVRSYGL  148 (425)
T ss_pred             -CCCCEEEEEecccchhhhhHHHHhcCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEecccC
Confidence             1123445565555432 2235678899999976321               2233457788888887 7888888765

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.11  E-value=0.052  Score=57.15  Aligned_cols=97  Identities=18%  Similarity=0.253  Sum_probs=61.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+.+|||.|+ |.||..+++.+...|.+|++++++.++...+.+   ++         |      +..+ .|..+.+.+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~---~~---------G------a~~v-i~~~~~~~~~  242 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN---RL---------G------ADSF-LVSTDPEKMK  242 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH---hC---------C------CcEE-EcCCCHHHHH
Confidence            4678999775 999999999988899999988887665443322   11         1      1211 2333334555


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +...++|+||.+.|..               ......++.++..  ++||.++.
T Consensus       243 ~~~~~~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~vG~  279 (360)
T PLN02586        243 AAIGTMDYIIDTVSAV---------------HALGPLLGLLKVN--GKLITLGL  279 (360)
T ss_pred             hhcCCCCEEEECCCCH---------------HHHHHHHHHhcCC--cEEEEeCC
Confidence            5556799999998731               1123344544443  47888764

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.10  E-value=0.022  Score=61.35  Aligned_cols=67  Identities=22%  Similarity=0.246  Sum_probs=50.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+| .|.||+.+++.|...|.+|+++++++.+......                   .++++     .+   +
T Consensus       210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-------------------~G~~v-----~~---l  261 (425)
T PRK05476        210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-------------------DGFRV-----MT---M  261 (425)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-------------------cCCEe-----cC---H
Confidence            5688999999 5899999999999999999999998866433211                   11221     12   4


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      .++++++|+||.+.|
T Consensus       262 ~eal~~aDVVI~aTG  276 (425)
T PRK05476        262 EEAAELGDIFVTATG  276 (425)
T ss_pred             HHHHhCCCEEEECCC
Confidence            566789999999875

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.09  E-value=0.097  Score=53.82  Aligned_cols=39  Identities=18%  Similarity=0.117  Sum_probs=34.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      |+|.|.| .|.+|..+++.|++.|++|++.+|+.++.+.+
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~   39 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVA   39 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            3688998 99999999999999999999999998776654

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.08  E-value=0.048  Score=55.74  Aligned_cols=42  Identities=29%  Similarity=0.226  Sum_probs=36.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      .+.+|||.|++|.+|..+++.+.+.|.+|++++++.++...+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            457999999999999999999999999999999988765554

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=96.07  E-value=0.41  Score=50.80  Aligned_cols=143  Identities=15%  Similarity=0.122  Sum_probs=83.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHh-h-hhccccccCCCCCCCeEEEEecCC--C-H
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQM-K-LDGELANKGIQPVEMLELVECDLE--K-R  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~-~-l~~~~~~~g~~~~~~v~~v~~Dl~--d-~  154 (530)
                      .+|||.| +|-++-+|+..|-+.+ ++|=++.|...+.+.+.+.+.+- . +...      -+++..+.+.|...  . .
T Consensus         2 ~~VLI~G-tGPvAiQLAv~lk~~~~~~vGi~~R~S~rSq~f~~aL~~~~~~~~v~------vqn~~h~~l~G~~~id~~~   74 (429)
T PF10100_consen    2 GNVLIVG-TGPVAIQLAVILKKHGNCRVGIVGRESVRSQRFFEALARSDGLFEVS------VQNEQHQALSGECTIDHVF   74 (429)
T ss_pred             CceEEEc-CCHHHHHHHHHHHhccCceeeeecCcchhHHHHHHHHHhCCCEEEEe------ecchhhhhhcCeEEhhHhh
Confidence            5799999 9999999999998887 57888999888888887766542 0 0000      00011111111110  0 1


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHH
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~s  234 (530)
                      ..++++.+.+|.+|-|.-.-            . +..+..=+....-.+++++|++|...+                  +
T Consensus        75 ~~~~~i~g~WdtlILavtaD------------A-Y~~VL~ql~~~~L~~vk~iVLvSPtfG------------------S  123 (429)
T PF10100_consen   75 QDYEEIEGEWDTLILAVTAD------------A-YLDVLQQLPWEVLKRVKSIVLVSPTFG------------------S  123 (429)
T ss_pred             cCHHHhcccccEEEEEechH------------H-HHHHHHhcCHHHHhhCCEEEEECcccc------------------h
Confidence            23445556788888875320            0 111222222222347899999997532                  2


Q ss_pred             HHHHHHHHHHCCCCEEEEEcCcccCCC
Q 009648          235 KRKAEEALIASGLPYTIVRPGGMERPT  261 (530)
Q Consensus       235 K~~~E~~l~~~gl~~tIvRPg~V~Gp~  261 (530)
                      ...++.++++.|....||-.+.-||..
T Consensus       124 ~~lv~~~l~~~~~~~EVISFStY~gdT  150 (429)
T PF10100_consen  124 HLLVKGFLNDLGPDAEVISFSTYYGDT  150 (429)
T ss_pred             HHHHHHHHHhcCCCceEEEeecccccc
Confidence            334556666666667777777766654

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.07  E-value=0.029  Score=58.88  Aligned_cols=94  Identities=19%  Similarity=0.199  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-CCCe---EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLK-LGFR---VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~---V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++++|.|.||||++|+.|++.|.+ ..+.   ++++....+.-+.+                + +....+.+...   |.
T Consensus         4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~----------------~-~~~~~l~v~~~---~~   63 (347)
T PRK06728          4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV----------------Q-FKGREIIIQEA---KI   63 (347)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe----------------e-eCCcceEEEeC---CH
Confidence            346899999999999999999996 5666   55555433211110                0 00012333322   22


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +    .|.++|+||.+++..                .+..++..+.+.|+ .+|=.|+.
T Consensus        64 ~----~~~~~Divf~a~~~~----------------~s~~~~~~~~~~G~-~VID~Ss~  101 (347)
T PRK06728         64 N----SFEGVDIAFFSAGGE----------------VSRQFVNQAVSSGA-IVIDNTSE  101 (347)
T ss_pred             H----HhcCCCEEEECCChH----------------HHHHHHHHHHHCCC-EEEECchh
Confidence            2    346899999998642                35666777767775 56666664

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.07  E-value=0.14  Score=56.12  Aligned_cols=41  Identities=17%  Similarity=0.297  Sum_probs=37.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      .+|.|.| .|-+|..+++.|+++||+|++.+|+.++.+.+.+
T Consensus         2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~   42 (470)
T PTZ00142          2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFVK   42 (470)
T ss_pred             CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            3699999 8999999999999999999999999998887754

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.07  E-value=0.017  Score=59.50  Aligned_cols=40  Identities=23%  Similarity=0.213  Sum_probs=35.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|.+|..++..|++.|++|++++|+.++.+.+.
T Consensus         2 mkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~   41 (325)
T PRK00094          2 MKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEIN   41 (325)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5799999 699999999999999999999999987766654

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.06  E-value=0.019  Score=58.95  Aligned_cols=40  Identities=28%  Similarity=0.333  Sum_probs=35.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ++|.|.| .|.+|..+++.|+++|++|++.+|+.++.+.+.
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~   41 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALV   41 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence            4799998 999999999999999999999999988776654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.05  E-value=0.022  Score=58.00  Aligned_cols=39  Identities=21%  Similarity=0.212  Sum_probs=34.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      |+|+|.| +|.+|..++..|.+.|++|++++|+.+..+.+
T Consensus         1 m~I~IiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~   39 (304)
T PRK06522          1 MKIAILG-AGAIGGLFGAALAQAGHDVTLVARRGAHLDAL   39 (304)
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence            4799999 59999999999999999999999987665554

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.05  E-value=0.0082  Score=55.78  Aligned_cols=77  Identities=25%  Similarity=0.318  Sum_probs=51.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhh-hhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      +|.|.| +|-.|.+++..|.++|++|++..|+.+..+.+.+...... ++      +..-..++.+       ..+++++
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~------~~~l~~~i~~-------t~dl~~a   66 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLP------GIKLPENIKA-------TTDLEEA   66 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTST------TSBEETTEEE-------ESSHHHH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCC------CcccCccccc-------ccCHHHH
Confidence            589999 7889999999999999999999999977776654322110 00      0001122222       1346788


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.+.-
T Consensus        67 ~~~ad~IiiavP   78 (157)
T PF01210_consen   67 LEDADIIIIAVP   78 (157)
T ss_dssp             HTT-SEEEE-S-
T ss_pred             hCcccEEEeccc
Confidence            999999998853

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	530
1xq6_A	253	X-ray Structure Of Gene Product From Arabidopsis Th		7e-12

>pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 26/259 (10%)
Query: 84  FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
            V GA+G+ G + V + LK G   F  +  VRS Q  E +            D +  N  
Sbjct: 8   LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66
Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
            Q ++ L ++   + K +   +P  G     I   G           P ++D+   KN +
Sbjct: 67  FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117
Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
           DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176
Query: 257 MERPTDAYKE---THNITLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311
           +       +E     +  L Q D  T+    V+ + +  LL   AKN++       E   
Sbjct: 177 LLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE--- 233
Query: 312 ETTAPLTPMEELLAKIPSQ 330
            T+ P    + L +++ S+
Sbjct: 234 GTSTPTKDFKALFSQVTSR 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	530
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-55
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-53
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	3e-48
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	8e-48
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-37
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-29
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-23
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-23
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	7e-22
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	4e-21
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	1e-20
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	1e-20
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	7e-20
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-19
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-19
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	2e-19
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-19
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	1e-17
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	1e-17
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-17
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-17
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	9e-17
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-16
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-08
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	5e-07
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	3e-06
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	8e-06
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	2e-05
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-05
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	6e-05
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	7e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	5e-04

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score =  185 bits (471), Expect = 2e-55
 Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 34/246 (13%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA GKV    + EL   G    A VR+ ++   L                  +    
Sbjct: 25  LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL------------------RERGA 66

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            ++V  +LE+      A  +   V+   G+             ID       +  A    
Sbjct: 67  SDIVVANLEE--DFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG 122

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
           +  FIMVSS+GT     P          L+ KR A++ L  S L YTIVRPG +   ++ 
Sbjct: 123 IKRFIMVSSVGTVD---PDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL---SNE 176

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
            + T  +T+S   +     ++   VA+++A +   +  +  K  EV+       TP+ ++
Sbjct: 177 -ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD----TPIAKV 230

Query: 324 LAKIPS 329
           + ++ S
Sbjct: 231 VEQLGS 236

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score =  180 bits (458), Expect = 2e-53
 Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 48/270 (17%)

Query: 84  FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
            V GA+G+ G    ++L +    F  +  VRS Q  E +                     
Sbjct: 8   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA----------------- 50

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGAS---------------EKEVFDITGPYR 186
              ++   D+     I PA      ++    A                E    D   P +
Sbjct: 51  ---DVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQ 107

Query: 187 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 246
           +D+   KN +DAA +A V H ++V S+G      P   L     +L+WKRKAE+ L  SG
Sbjct: 108 VDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSG 166

Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG---GQVSNLQVAELLACMAKNRSLSY 303
            PYTI+R GG+       +E   + + ++D L       V    VAE+          + 
Sbjct: 167 TPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AK 222

Query: 304 CKVVEVI---AETTAPLTPMEELLAKIPSQ 330
            K  ++      T+ P    + L +++ S+
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score =  165 bits (420), Expect = 3e-48
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 38/245 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           F+ G+TG+VG   ++ L    +++ AG R V++                           
Sbjct: 4   FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------------NN 42

Query: 144 LELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
           ++ V  D++   + +   L     +I   G+  K         ++D      L+ AA  A
Sbjct: 43  VKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK------SLLKVDLYGAVKLMQAAEKA 96

Query: 203 KVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALI-ASGLPYTIVRPGGMERP 260
           +V  FI++S++ +     +  A  +      + K  A+  L   + L YTI++PG +   
Sbjct: 97  EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGAL--- 153

Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM 320
           T+  + T  I ++ E        +   VA+ +  +      S  KV+ +    TA    +
Sbjct: 154 TEE-EATGLIDINDE---VSASNTIGDVADTIKELVMTDH-SIGKVISMHNGKTAIKEAL 208

Query: 321 EELLA 325
           E LL 
Sbjct: 209 ESLLE 213

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score =  164 bits (416), Expect = 8e-48
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 32/211 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ G  T+ + ++ G+ V   VR   R                   +       
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------------SEGPRP------ 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V  D+ +   ++  +     VI  +G           P  +  +  +N+V A     
Sbjct: 48  AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHG 102

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
           V+  +  +S        P  +      V     +  + L  SGL Y  V P    ++P  
Sbjct: 103 VDKVVACTSAFL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP-- 158

Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
               T   T++ +       +S   +   + 
Sbjct: 159 ---LTGAYTVTLDGRGPSRVISKHDLGHFML 186

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score =  136 bits (343), Expect = 4e-37
 Identities = 43/242 (17%), Positives = 78/242 (32%), Gaps = 41/242 (16%)

Query: 84  FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + GA G++    + +L  K   +     R   +               +          
Sbjct: 27  LILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------------KPYPTNS---- 69

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             +++  D+     ++ A+    +V   +               +D QA  +++ A    
Sbjct: 70  --QIIMGDVLNHAALKQAMQGQDIVYANLTGE-----------DLDIQA-NSVIAAMKAC 115

Query: 203 KVNHFIMVSSLGTNK---FGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
            V   I V SLG        F      +    L   R+A +A+ ASGL YTI+RP    +
Sbjct: 116 DVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTD 175

Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
                Y+ T      + +   G  VS   VA L+  +         + + +    T    
Sbjct: 176 EDIIDYELTS-----RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDK 230

Query: 319 PM 320
           P 
Sbjct: 231 PF 232

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score =  114 bits (287), Expect = 2e-29
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 38/220 (17%)

Query: 84  FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + GA G++       LL      +    R ++                      I   E
Sbjct: 9   TILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP----------------EIIDHE 52

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
            + ++E   +    +E A+ NA VV                          ++V A +  
Sbjct: 53  RVTVIEGSFQNPGXLEQAVTNAEVVFVGAME--------------SGSDMASIVKALSRX 98

Query: 203 KVNHFIMVSSLGTN----KFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME 258
            +   I VS  G +             NL    +  +R+A   L  S L YTI+R   + 
Sbjct: 99  NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL- 157

Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298
              +  + T    + +       QVS   V + +  +   
Sbjct: 158 --YNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHA 195

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 99.0 bits (247), Expect = 3e-23
 Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 84  FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            V G TG  G    R LL+ G F+VR   R+ ++               EL  +G     
Sbjct: 9   VVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK-----------ELRLQGA---- 53

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E+V+ D + +V +E AL  A              +  +     + +  K L D A   
Sbjct: 54  --EVVQGDQDDQVIMELALNGAYATFIVT------NYWESCSQEQEVKQGKLLADLARRL 105

Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
            +++ +        K          F G    K + EE     G+P T VR     E
Sbjct: 106 GLHYVVYSGLENIKKLTAGRLAAAHFDG----KGEVEEYFRDIGVPMTSVRLPCYFE 158

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 96.7 bits (241), Expect = 5e-23
 Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 32/185 (17%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GA+G VGS  + E L  GF V A VR  ++ +                       E 
Sbjct: 8   VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------------ENEH 47

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           L++ + D+    ++      A  VI                Y    +    ++D    A 
Sbjct: 48  LKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN----PDIYDETIKVYLTIIDGVKKAG 103

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK--------AEEALIASGLPYTIVRPG 255
           VN F+MV   G+        +++                       +    + +    P 
Sbjct: 104 VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPA 163

Query: 256 GMERP 260
              RP
Sbjct: 164 ADMRP 168

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 95.3 bits (237), Expect = 7e-22
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 25/173 (14%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG +G    +  L LG         + R      + ++ +L       G      
Sbjct: 8   LLIGATGYIGRHVAKASLDLGHPTFL----LVRESTASSNSEKAQLLESFKASGA----- 58

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V   ++    +  A+ N  VVI  +G+             +  ++  N++ A     
Sbjct: 59  -NIVHGSIDDHASLVEAVKNVDVVISTVGS-------------LQIESQVNIIKAIKEVG 104

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                  S  G +     A        V   K K   A+ A G+PYT V    
Sbjct: 105 TVKRFFPSEFGNDVDNVHAVEPAK--SVFEVKAKVRRAIEAEGIPYTYVSSNC 155

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 93.1 bits (231), Expect = 4e-21
 Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G R V   + LG       R       +V ++ ++++       G       
Sbjct: 9   IVGGTGYIGKRIVNASISLGHPTYVLFR-----PEVVSNIDKVQMLLYFKQLGA------ 57

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           +L+E  L+   ++  AL    VVI  +           G           LV+A   A  
Sbjct: 58  KLIEASLDDHQRLVDALKQVDVVISALAG---------GVLSHHILEQLKLVEAIKEAGN 108

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
               + S  G +      A+        + KRK   A+ A+ +PYT V   
Sbjct: 109 IKRFLPSEFGMDPDIMEHALQP-GSITFIDKRKVRRAIEAASIPYTYVSSN 158

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 92.6 bits (230), Expect = 1e-20
 Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 43/186 (23%)

Query: 77  SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELA 134
           ++      V GATG+ G+  +R    +G  VRA V S++   AE L             A
Sbjct: 2   AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL------------QA 49

Query: 135 NKGIQPVEMLELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRID-FQAT 192
              +       L +  L   V  ++     A +            F  T     D     
Sbjct: 50  IPNV------TLFQGPLLNNVPLMDTLFEGAHL-----------AFINTTSQAGDEIAIG 92

Query: 193 KNLVDAA-TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPY 249
           K+L DAA     + H+I  SS+         ++   +  V +W  K   E  +   GLP 
Sbjct: 93  KDLADAAKRAGTIQHYI-YSSMP------DHSLYGPWPAVPMWAPKFTVENYVRQLGLPS 145

Query: 250 TIVRPG 255
           T V  G
Sbjct: 146 TFVYAG 151

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 91.2 bits (227), Expect = 1e-20
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 44/176 (25%)

Query: 85  VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           V GATG++G   ++ LLK     ++ A VR+V++A               LA++G+    
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-------------TLADQGV---- 47

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAA 199
             E+   D  +   ++ A    S +             I+GP+  +        N+V AA
Sbjct: 48  --EVRHGDYNQPESLQKAFAGVSKL-----------LFISGPHYDNTLLIVQHANVVKAA 94

Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
             A V H          +   P A               E A+  + +PYT +R  
Sbjct: 95  RDAGVKHIAYTGYAFAEESIIPLA---------HVHLATEYAIRTTNIPYTFLRNA 141

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 88.9 bits (221), Expect = 7e-20
 Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 42/174 (24%)

Query: 85  VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           + GATG++G   +  L+K     ++ A VR+  +A+              LA +GI    
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-------------ALAAQGI---- 46

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATI 201
              + + D      +  AL     +             I+           +N+++AA  
Sbjct: 47  --TVRQADYGDEAALTSALQGVEKL-----------LLISSSEVGQRAPQHRNVINAAKA 93

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           A V      S L  +      A             + E+ L  SG+ YT++R G
Sbjct: 94  AGVKFIAYTSLLHADTSPLGLAD---------EHIETEKMLADSGIVYTLLRNG 138

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 86.6 bits (214), Expect = 1e-19
 Identities = 34/223 (15%), Positives = 66/223 (29%), Gaps = 44/223 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ GSR + E    G  V A VR+  +     + +                   
Sbjct: 4   GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI------------------- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +++ D+         L + +VV+   G S                +  +L+       
Sbjct: 45  -NILQKDIFDLT--LSDLSDQNVVVDAYGIS-------PDEAEKHVTSLDHLISVLNGTV 94

Query: 204 VNHFIMVSSLGTNKFGFPAAIL--------NLFWGVLLWKRKAEEALIA--SGLPYTIVR 253
               ++V    + +       L          ++     + K  E L +  +   +T + 
Sbjct: 95  SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS 154

Query: 254 PGGM---ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
           P  M      T  Y+   +  L   D      +S    A  + 
Sbjct: 155 PSAMFEPGERTGDYQIGKDHLLFGSDG--NSFISMEDYAIAVL 195

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 86.8 bits (215), Expect = 2e-19
 Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 31/176 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
            F+ GA+G+ G   ++E+L+ G   +V    R     +                    + 
Sbjct: 21  VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EA 61

Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
            + +     D EK      A     V  CC+G +  +        R+D        + A 
Sbjct: 62  YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAK 120

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPG 255
                HF ++SS G +K        N  +  +  K + E  +       Y++ RPG
Sbjct: 121 AGGCKHFNLLSSKGADKSS------NFLYLQV--KGEVEAKVEELKFDRYSVFRPG 168

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 42/175 (24%)

Query: 85  VAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           + GATG +G+    + +         GVR+V++               +     +     
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-------------DDWRGKV----- 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             + + D   +  +  A      V+  I +     F      RI     +NLV AA  + 
Sbjct: 47  -SVRQLDYFNQESMVEAFKGMDTVVF-IPSIIHPSFK-----RI--PEVENLVYAAKQSG 97

Query: 204 VNHFIMVSSLG---TNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
           V H I +        N F               +   A   L  SG+ YT VR  
Sbjct: 98  VAHIIFIGYYADQHNNPFHMSP-----------YFGYASRLLSTSGIDYTYVRMA 141

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 87.3 bits (216), Expect = 4e-19
 Identities = 34/172 (19%), Positives = 53/172 (30%), Gaps = 24/172 (13%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G   V   +K G    A VR    A N      + +L     + G+      
Sbjct: 7   ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN---PETKEELIDNYQSLGV------ 57

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            L+E D+     +  A+    +VIC  G                 +    ++ A   A  
Sbjct: 58  ILLEGDINDHETLVKAIKQVDIVICAAGRL-------------LIEDQVKIIKAIKEAGN 104

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
                 S  G +     A        V   K      + A G+PYT +    
Sbjct: 105 VKKFFPSEFGLDVDRHDAVEPVRQ--VFEEKASIRRVIEAEGVPYTYLCCHA 154

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 83.5 bits (207), Expect = 1e-17
 Identities = 33/188 (17%), Positives = 51/188 (27%), Gaps = 32/188 (17%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GATG +G    R +   G  +    R   + + L                 ++   
Sbjct: 16  YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL---------------AYLE--- 57

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
             E    ++     +E AL     VI   G                   T     A   A
Sbjct: 58  -PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA 116

Query: 203 KVNHFIMVSS---LGTNKFGFPA---AILNLFWGVLLW----KRKAEEA---LIASGLPY 249
           +V   + V S   +  +  G P       +            K   +E       +GLP 
Sbjct: 117 RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPV 176

Query: 250 TIVRPGGM 257
            I  PG +
Sbjct: 177 VIGIPGMV 184

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 34/186 (18%)

Query: 82  LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
              +AGATG  G   +  +L      +  V +  R                      + +
Sbjct: 7   RVLLAGATGLTGEHLLDRILSEPTLAK--VIAPAR----------------------KAL 42

Query: 142 EMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
                ++  +    ++ P L G+     CC+G + KE         +DF     +   A 
Sbjct: 43  AEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRAL 102

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMER 259
                H+++VS+LG +           +  V   K + E+AL   G P  TI RP  +  
Sbjct: 103 EMGARHYLVVSALGADAKSS-----IFYNRV---KGELEQALQEQGWPQLTIARPSLLFG 154

Query: 260 PTDAYK 265
           P + ++
Sbjct: 155 PREEFR 160

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 25/171 (14%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G   VR  L              R      +   ++L  E  + G+      
Sbjct: 9   IYGGTGYIGKFMVRASLSFSHPTFI----YARPLTPDSTPSSVQLREEFRSMGV------ 58

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            ++E ++E+  ++   L    +VI  +                   +  ++++A   A  
Sbjct: 59  TIIEGEMEEHEKMVSVLKQVDIVISALPFP-------------MISSQIHIINAIKAAGN 105

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
               + S  G  +       L  F  VL  KR    A+ A+ LPYT V   
Sbjct: 106 IKRFLPSDFGCEEDRIKP--LPPFESVLEKKRIIRRAIEAAALPYTYVSAN 154

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 81.5 bits (201), Expect = 4e-17
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 30/172 (17%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G TG +G+  V+  LKLG       R          S K   LD E  + G       
Sbjct: 16  IFGGTGYIGNHMVKGSLKLGHPTYVFTRP--------NSSKTTLLD-EFQSLGA------ 60

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
            +V+ +L++  ++   +    VVI  +                       +++A  +A  
Sbjct: 61  IIVKGELDEHEKLVELMKKVDVVISALAFP-------------QILDQFKILEAIKVAGN 107

Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
               + S  G          L  F  ++  KR    A+  + +PYT V    
Sbjct: 108 IKRFLPSDFGVE--EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANC 157

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 78.5 bits (193), Expect = 9e-17
 Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 36/184 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATG+ GS  V E  + G  V A VR  Q+A              +     +  +  
Sbjct: 4   AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-------------DRLGATVATL-- 48

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                   E  V  E  L +   V+  +          +G   +      +LV     + 
Sbjct: 49  ------VKEPLVLTEADLDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD 97

Query: 204 VNHFIMVSSL--------GTNKFGFPAAILNLFW--GVLLWKRKAEEALIASGLPYTIVR 253
                ++ S               FP +  +  W  G L    + +   + + + +  + 
Sbjct: 98  TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157

Query: 254 PGGM 257
           P   
Sbjct: 158 PSEA 161

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 30/188 (15%)

Query: 71  TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLD 130
           T +   S    +  +AGATG +G       L          R   R      S  + K+ 
Sbjct: 2   TVSPVPSPKGRVL-IAGATGFIGQFVATASLDAHRPTYILARPGPR------SPSKAKIF 54

Query: 131 GELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRID 188
             L +KG        +V   + ++  +E  L      +V+  +G              I 
Sbjct: 55  KALEDKGA------IIVYGLINEQEAMEKILKEHEIDIVVSTVGGES-----------IL 97

Query: 189 FQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP 248
            Q    LV A          + S  G +        +     +   KR+  + +  SG+P
Sbjct: 98  DQ--IALVKAMKAVGTIKRFLPSEFGHDVNRADP--VEPGLNMYREKRRVRQLVEESGIP 153

Query: 249 YTIVRPGG 256
           +T +    
Sbjct: 154 FTYICCNS 161

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 34/189 (17%), Positives = 55/189 (29%), Gaps = 55/189 (29%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            +AG  G +G    R L   G  V    RS Q                     G+Q    
Sbjct: 7   LIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA-----------------GVQT--- 45

Query: 144 LELVECDLEKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
              +  D+ +   +   +     +++ C+ ASE   +          +  +N + A   A
Sbjct: 46  ---LIADVTRPDTLASIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGA 99

Query: 203 KVNHFIMVSSLG---------------TNKFGFPAAILNLFWGVLLWKRKAEEALIASGL 247
            + H   VSS G                    F    +           +AE  L  +  
Sbjct: 100 PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM----------LEAEALL--AAY 147

Query: 248 PYTIVRPGG 256
             TI+R  G
Sbjct: 148 SSTILRFSG 156

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 8e-11
 Identities = 88/554 (15%), Positives = 149/554 (26%), Gaps = 201/554 (36%)

Query: 24  IVKSFGSCQ-ILKFP----SSKKFSHPRKLKLPDFKAQA---------SGTINICSEAVG 69
            V +F  C+ +   P    S ++  H   +   D  +                +  + V 
Sbjct: 29  FVDNF-DCKDVQDMPKSILSKEEIDH--IIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVE 84

Query: 70  ATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKL 129
                 +    N  F+        S    E  +     R  +    R  N  Q   +   
Sbjct: 85  ------EVLRINYKFLM-------SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY-- 129

Query: 130 DGELANKGIQPVEMLELVECDLEKRV-QIEPALGNASVVICCIGASEKEVFDITGPYRID 188
                      V  L+     L + + ++ PA     V+I  +  S K            
Sbjct: 130 ----------NVSRLQPYL-KLRQALLELRPAKN---VLIDGVLGSGKTW---------- 165

Query: 189 FQATKNLV-DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA--S 245
                 +  D     KV            K  F      +FW + L    + E ++    
Sbjct: 166 ------VALDVCLSYKV----------QCKMDF-----KIFW-LNLKNCNSPETVLEMLQ 203

Query: 246 GLPYTIVRPGGMERPTDAYKETHNITLSQE--DTLFGGQ-----------VSNLQVAEL- 291
            L    + P    R   +      I   Q     L   +           V N +     
Sbjct: 204 KL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF 262

Query: 292 -LAC----MAKNRS----LSYCKVVEV-IAETTAPLTPME--ELLAKIPSQRAE--PKES 337
            L+C      + +     LS      + +   +  LTP E   LL K    R +  P+E 
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322

Query: 338 IAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSG 397
           +    ++P    S+I+E     I +                  + +              
Sbjct: 323 L---TTNPRRL-SIIAES----IRDGLATWD---------NWKHVNCD------------ 353

Query: 398 KKDSTI---VDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKARPLSPYFAYEDLK-- 452
           K  + I   ++ L                         P E    R +     ++ L   
Sbjct: 354 KLTTIIESSLNVLE------------------------PAEY---RKM-----FDRLSVF 381

Query: 453 PPSSPSPTPSGPKEVLS------SSSTTGEVASQLTGGNDVAKTPDTSLVEKNPIVNSIH 506
           PPS+  PT      +LS        S    V ++L            SLVEK P  ++I 
Sbjct: 382 PPSAHIPT-----ILLSLIWFDVIKSDVMVVVNKLH---------KYSLVEKQPKESTIS 427

Query: 507 HHSPYHMYEDLKPP 520
                 +Y +LK  
Sbjct: 428 IP---SIYLELKVK 438

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 47/203 (23%)

Query: 83  AFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG 137
           A + G TG +G+     L         ++V    R  + A +    +             
Sbjct: 4   ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI------------- 50

Query: 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 197
                    V+CD+      +  L   + V      +             + +  +N++D
Sbjct: 51  -------NYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLD 103

Query: 198 A--ATIAKVNHFIMVSSLGTNKFGFPA------------------AILNLFWGVLLWKRK 237
           A       + H  + +        F +                    +N ++ +      
Sbjct: 104 AVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDL--EDIM 161

Query: 238 AEEALIASGLPYTIVRPGGMERP 260
            EE     GL +++ RPG +   
Sbjct: 162 LEEVEKKEGLTWSVHRPGNIFGF 184

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 50.7 bits (122), Expect = 5e-07
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 32/144 (22%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G TG +GS  ++ LL+ G+ V   +R+    +  V  +    L G          E 
Sbjct: 5   CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT--NLPG--------ASEK 54

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L     DL        A+     +     AS         E+ V    + G         
Sbjct: 55  LHFFNADLSNPDSFAAAIEGCVGIFHT--ASPIDFAVSEPEEIVTKRTVDG--------A 104

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
             ++ A   +K V  FI  SS   
Sbjct: 105 LGILKACVNSKTVKRFIYTSSGSA 128

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 48.4 bits (116), Expect = 3e-06
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 34/144 (23%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G TG V S  V+ LL+ G+ V   VR     +  V  + +++  G+           
Sbjct: 13  CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSHLLELQELGD----------- 60

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L++   DL   +  E  +     V     A+         E ++    I G         
Sbjct: 61  LKIFRADLTDELSFEAPIAGCDFVFHV--ATPVHFASEDPENDMIKPAIQG--------V 110

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
            N++ A T AK V   I+ SS   
Sbjct: 111 VNVMKACTRAKSVKRVILTSSAAA 134

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 27/140 (19%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA G V S  V +LL+ G++VR   RS  +  NL    K+             P   
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL---QKRWDAKY--------PGRF 63

Query: 144 LELVECDLEKRVQIEPALGNASVVI-----CCIGASEKEVFD--ITGPYRIDFQATKNLV 196
              V  D+ K+   +  +  A+ V              EV    I G        T N +
Sbjct: 64  ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGG--------TLNAL 115

Query: 197 DAATIAK-VNHFIMVSSLGT 215
            AA     V  F++ SS  +
Sbjct: 116 RAAAATPSVKRFVLTSSTVS 135

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 33/144 (22%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA+G +GS  V  LL+ G+ VRA VR     + +      + L     +        
Sbjct: 9   CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL---LDLPKAETH-------- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
           L L + DL      + A+   + V     A+         E EV    I G         
Sbjct: 58  LTLWKADLADEGSFDEAIKGCTGVFHV--ATPMDFESKDPENEVIKPTIEG--------M 107

Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
             ++ +   AK V   +  SS GT
Sbjct: 108 LGIMKSCAAAKTVRRLVFTSSAGT 131

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 24/128 (18%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           V GA G++G      L  +   +R    S                  + A          
Sbjct: 8   VTGAAGQLGRVMRERLAPMAEILRLADLS----------------PLDPAGPNE------ 45

Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
           E V+CDL     +   +     ++                 + +     NL +AA     
Sbjct: 46  ECVQCDLADANAVNAMVAGCDGIVHL--GGISVEKPFEQILQGNIIGLYNLYEAARAHGQ 103

Query: 205 NHFIMVSS 212
              +  SS
Sbjct: 104 PRIVFASS 111

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 28/130 (21%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           V GA G VGS     L  L   VR      +  AE                         
Sbjct: 7   VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE---------------------- 44

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIA 202
            E+V CDL     +   + +   +I   G S E+   D     + +     NL +AA   
Sbjct: 45  -EIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWND---ILQANIIGAYNLYEAARNL 100

Query: 203 KVNHFIMVSS 212
                +  SS
Sbjct: 101 GKPRIVFASS 110

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 44.2 bits (105), Expect = 7e-05
 Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 29/179 (16%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G  G++GS     LL+ G +V  G+      +N           G   +  ++    L
Sbjct: 26  ITGICGQIGSHIAELLLERGDKVV-GI------DNFA--------TGRREH--LKDHPNL 68

Query: 145 ELVECDLEKRVQIEPALGNASV-VICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             VE  +     +   +G+     +    AS K+  D       +     N+V AA    
Sbjct: 69  TFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN 128

Query: 204 VNHFIMVSS---LGTNKFGFP------AAILNLFWGVLLWKRKAEEALIASGLPYTIVR 253
           V  F+   +    G      P          N  + +   K   E+ L  SGL +   R
Sbjct: 129 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAIS--KSANEDYLEYSGLDFVTFR 185

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 41.0 bits (96), Expect = 5e-04
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 34/131 (25%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
              G  G       R L   G+R+    R+  + E              +   G +P+  
Sbjct: 9   LSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-------------AIRASGAEPLLW 54

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                   E     EP+L   + ++           D   P      A      AA  A+
Sbjct: 55  ------PGE-----EPSLDGVTHLLISTAPDSGG--D---PVL----AALGDQIAARAAQ 94

Query: 204 VNHFIMVSSLG 214
                 +S+  
Sbjct: 95  FRWVGYLSTTA 105

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	530
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.98
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.98
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.98
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.98
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.98
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.97
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.97
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.97
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.97
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.97
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.97
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.97
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.97
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.97
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.97
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.97
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.97
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.97
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.97
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.97
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.97
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.97
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.97
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.97
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.97
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.97
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.97
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.97
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.96
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.96
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.96
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.96
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.96
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.96
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.96
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.96
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.96
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.96
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.96
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.96
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.96
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.96
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.96
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.96
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.96
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.96
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.96
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.96
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.96
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.95
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.95
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.95
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.95
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.95
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.95
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.94
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.94
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.94
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.93
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.93
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.93
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.93
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.93
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.93
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.93
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.93
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.93
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.92
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.92
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.92
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.92
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.92
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.92
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.92
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.92
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.92
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.92
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.92
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.92
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.92
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.92
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.92
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.92
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.92
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.92
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.92
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.92
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.92
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.92
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.92
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.91
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.91
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.91
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.91
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.91
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.91
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.91
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.91
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.91
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.91
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.91
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.91
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.91
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.91
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.91
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.91
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.91
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.91
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.91
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.91
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.91
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.91
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.91
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.91
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.91
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.91
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.91
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.91
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.91
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.91
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.91
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.91
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.91
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.91
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.91
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.91
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.91
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.9
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.9
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.9
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.9
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.9
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.9
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.9
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.9
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.9
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.9
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.9
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.9
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.9
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.9
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.9
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.9
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.9
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.9
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.9
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.9
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.9
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.9
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.9
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.89
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.89
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.89
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.89
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.89
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.89
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.89
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.89
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.89
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.89
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.89
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.89
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.89
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.89
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.89
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.89
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.89
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.89
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.89
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.88
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.88
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.88
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.88
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.88
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.88
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.87
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.87
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.87
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.87
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.87
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.87
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.87
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.87
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.87
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.87
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.86
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.86
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.86
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.86
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.86
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.85
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.84
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.83
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.83
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.81
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.78
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.75
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.75
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.73
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.73
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.73
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.71
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.7
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.68
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.67
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.66
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.66
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.65
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.64
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.61
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.6
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.53
3mhp_C	26	TIC62_peptide, ferredoxin--NADP reductase, LEAF is	99.51
3mhp_C	26	TIC62_peptide, ferredoxin--NADP reductase, LEAF is	99.37
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.33
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.31
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.29
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.06
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.05
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.02
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.02
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.93
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.92
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.9
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.82
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.79
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.77
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.76
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.73
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.66
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.6
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.59
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.58
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.51
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.48
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.45
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.39
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.37
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.3
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.28
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.25
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.18
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.18
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.17
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.15
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.04
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.97
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.97
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.96
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.95
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.92
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.92
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.91
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.91
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.91
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.89
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.88
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.88
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.87
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.87
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.87
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.85
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.85
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.84
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.82
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.82
1lnq_A	336	MTHK channels, potassium channel related protein;	97.79
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.79
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.78
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.77
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.76
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.75
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.74
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.73
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.73
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.72
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.69
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.69
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.67
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.67
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.66
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.66
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.65
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.65
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.64
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.61
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.61
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.6
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.58
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.56
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.55
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.54
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.54
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.53
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.51
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.51
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.49
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.49
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.49
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.48
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.48
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.47
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.46
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.44
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.44
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.44
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.43
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.42
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.4
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.4
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.39
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.38
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.37
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.37
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.37
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.36
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.36
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.35
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.35
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	97.35
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.3
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.3
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.3
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.28
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.28
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.28
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.27
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.26
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.25
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.23
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.23
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.21
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.21
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.21
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.2
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.15
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.14
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.13
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.13
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.12
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.11
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.1
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	97.1
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.08
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.07
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.05
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.05
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.05
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.04
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.04
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.03
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.02
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.01
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	97.0
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	97.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.97
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.97
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.96
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.95
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	96.95
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.93
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.92
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.91
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	96.9
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.9
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.89
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.89
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.88
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	96.88
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.88
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.87
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.87
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.86
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	96.86
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.86
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.86
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.86
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.85
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.85
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.84
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.84
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.83
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.82
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.81
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.81
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.8
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.8
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.79
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.79
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.78
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.77
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.76
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	96.75
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.75
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.74
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.72
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.7

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=3.9e-32  Score=275.53  Aligned_cols=227  Identities=12%  Similarity=0.044  Sum_probs=185.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+..... +                     .+++++.+|+. .+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---------------------~~~~~~~~Dl~-~~~~~~   58 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I---------------------NDYEYRVSDYT-LEDLIN   58 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------------CCEEEECCCC-HHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C---------------------CceEEEEcccc-HHHHHH
Confidence            478999999999999999999999999999999943322 2                     37899999999 999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLLW  234 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~s  234 (530)
                      +++++|+||||||.....  ++...+++|+.++.+|+++|++.+++||||+||.+++...     .++....+...|+.+
T Consensus        59 ~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s  136 (311)
T 3m2p_A           59 QLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVS  136 (311)
T ss_dssp             HTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHH
T ss_pred             hhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHH
Confidence            999999999999976544  6677899999999999999999999999999998773321     223345667889999


Q ss_pred             HHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHHHHHHHHHHHhCC
Q 009648          235 KRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       235 K~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                      |+++|++++.    .|+++++|||++|||++....           ....+.+........++|+++|+|++++.+++++
T Consensus       137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            9999999875    799999999999999976421           1112222222333446899999999999999987


Q ss_pred             CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       300 ~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .  .+++||+++++..++.++.+++.+++|....
T Consensus       217 ~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~  248 (311)
T 3m2p_A          217 K--VSGTFNIGSGDALTNYEVANTINNAFGNKDN  248 (311)
T ss_dssp             T--CCEEEEECCSCEECHHHHHHHHHHHTTCTTC
T ss_pred             C--CCCeEEeCCCCcccHHHHHHHHHHHhCCCCc
Confidence            5  5899999999999999999999999997653

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=6.6e-33  Score=285.38  Aligned_cols=247  Identities=14%  Similarity=0.054  Sum_probs=192.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+||||++|+++|+++|++|++++|+..........+....        +.....+++++.+|+.|.+++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~~~   94 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV--------STEQWSRFCFIEGDIRDLTTC   94 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTS--------CHHHHTTEEEEECCTTCHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhcc--------ccccCCceEEEEccCCCHHHH
Confidence            457899999999999999999999999999999997754433333222210        000015799999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      .++++++|+||||||....  ...++...+++|+.++.+|+++|++.+++||||+||.+++...     .++.+..+...
T Consensus        95 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~  174 (351)
T 3ruf_A           95 EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSP  174 (351)
T ss_dssp             HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred             HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCCh
Confidence            9999999999999996432  2234556789999999999999999999999999998774322     22334566788


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|+++|++++.    .|+++++|||++|||++.....               ...+.+...+....++||++|+|++
T Consensus       175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  254 (351)
T 3ruf_A          175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM  254 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence            99999999998874    6999999999999999764321               1111222223334468999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++.++.+.....+++|||+++...++.++.+++.+++|..+
T Consensus       255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  295 (351)
T 3ruf_A          255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIH  295 (351)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccc
Confidence            99999884325699999999999999999999999999843

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=6e-32  Score=263.76  Aligned_cols=217  Identities=25%  Similarity=0.310  Sum_probs=173.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCe-EEEEecCCCH
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKR  154 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v-~~v~~Dl~d~  154 (530)
                      ...++|+||||||+||||++|+++|+++|++|++++|+.++...+..                   .++ +++.+|++  
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------------~~~~~~~~~Dl~--   75 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------------RGASDIVVANLE--   75 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------------TTCSEEEECCTT--
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------------CCCceEEEcccH--
Confidence            34678899999999999999999999999999999999988766532                   468 99999999  


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHH
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW  234 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~s  234 (530)
                      +.+.++++++|+||||||....  .++...+++|+.++.+|+++|++.+++|||++||.+....  +..+ .+...|+.+
T Consensus        76 ~~~~~~~~~~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~--~~~~-~~~~~Y~~s  150 (236)
T 3e8x_A           76 EDFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP--DQGP-MNMRHYLVA  150 (236)
T ss_dssp             SCCGGGGTTCSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG--GGSC-GGGHHHHHH
T ss_pred             HHHHHHHcCCCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC--CCCh-hhhhhHHHH
Confidence            7788999999999999996542  4566789999999999999999999999999999766332  1111 456789999


Q ss_pred             HHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCC
Q 009648          235 KRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       235 K~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      |+++|++++..|+++++||||+|+|+....    .+...........+++++|+|++++.+++++. ..+++|++.++. 
T Consensus       151 K~~~e~~~~~~gi~~~~lrpg~v~~~~~~~----~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~v~~~~-  224 (236)
T 3e8x_A          151 KRLADDELKRSSLDYTIVRPGPLSNEESTG----KVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD-  224 (236)
T ss_dssp             HHHHHHHHHHSSSEEEEEEECSEECSCCCS----EEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG-GTTEEEEEEECS-
T ss_pred             HHHHHHHHHHCCCCEEEEeCCcccCCCCCC----eEEeccCCCcccCcEeHHHHHHHHHHHhcCcc-ccCCeEEEeCCC-
Confidence            999999999999999999999999985421    12222222224578999999999999999886 579999999884 


Q ss_pred             CChhHHHHHH
Q 009648          315 APLTPMEELL  324 (530)
Q Consensus       315 ~t~~~i~ell  324 (530)
                      .++.++.+.+
T Consensus       225 ~~~~e~~~~i  234 (236)
T 3e8x_A          225 TPIAKVVEQL  234 (236)
T ss_dssp             EEHHHHHHTC
T ss_pred             cCHHHHHHHh
Confidence            5555555443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.98  E-value=2.4e-32  Score=280.68  Aligned_cols=230  Identities=17%  Similarity=0.085  Sum_probs=185.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+||||++|++.|+++|++|++++|+..+                         .+++++.+|+.|.++
T Consensus        16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------------~~~~~~~~Dl~d~~~   70 (347)
T 4id9_A           16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------------TGGEEVVGSLEDGQA   70 (347)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------------SCCSEEESCTTCHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------------CCccEEecCcCCHHH
Confidence            4567899999999999999999999999999999998742                         467899999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCC-------CCccccccchh
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-------GFPAAILNLFW  229 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~-------~~~~~~~~~~~  229 (530)
                      +.++++++|+||||||.......++...+++|+.++.+|+++|++.++++|||+||.+++..       -.++....+..
T Consensus        71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~  150 (347)
T 4id9_A           71 LSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNS  150 (347)
T ss_dssp             HHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCS
T ss_pred             HHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCC
Confidence            99999999999999997665555557789999999999999999999999999999877443       12233456778


Q ss_pred             HHHHHHHHHHHHHH----HCCCCEEEEEcCccc-------------CCCcccc----------------------cccce
Q 009648          230 GVLLWKRKAEEALI----ASGLPYTIVRPGGME-------------RPTDAYK----------------------ETHNI  270 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~-------------Gp~~~~~----------------------~~~~~  270 (530)
                      .|+.+|+++|++++    +.|+++++|||++||             ||+....                      ....+
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (347)
T 4id9_A          151 PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPS  230 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCC
T ss_pred             hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCe
Confidence            89999999999987    469999999999999             7653210                      01111


Q ss_pred             eecccCcccCCC----CCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          271 TLSQEDTLFGGQ----VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       271 ~~~~~~~~~~g~----V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .+...+....++    ++++|+|++++.+++++. ..+++|||++++..++.++.+++.+++|...
T Consensus       231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  295 (347)
T 4id9_A          231 HILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADEPADFAALLPKIAALTGLPI  295 (347)
T ss_dssp             EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSSCEEHHHHHHHHHHHHCCCE
T ss_pred             EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCCcccHHHHHHHHHHHhCCCC
Confidence            222222333456    999999999999999875 3589999999999999999999999998754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.98  E-value=8.1e-32  Score=275.65  Aligned_cols=232  Identities=16%  Similarity=0.096  Sum_probs=177.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+|+||||||+||||++|+++|+++|++|++++|+..+...+.                   ..+++++.+|+.|.+++.
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------------------~~~~~~~~~Dl~d~~~~~   72 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-------------------YLEPECRVAEMLDHAGLE   72 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-------------------GGCCEEEECCTTCHHHHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-------------------cCCeEEEEecCCCHHHHH
Confidence            3468999999999999999999999999999999876543221                   137899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC------Cccccccc----h
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNL----F  228 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~------~~~~~~~~----~  228 (530)
                      ++++++|+||||||.......++...+++|+.++.+|+++|.+++++||||+||.+++...      .++.+..+    .
T Consensus        73 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~  152 (342)
T 2x4g_A           73 RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK  152 (342)
T ss_dssp             HHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTS
T ss_pred             HHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccccc
Confidence            9999999999999965544456678899999999999999999999999999998774321      22333445    6


Q ss_pred             hHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCc-ccccccce-eeccc-----CcccCCCCCHHHHHHHHHHHHhC
Q 009648          229 WGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD-AYKETHNI-TLSQE-----DTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~-~~~~~~~~-~~~~~-----~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      ..|+.+|+++|++++.   .|+++++|||++|||++. .......+ .+..+     +....++++++|+|++++.++++
T Consensus       153 ~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  232 (342)
T 2x4g_A          153 SSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALER  232 (342)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhC
Confidence            7899999999999875   399999999999999976 21000000 00001     11223579999999999999998


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +. . +++||++++. .++.++.+++.+++|...
T Consensus       233 ~~-~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~  263 (342)
T 2x4g_A          233 GR-I-GERYLLTGHN-LEMADLTRRIAELLGQPA  263 (342)
T ss_dssp             SC-T-TCEEEECCEE-EEHHHHHHHHHHHHTCCC
T ss_pred             CC-C-CceEEEcCCc-ccHHHHHHHHHHHhCCCC
Confidence            76 2 8999999999 999999999999998754

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.98  E-value=1e-31  Score=276.01  Aligned_cols=239  Identities=13%  Similarity=0.079  Sum_probs=185.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +.++|+|||||||||||++|+++|+++|  ++|++++|....  ...+               .......+++++.+|+.
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l---------------~~~~~~~~~~~~~~Dl~   85 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNV---------------KSIQDHPNYYFVKGEIQ   85 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGG---------------TTTTTCTTEEEEECCTT
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhh---------------hhhccCCCeEEEEcCCC
Confidence            3567899999999999999999999999  788888876421  1111               01122368999999999


Q ss_pred             CHhhHHHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC------Ccc
Q 009648          153 KRVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPA  222 (530)
Q Consensus       153 d~~sl~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~------~~~  222 (530)
                      |.+.+.+++++  +|+||||||....  ...++...+++|+.++.+|+++|++.+++||||+||.+++...      .++
T Consensus        86 d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~  165 (346)
T 4egb_A           86 NGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE  165 (346)
T ss_dssp             CHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT
T ss_pred             CHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC
Confidence            99999999987  9999999996532  2345677899999999999999999999999999998764332      223


Q ss_pred             ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~D  287 (530)
                      .+..+...|+.+|+++|++++.    .|+++++|||++|||++....           ....+.+...+....++||++|
T Consensus       166 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  245 (346)
T 4egb_A          166 TPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD  245 (346)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHH
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHH
Confidence            4456678899999999999875    699999999999999976321           1111222222333447899999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +|++++.+++++.  .+++|||+++...++.++.+++.+++|...
T Consensus       246 va~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  288 (346)
T 4egb_A          246 HCSAIDVVLHKGR--VGEVYNIGGNNEKTNVEVVEQIITLLGKTK  288 (346)
T ss_dssp             HHHHHHHHHHHCC--TTCEEEECCSCCEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHHHHhcCC--CCCEEEECCCCceeHHHHHHHHHHHhCCCc
Confidence            9999999999876  589999999999999999999999999854

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.98  E-value=1.9e-31  Score=257.85  Aligned_cols=211  Identities=18%  Similarity=0.136  Sum_probs=166.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+|+||||||+||||++|+++|+++|++|++++|+..+...+                    ..+++++.+|+.|.+++.
T Consensus         3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~Dl~d~~~~~   62 (227)
T 3dhn_A            3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------------------NEHLKVKKADVSSLDEVC   62 (227)
T ss_dssp             CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------------------CTTEEEECCCTTCHHHHH
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------------------cCceEEEEecCCCHHHHH
Confidence            357999999999999999999999999999999998653221                    268999999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC----CccccccchhHHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGVLLW  234 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~----~~~~~~~~~~~Y~~s  234 (530)
                      ++++++|+||||||.....    ...+++|+.++.+|+++|++.+++||||+||.++....    ..+....+...|+.+
T Consensus        63 ~~~~~~d~vi~~a~~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~s  138 (227)
T 3dhn_A           63 EVCKGADAVISAFNPGWNN----PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGV  138 (227)
T ss_dssp             HHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHH
T ss_pred             HHhcCCCEEEEeCcCCCCC----hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHH
Confidence            9999999999999865221    23688999999999999999999999999998763321    112334567789999


Q ss_pred             HHHHHHHHH----HCCCCEEEEEcCcccCCCcccccccceeecccCc----ccCCCCCHHHHHHHHHHHHhCCCCCCCcE
Q 009648          235 KRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT----LFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (530)
Q Consensus       235 K~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~----~~~g~V~v~DVA~ai~~ll~~~~~~~g~v  306 (530)
                      |+.+|.+++    +.|+++++|||++|||++....   .+.......    ...++++++|||++++.+++++. ..+++
T Consensus       139 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-~~g~~  214 (227)
T 3dhn_A          139 KALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG---RYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK-HHQER  214 (227)
T ss_dssp             HHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC---CCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC-CCSEE
T ss_pred             HHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc---ceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc-ccCcE
Confidence            999996664    4789999999999999875321   111111111    11457999999999999999988 68999


Q ss_pred             EEEeCCCCCCh
Q 009648          307 VEVIAETTAPL  317 (530)
Q Consensus       307 ynv~~~~~~t~  317 (530)
                      |++++++..++
T Consensus       215 ~~~~~~~~~~~  225 (227)
T 3dhn_A          215 FTIGYLEHHHH  225 (227)
T ss_dssp             EEEECCSCCC-
T ss_pred             EEEEeehhccc
Confidence            99999987654

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.98  E-value=1e-31  Score=275.09  Aligned_cols=244  Identities=13%  Similarity=0.073  Sum_probs=188.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |.++|+||||||+||||++|++.|+++|++|++++|+..+.....+.+...            ...+++++.+|+.|.++
T Consensus         2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~   69 (341)
T 3enk_A            2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI------------TGKTPAFHETDVSDERA   69 (341)
T ss_dssp             CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH------------HSCCCEEECCCTTCHHH
T ss_pred             CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh------------cCCCceEEEeecCCHHH
Confidence            345689999999999999999999999999999999877655544443322            02578999999999999


Q ss_pred             HHHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccccc
Q 009648          157 IEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL  227 (530)
Q Consensus       157 l~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~  227 (530)
                      +.++++  ++|+||||||....  ...+....+++|+.++.+|+++|++.++++|||+||.+++...     .++....+
T Consensus        70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  149 (341)
T 3enk_A           70 LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSA  149 (341)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred             HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence            999997  89999999996532  2223446789999999999999999999999999998764221     12234556


Q ss_pred             hhHHHHHHHHHHHHHHH----C-CCCEEEEEcCcccCCCcccc----------------------cccceeecc------
Q 009648          228 FWGVLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDAYK----------------------ETHNITLSQ------  274 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~----~-gl~~tIvRPg~V~Gp~~~~~----------------------~~~~~~~~~------  274 (530)
                      ...|+.+|+++|++++.    . ++++++|||++|||++....                      ....+.+..      
T Consensus       150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  229 (341)
T 3enk_A          150 TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP  229 (341)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred             CChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence            67899999999999874    3 59999999999999854210                      001111111      


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .+....++||++|+|++++.++++.. ...+++|||++++..++.++.+++.+++|...
T Consensus       230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  288 (341)
T 3enk_A          230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV  288 (341)
T ss_dssp             TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCC
T ss_pred             CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCc
Confidence            22233468999999999999998621 13589999999999999999999999998754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.97  E-value=3.5e-32  Score=282.40  Aligned_cols=238  Identities=16%  Similarity=0.190  Sum_probs=187.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~  154 (530)
                      .+++|+||||||+||||++|+++|+++ |++|++++|+..+...+.                  ...+++++.+|+. |.
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~v~~~~~Dl~~d~   82 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV------------------KHERMHFFEGDITINK   82 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG------------------GSTTEEEEECCTTTCH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc------------------cCCCeEEEeCccCCCH
Confidence            455789999999999999999999998 999999999986544321                  1268999999999 99


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccccc--
Q 009648          155 VQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAIL--  225 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~~~--  225 (530)
                      +.+.++++++|+||||||.....  ..+....+++|+.++.+|+++|++.+ +||||+||.+++....     ++...  
T Consensus        83 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~  161 (372)
T 3slg_A           83 EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALT  161 (372)
T ss_dssp             HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEE
T ss_pred             HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccc
Confidence            99999999999999999965432  23445678999999999999999999 8999999987643321     11111  


Q ss_pred             -----cchhHHHHHHHHHHHHHHHC---CCCEEEEEcCcccCCCcccc-------------------cccceeecccCcc
Q 009648          226 -----NLFWGVLLWKRKAEEALIAS---GLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTL  278 (530)
Q Consensus       226 -----~~~~~Y~~sK~~~E~~l~~~---gl~~tIvRPg~V~Gp~~~~~-------------------~~~~~~~~~~~~~  278 (530)
                           .+.+.|+.+|+++|++++..   |+++++|||++|||++....                   ....+.+...+..
T Consensus       162 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  241 (372)
T 3slg_A          162 YGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ  241 (372)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCC
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCce
Confidence                 45668999999999999875   99999999999999975320                   1111222222233


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCC-CCCChhHHHHHHHhcCCCCCC
Q 009648          279 FGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~-~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ..++||++|+|++++.+++++.. ..+++|||+++ ...++.++.+++.+++|....
T Consensus       242 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~  298 (372)
T 3slg_A          242 KRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE  298 (372)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred             EEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence            34689999999999999998631 35899999994 789999999999999987543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.97  E-value=6.6e-31  Score=274.67  Aligned_cols=232  Identities=15%  Similarity=0.035  Sum_probs=184.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+||||++|+++|+++|++|++++|+..+...+                   ...+++++.+|+.|.+++.
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~v~~~~~Dl~d~~~~~   88 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------------DMFCDEFHLVDLRVMENCL   88 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------------GGTCSEEEECCTTSHHHHH
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------------ccCCceEEECCCCCHHHHH
Confidence            467999999999999999999999999999999987542211                   1247899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCc---cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC----------Cccc--
Q 009648          159 PALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----------FPAA--  223 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~---~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~----------~~~~--  223 (530)
                      ++++++|+||||||.....   ..++...+++|+.++.+|+++|++.++++|||+||.+++...          .++.  
T Consensus        89 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~  168 (379)
T 2c5a_A           89 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  168 (379)
T ss_dssp             HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             HHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence            9999999999999965321   345567789999999999999999999999999998763321          1111  


Q ss_pred             cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccc-eeecccCcccCCCC
Q 009648          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THN-ITLSQEDTLFGGQV  283 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~-~~~~~~~~~~~g~V  283 (530)
                      ...+...|+.+|+++|++++.    .|+++++|||++|||++.....               ... +.+...+....+++
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (379)
T 2c5a_A          169 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT  248 (379)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEE
Confidence            345567899999999998864    5999999999999999754210               011 22222223344789


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      |++|+|++++.+++++.   +++||++++...++.++.+++.+++|...
T Consensus       249 ~v~Dva~ai~~~l~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  294 (379)
T 2c5a_A          249 FIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKL  294 (379)
T ss_dssp             EHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCC
T ss_pred             EHHHHHHHHHHHhhccC---CCeEEeCCCCccCHHHHHHHHHHHhCCCC
Confidence            99999999999998763   78999999999999999999999998753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.97  E-value=3.7e-31  Score=255.28  Aligned_cols=212  Identities=21%  Similarity=0.303  Sum_probs=172.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC-HhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~sl~~  159 (530)
                      |+||||||+||||++|+++|+++|++|++++|+.++...                     ..+++++.+|+.| .+++.+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------------------~~~~~~~~~D~~d~~~~~~~   59 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------------------YNNVKAVHFDVDWTPEEMAK   59 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------------------CTTEEEEECCTTSCHHHHHT
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------------------cCCceEEEecccCCHHHHHH
Confidence            489999999999999999999999999999999864321                     1679999999999 999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-ccccccchhHHHHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-PAAILNLFWGVLLWKRKA  238 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-~~~~~~~~~~Y~~sK~~~  238 (530)
                      +++++|+||||||....      ..+++|+.++.+++++|++.++++||++||.++..... .+....+...|+.+|+++
T Consensus        60 ~~~~~d~vi~~ag~~~~------~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~  133 (219)
T 3dqp_A           60 QLHGMDAIINVSGSGGK------SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFA  133 (219)
T ss_dssp             TTTTCSEEEECCCCTTS------SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHH
T ss_pred             HHcCCCEEEECCcCCCC------CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHH
Confidence            99999999999997542      36788999999999999999999999999986633210 002234567899999999


Q ss_pred             HHHH-HHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCCh
Q 009648          239 EEAL-IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (530)
Q Consensus       239 E~~l-~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~  317 (530)
                      |+++ +..|++|++||||++||+....    .+.++   .....+++++|+|++++.++.++. ..+++|||.++.    
T Consensus       134 e~~~~~~~~i~~~ilrp~~v~g~~~~~----~~~~~---~~~~~~i~~~Dva~~i~~~l~~~~-~~g~~~~i~~g~----  201 (219)
T 3dqp_A          134 DLYLTKETNLDYTIIQPGALTEEEATG----LIDIN---DEVSASNTIGDVADTIKELVMTDH-SIGKVISMHNGK----  201 (219)
T ss_dssp             HHHHHHSCCCEEEEEEECSEECSCCCS----EEEES---SSCCCCEEHHHHHHHHHHHHTCGG-GTTEEEEEEECS----
T ss_pred             HHHHHhccCCcEEEEeCceEecCCCCC----ccccC---CCcCCcccHHHHHHHHHHHHhCcc-ccCcEEEeCCCC----
Confidence            9999 7789999999999999985421    12221   344578999999999999999876 468999998875    


Q ss_pred             hHHHHHHHhcCCCC
Q 009648          318 TPMEELLAKIPSQR  331 (530)
Q Consensus       318 ~~i~ell~~v~g~~  331 (530)
                      .++.|++....+..
T Consensus       202 ~~~~e~~~~~~~~~  215 (219)
T 3dqp_A          202 TAIKEALESLLEHH  215 (219)
T ss_dssp             EEHHHHHHTTTTTC
T ss_pred             ccHHHHHHHHHHhh
Confidence            56666666655543

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.97  E-value=1.4e-31  Score=270.66  Aligned_cols=230  Identities=15%  Similarity=0.067  Sum_probs=183.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|+.......                   ...+++++.+|+.|.+ +.++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dl~d~~-~~~~   60 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------------------VNPSAELHVRDLKDYS-WGAG   60 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------------------SCTTSEEECCCTTSTT-TTTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------------------cCCCceEEECccccHH-HHhh
Confidence            5899999999999999999999999999999987543221                   1267899999999988 8888


Q ss_pred             hCCCcEEEEcccCC--CCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHH
Q 009648          161 LGNASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~--~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~  233 (530)
                      +++ |+||||||..  .....++...+++|+.++.+|+++|++.++++|||+||.+++...     .++....+...|+.
T Consensus        61 ~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~  139 (312)
T 3ko8_A           61 IKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGA  139 (312)
T ss_dssp             CCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             cCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHH
Confidence            888 9999999953  233445567789999999999999999999999999998774322     12344566788999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc----------c-cceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------T-HNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       234 sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~----------~-~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +|+++|++++.    .|+++++|||++|||++.....          . ..+.+...+....+++|++|+|++++.++++
T Consensus       140 sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          140 AKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            99999998874    5999999999999999754210          0 1111222233345689999999999999987


Q ss_pred             ---CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          299 ---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       299 ---~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                         .. ..+++||++++...++.++.+++.+++|...
T Consensus       220 ~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  255 (312)
T 3ko8_A          220 FEEMD-APFLALNVGNVDAVRVLDIAQIVAEVLGLRP  255 (312)
T ss_dssp             HHHSC-CSEEEEEESCSSCEEHHHHHHHHHHHHTCCC
T ss_pred             ccccC-CCCcEEEEcCCCceeHHHHHHHHHHHhCCCC
Confidence               33 3689999999999999999999999998765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=1.8e-30  Score=253.57  Aligned_cols=225  Identities=27%  Similarity=0.395  Sum_probs=178.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++|+||||||+||||++|+++|+++  |++|++++|+..+...+                    ..+++++.+|+.|.++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~D~~d~~~   62 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------------GGEADVFIGDITDADS   62 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------------TCCTTEEECCTTSHHH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------------------CCCeeEEEecCCCHHH
Confidence            4679999999999999999999999  89999999987654332                    1467889999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCc---------------cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc
Q 009648          157 IEPALGNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~---------------~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +.++++++|+||||||.....               ..++...+++|+.++.+++++|++.++++||++||.++..... 
T Consensus        63 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~-  141 (253)
T 1xq6_A           63 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH-  141 (253)
T ss_dssp             HHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC-
T ss_pred             HHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC-
Confidence            999999999999999864321               1112345799999999999999999999999999987643221 


Q ss_pred             cccccch--hHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcc---cCCCCCHHHHHHHHHHHH
Q 009648          222 AAILNLF--WGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL---FGGQVSNLQVAELLACMA  296 (530)
Q Consensus       222 ~~~~~~~--~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~---~~g~V~v~DVA~ai~~ll  296 (530)
                        ...++  ..|+.+|+++|+++++.|+++++||||++||+.....   .+........   ...+++++|+|+++++++
T Consensus       142 --~~~~~~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          142 --PLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELLVGKDDELLQTDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             --GGGGGGGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS---CEEEESTTGGGGSSCCEEEHHHHHHHHHHHT
T ss_pred             --ccccccchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh---hhhccCCcCCcCCCCcEEcHHHHHHHHHHHH
Confidence              12222  3488899999999999999999999999999865321   1111111111   134799999999999999


Q ss_pred             hCCCCCCCcEEEEeCCC---CCChhHHHHHHHhcCCC
Q 009648          297 KNRSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       297 ~~~~~~~g~vynv~~~~---~~t~~~i~ell~~v~g~  330 (530)
                      +++. ..+++|||.++.   ..++.++.+++.+++|+
T Consensus       217 ~~~~-~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          217 LFEE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             TCGG-GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             cCcc-ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            8865 468899999974   48999999999999885

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.97  E-value=1.6e-30  Score=268.25  Aligned_cols=246  Identities=13%  Similarity=0.037  Sum_probs=185.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+||||++|+++|+++|++|++++|+........+.+... +       ......+++++.+|+.|.+++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~Dl~d~~~~   96 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSL-V-------SEKQWSNFKFIQGDIRNLDDC   96 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-S-------CHHHHTTEEEEECCTTSHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhh-c-------ccccCCceEEEECCCCCHHHH
Confidence            34679999999999999999999999999999999764211111111110 0       000015789999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      .++++++|+||||||....  ...++...+++|+.++.+|+++|++.++++|||+||.+++...     .++.+..+...
T Consensus        97 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~  176 (352)
T 1sb8_A           97 NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP  176 (352)
T ss_dssp             HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred             HHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCCh
Confidence            9999999999999996432  2234566789999999999999999999999999998774322     12233456778


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|+++|++++.    .|+++++|||++|||++.....               ...+.+...+....++++++|+|++
T Consensus       177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a  256 (352)
T 1sb8_A          177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA  256 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence            99999999999864    5999999999999999753210               0011111222233468999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcC---CCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP---SQR  331 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~---g~~  331 (530)
                      ++.++.+.....+++|||+++...++.++.+++.+++   |..
T Consensus       257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~  299 (352)
T 1sb8_A          257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVS  299 (352)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCC
Confidence            9999987322468999999999999999999999999   654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.97  E-value=7e-31  Score=272.12  Aligned_cols=242  Identities=14%  Similarity=0.026  Sum_probs=185.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh--CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK--LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~--~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|+||||||+||||++|+++|++  +|++|++++|+..............  ..    .......+++++.+|+.|.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~Dl~d~~   81 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSL--GH----FKNLIGFKGEVIAADINNPL   81 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCC--CC----GGGGTTCCSEEEECCTTCHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhh--hh----hhhccccCceEEECCCCCHH
Confidence            4578999999999999999999999  9999999999765211110000000  00    00011256799999999999


Q ss_pred             hHHHH-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC----CccccccchhH
Q 009648          156 QIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWG  230 (530)
Q Consensus       156 sl~~a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~----~~~~~~~~~~~  230 (530)
                      ++.++ +.++|+||||||.......++...+++|+.++.+|+++|++.+++ |||+||.+++...    .++....+...
T Consensus        82 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~  160 (362)
T 3sxp_A           82 DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENV  160 (362)
T ss_dssp             HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSH
T ss_pred             HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCCh
Confidence            99999 889999999999766555667788999999999999999999985 9999997763322    22334567788


Q ss_pred             HHHHHHHHHHHHHHCC--CCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHHHHHH
Q 009648          231 VLLWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       231 Y~~sK~~~E~~l~~~g--l~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                      |+.+|+++|++++...  +++++|||++||||+.....               ...+.+...+....++|+++|||++++
T Consensus       161 Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~  240 (362)
T 3sxp_A          161 YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV  240 (362)
T ss_dssp             HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHH
Confidence            9999999999999755  88999999999999864321               011112122233346899999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      .+++++.  .| +|||+++...++.++.+++.++++
T Consensus       241 ~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          241 KAMKAQK--SG-VYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             HHTTCSS--CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             HHHhcCC--CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence            9998875  35 999999999999999999999999

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.97  E-value=6.9e-31  Score=266.34  Aligned_cols=229  Identities=15%  Similarity=0.069  Sum_probs=179.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|+.|.+..|+......                    ...+++++.+|+.| +++.++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~--------------------~~~~~~~~~~Dl~~-~~~~~~   60 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--------------------VNEAARLVKADLAA-DDIKDY   60 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG--------------------SCTTEEEECCCTTT-SCCHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh--------------------cCCCcEEEECcCCh-HHHHHH
Confidence            589999999999999999999999544444444332211                    12578999999999 899999


Q ss_pred             hCCCcEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHH
Q 009648          161 LGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~  233 (530)
                      ++++|+||||||...  ....++...+++|+.++.+|+++|++.++++|||+||.+++...     .++....+...|+.
T Consensus        61 ~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~  140 (313)
T 3ehe_A           61 LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGA  140 (313)
T ss_dssp             HTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             hcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHH
Confidence            999999999998542  23445667899999999999999999999999999998774322     12234566778999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc----------cc-cceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK----------ET-HNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       234 sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~----------~~-~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +|+++|++++.    .|+++++|||++|||++....          .. ..+.+...+....++||++|+|++++.++++
T Consensus       141 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          141 SKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            99999998864    699999999999999975421          01 1122223333445789999999999999984


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .  ..+++|||++++..++.++.+++.+++|...
T Consensus       221 ~--~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  252 (313)
T 3ehe_A          221 D--ERVNIFNIGSEDQIKVKRIAEIVCEELGLSP  252 (313)
T ss_dssp             C--SSEEEEECCCSCCEEHHHHHHHHHHHTTCCC
T ss_pred             C--CCCceEEECCCCCeeHHHHHHHHHHHhCCCC
Confidence            4  3589999999999999999999999998764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.97  E-value=1.5e-30  Score=264.17  Aligned_cols=229  Identities=11%  Similarity=0.081  Sum_probs=181.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.++||||||+||||++|+++|+++|++|++++|+... ..                      -+++++.+|+.|.+++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----------------------l~~~~~~~Dl~d~~~~   66 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----------------------PNVEMISLDIMDSQRV   66 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----------------------TTEEEEECCTTCHHHH
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----------------------ceeeEEECCCCCHHHH
Confidence            456799999999999999999999999999999998642 10                      1688999999999999


Q ss_pred             HHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC-------Cccccc
Q 009648          158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-------FPAAIL  225 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~-------~~~~~~  225 (530)
                      .+++++  +|+||||||....  ...++...+++|+.++.+|+++|.+. ++++|||+||.+++...       .++.+.
T Consensus        67 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~  146 (321)
T 2pk3_A           67 KKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL  146 (321)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred             HHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence            999976  9999999996542  23355678999999999999999876 68999999998764321       122334


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------c--cceeecccCcccCCCCCH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------T--HNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~--~~~~~~~~~~~~~g~V~v  285 (530)
                      .+...|+.+|+++|++++.    .|+++++|||++|||++.....              .  ..+.+........+++++
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v  226 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV  226 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence            5677899999999999875    3999999999999999764210              0  011111122233457999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +|+|++++.+++++.  .+++||++++...++.++.+++.+++|..
T Consensus       227 ~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  270 (321)
T 2pk3_A          227 RDIVQAYWLLSQYGK--TGDVYNVCSGIGTRIQDVLDLLLAMANVK  270 (321)
T ss_dssp             HHHHHHHHHHHHHCC--TTCEEEESCSCEEEHHHHHHHHHHHSSSC
T ss_pred             HHHHHHHHHHHhCCC--CCCeEEeCCCCCeeHHHHHHHHHHHhCCC
Confidence            999999999998873  58999999999899999999999999864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.97  E-value=1.3e-30  Score=266.82  Aligned_cols=238  Identities=14%  Similarity=0.092  Sum_probs=180.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+||||||+||||++|++.|+++|++|++++|+. .......+.+..              .++++++.+|+.|.+++.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--------------~~~~~~~~~Dl~d~~~~~~   67 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--------------LGNFEFVHGDIRNKNDVTR   67 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--------------TCCCEEEECCTTCHHHHHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--------------CCceEEEEcCCCCHHHHHH
Confidence            6899999999999999999999999999999853 222221122211              1468999999999999999


Q ss_pred             HhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCccCCC---------------
Q 009648          160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG---------------  219 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v~~~~---------------  219 (530)
                      ++++  +|+||||||....  ...++...+++|+.++.+|+++|++.+++ +|||+||.+++...               
T Consensus        68 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           68 LITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             HHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9988  9999999996532  12345667899999999999999999885 99999998764321               


Q ss_pred             ------CccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cc-----ce
Q 009648          220 ------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-----NI  270 (530)
Q Consensus       220 ------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~-----~~  270 (530)
                            .++....+...|+.+|+++|++++.    .|+++++|||++|||++.....              ..     .+
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  227 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCe
Confidence                  1112344677899999999999875    4999999999999999753210              00     11


Q ss_pred             eecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCC--CCChhHHHHHHHhcCCCCC
Q 009648          271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       271 ~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~--~~t~~~i~ell~~v~g~~~  332 (530)
                      .+...+....++++++|+|++++.++++.....+++||++++.  ..++.++.+++.+++|...
T Consensus       228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~  291 (347)
T 1orr_A          228 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM  291 (347)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             EEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence            1111222233579999999999999986221357899999986  3899999999999998653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.97  E-value=3.8e-31  Score=265.15  Aligned_cols=224  Identities=18%  Similarity=0.131  Sum_probs=178.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||| +||||++|++.|+++|++|++++|+.++.                       ..+++++.+|+.|.+++.+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------------~~~~~~~~~Dl~d~~~~~~   58 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------------PAGVQTLIADVTRPDTLAS   58 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------------CTTCCEEECCTTCGGGCTT
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------------ccCCceEEccCCChHHHHH
Confidence            56899999 59999999999999999999999987531                       2578999999999999999


Q ss_pred             HhCC-CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHH
Q 009648          160 ALGN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (530)
Q Consensus       160 a~~~-vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~  233 (530)
                      ++++ +|+||||||...   .+....+++|+.++.+|+++|++.+++||||+||.+++...     .++....+...|+.
T Consensus        59 ~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~  135 (286)
T 3gpi_A           59 IVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGK  135 (286)
T ss_dssp             GGGGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHH
T ss_pred             hhcCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhH
Confidence            9987 999999998632   34456788999999999999999999999999998774322     22344566788999


Q ss_pred             HHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccce--eecccCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEe
Q 009648          234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVI  310 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~--~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~  310 (530)
                      +|+++|++ ++. +++++|||++|||++.........  ..........++||++|+|++++.+++++. ...+++||++
T Consensus       136 sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~  213 (286)
T 3gpi_A          136 RMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVT  213 (286)
T ss_dssp             HHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             HHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence            99999999 777 999999999999998652111111  111222334468999999999999999841 1358999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCC
Q 009648          311 AETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       311 ~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++...++.++.+++.+++|...
T Consensus       214 ~~~~~s~~e~~~~i~~~~g~~~  235 (286)
T 3gpi_A          214 DNQPLPVHDLLRWLADRQGIAY  235 (286)
T ss_dssp             CSCCEEHHHHHHHHHHHTTCCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCCC
Confidence            9999999999999999999764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.97  E-value=3.1e-30  Score=263.54  Aligned_cols=235  Identities=11%  Similarity=0.030  Sum_probs=181.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +|+||||||+||||++|+++|+++|  ++|++++|+..  ....+.               ......+++++.+|+.|.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~d~~   67 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLK---------------DLEDDPRYTFVKGDVADYE   67 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGT---------------TTTTCTTEEEEECCTTCHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHh---------------hhccCCceEEEEcCCCCHH
Confidence            4689999999999999999999996  99999999742  111110               0011357999999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCC-CEEEEEcCCCccCCC-----Cccccccc
Q 009648          156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNL  227 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~r~V~iSS~~v~~~~-----~~~~~~~~  227 (530)
                      ++.+++.++|+||||||....  ...++...+++|+.++.+|+++|.+.+. +||||+||.+++...     .++....+
T Consensus        68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           68 LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence            999999999999999996532  2235567799999999999999998875 699999998763221     12234556


Q ss_pred             hhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecccCcccCCCCCHHHHHHHH
Q 009648          228 FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                      ...|+.+|+++|++++.    .|+++++|||++|||++.....           ...+.+...+....++++++|+|+++
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  227 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAI  227 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHH
Confidence            77899999999998874    6999999999999999753110           01111112222334679999999999


Q ss_pred             HHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          293 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       293 ~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +.+++++.  .+++||++++...++.++.+++.+++|..
T Consensus       228 ~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  264 (336)
T 2hun_A          228 ELVLLKGE--SREIYNISAGEEKTNLEVVKIILRLMGKG  264 (336)
T ss_dssp             HHHHHHCC--TTCEEEECCSCEECHHHHHHHHHHHTTCC
T ss_pred             HHHHhCCC--CCCEEEeCCCCcccHHHHHHHHHHHhCCC
Confidence            99998764  58899999999899999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.97  E-value=1.5e-30  Score=267.08  Aligned_cols=234  Identities=16%  Similarity=0.056  Sum_probs=182.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +|+||||||+||||++|+++|+++  |++|++++|+...  ...+    ..            ....+++++.+|+.|.+
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~------------~~~~~~~~~~~Dl~d~~   67 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EA------------ILGDRVELVVGDIADAE   67 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GG------------GCSSSEEEEECCTTCHH
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH----hh------------hccCCeEEEECCCCCHH
Confidence            478999999999999999999998  8999999997531  1111    00            01257999999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC--------------
Q 009648          156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--------------  219 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~--------------  219 (530)
                      ++.++++++|+||||||....  ...++...+++|+.++.+|+++|.+.++ +|||+||.+++...              
T Consensus        68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           68 LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccC
Confidence            999999999999999996532  2235567799999999999999999988 99999998763211              


Q ss_pred             ---CccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecccCcccCC
Q 009648          220 ---FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGG  281 (530)
Q Consensus       220 ---~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~~~~g  281 (530)
                         .++....+...|+.+|+++|++++.    .|+++++|||++|||++.....           ...+.+........+
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  226 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEe
Confidence               1112345667899999999998874    5999999999999999753110           011111122223346


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +++++|+|++++.+++++.  .+++||++++...++.++.+++.+++|...
T Consensus       227 ~i~v~Dva~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~  275 (348)
T 1oc2_A          227 WIHTNDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPK  275 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred             eEEHHHHHHHHHHHhhCCC--CCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence            7999999999999998764  588999999998999999999999998754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.97  E-value=4.6e-30  Score=262.66  Aligned_cols=234  Identities=16%  Similarity=0.066  Sum_probs=182.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC---C---CeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL---G---FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~---G---~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      |+||||||+||||++|+++|+++   |   ++|++++|+...  ...+.    .+           ....+++++.+|+.
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~   65 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA----PV-----------DADPRLRFVHGDIR   65 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG----GG-----------TTCTTEEEEECCTT
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh----hc-----------ccCCCeEEEEcCCC
Confidence            57999999999999999999997   8   999999996521  11110    00           11257999999999


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccc
Q 009648          153 KRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL  225 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~  225 (530)
                      |.+++.+++.++|+||||||....  ...++...+++|+.++.+|+++|.+.+++||||+||.+++...     .++...
T Consensus        66 d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  145 (337)
T 1r6d_A           66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (337)
T ss_dssp             CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCC
Confidence            999999999999999999996532  1235567799999999999999999999999999998763321     122334


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .+...|+.+|+++|++++.    .|+++++|||++|||++....           ....+.+...+.....+++++|+|+
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (337)
T 1r6d_A          146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (337)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHH
Confidence            5677899999999998864    599999999999999975311           0111111122223346799999999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +++.+++++.  .+++||++++...++.++.+++.+++|..
T Consensus       226 a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  264 (337)
T 1r6d_A          226 GIALVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGAD  264 (337)
T ss_dssp             HHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHhCCC--CCCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            9999998764  58899999999899999999999999875

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.97  E-value=7.4e-30  Score=255.03  Aligned_cols=214  Identities=19%  Similarity=0.220  Sum_probs=175.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+||||||+||||++|+++|+++  |++|++++|+..+...+..                   .+++++.+|+.|.+++.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------------------~~~~~~~~D~~d~~~l~   61 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------------------QGVEVRHGDYNQPESLQ   61 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------------------cCCeEEEeccCCHHHHH
Confidence            46999999999999999999999  9999999999876654421                   46889999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~  238 (530)
                      ++++++|+||||||...    +    .++|+.++.+++++|++.+++||||+||.++..        . ...|+.+|+++
T Consensus        62 ~~~~~~d~vi~~a~~~~----~----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------~-~~~y~~~K~~~  124 (287)
T 2jl1_A           62 KAFAGVSKLLFISGPHY----D----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------S-IIPLAHVHLAT  124 (287)
T ss_dssp             HHTTTCSEEEECCCCCS----C----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------C-CSTHHHHHHHH
T ss_pred             HHHhcCCEEEEcCCCCc----C----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------C-CCchHHHHHHH
Confidence            99999999999998521    1    167999999999999999999999999987731        1 13699999999


Q ss_pred             HHHHHHCCCCEEEEEcCcccCCC-ccccc----ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          239 EEALIASGLPYTIVRPGGMERPT-DAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       239 E~~l~~~gl~~tIvRPg~V~Gp~-~~~~~----~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      |+++++.|+++++|||++++|+. ..+..    ........ +.....+++++|+|++++.+++++. ..+++||++++.
T Consensus       125 E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~  202 (287)
T 2jl1_A          125 EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNA-GSGIVNSVTRNELALAAATVLTEEG-HENKTYNLVSNQ  202 (287)
T ss_dssp             HHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESC-TTCCBCCBCHHHHHHHHHHHHTSSS-CTTEEEEECCSS
T ss_pred             HHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCceeccC-CCCccCccCHHHHHHHHHHHhcCCC-CCCcEEEecCCC
Confidence            99999999999999999998764 21110    11111211 2233478999999999999998865 368899999998


Q ss_pred             CCChhHHHHHHHhcCCCCC
Q 009648          314 TAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       314 ~~t~~~i~ell~~v~g~~~  332 (530)
                      ..++.++.+++.+++|...
T Consensus       203 ~~s~~e~~~~i~~~~g~~~  221 (287)
T 2jl1_A          203 PWTFDELAQILSEVSGKKV  221 (287)
T ss_dssp             CBCHHHHHHHHHHHHSSCC
T ss_pred             cCCHHHHHHHHHHHHCCcc
Confidence            8999999999999998753

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.97  E-value=2.3e-30  Score=263.79  Aligned_cols=233  Identities=17%  Similarity=0.103  Sum_probs=180.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ||+||||||+||||++|+++|+++|++|++++|+.......                   -..+++++.+|+.|.+++.+
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~~~~~~~~   61 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA-------------------ITEGAKFYNGDLRDKAFLRD   61 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-------------------SCTTSEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh-------------------cCCCcEEEECCCCCHHHHHH
Confidence            36899999999999999999999999999999976432110                   01378999999999999999


Q ss_pred             HhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      +++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++++|||+||.+++...     .++.+..+...
T Consensus        62 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           62 VFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             HHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            998  89999999996532  1234566789999999999999999999999999998774321     12233456778


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-------cc--------------cceeecc------cCccc
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------ET--------------HNITLSQ------EDTLF  279 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-------~~--------------~~~~~~~------~~~~~  279 (530)
                      |+.+|+++|++++.    .|+++++|||++|||++....       ..              ..+.+..      .+...
T Consensus       142 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            99999999999875    589999999999999862100       00              0111111      11223


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCC-CCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~-~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .++||++|+|++++.+++++.. ..+++||++++...++.++.+++.+++|..
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~  274 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHE  274 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSC
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            3679999999999999986431 137899999999999999999999999864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.97  E-value=2.1e-29  Score=251.90  Aligned_cols=214  Identities=15%  Similarity=0.093  Sum_probs=174.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|||||| ||||++|+++|+++|++|++++|+..+...+..                   .+++++.+|+.|.+    
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~----   60 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------------SGAEPLLWPGEEPS----   60 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------------TTEEEEESSSSCCC----
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------------CCCeEEEecccccc----
Confidence            478999998 999999999999999999999999987665432                   57999999999944    


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh--cCCCEEEEEcCCCccCCC-----CccccccchhHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI--AKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL  232 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~--~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~  232 (530)
                       ++++|+||||||.....           ...+.+++++|++  .+++||||+||.+++...     .++....+...|+
T Consensus        61 -~~~~d~vi~~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           61 -LDGVTHLLISTAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             -CTTCCEEEECCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             -cCCCCEEEECCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence             78999999999865322           1236889999998  788999999998774332     2233456677899


Q ss_pred             HHHHHHHHHHHHC-CCCEEEEEcCcccCCCcccccc----cceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEE
Q 009648          233 LWKRKAEEALIAS-GLPYTIVRPGGMERPTDAYKET----HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (530)
Q Consensus       233 ~sK~~~E~~l~~~-gl~~tIvRPg~V~Gp~~~~~~~----~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vy  307 (530)
                      .+|+++|+++++. |+++++|||+++||++......    ....+..+ ....++||++|+|++++.+++++.  .+++|
T Consensus       129 ~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~  205 (286)
T 3ius_A          129 RWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD--PGAVY  205 (286)
T ss_dssp             HHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC--TTCEE
T ss_pred             HHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC--CCCEE
Confidence            9999999999997 9999999999999997643211    11222222 234578999999999999999986  58899


Q ss_pred             EEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          308 EVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       308 nv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      |+++++..++.++.+++.+++|...
T Consensus       206 ~i~~~~~~s~~e~~~~i~~~~g~~~  230 (286)
T 3ius_A          206 NVCDDEPVPPQDVIAYAAELQGLPL  230 (286)
T ss_dssp             EECCSCCBCHHHHHHHHHHHHTCCC
T ss_pred             EEeCCCCccHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.97  E-value=8.9e-30  Score=266.32  Aligned_cols=244  Identities=16%  Similarity=0.049  Sum_probs=181.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH-hCCCeEEEEECCchh---------HHHHHHHHHHhhhhccccccCCCCCCC---eEE
Q 009648           80 DNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR---------AENLVQSVKQMKLDGELANKGIQPVEM---LEL  146 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll-~~G~~V~~~~R~~~k---------~~~l~~~~~~~~l~~~~~~~g~~~~~~---v~~  146 (530)
                      +|+||||||+||||++|+++|+ ++|++|++++|+...         ...+.+.++.+        .+.....+   +++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~   73 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQS--------DGPKPPWADRYAAL   73 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHS--------CSSCCTTTTCCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHh--------hccccccCCceEEE
Confidence            3689999999999999999999 999999999997654         33333222222        01000124   899


Q ss_pred             EEecCCCHhhHHHHhC--C-CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-
Q 009648          147 VECDLEKRVQIEPALG--N-ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-  220 (530)
Q Consensus       147 v~~Dl~d~~sl~~a~~--~-vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-  220 (530)
                      +.+|+.|.+++.++++  + +|+||||||....  ...++...+++|+.++.+|+++|++.++++|||+||.+++.... 
T Consensus        74 ~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~  153 (397)
T 1gy8_A           74 EVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM  153 (397)
T ss_dssp             EESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC
T ss_pred             EECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCc
Confidence            9999999999999987  6 9999999996542  22345667999999999999999999999999999987642211 


Q ss_pred             -----------ccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccc-----------cc--------
Q 009648          221 -----------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY-----------KE--------  266 (530)
Q Consensus       221 -----------~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~-----------~~--------  266 (530)
                                 ++.+..+...|+.+|+++|++++.    .|+++++|||++|||++...           ..        
T Consensus       154 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~  233 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM  233 (397)
T ss_dssp             -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred             ccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHH
Confidence                       122334567899999999999875    59999999999999996310           00        


Q ss_pred             -----cc------------ceeecc------cCcccCCCCCHHHHHHHHHHHHhCCCCCC----C---cEEEEeCCCCCC
Q 009648          267 -----TH------------NITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLSY----C---KVVEVIAETTAP  316 (530)
Q Consensus       267 -----~~------------~~~~~~------~~~~~~g~V~v~DVA~ai~~ll~~~~~~~----g---~vynv~~~~~~t  316 (530)
                           ..            .+.+..      .+....++||++|+|++++.++++.....    +   ++|||+++...+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s  313 (397)
T 1gy8_A          234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS  313 (397)
T ss_dssp             HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred             HHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCccc
Confidence                 00            011111      11222367999999999999997643111    3   899999998899


Q ss_pred             hhHHHHHHHhcCCCC
Q 009648          317 LTPMEELLAKIPSQR  331 (530)
Q Consensus       317 ~~~i~ell~~v~g~~  331 (530)
                      +.++.+++.+++|..
T Consensus       314 ~~e~~~~i~~~~g~~  328 (397)
T 1gy8_A          314 VREVIEVARKTTGHP  328 (397)
T ss_dssp             HHHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999999864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.97  E-value=1.4e-29  Score=265.24  Aligned_cols=239  Identities=14%  Similarity=0.062  Sum_probs=174.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHH-------------HHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN-------------LVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~-------------l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ..+++||||||+||||++|+++|+++|++|++++|.......             +.+.+.... .        ....++
T Consensus         9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--------~~~~~v   79 (404)
T 1i24_A            9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK-A--------LTGKSI   79 (404)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHH-H--------HHCCCC
T ss_pred             cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHh-h--------ccCCce
Confidence            467899999999999999999999999999999987543211             001111100 0        002578


Q ss_pred             EEEEecCCCHhhHHHHhCC--CcEEEEcccCCCCcc--CCC---CcchHhHHHHHHHHHHHHHhcCC-CEEEEEcCCCcc
Q 009648          145 ELVECDLEKRVQIEPALGN--ASVVICCIGASEKEV--FDI---TGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTN  216 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~~~--vD~VI~~Ag~~~~~~--~~~---~~~~~vNv~gt~~Ll~aa~~~gv-~r~V~iSS~~v~  216 (530)
                      +++.+|+.|.+++.+++++  +|+||||||......  .+.   ...+++|+.++.+|+++|++.++ ++||++||.+++
T Consensus        80 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vy  159 (404)
T 1i24_A           80 ELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEY  159 (404)
T ss_dssp             EEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGG
T ss_pred             EEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHh
Confidence            9999999999999999987  999999999653211  121   23678999999999999999887 599999998764


Q ss_pred             CCCC----cc--------------ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc---------
Q 009648          217 KFGF----PA--------------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------  265 (530)
Q Consensus       217 ~~~~----~~--------------~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~---------  265 (530)
                      ....    ++              ....+...|+.+|+++|++++.    .|+++++|||++||||+....         
T Consensus       160 g~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~  239 (404)
T 1i24_A          160 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNR  239 (404)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             CCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccc
Confidence            3211    10              1334567899999999998764    499999999999999975310         


Q ss_pred             -------------------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCC--cEEEEeCCCCCChhHHHHHH
Q 009648          266 -------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC--KVVEVIAETTAPLTPMEELL  324 (530)
Q Consensus       266 -------------------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g--~vynv~~~~~~t~~~i~ell  324 (530)
                                         ....+.+...+....++||++|||++++.+++++. ..+  ++||+++ ...++.++.+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~-~~~s~~e~~~~i  317 (404)
T 1i24_A          240 LDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT-EQFSVNELASLV  317 (404)
T ss_dssp             CCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS-EEEEHHHHHHHH
T ss_pred             cccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC-CCCcHHHHHHHH
Confidence                               00011121222233467999999999999998865 235  7999998 778999999999


Q ss_pred             Hhc
Q 009648          325 AKI  327 (530)
Q Consensus       325 ~~v  327 (530)
                      .++
T Consensus       318 ~~~  320 (404)
T 1i24_A          318 TKA  320 (404)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            998

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.6e-30  Score=261.38  Aligned_cols=225  Identities=14%  Similarity=0.076  Sum_probs=174.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+||||++|+++|+++|+      +...                        ....++++.+|+.|.+.+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------------------~~~~~~~~~~D~~d~~~~   53 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------------------DWVFVSSKDADLTDTAQT   53 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------------------EEEECCTTTCCTTSHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------------------cccccCceecccCCHHHH
Confidence            4578999999999999999999999998      1110                        012344557999999999


Q ss_pred             HHHhCC--CcEEEEcccCCC---CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccc----
Q 009648          158 EPALGN--ASVVICCIGASE---KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA----  223 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~---~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~----  223 (530)
                      .+++++  +|+||||||...   ....++...+++|+.++.+|+++|++.+++||||+||.+++....     ++.    
T Consensus        54 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  133 (319)
T 4b8w_A           54 RALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG  133 (319)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS
T ss_pred             HHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC
Confidence            999986  999999999753   233455667999999999999999999999999999987743211     111    


Q ss_pred             cccchh-HHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-------------------cccceeecccCccc
Q 009648          224 ILNLFW-GVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLF  279 (530)
Q Consensus       224 ~~~~~~-~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-------------------~~~~~~~~~~~~~~  279 (530)
                      ...+.. +|+.+|+++|++++.    .|+++++|||++||||+....                   ....+.+...+...
T Consensus       134 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (319)
T 4b8w_A          134 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR  213 (319)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence            222333 699999999998864    799999999999999986421                   01112222233334


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .++||++|+|++++.+++++....+++||++++...++.++.+++.+++|...
T Consensus       214 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  266 (319)
T 4b8w_A          214 RQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHG  266 (319)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCS
T ss_pred             EEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            46799999999999999985534678999999999999999999999998754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.97  E-value=4.9e-30  Score=267.68  Aligned_cols=235  Identities=14%  Similarity=0.091  Sum_probs=181.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+|+||||||+||||++|+++|+++| ++|++++|+.......        +         ....+++++.+|+.|.++
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------l---------~~~~~v~~~~~Dl~d~~~   92 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN--------V---------PDHPAVRFSETSITDDAL   92 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG--------S---------CCCTTEEEECSCTTCHHH
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh--------c---------cCCCceEEEECCCCCHHH
Confidence            456799999999999999999999999 9999999986532110        0         012579999999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCC-----C--ccc---
Q 009648          157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-----F--PAA---  223 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~-----~--~~~---  223 (530)
                      +.++++++|+||||||.....  ..++...+++|+.++.+|+++|++. ++++|||+||.+++...     .  ++.   
T Consensus        93 l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~  172 (377)
T 2q1s_A           93 LASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV  172 (377)
T ss_dssp             HHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCC
T ss_pred             HHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc
Confidence            999999999999999965321  2345667899999999999999998 99999999998763321     1  222   


Q ss_pred             cc-cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCc---------ccc----c-----------ccceeecc
Q 009648          224 IL-NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTD---------AYK----E-----------THNITLSQ  274 (530)
Q Consensus       224 ~~-~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~---------~~~----~-----------~~~~~~~~  274 (530)
                      +. .+...|+.+|+++|++++.    .|+++++|||++|||++.         ...    .           ...+.+..
T Consensus       173 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g  252 (377)
T 2q1s_A          173 SLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLEN  252 (377)
T ss_dssp             CSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSG
T ss_pred             cccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeC
Confidence            23 5667899999999999874    599999999999999976         210    0           00111111


Q ss_pred             cCcccCCCCCHHHHHHH-HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          275 EDTLFGGQVSNLQVAEL-LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~a-i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .+....++|+++|+|++ ++.+++++.  .+ +|||++++..++.++.+++.+++|...
T Consensus       253 ~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~  308 (377)
T 2q1s_A          253 GGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNT  308 (377)
T ss_dssp             GGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCS
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCC
Confidence            22233468999999999 999999865  45 999999998999999999999998754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.97  E-value=7.5e-30  Score=261.34  Aligned_cols=233  Identities=15%  Similarity=0.139  Sum_probs=182.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+|+||||||+||||++|+++|+++|++|++++|+......+.                 ....+++++.+|+.|.+
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------------~~l~~v~~~~~Dl~d~~   78 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-----------------PPVAGLSVIEGSVTDAG   78 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-----------------CSCTTEEEEECCTTCHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-----------------hccCCceEEEeeCCCHH
Confidence            4566789999999999999999999999999999999764322110                 01157899999999999


Q ss_pred             hHHHHhC--CCcEEEEcccCCCCc-cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC----ccccc-cc
Q 009648          156 QIEPALG--NASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAAIL-NL  227 (530)
Q Consensus       156 sl~~a~~--~vD~VI~~Ag~~~~~-~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~----~~~~~-~~  227 (530)
                      ++.++++  ++|+||||||..... ..++.  +++|+.++.+|+++|.+.++++|||+||.+++....    +.... .+
T Consensus        79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~  156 (330)
T 2pzm_A           79 LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAP  156 (330)
T ss_dssp             HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCC
T ss_pred             HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCC
Confidence            9999998  999999999965432 12222  899999999999999999999999999987733211    00000 25


Q ss_pred             hhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccc----e----eecccCcccCCCCCHHHHHH-HHHHHHhC
Q 009648          228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHN----I----TLSQEDTLFGGQVSNLQVAE-LLACMAKN  298 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~----~----~~~~~~~~~~g~V~v~DVA~-ai~~ll~~  298 (530)
                      ...|+.+|+++|++++..++++++|||+++|||+........    +    .+..... ...+++++|+|+ +++.++++
T Consensus       157 ~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~  235 (330)
T 2pzm_A          157 FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEG  235 (330)
T ss_dssp             CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTT
T ss_pred             CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhc
Confidence            678999999999999988999999999999999852110000    0    1111122 456799999999 99999987


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +.   +++||+.++...++.++.+++.+++|..
T Consensus       236 ~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          236 RP---TGVFNVSTGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             CC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             CC---CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            53   8999999999899999999999999876

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.97  E-value=3e-30  Score=261.34  Aligned_cols=229  Identities=17%  Similarity=0.094  Sum_probs=178.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|........                   ...+++++.+|+.|.+++.++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dl~~~~~~~~~   61 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN-------------------VPKGVPFFRVDLRDKEGVERA   61 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG-------------------SCTTCCEECCCTTCHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh-------------------cccCeEEEECCCCCHHHHHHH
Confidence            4799999999999999999999999999999854321100                   014678899999999999999


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC-CccCC------CCccccccchh
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL-GTNKF------GFPAAILNLFW  229 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~-~v~~~------~~~~~~~~~~~  229 (530)
                      ++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++++||++||. +++..      ..++.+..+..
T Consensus        62 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           62 FREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             HHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            97  89999999986432  2234566789999999999999999999999999998 44221      11222345667


Q ss_pred             HHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------ccceeec-----ccCcccCCCCCHH
Q 009648          230 GVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------THNITLS-----QEDTLFGGQVSNL  286 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~~~~~~-----~~~~~~~g~V~v~  286 (530)
                      .|+.+|+++|++++.    .|+++++|||++||||+.....              ...+.+.     ..+....+++|++
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  221 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG  221 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence            899999999998863    6999999999999999753211              0111111     2222334679999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      |+|++++.+++++    +++||++++...++.++.+++.+++|...
T Consensus       222 Dva~a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  263 (311)
T 2p5y_A          222 DVAEAHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAP  263 (311)
T ss_dssp             HHHHHHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence            9999999999874    78999999999999999999999998653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.97  E-value=2.6e-30  Score=266.81  Aligned_cols=240  Identities=14%  Similarity=0.093  Sum_probs=183.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+||||++|+++|+++|++|++++|+..+...+...+.              ...+++++.+|+.|.+++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~   72 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------------VADGMQSEIGDIRDQNKL   72 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------------TTTTSEEEECCTTCHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--------------cCCceEEEEccccCHHHH
Confidence            346799999999999999999999999999999998765443322110              125789999999999999


Q ss_pred             HHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC------Ccccccc
Q 009648          158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG------FPAAILN  226 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~------~~~~~~~  226 (530)
                      .+++++  +|+||||||....  ...++...+++|+.++.+|+++|.+.+ +++|||+||.+++...      .++....
T Consensus        73 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           73 LESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             HHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            999986  8999999985321  223455678999999999999999886 8999999998764321      1122345


Q ss_pred             chhHHHHHHHHHHHHHHHC-------------CCCEEEEEcCcccCCCcccc------------cccceeecccCcccCC
Q 009648          227 LFWGVLLWKRKAEEALIAS-------------GLPYTIVRPGGMERPTDAYK------------ETHNITLSQEDTLFGG  281 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~~-------------gl~~tIvRPg~V~Gp~~~~~------------~~~~~~~~~~~~~~~g  281 (530)
                      +...|+.+|+++|++++..             |+++++|||++|||+++...            ....+.+. ++....+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~  231 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRP  231 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEEC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeec
Confidence            6778999999999998742             99999999999999975310            01111222 1223346


Q ss_pred             CCCHHHHHHHHHHHHhC---CCCCCCcEEEEeCC--CCCChhHHHHHHHhcCCCCC
Q 009648          282 QVSNLQVAELLACMAKN---RSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~---~~~~~g~vynv~~~--~~~t~~~i~ell~~v~g~~~  332 (530)
                      +||++|+|++++.++++   .....+++||++++  ...++.++.+++.+++|...
T Consensus       232 ~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~  287 (357)
T 1rkx_A          232 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA  287 (357)
T ss_dssp             CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred             cEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence            89999999999999874   21135789999974  56899999999999998643

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.97  E-value=6.9e-30  Score=261.31  Aligned_cols=233  Identities=15%  Similarity=0.144  Sum_probs=179.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~sl~  158 (530)
                      |+||||||+||||++|+++|+++ |++|++++|+..+...+.                  ...+++++.+|+.|. +.+.
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~~~~   62 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------------NHPHFHFVEGDISIHSEWIE   62 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------------TCTTEEEEECCTTTCSHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------------------cCCCeEEEeccccCcHHHHH
Confidence            58999999999999999999998 899999999876543221                  125799999999984 5688


Q ss_pred             HHhCCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----cccc-------
Q 009648          159 PALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI-------  224 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~~-------  224 (530)
                      ++++++|+||||||.....  ..+....+++|+.++.+|+++|++.+ ++|||+||.+++....     ++..       
T Consensus        63 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~  141 (345)
T 2bll_A           63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (345)
T ss_dssp             HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             hhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcc
Confidence            8999999999999865321  22445678999999999999999988 8999999987643211     1111       


Q ss_pred             ccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-------------------cccceeecccCcccCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFGG  281 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-------------------~~~~~~~~~~~~~~~g  281 (530)
                      ..+.+.|+.+|+++|++++.    .|+++++|||++|||++....                   ....+.+...+....+
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  221 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence            13455899999999999863    699999999999999975311                   0011111122223335


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC-CCChhHHHHHHHhcCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~-~~t~~~i~ell~~v~g~~~  332 (530)
                      ++|++|+|++++.+++++. ...+++||++++. ..++.++.+++.+++|...
T Consensus       222 ~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~  274 (345)
T 2bll_A          222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  274 (345)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCT
T ss_pred             EEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCc
Confidence            8999999999999998763 1358899999986 7899999999999998754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-29  Score=259.11  Aligned_cols=236  Identities=14%  Similarity=-0.021  Sum_probs=181.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH--HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+|+||||||+||||++|+++|+++|++|++++|+..+.  ..+.    .+           ....+++++.+|+.|.+
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~d~~   76 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR----EL-----------GIEGDIQYEDGDMADAC   76 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH----HT-----------TCGGGEEEEECCTTCHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh----hc-----------cccCceEEEECCCCCHH
Confidence            3467999999999999999999999999999999987542  1111    10           01257899999999999


Q ss_pred             hHHHHhCC--CcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCC-CEEEEEcCCCccCCC-----Cccccc
Q 009648          156 QIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAIL  225 (530)
Q Consensus       156 sl~~a~~~--vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~r~V~iSS~~v~~~~-----~~~~~~  225 (530)
                      ++.+++++  +|+||||||.....  ..++...+++|+.++.+|+++|++.++ ++|||+||.+++...     .++.+.
T Consensus        77 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  156 (335)
T 1rpn_A           77 SVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF  156 (335)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             HHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence            99999975  69999999965422  344567789999999999999999986 899999998764321     223344


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cc-ceeecccCcccCCCCCHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~-~~~~~~~~~~~~g~V~v~  286 (530)
                      .+...|+.+|+++|.+++.    .+++++++|++.+|||+.....              .. .......+....++||++
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~  236 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  236 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence            5677899999999999875    4999999999999999643211              00 011111122233579999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |+|++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       237 Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  278 (335)
T 1rpn_A          237 DYVEAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLD  278 (335)
T ss_dssp             HHHHHHHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHhcCC---CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            99999999999875   5899999999899999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.97  E-value=1e-29  Score=260.99  Aligned_cols=240  Identities=15%  Similarity=0.115  Sum_probs=179.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh------HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR------AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+...      .....+.+...  .          ..+++++.+|+.|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~----------~~~~~~~~~D~~~   69 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--T----------GRSVEFEEMDILD   69 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--H----------TCCCEEEECCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--c----------CCceEEEECCCCC
Confidence            5789999999999999999999999999999986432      11111222211  0          1478999999999


Q ss_pred             HhhHHHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccccc
Q 009648          154 RVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI  224 (530)
Q Consensus       154 ~~sl~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~  224 (530)
                      .+++.++++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++++|||+||.+++...     .++..
T Consensus        70 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~  149 (348)
T 1ek6_A           70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP  149 (348)
T ss_dssp             HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence            999999998  89999999996532  2234566789999999999999999999999999998764321     12223


Q ss_pred             ccc-hhHHHHHHHHHHHHHHH---CC--CCEEEEEcCcccCCCcc--cc--------------------cccceeecc--
Q 009648          225 LNL-FWGVLLWKRKAEEALIA---SG--LPYTIVRPGGMERPTDA--YK--------------------ETHNITLSQ--  274 (530)
Q Consensus       225 ~~~-~~~Y~~sK~~~E~~l~~---~g--l~~tIvRPg~V~Gp~~~--~~--------------------~~~~~~~~~--  274 (530)
                      ..+ ...|+.+|+++|++++.   .+  +++++|||+++||++..  +.                    ....+.+..  
T Consensus       150 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  229 (348)
T 1ek6_A          150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (348)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCc
Confidence            344 67899999999999874   24  99999999999998421  00                    000111111  


Q ss_pred             ----cCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          275 ----EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       275 ----~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                          .+....++||++|+|++++.+++++. ...+++||++++...++.++.+++.+++|..
T Consensus       230 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~  291 (348)
T 1ek6_A          230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK  291 (348)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSC
T ss_pred             ccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence                11223367999999999999998752 1224899999999899999999999999864

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.97  E-value=2.1e-30  Score=261.76  Aligned_cols=228  Identities=12%  Similarity=0.011  Sum_probs=177.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|+||||||+||||++|+++|+++  |++|++++|+..+.. +.                    .+++++.+|+.|.+++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------------------~~~~~~~~D~~d~~~~   60 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--------------------NSGPFEVVNALDFNQI   60 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--------------------HSSCEEECCTTCHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--------------------CCCceEEecCCCHHHH
Confidence            468999999999999999999999  899999999876532 11                    2467899999999999


Q ss_pred             HHHhC--CCcEEEEcccCCCC-ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC------ccccccch
Q 009648          158 EPALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLF  228 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~-~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~------~~~~~~~~  228 (530)
                      .++++  ++|+||||||.... ...+....+++|+.++.+|+++|++.++++|||+||.+++....      ++.+..+.
T Consensus        61 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           61 EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             HHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             HHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            99998  89999999986432 12345667899999999999999999999999999987743211      22334567


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHH
Q 009648          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..|+.+|+++|++++.    .|+++++|||++|||+......               ...+.....+....+++|++|+|
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  220 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI  220 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHH
Confidence            7899999999998864    5999999999999996431110               11111111222334679999999


Q ss_pred             HHHHHHHhCCCCC--CCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          290 ELLACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       290 ~ai~~ll~~~~~~--~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ++++.+++++...  .+++||+++ ...++.++.+++.++++
T Consensus       221 ~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          221 DATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT
T ss_pred             HHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCC
Confidence            9999999987521  248999997 67899999999999887

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=2.8e-29  Score=241.86  Aligned_cols=203  Identities=13%  Similarity=0.036  Sum_probs=158.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||||||||++|+++|+++|++|++++|+..+...+.                   ..+++++.+|+.|.++  ++
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------------------~~~~~~~~~D~~d~~~--~~   59 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------------------GATVATLVKEPLVLTE--AD   59 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------------------CTTSEEEECCGGGCCH--HH
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------------------CCCceEEecccccccH--hh
Confidence            57999999999999999999999999999999987665431                   1578999999999887  88


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc--------cccccchhHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP--------AAILNLFWGVL  232 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~--------~~~~~~~~~Y~  232 (530)
                      ++++|+||||||....     ...+++|+.++++|+++|++.+ +|||++||.++......        .....+...|+
T Consensus        60 ~~~~d~vi~~ag~~~~-----~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~  133 (224)
T 3h2s_A           60 LDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYD  133 (224)
T ss_dssp             HTTCSEEEECCCCCTT-----SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHH
T ss_pred             cccCCEEEECCccCCC-----cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhH
Confidence            9999999999997511     1236889999999999999999 89999999765332211        11223366799


Q ss_pred             HHHHHHHHH--H-HHCCCCEEEEEcCcccCCCcccccccceeeccc----CcccCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 009648          233 LWKRKAEEA--L-IASGLPYTIVRPGGMERPTDAYKETHNITLSQE----DTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (530)
Q Consensus       233 ~sK~~~E~~--l-~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~----~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~  305 (530)
                      .+|+.+|.+  + +..|++|++||||++||++....    +.....    ......+++++|||++++.+++++. ..++
T Consensus       134 ~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~  208 (224)
T 3h2s_A          134 GALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATS----YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT-AIRD  208 (224)
T ss_dssp             HHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCC----EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-CTTS
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEcCccccCCCcccC----ceecccccccCCCCCceEeHHHHHHHHHHHhcCcc-ccCC
Confidence            999999965  2 24799999999999999854321    111111    1122367999999999999999987 5799


Q ss_pred             EEEEeCCCCC
Q 009648          306 VVEVIAETTA  315 (530)
Q Consensus       306 vynv~~~~~~  315 (530)
                      +|++++.+..
T Consensus       209 ~~~~~~~~~~  218 (224)
T 3h2s_A          209 RIVVRDADLE  218 (224)
T ss_dssp             EEEEEECC--
T ss_pred             EEEEecCcch
Confidence            9999997653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=3.9e-29  Score=255.07  Aligned_cols=239  Identities=18%  Similarity=0.097  Sum_probs=180.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~s  156 (530)
                      .++|+||||||+||||++|+++|+++|++|++++|+..+...+.+.+...            ...+++++ .+|+.|.++
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~d~~~   76 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK------------YPGRFETAVVEDMLKQGA   76 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------STTTEEEEECSCTTSTTT
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc------------CCCceEEEEecCCcChHH
Confidence            45789999999999999999999999999999999987766554433221            01478888 799999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh-cCCCEEEEEcCCCccCCCC---------ccc---
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSSLGTNKFGF---------PAA---  223 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~-~gv~r~V~iSS~~v~~~~~---------~~~---  223 (530)
                      +.++++++|+||||||..... .++...+++|+.++.+|+++|.+ .+++||||+||.++...+.         ++.   
T Consensus        77 ~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~  155 (342)
T 1y1p_A           77 YDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL  155 (342)
T ss_dssp             TTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred             HHHHHcCCCEEEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCc
Confidence            999999999999999965432 35566789999999999999985 6789999999987642211         111   


Q ss_pred             -------------cccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccccc-c-------eeec---
Q 009648          224 -------------ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH-N-------ITLS---  273 (530)
Q Consensus       224 -------------~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~-~-------~~~~---  273 (530)
                                   ...+...|+.+|+++|++++.      .++++++|||++|||+........ .       +..+   
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T 1y1p_A          156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS  235 (342)
T ss_dssp             HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC
T ss_pred             hhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCc
Confidence                         123567899999999998864      278999999999999975421100 0       0000   


Q ss_pred             --ccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          274 --QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       274 --~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                        .+......+++++|+|++++.+++++. ..++.| +..+...++.++.+++.++++..
T Consensus       236 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          236 PALALMPPQYYVSAVDIGLLHLGCLVLPQ-IERRRV-YGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHTCCSEEEEEHHHHHHHHHHHHHCTT-CCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred             cccccCCcCCEeEHHHHHHHHHHHHcCcc-cCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence              011123357999999999999998764 235545 44555689999999999999864

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.96  E-value=8.6e-30  Score=254.86  Aligned_cols=212  Identities=11%  Similarity=0.088  Sum_probs=175.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|+++|++|++++|..                                  +|+.|.+.+.++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------------~D~~d~~~~~~~   51 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------------------------------LDITNISQVQQV   51 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------------------------------SCTTCHHHHHHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------------------------------cCCCCHHHHHHH
Confidence            4899999999999999999999999999999932                                  799999999999


Q ss_pred             hC--CCcEEEEcccCCCCcc--CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHH
Q 009648          161 LG--NASVVICCIGASEKEV--FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~~~--~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      ++  ++|+||||||......  .++...+++|+.++.+|+++|++.++ ||||+||.+++...     .++....+...|
T Consensus        52 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  130 (287)
T 3sc6_A           52 VQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIY  130 (287)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred             HHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence            98  7999999999764322  45667899999999999999999998 89999998764321     223445677889


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc---------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~---------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~  302 (530)
                      +.+|+++|++++..+.++++|||++|||++.....         ...+.+.  +....+++|++|+|++++.+++++.  
T Consensus       131 ~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~--  206 (287)
T 3sc6_A          131 GASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVV--ADQIGSPTYVADLNVMINKLIHTSL--  206 (287)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEE--CSCEECCEEHHHHHHHHHHHHTSCC--
T ss_pred             HHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEee--cCcccCceEHHHHHHHHHHHHhCCC--
Confidence            99999999999998889999999999998653211         1112222  1234478999999999999999876  


Q ss_pred             CCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       303 ~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                       +++||++++...++.++.+.+.+++|...
T Consensus       207 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  235 (287)
T 3sc6_A          207 -YGTYHVSNTGSCSWFEFAKKIFSYANMKV  235 (287)
T ss_dssp             -CEEEECCCBSCEEHHHHHHHHHHHHTCCC
T ss_pred             -CCeEEEcCCCcccHHHHHHHHHHHcCCCc
Confidence             78999999999999999999999998754

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.96  E-value=1.1e-29  Score=261.88  Aligned_cols=234  Identities=12%  Similarity=0.055  Sum_probs=181.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+||||||+||||++|++.|+++ |++|++++|+..  ....+.               ......+++++.+|+.|.+++
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~d~~~~   65 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS---------------DISESNRYNFEHADICDSAEI   65 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT---------------TTTTCTTEEEEECCTTCHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh---------------hhhcCCCeEEEECCCCCHHHH
Confidence            47999999999999999999998 799999999752  222110               001135799999999999999


Q ss_pred             HHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhc--CCC-------EEEEEcCCCccCCC-----
Q 009648          158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA--KVN-------HFIMVSSLGTNKFG-----  219 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~-------r~V~iSS~~v~~~~-----  219 (530)
                      .++++  ++|+||||||....  ...++...+++|+.++.+|+++|.+.  +++       +|||+||.+++...     
T Consensus        66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~  145 (361)
T 1kew_A           66 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE  145 (361)
T ss_dssp             HHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred             HHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence            99997  89999999996542  22355678999999999999999998  887       99999998663221     


Q ss_pred             ----------CccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecc
Q 009648          220 ----------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ  274 (530)
Q Consensus       220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~  274 (530)
                                .++.+..+...|+.+|+++|.+++.    .|+++++|||++|||++.....           ...+.+..
T Consensus       146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence                      1122345677899999999999875    4999999999999999753110           01111112


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .+....++++++|+|++++.+++++.  .+++|||+++...++.++.+++.+++|..
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~  280 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEI  280 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred             CCceeEeeEEHHHHHHHHHHHHhCCC--CCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence            22233467999999999999998764  58899999999899999999999998864

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.96  E-value=1.7e-29  Score=256.04  Aligned_cols=223  Identities=14%  Similarity=0.076  Sum_probs=154.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+...                         ++  ++.+|+.|.+++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------------------~~--~~~~Dl~d~~~~~~   54 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------------------PK--FEQVNLLDSNAVHH   54 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------------CHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------------------CC--eEEecCCCHHHHHH
Confidence            5789999999999999999999999999999987532                         12  67799999999998


Q ss_pred             HhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC----CccccccchhHH
Q 009648          160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGV  231 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~----~~~~~~~~~~~Y  231 (530)
                      ++++  +|+||||||....  ...++...+++|+.++.+|+++|.+.++ +|||+||.+++...    .++.+..+...|
T Consensus        55 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y  133 (315)
T 2ydy_A           55 IIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLY  133 (315)
T ss_dssp             HHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred             HHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence            8875  8999999996533  2345677899999999999999999887 99999998774321    122334567789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCccc---cc----------ccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAY---KE----------THNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~---~~----------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      +.+|+++|++++..++++++||+++|||+.+..   ..          ...+.+  .+.....+++++|+|++++.++++
T Consensus       134 ~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          134 GKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHh
Confidence            999999999999989999999999999987641   10          001111  112344689999999999999976


Q ss_pred             C--CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          299 R--SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       299 ~--~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .  ....+++||++++...++.++.+++.+++|...
T Consensus       212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  247 (315)
T 2ydy_A          212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPS  247 (315)
T ss_dssp             HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCC
T ss_pred             hccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCCh
Confidence            4  113589999999999999999999999998754

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=3.6e-29  Score=259.00  Aligned_cols=223  Identities=13%  Similarity=0.129  Sum_probs=176.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhC-CC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKL-GF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++++|+||||||+||||++|+++|+++ |+ +|++++|+..+...+.+.+.               ..+++++.+|++|.
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---------------~~~v~~~~~Dl~d~   82 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---------------DPRMRFFIGDVRDL   82 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---------------CTTEEEEECCTTCH
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---------------CCCEEEEECCCCCH
Confidence            456789999999999999999999999 97 99999999877666543221               25799999999999


Q ss_pred             hhHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHH
Q 009648          155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL  232 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~  232 (530)
                      +++.++++++|+||||||....  ...++...+++|+.++.+++++|.+.++++||++||..+.         .+...|+
T Consensus        83 ~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------~p~~~Y~  153 (344)
T 2gn4_A           83 ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------NPINLYG  153 (344)
T ss_dssp             HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------SCCSHHH
T ss_pred             HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------CCccHHH
Confidence            9999999999999999996532  1123456789999999999999999999999999997652         3356799


Q ss_pred             HHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--------cc-ceeecccCcccCCCCCHHHHHHHHHHHH
Q 009648          233 LWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------TH-NITLSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       233 ~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--------~~-~~~~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                      .+|+++|.+++.       .|+++++||||+|||+++....        .. .+.+. .......+++++|+|++++.++
T Consensus       154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHH
Confidence            999999999875       4799999999999998754311        11 12222 1222234799999999999999


Q ss_pred             hCCCCCCCcEEEEeCCCCCChhHHHHHHHhc
Q 009648          297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKI  327 (530)
Q Consensus       297 ~~~~~~~g~vynv~~~~~~t~~~i~ell~~v  327 (530)
                      ++..  .+++|++.++ ..++.++++.+.+.
T Consensus       233 ~~~~--~g~~~~~~~~-~~s~~el~~~i~~~  260 (344)
T 2gn4_A          233 KRMH--GGEIFVPKIP-SMKMTDLAKALAPN  260 (344)
T ss_dssp             HHCC--SSCEEEECCC-EEEHHHHHHHHCTT
T ss_pred             hhcc--CCCEEecCCC-cEEHHHHHHHHHHh
Confidence            9864  5789998877 46777777777643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.96  E-value=3.7e-29  Score=255.57  Aligned_cols=237  Identities=13%  Similarity=-0.000  Sum_probs=182.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+||||++|+++|+++|++|++++|+..+...  ..+...           ....+++++.+|+.|.+++.
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~-----------~~~~~~~~~~~Dl~d~~~~~   68 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKEL-----------GIENDVKIIHMDLLEFSNII   68 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHT-----------TCTTTEEECCCCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhc-----------cccCceeEEECCCCCHHHHH
Confidence            35789999999999999999999999999999998764321  111111           01247899999999999999


Q ss_pred             HHhCC--CcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCC-CEEEEEcCCCccCCC-----Cccccccch
Q 009648          159 PALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNLF  228 (530)
Q Consensus       159 ~a~~~--vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~r~V~iSS~~v~~~~-----~~~~~~~~~  228 (530)
                      +++++  +|+||||||.....  ..++...+++|+.++.+|+++|.+.++ ++|||+||.+++...     .++....+.
T Consensus        69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~  148 (345)
T 2z1m_A           69 RTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR  148 (345)
T ss_dssp             HHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             HHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC
Confidence            99975  69999999965322  345567789999999999999998887 899999998763221     122344567


Q ss_pred             hHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccc---------------cceeecccCcccCCCCCHHHHH
Q 009648          229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---------------HNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       229 ~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~---------------~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..|+.+|+++|.+++.    .+++++++|+.++|||+......               .............++++++|+|
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva  228 (345)
T 2z1m_A          149 SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV  228 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence            7899999999998864    48999999999999997432110               0000111112233589999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       229 ~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  267 (345)
T 2z1m_A          229 EAMWLMMQQPE---PDDYVIATGETHTVREFVEKAAKIAGFD  267 (345)
T ss_dssp             HHHHHHHTSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHhCCC---CceEEEeCCCCccHHHHHHHHHHHhCCC
Confidence            99999998765   5899999999999999999999999875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.96  E-value=3.1e-29  Score=257.01  Aligned_cols=230  Identities=13%  Similarity=0.095  Sum_probs=177.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+||||++|+++|+++|++|++++|+.......                 .....+++++.+|+.|.+++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------l~~~~~~~~~~~Dl~d~~~~   81 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH-----------------LKDHPNLTFVEGSIADHALV   81 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-----------------SCCCTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-----------------HhhcCCceEEEEeCCCHHHH
Confidence            4568999999999999999999999999999999986432110                 00015789999999999999


Q ss_pred             HHHhCC--CcEEEEcccCCCCc-cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC--Cccccc----cch
Q 009648          158 EPALGN--ASVVICCIGASEKE-VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--FPAAIL----NLF  228 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~~~-~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~--~~~~~~----~~~  228 (530)
                      .+++++  +|+||||||..... ..++.  +++|+.++.+|+++|.+.++++||++||.+++...  ....+.    .+.
T Consensus        82 ~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~  159 (333)
T 2q1w_A           82 NQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPA  159 (333)
T ss_dssp             HHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCT
T ss_pred             HHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCC
Confidence            999987  99999999965432 11222  89999999999999999999999999998774300  110000    445


Q ss_pred             -hHHHHHHHHHHHHHHH-CCCCEEEEEcCcccCCCcc--ccccc--ce----eecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          229 -WGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDA--YKETH--NI----TLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       229 -~~Y~~sK~~~E~~l~~-~gl~~tIvRPg~V~Gp~~~--~~~~~--~~----~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                       ..|+.+|+++|++++. .. ++++|||+++||++..  .....  .+    .+.. ......+++++|+|++++.++++
T Consensus       160 ~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~  237 (333)
T 2q1w_A          160 NSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDG  237 (333)
T ss_dssp             TCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTT
T ss_pred             CCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhc
Confidence             7899999999999998 66 9999999999999831  10000  00    1111 22334679999999999999988


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +.   +++||++++...++.++.+++.+++|..
T Consensus       238 ~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          238 VG---HGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             CC---CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             CC---CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            65   8999999999899999999999999875

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.96  E-value=1.5e-29  Score=261.47  Aligned_cols=230  Identities=13%  Similarity=0.041  Sum_probs=178.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+|+||||||+||||++|+++|+++| ++|++++|+......     ..              ..++. +.+|+.|.+.
T Consensus        44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-----~~--------------~~~~~-~~~d~~~~~~  103 (357)
T 2x6t_A           44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VN--------------LVDLN-IADYMDKEDF  103 (357)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-----GG--------------TTTSC-CSEEEEHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-----hc--------------ccCce-EeeecCcHHH
Confidence            346789999999999999999999999 999999998654210     00              01233 6789999999


Q ss_pred             HHHHhC-----CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccccccc
Q 009648          157 IEPALG-----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILN  226 (530)
Q Consensus       157 l~~a~~-----~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~  226 (530)
                      +..+++     ++|+||||||.......++...+++|+.++.+|+++|++.++ +|||+||.+++...     .++....
T Consensus       104 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             HHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             HHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            999887     599999999976544455667799999999999999999999 99999998763321     2233445


Q ss_pred             chhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc---------------cccceeecccCcc-cCCCCCHH
Q 009648          227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDTL-FGGQVSNL  286 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~---------------~~~~~~~~~~~~~-~~g~V~v~  286 (530)
                      +...|+.+|+++|++++.    .|+++++|||++|||++....               ....+.+...+.. ..++++++
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  262 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  262 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence            677899999999999875    489999999999999975311               0111111222233 45779999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |+|++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       263 Dva~ai~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          263 DVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             HHHHHHHHHHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            99999999999875   8999999999899999999999999876

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-29  Score=254.90  Aligned_cols=226  Identities=13%  Similarity=0.034  Sum_probs=169.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      +||||||+||||++|+++|+++| ++|++++|+......  ..+                 .+++ +.+|+.|.+.+..+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~-----------------~~~~-~~~d~~~~~~~~~~   60 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNL-----------------VDLN-IADYMDKEDFLIQI   60 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHH-----------------HTSC-CSEEEEHHHHHHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhc-----------------Ccce-eccccccHHHHHHH
Confidence            48999999999999999999999 999999998754211  001                 1122 66899999999999


Q ss_pred             hCC-----CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          161 LGN-----ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       161 ~~~-----vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      +++     +|+||||||.......+....+++|+.++.+|+++|++.++ +|||+||.+++...     .++....+...
T Consensus        61 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  139 (310)
T 1eq2_A           61 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNV  139 (310)
T ss_dssp             HTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred             HhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence            975     99999999976544445667799999999999999999999 99999998763321     22334566778


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcc-cCCCCCHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTL-FGGQVSNLQVAE  290 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~-~~g~V~v~DVA~  290 (530)
                      |+.+|+++|++++.    .|+++++|||++|||++.....               ...+.+...+.. ..+++|++|+|+
T Consensus       140 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            99999999999875    4899999999999999764210               011111222233 457899999999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       220 ~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          220 VNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             HHHHHHHHCC---CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             HHHHHHhcCC---CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            9999998875   8899999998899999999999988865

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.96  E-value=6.7e-29  Score=254.25  Aligned_cols=237  Identities=17%  Similarity=0.187  Sum_probs=170.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+||||++|+++|+++|++|++++|+.+....+.. +..+  .+        ...+++++.+|+.|.+++.
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~--~~--------~~~~~~~~~~Dl~d~~~~~   72 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDL--PK--------AETHLTLWKADLADEGSFD   72 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTS--TT--------HHHHEEEEECCTTSTTTTH
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhc--cc--------CCCeEEEEEcCCCCHHHHH
Confidence            46789999999999999999999999999999998764332211 1111  00        0135889999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCC-CcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCC-------Ccccc-----
Q 009648          159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-------FPAAI-----  224 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~-~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~-------~~~~~-----  224 (530)
                      ++++++|+|||||+.......+. ...+++|+.++.+|+++|++++ ++||||+||.++....       .++..     
T Consensus        73 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~  152 (337)
T 2c29_D           73 EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEF  152 (337)
T ss_dssp             HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred             HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhh
Confidence            99999999999998653222222 2478999999999999999887 8999999998642211       11110     


Q ss_pred             ---c-cchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccccee-----ecccCcc-----cCCCCCHH
Q 009648          225 ---L-NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNIT-----LSQEDTL-----FGGQVSNL  286 (530)
Q Consensus       225 ---~-~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~~~-----~~~~~~~-----~~g~V~v~  286 (530)
                         . .+.+.|+.+|+.+|++++    ..|+++++|||++||||+........+.     +......     ...++|++
T Consensus       153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~  232 (337)
T 2c29_D          153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD  232 (337)
T ss_dssp             HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH
T ss_pred             hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH
Confidence               0 134579999999998875    3699999999999999975321110000     0001111     12379999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      |+|++++.+++++.  .++.|+++++ ..++.++.+++.+.++
T Consensus       233 Dva~a~~~~~~~~~--~~~~~~~~~~-~~s~~e~~~~i~~~~~  272 (337)
T 2c29_D          233 DLCNAHIYLFENPK--AEGRYICSSH-DCIILDLAKMLREKYP  272 (337)
T ss_dssp             HHHHHHHHHHHCTT--CCEEEEECCE-EEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHhcCcc--cCceEEEeCC-CCCHHHHHHHHHHHCC
Confidence            99999999998764  3567876654 4789999999998774

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.96  E-value=1e-28  Score=233.95  Aligned_cols=202  Identities=16%  Similarity=0.156  Sum_probs=159.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||++|+++|+++|++|++++|+..+...                   ....+++++.+|+.|.+++.++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~D~~~~~~~~~~   64 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------------------EGPRPAHVVVGDVLQAADVDKT   64 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------------------SSCCCSEEEESCTTSHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------------------ccCCceEEEEecCCCHHHHHHH
Confidence            789999999999999999999999999999999764321                   0125789999999999999999


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE  240 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~  240 (530)
                      ++++|+||||||....  .   ...++|+.++.+++++|++.++++||++||.++....  .....+...|+.+|+++|+
T Consensus        65 ~~~~d~vi~~a~~~~~--~---~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~--~~~~~~~~~y~~~K~~~e~  137 (206)
T 1hdo_A           65 VAGQDAVIVLLGTRND--L---SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDP--TKVPPRLQAVTDDHIRMHK  137 (206)
T ss_dssp             HTTCSEEEECCCCTTC--C---SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCT--TCSCGGGHHHHHHHHHHHH
T ss_pred             HcCCCEEEECccCCCC--C---CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCc--ccccccchhHHHHHHHHHH
Confidence            9999999999996543  1   2246899999999999999999999999998764321  1111156789999999999


Q ss_pred             HHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       241 ~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      ++++.++++++||||+++ ++...   ..+.........+.+++++|+|++++++++++. ..+++|+|.++.
T Consensus       138 ~~~~~~i~~~~lrp~~~~-~~~~~---~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~g~  205 (206)
T 1hdo_A          138 VLRESGLKYVAVMPPHIG-DQPLT---GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSHQY  205 (206)
T ss_dssp             HHHHTCSEEEEECCSEEE-CCCCC---SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEECCC
T ss_pred             HHHhCCCCEEEEeCCccc-CCCCC---cceEecccCCCCCCccCHHHHHHHHHHHhcCcc-ccccceeeeccc
Confidence            999999999999999983 22211   111111111111478999999999999999876 568999999874

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.96  E-value=3.9e-29  Score=253.73  Aligned_cols=220  Identities=14%  Similarity=0.079  Sum_probs=174.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+..                                 +|+.|.+++.+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~---------------------------------~D~~d~~~~~~   49 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------------------LNLLDSRAVHD   49 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------------------CCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc---------------------------------CCccCHHHHHH
Confidence            478999999999999999999999999999887531                                 79999999999


Q ss_pred             HhC--CCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccc----cc
Q 009648          160 ALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAA----IL  225 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~----~~  225 (530)
                      +++  ++|+||||||....   ...+....+++|+.++.+|+++|++.++++|||+||.+++...     .++.    ..
T Consensus        50 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  129 (321)
T 1e6u_A           50 FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  129 (321)
T ss_dssp             HHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             HHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence            998  99999999996531   1234556789999999999999999999999999998774321     1111    23


Q ss_pred             cch-hHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc------c--------------cceeecccCcccC
Q 009648          226 NLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE------T--------------HNITLSQEDTLFG  280 (530)
Q Consensus       226 ~~~-~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~------~--------------~~~~~~~~~~~~~  280 (530)
                      .+. ..|+.+|+++|++++.    .|+++++|||++|||++.....      .              ..+.+...+....
T Consensus       130 ~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~  209 (321)
T 1e6u_A          130 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  209 (321)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEE
Confidence            343 5899999999999875    5999999999999999764210      0              1122222233344


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCC-------CCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRSLS-------YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~~~-------~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++||++|+|++++.+++++...       .+++||++++...++.++.+++.+++|...
T Consensus       210 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~  268 (321)
T 1e6u_A          210 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG  268 (321)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred             EeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence            6899999999999999886521       268999999998999999999999998653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.96  E-value=6.3e-29  Score=263.68  Aligned_cols=243  Identities=16%  Similarity=0.144  Sum_probs=176.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ...+|+||||||+||||++|+++|+++|++|++++|+...   ...+.+.+........    ......+++++.+|+.|
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~----~~~~~~~v~~v~~Dl~d  141 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET----VEMMLSNIEVIVGDFEC  141 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHH----HHHHHTTEEEEEECC--
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccc----cccccCceEEEeCCCCC
Confidence            4557899999999999999999999999999999999873   3333333322100000    00012689999999999


Q ss_pred             HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC---------Ccccc
Q 009648          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI  224 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~---------~~~~~  224 (530)
                      .+.+. ++.++|+||||||.... ..++...+++|+.++.+|+++|.+ ++++|||+||.++..+.         .++.+
T Consensus       142 ~~~l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~  218 (427)
T 4f6c_A          142 MDDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADV  218 (427)
T ss_dssp             -CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECTTCS
T ss_pred             cccCC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCcccccccc
Confidence            88887 88899999999997542 345678899999999999999999 78899999998771110         11111


Q ss_pred             ---ccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCcccccccc--------e--------eecc-cCcccCC
Q 009648          225 ---LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN--------I--------TLSQ-EDTLFGG  281 (530)
Q Consensus       225 ---~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~~~~~~~~--------~--------~~~~-~~~~~~g  281 (530)
                         ..+...|+.+|+++|+++++   .|+++++||||+|||+.........        +        .+.. .......
T Consensus       219 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (427)
T 4f6c_A          219 YKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVD  298 (427)
T ss_dssp             CSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEEC
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEE
Confidence               23677899999999999986   7999999999999999754321000        0        0010 0123346


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      +++++|+|++++.++.++.  .+++|||+++..+++.++.+++.+ ++
T Consensus       299 ~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          299 FSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             CEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             EeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            8999999999999998876  699999999999999999999998 44

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=5.2e-29  Score=238.86  Aligned_cols=205  Identities=15%  Similarity=0.130  Sum_probs=148.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|+.++...+.                    .+++++.+|+.|.++  ++
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------------~~~~~~~~D~~d~~~--~~   58 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------------KDINILQKDIFDLTL--SD   58 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------------SSSEEEECCGGGCCH--HH
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------------CCCeEEeccccChhh--hh
Confidence            57999999999999999999999999999999987655431                    578999999999887  88


Q ss_pred             hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC------ccccccchhHHHHH
Q 009648          161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLFWGVLLW  234 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~------~~~~~~~~~~Y~~s  234 (530)
                      ++++|+||||||....       .+++|+.++++++++|++.+++|||++||.++.....      ++....+...|+.+
T Consensus        59 ~~~~d~vi~~ag~~~~-------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~  131 (221)
T 3ew7_A           59 LSDQNVVVDAYGISPD-------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA  131 (221)
T ss_dssp             HTTCSEEEECCCSSTT-------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCH
T ss_pred             hcCCCEEEECCcCCcc-------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHH
Confidence            8999999999997432       2567999999999999999999999999986632211      11122344558889


Q ss_pred             HHHHHHH--HH--HCCCCEEEEEcCcccCCCcccccccceeecccC----cccCCCCCHHHHHHHHHHHHhCCCCCCCcE
Q 009648          235 KRKAEEA--LI--ASGLPYTIVRPGGMERPTDAYKETHNITLSQED----TLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (530)
Q Consensus       235 K~~~E~~--l~--~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~----~~~~g~V~v~DVA~ai~~ll~~~~~~~g~v  306 (530)
                      |...|.+  ++  ..|++|++||||++||++....   .+......    .....+|+++|||++++.+++++. ..+++
T Consensus       132 k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~  207 (221)
T 3ew7_A          132 RAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTG---DYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN-HLNEH  207 (221)
T ss_dssp             HHHHHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS-CTTSE
T ss_pred             HHHHHHHHHHHhhccCccEEEEeCcceecCCCccC---ceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc-ccCCE
Confidence            9988876  66  6899999999999999843211   11111110    011247999999999999999987 57999


Q ss_pred             EEEeCCCCCChh
Q 009648          307 VEVIAETTAPLT  318 (530)
Q Consensus       307 ynv~~~~~~t~~  318 (530)
                      ||++++...+..
T Consensus       208 ~~~~~~~~~~~~  219 (221)
T 3ew7_A          208 FTVAGKLEHHHH  219 (221)
T ss_dssp             EECCC-------
T ss_pred             EEECCCCccccc
Confidence            999998765443

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.96  E-value=3.9e-29  Score=256.90  Aligned_cols=234  Identities=13%  Similarity=0.083  Sum_probs=174.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++.+|+||||||+||||++|+++|+++|++|++++|+........   ..           .....+++++.+|+.|. 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~-----------~~~~~~~~~~~~D~~~~-   87 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV---EH-----------WIGHENFELINHDVVEP-   87 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT---GG-----------GTTCTTEEEEECCTTSC-
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhh---hh-----------hccCCceEEEeCccCCh-
Confidence            3456789999999999999999999999999999999754211100   00           01125799999999875 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Ccc-----c
Q 009648          156 QIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----A  223 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~-----~  223 (530)
                          ++.++|+||||||.....  ..++...+++|+.++.+|+++|++.++ +|||+||.+++...     .++     .
T Consensus        88 ----~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~  162 (343)
T 2b69_A           88 ----LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVN  162 (343)
T ss_dssp             ----CCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred             ----hhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCC
Confidence                367899999999965421  234456789999999999999999887 99999998764321     111     2


Q ss_pred             cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-------------cccceeecccCcccCCCCCHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-------------~~~~~~~~~~~~~~~g~V~v~  286 (530)
                      ...+...|+.+|+++|++++.    .|+++++|||++|||++....             ....+.+...+....++++++
T Consensus       163 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  242 (343)
T 2b69_A          163 PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS  242 (343)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHH
Confidence            344567899999999998763    699999999999999964311             011111122222334679999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      |+|++++.+++++.   +++||++++...++.++.+++.+++|...
T Consensus       243 Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  285 (343)
T 2b69_A          243 DLVNGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGS  285 (343)
T ss_dssp             HHHHHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCC
Confidence            99999999998753   78999999999999999999999998754

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.96  E-value=1.6e-28  Score=253.00  Aligned_cols=225  Identities=15%  Similarity=0.141  Sum_probs=175.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|||||||||||++|++.|+++|++|++++|+........+.+..+            ...+++++.+|+.|.+++.+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l------------~~~~v~~~~~Dl~d~~~l~~   77 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL------------EDKGAIIVYGLINEQEAMEK   77 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH------------HHTTCEEEECCTTCHHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH------------HhCCcEEEEeecCCHHHHHH
Confidence            568999999999999999999999999999999872211111111111            01579999999999999999


Q ss_pred             HhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      +++  ++|+||||+|..             |+.++.+|+++|+++| +++||+ |+.+..  ..+.....+...|+.+|+
T Consensus        78 ~~~~~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~--~~e~~~~~p~~~y~~sK~  141 (346)
T 3i6i_A           78 ILKEHEIDIVVSTVGGE-------------SILDQIALVKAMKAVGTIKRFLP-SEFGHD--VNRADPVEPGLNMYREKR  141 (346)
T ss_dssp             HHHHTTCCEEEECCCGG-------------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSC--TTTCCCCTTHHHHHHHHH
T ss_pred             HHhhCCCCEEEECCchh-------------hHHHHHHHHHHHHHcCCceEEee-cccCCC--CCccCcCCCcchHHHHHH
Confidence            999  999999999862             6788999999999999 999987 665532  122334466788999999


Q ss_pred             HHHHHHHHCCCCEEEEEcCcccCCCcccc--------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEE
Q 009648          237 KAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE  308 (530)
Q Consensus       237 ~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~--------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vyn  308 (530)
                      .+|+++++.|++|++||||+++|......        ....+.+...+.....+++++|+|+++++++.++. ..+++|+
T Consensus       142 ~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~  220 (346)
T 3i6i_A          142 RVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR-TLNKSVH  220 (346)
T ss_dssp             HHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG-GTTEEEE
T ss_pred             HHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc-ccCeEEE
Confidence            99999999999999999999999653221        11122222333334467999999999999999875 4689999


Q ss_pred             EeC-CCCCChhHHHHHHHhcCCCCCC
Q 009648          309 VIA-ETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       309 v~~-~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      +.+ +...++.++.+++.+++|....
T Consensus       221 i~g~~~~~s~~e~~~~~~~~~g~~~~  246 (346)
T 3i6i_A          221 FRPSCNCLNINELASVWEKKIGRTLP  246 (346)
T ss_dssp             CCCGGGEECHHHHHHHHHHHHTSCCC
T ss_pred             EeCCCCCCCHHHHHHHHHHHHCCCCc
Confidence            985 4778999999999999997643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.96  E-value=3.4e-28  Score=262.61  Aligned_cols=246  Identities=17%  Similarity=0.126  Sum_probs=180.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC---CCeEEEEECCchhHHHHHHHHHHhhhhcccc---ccCCCCCCCeEEEEecC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSVQRAENLVQSVKQMKLDGELA---NKGIQPVEMLELVECDL  151 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~---G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~---~~g~~~~~~v~~v~~Dl  151 (530)
                      ..+|+||||||+||||++|+++|+++   |++|++++|+......+.+ +.+..-.+...   ........+++++.+|+
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRR-LEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHH-HHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHH-HHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            46789999999999999999999999   9999999999875543322 21110000000   00000126899999999


Q ss_pred             C------CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----
Q 009648          152 E------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----  220 (530)
Q Consensus       152 ~------d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----  220 (530)
                      .      |.+.+..+++++|+||||||....  .++...+++|+.++.+|+++|++.++++|||+||.+++....     
T Consensus       150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~  227 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFT  227 (478)
T ss_dssp             TSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCC
T ss_pred             CCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcC
Confidence            8      667889999999999999997654  566788999999999999999999999999999987643211     


Q ss_pred             ccccccc-----------hhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc--cccc----ee-----ecc
Q 009648          221 PAAILNL-----------FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--ETHN----IT-----LSQ  274 (530)
Q Consensus       221 ~~~~~~~-----------~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~--~~~~----~~-----~~~  274 (530)
                      ++....+           ...|+.+|+.+|+++++    .|+++++||||+|||+.....  ....    +.     .+.
T Consensus       228 E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~  307 (478)
T 4dqv_A          228 EDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGI  307 (478)
T ss_dssp             SSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCE
T ss_pred             CcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCc
Confidence            1111111           13499999999999885    599999999999999853110  0000    00     000


Q ss_pred             -------c------CcccCCCCCHHHHHHHHHHHHhC----CCCCCCcEEEEeCCCC--CChhHHHHHHHhc
Q 009648          275 -------E------DTLFGGQVSNLQVAELLACMAKN----RSLSYCKVVEVIAETT--APLTPMEELLAKI  327 (530)
Q Consensus       275 -------~------~~~~~g~V~v~DVA~ai~~ll~~----~~~~~g~vynv~~~~~--~t~~~i~ell~~v  327 (530)
                             .      .....++|+++|+|++++.++.+    +. ..+++||++++..  +++.++.+++.++
T Consensus       308 ~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~-~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          308 APRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL-AGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             EESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC-CSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             ccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC-CCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence                   0      02233679999999999999986    33 4689999999987  8999999999995

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.96  E-value=1.1e-28  Score=246.03  Aligned_cols=211  Identities=20%  Similarity=0.206  Sum_probs=169.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +||||||+||||++|+++|+++  |++|++++|+..+...+..                   .+++++.+|+.|.+++.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~~~~~   61 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------------------QGITVRQADYGDEAALTS   61 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------------------TTCEEEECCTTCHHHHHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------------------CCCeEEEcCCCCHHHHHH
Confidence            4899999999999999999999  9999999999876554321                   468899999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE  239 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E  239 (530)
                      +++++|+||||||...          +.|+.++.+++++|++.+++|||++||.++..  .       ...|+.+|+++|
T Consensus        62 ~~~~~d~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--~-------~~~y~~sK~~~e  122 (286)
T 2zcu_A           62 ALQGVEKLLLISSSEV----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--S-------PLGLADEHIETE  122 (286)
T ss_dssp             HTTTCSEEEECC------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--C-------CSTTHHHHHHHH
T ss_pred             HHhCCCEEEEeCCCCc----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--C-------cchhHHHHHHHH
Confidence            9999999999998521          24788999999999999999999999987741  1       136999999999


Q ss_pred             HHHHHCCCCEEEEEcCcccCCCcccc----cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          240 EALIASGLPYTIVRPGGMERPTDAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       240 ~~l~~~gl~~tIvRPg~V~Gp~~~~~----~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +++++.|+++++|||++++++...+.    ....+... ......++++++|+|++++.++.++. ..+++||+.++...
T Consensus       123 ~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          123 KMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA-AGDGKIASATRADYAAAAARVISEAG-HEGKVYELAGDSAW  200 (286)
T ss_dssp             HHHHHHCSEEEEEEECCBHHHHHTTHHHHHHHTEEEES-CTTCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCSSCB
T ss_pred             HHHHHcCCCeEEEeChHHhhhhHHHhHHhhcCCceecc-CCCCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCCCcC
Confidence            99999999999999998876532111    11112222 22334568999999999999999865 46899999999889


Q ss_pred             ChhHHHHHHHhcCCCCC
Q 009648          316 PLTPMEELLAKIPSQRA  332 (530)
Q Consensus       316 t~~~i~ell~~v~g~~~  332 (530)
                      ++.++.+++.+++|...
T Consensus       201 s~~e~~~~i~~~~g~~~  217 (286)
T 2zcu_A          201 TLTQLAAELTKQSGKQV  217 (286)
T ss_dssp             CHHHHHHHHHHHHSSCC
T ss_pred             CHHHHHHHHHHHHCCCC
Confidence            99999999999998753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.96  E-value=4.4e-29  Score=250.32  Aligned_cols=213  Identities=14%  Similarity=0.122  Sum_probs=173.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++|||||||||||++|+++|+++|++|++++|+.                                  +|+.|.+++.+
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------------~Dl~d~~~~~~   57 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------------LDITNVLAVNK   57 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------------CCTTCHHHHHH
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------------------CCCCCHHHHHH
Confidence            57899999999999999999999999999999862                                  79999999999


Q ss_pred             HhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      +++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++ ||||+||.+++...     .++.+..+...
T Consensus        58 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~  136 (292)
T 1vl0_A           58 FFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSA  136 (292)
T ss_dssp             HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             HHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccH
Confidence            998  89999999996542  1234567799999999999999999988 99999998763321     12233456678


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc--------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCC
Q 009648          231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (530)
Q Consensus       231 Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~--------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~  302 (530)
                      |+.+|+++|++++..+.++++|||++|||++..+..        ...+.+.  +.....+++++|+|++++.+++++   
T Consensus       137 Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~---  211 (292)
T 1vl0_A          137 YGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEK---  211 (292)
T ss_dssp             HHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEee--cCeeeCCccHHHHHHHHHHHHhcC---
Confidence            999999999999998889999999999999332211        0111111  123356899999999999999886   


Q ss_pred             CCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       303 ~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .+++||++++...++.++.+++.+++|...
T Consensus       212 ~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  241 (292)
T 1vl0_A          212 NYGTFHCTCKGICSWYDFAVEIFRLTGIDV  241 (292)
T ss_dssp             CCEEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred             CCcEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence            489999999998999999999999998653

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.96  E-value=3.2e-29  Score=253.50  Aligned_cols=225  Identities=16%  Similarity=0.072  Sum_probs=170.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh----HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++|+|||||||||||++|+++|+++|++|++++|+...    ...+.               ......+++++.+|+.  
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~--   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTG---------------KFLEKPVLELEERDLS--   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSS---------------EEECSCGGGCCHHHHT--
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhh---------------hhccCCCeeEEeCccc--
Confidence            46899999999999999999999999999999998751    11100               0001134555555554  


Q ss_pred             hhHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccccc
Q 009648          155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL  227 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~  227 (530)
                              ++|+||||||....  ...+....++ |+.++.+|+++|+++++++|||+||.+++...     .++.+..+
T Consensus        69 --------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p  139 (321)
T 3vps_A           69 --------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSP  139 (321)
T ss_dssp             --------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             --------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCC
Confidence                    89999999996542  2234456677 99999999999999999999999998774322     22344566


Q ss_pred             hhHHHHHHHHHHHHHHH----CCC-CEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHHHHHH
Q 009648          228 FWGVLLWKRKAEEALIA----SGL-PYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~----~gl-~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      ...|+.+|+++|++++.    .|+ ++++|||++|||++....           ....+.+...+....++||++|+|++
T Consensus       140 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  219 (321)
T 3vps_A          140 RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDK  219 (321)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHH
Confidence            78899999999999875    689 999999999999976421           01112222233344578999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ++.+++++.  .+ +|||++++..++.++.+++. ++|....
T Consensus       220 ~~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~  257 (321)
T 3vps_A          220 LVALANRPL--PS-VVNFGSGQSLSVNDVIRILQ-ATSPAAE  257 (321)
T ss_dssp             HHHGGGSCC--CS-EEEESCSCCEEHHHHHHHHH-TTCTTCE
T ss_pred             HHHHHhcCC--CC-eEEecCCCcccHHHHHHHHH-HhCCCCc
Confidence            999999886  25 99999999999999999999 8886643

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.96  E-value=3.3e-29  Score=256.43  Aligned_cols=235  Identities=20%  Similarity=0.201  Sum_probs=167.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|+++|+++||+|++++|+.++...+. .+..+  .         ...+++++.+|+.|.+++.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~--~---------~~~~~~~~~~Dl~d~~~~~~   76 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLEL--Q---------ELGDLKIFRADLTDELSFEA   76 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHH--G---------GGSCEEEEECCTTTSSSSHH
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhc--C---------CCCcEEEEecCCCChHHHHH
Confidence            678999999999999999999999999999999875422111 01111  0         01478999999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCC-CcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccC----CC-----Ccccc----
Q 009648          160 ALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNK----FG-----FPAAI----  224 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~-~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~----~~-----~~~~~----  224 (530)
                      +++++|+|||+||.......+. ...+++|+.++.+|+++|++++ ++||||+||.++..    .+     .++.+    
T Consensus        77 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~  156 (338)
T 2rh8_A           77 PIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE  156 (338)
T ss_dssp             HHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-
T ss_pred             HHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchh
Confidence            9999999999998653322233 3478999999999999999985 89999999975311    11     11110    


Q ss_pred             ----cc-chhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccccee-----ecccCcc------------
Q 009648          225 ----LN-LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNIT-----LSQEDTL------------  278 (530)
Q Consensus       225 ----~~-~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~~~-----~~~~~~~------------  278 (530)
                          .. ..+.|+.+|..+|+++++    .|+++++|||++||||+........+.     +......            
T Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  236 (338)
T 2rh8_A          157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG  236 (338)
T ss_dssp             ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred             hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccC
Confidence                11 112599999999988753    599999999999999975321110000     0000000            


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ..+++|++|||++++.+++++.  .++.|+++++ ..++.++.+++.+.++
T Consensus       237 ~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~-~~s~~e~~~~l~~~~~  284 (338)
T 2rh8_A          237 SVSIAHVEDVCRAHIFVAEKES--ASGRYICCAA-NTSVPELAKFLSKRYP  284 (338)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCTT--CCEEEEECSE-EECHHHHHHHHHHHCT
T ss_pred             cccEEEHHHHHHHHHHHHcCCC--cCCcEEEecC-CCCHHHHHHHHHHhCC
Confidence            0157999999999999998764  3567888765 4799999999998765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.5e-28  Score=255.56  Aligned_cols=236  Identities=15%  Similarity=-0.011  Sum_probs=179.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-----HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      |+||||||+||||++|+++|+++|++|++++|+...     ...+.+....            ....+++++.+|+.|.+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~Dl~d~~   92 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA------------HIEGNMKLHYGDLTDST   92 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcc------------ccCCCceEEEccCCCHH
Confidence            689999999999999999999999999999998643     1111000000            01257899999999999


Q ss_pred             hHHHHhCC--CcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCC---CEEEEEcCCCccCCC-----Cccc
Q 009648          156 QIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPAA  223 (530)
Q Consensus       156 sl~~a~~~--vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv---~r~V~iSS~~v~~~~-----~~~~  223 (530)
                      ++.+++++  +|+||||||.....  ..++...+++|+.++.+|+++|.+.++   ++|||+||.+++...     .++.
T Consensus        93 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A           93 CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccC
Confidence            99999975  69999999965321  234566789999999999999999987   899999998774321     2223


Q ss_pred             cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cc-ceeecccCcccCCCCC
Q 009648          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQVS  284 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~-~~~~~~~~~~~~g~V~  284 (530)
                      ...+...|+.+|+++|.+++.    .+++++++|++.+|||+.....              .. ............++|+
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  252 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  252 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence            345677899999999998874    5999999999999998643110              00 0111112223346899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++|+|++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       253 v~Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  296 (375)
T 1t2a_A          253 AKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKT  296 (375)
T ss_dssp             HHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhcCC---CceEEEeCCCcccHHHHHHHHHHHhCCC
Confidence            9999999999998865   5899999999999999999999999865

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.96  E-value=1.6e-28  Score=251.34  Aligned_cols=239  Identities=15%  Similarity=0.102  Sum_probs=174.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|.........+.+...  .          ..+++++.+|+.|.+++.++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~Dl~~~~~~~~~   68 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--G----------GKHPTFVEGDIRNEALMTEI   68 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--H----------TSCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh--c----------CCcceEEEccCCCHHHHHHH
Confidence            47999999999999999999999999999987532211111111111  0          14688999999999999988


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccccc-hhH
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL-FWG  230 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~-~~~  230 (530)
                      ++  ++|+||||||....  ...++...+++|+.++.+|+++|++.++++||++||.+++...     .++....+ ...
T Consensus        69 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~  148 (338)
T 1udb_A           69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             hhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence            86  59999999986432  1223456789999999999999999999999999998764221     11122222 678


Q ss_pred             HHHHHHHHHHHHHH----C-CCCEEEEEcCcccCCCccc--c--------------------cccceeecc------cCc
Q 009648          231 VLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDAY--K--------------------ETHNITLSQ------EDT  277 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~-gl~~tIvRPg~V~Gp~~~~--~--------------------~~~~~~~~~------~~~  277 (530)
                      |+.+|+++|++++.    . |++++++|++++||+....  .                    ....+.+..      .+.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  228 (338)
T 1udb_A          149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence            99999999998864    3 7999999999999984210  0                    000011111      111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ...++||++|+|++++.++++.. ...+++||++++...++.++.+++.+++|..
T Consensus       229 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~  283 (338)
T 1udb_A          229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP  283 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred             eeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC
Confidence            22357999999999999997631 1234899999998899999999999999864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.96  E-value=1.4e-28  Score=249.47  Aligned_cols=233  Identities=19%  Similarity=0.220  Sum_probs=164.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-Cchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +|+||||||+||||++|+++|+++|++|++++| +...   ...+.    .+  .+        ...+++++.+|+.|.+
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~----~~--~~--------~~~~~~~~~~Dl~d~~   66 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT----NL--PG--------ASEKLHFFNADLSNPD   66 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH----TS--TT--------HHHHEEECCCCTTCGG
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH----hh--hc--------cCCceEEEecCCCCHH
Confidence            468999999999999999999999999999998 6532   12111    00  00        0135788999999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCC-CCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCC-------cccc--
Q 009648          156 QIEPALGNASVVICCIGASEKEVFD-ITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-------PAAI--  224 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~-~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~-------~~~~--  224 (530)
                      ++.++++++|+|||||+.......+ ....+++|+.++.+|+++|+++ +++||||+||.++.....       ++.+  
T Consensus        67 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~  146 (322)
T 2p4h_X           67 SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSD  146 (322)
T ss_dssp             GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCC
T ss_pred             HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccc
Confidence            9999999999999999754222222 2347899999999999999988 789999999986422111       1100  


Q ss_pred             ------ccch-hHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccce------eecccCcc---cCCCCC
Q 009648          225 ------LNLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNI------TLSQEDTL---FGGQVS  284 (530)
Q Consensus       225 ------~~~~-~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~~------~~~~~~~~---~~g~V~  284 (530)
                            ..+. +.|+.+|+.+|+++++    .|+++++|||++|||++........+      ..+.....   ..+++|
T Consensus       147 ~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  226 (322)
T 2p4h_X          147 VDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVH  226 (322)
T ss_dssp             HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEE
T ss_pred             hhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEE
Confidence                  0112 2699999999988753    69999999999999997532110000      00000000   014799


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ++|||++++.+++++. . .+.|| +++...++.++.+++.+.++
T Consensus       227 v~Dva~a~~~~~~~~~-~-~g~~~-~~~~~~s~~e~~~~i~~~~~  268 (322)
T 2p4h_X          227 VDDVARAHIYLLENSV-P-GGRYN-CSPFIVPIEEMSQLLSAKYP  268 (322)
T ss_dssp             HHHHHHHHHHHHHSCC-C-CEEEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHHhhCcC-C-CCCEE-EcCCCCCHHHHHHHHHHhCC
Confidence            9999999999998765 2 34588 55666899999999988764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.96  E-value=1.4e-28  Score=246.48  Aligned_cols=214  Identities=17%  Similarity=0.176  Sum_probs=169.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+|||||||||||++|++.|+++ |++|++++|+.++...+                   ...+++++.+|+.|.+++.+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------~~~~v~~~~~D~~d~~~l~~   61 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------WRGKVSVRQLDYFNQESMVE   61 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------GBTTBEEEECCTTCHHHHHH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------hhCCCEEEEcCCCCHHHHHH
Confidence            47999999999999999999998 99999999998764432                   12689999999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE  239 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E  239 (530)
                      +++++|+||||||....        ...|+.++.+++++|+++|++|||++||.+.....       + ..+...+..+|
T Consensus        62 ~~~~~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~-------~-~~~~~~~~~~e  125 (289)
T 3e48_A           62 AFKGMDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN-------P-FHMSPYFGYAS  125 (289)
T ss_dssp             HTTTCSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC-------C-STTHHHHHHHH
T ss_pred             HHhCCCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC-------C-CccchhHHHHH
Confidence            99999999999986432        34589999999999999999999999997642211       1 11334455788


Q ss_pred             HHHHHCCCCEEEEEcCcccCCCccccc----ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          240 EALIASGLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       240 ~~l~~~gl~~tIvRPg~V~Gp~~~~~~----~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +.+++.|++|++||||+++|+...+..    ....... .+.....+++++|||++++.++.++. ..+++||++ +...
T Consensus       126 ~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~-~~~~  202 (289)
T 3e48_A          126 RLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYP-AGDGRINYITRNDIARGVIAIIKNPD-TWGKRYLLS-GYSY  202 (289)
T ss_dssp             HHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCC-CTTCEEEEECHHHHHHHHHHHHHCGG-GTTCEEEEC-CEEE
T ss_pred             HHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecC-CCCceeeeEEHHHHHHHHHHHHcCCC-cCCceEEeC-CCcC
Confidence            888899999999999999997532211    1111111 11222347999999999999999876 348999999 8889


Q ss_pred             ChhHHHHHHHhcCCCCC
Q 009648          316 PLTPMEELLAKIPSQRA  332 (530)
Q Consensus       316 t~~~i~ell~~v~g~~~  332 (530)
                      ++.++.+++.+++|+..
T Consensus       203 s~~e~~~~~~~~~g~~~  219 (289)
T 3e48_A          203 DMKELAAILSEASGTEI  219 (289)
T ss_dssp             EHHHHHHHHHHHHTSCC
T ss_pred             CHHHHHHHHHHHHCCce
Confidence            99999999999999753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.96  E-value=5.1e-29  Score=250.41  Aligned_cols=218  Identities=11%  Similarity=-0.001  Sum_probs=174.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+ +|++|++++|+..                              ++.+|+.|.+++.++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------------~~~~D~~d~~~~~~~   49 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------------EFCGDFSNPKGVAET   49 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------------SSCCCTTCHHHHHHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------------cccccCCCHHHHHHH
Confidence            479999999999999999999 8999999999751                              235899999999999


Q ss_pred             hCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHH
Q 009648          161 LGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      +++  +|+||||||....  ...++...+++|+.++.+|+++|++.++ ||||+||.+++...     .++....+...|
T Consensus        50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            986  9999999996542  2345567789999999999999999887 89999998764321     223345567789


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc---------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCC-C
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-L  301 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~---------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~  301 (530)
                      +.+|+++|++++..+.++++|||+++||++.....         ...+.+. + ....+++|++|+|++++.+++++. .
T Consensus       129 ~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~v~Dva~~~~~~~~~~~~~  206 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI-N-DQYGAPTGAELLADCTAHAIRVALNK  206 (299)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE-C-SCEECCEEHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEee-c-CcccCCeeHHHHHHHHHHHHHHhccc
Confidence            99999999999987789999999999999753110         1111111 1 234568999999999999998762 1


Q ss_pred             C-CCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          302 S-YCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       302 ~-~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      . .+++||+++++..++.++.+++.+++|...
T Consensus       207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~  238 (299)
T 1n2s_A          207 PEVAGLYHLVAGGTTTWHDYAALVFDEARKAG  238 (299)
T ss_dssp             GGGCEEEECCCBSCEEHHHHHHHHHHHHHHHT
T ss_pred             cccCceEEEeCCCCCCHHHHHHHHHHHhCCCc
Confidence            2 489999999988999999999999988653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=2.3e-28  Score=243.60  Aligned_cols=204  Identities=17%  Similarity=0.071  Sum_probs=167.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|++.|+++|++|++++|+..+..                      ..+++++.+|+.|.+++.+
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~~   60 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------------GPNEECVQCDLADANAVNA   60 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------------CTTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------------CCCCEEEEcCCCCHHHHHH
Confidence            578999999999999999999999999999999875321                      2679999999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC------CccccccchhHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVLL  233 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~------~~~~~~~~~~~Y~~  233 (530)
                      +++++|+||||||..  ...++...+++|+.++.+|+++|++++++||||+||..+....      .++....+...|+.
T Consensus        61 ~~~~~D~vi~~Ag~~--~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~  138 (267)
T 3rft_A           61 MVAGCDGIVHLGGIS--VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGV  138 (267)
T ss_dssp             HHTTCSEEEECCSCC--SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred             HHcCCCEEEECCCCc--CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence            999999999999974  3345567899999999999999999999999999998764321      12234556678999


Q ss_pred             HHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          234 WKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       234 sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +|+.+|.+++    +.|+++++|||+.|+|+...            ......+++++|+++++..+++.+. ..+.+|++
T Consensus       139 sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~------------~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~~~~~  205 (267)
T 3rft_A          139 SKCFGENLARMYFDKFGQETALVRIGSCTPEPNN------------YRMLSTWFSHDDFVSLIEAVFRAPV-LGCPVVWG  205 (267)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS------------TTHHHHBCCHHHHHHHHHHHHHCSC-CCSCEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC------------CCceeeEEcHHHHHHHHHHHHhCCC-CCceEEEE
Confidence            9999998886    47999999999999986321            1122356899999999999999887 45678888


Q ss_pred             eCCCCCChhHH
Q 009648          310 IAETTAPLTPM  320 (530)
Q Consensus       310 ~~~~~~t~~~i  320 (530)
                      .++...++.++
T Consensus       206 ~s~~~~~~~~~  216 (267)
T 3rft_A          206 ASANDAGWWDN  216 (267)
T ss_dssp             CCCCTTCCBCC
T ss_pred             eCCCCCCcccC
Confidence            88876655554

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=1.8e-28  Score=247.23  Aligned_cols=225  Identities=20%  Similarity=0.155  Sum_probs=173.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++|+||||||||+||++|+++|+++| ++|++++|+..+...  +.+.               ..+++++.+|+.|.+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~---------------~~~~~~~~~D~~d~~~l   66 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELR---------------LQGAEVVQGDQDDQVIM   66 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHH---------------HTTCEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHH---------------HCCCEEEEecCCCHHHH
Confidence            35789999999999999999999999 999999999865421  1111               14689999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      .++++++|+||||+|.....      ..+.|+.++.+++++|++.|++|||++|+.++.....    ..+...|+.+|+.
T Consensus        67 ~~~~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~----~~~~~~y~~sK~~  136 (299)
T 2wm3_A           67 ELALNGAYATFIVTNYWESC------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA----GRLAAAHFDGKGE  136 (299)
T ss_dssp             HHHHTTCSEEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT----TSCCCHHHHHHHH
T ss_pred             HHHHhcCCEEEEeCCCCccc------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC----CcccCchhhHHHH
Confidence            99999999999999853211      2467889999999999999999999988766532111    1123569999999


Q ss_pred             HHHHHHHCCCCEEEEEcCcccCCCccccc-----cc---ceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          238 AEEALIASGLPYTIVRPGGMERPTDAYKE-----TH---NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~-----~~---~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +|+++++.|++|++||||++||+......     ..   .+.+.. +.....+|+++|+|++++.++.++....+++|++
T Consensus       137 ~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~  215 (299)
T 2wm3_A          137 VEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT-GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL  215 (299)
T ss_dssp             HHHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCC-TTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEEC
T ss_pred             HHHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecC-CCCccceecHHHHHHHHHHHHcChhhhCCeEEEe
Confidence            99999999999999999999997432110     11   011111 1222357999999999999998752125789999


Q ss_pred             eCCCCCChhHHHHHHHhcCCCCC
Q 009648          310 IAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       310 ~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .++ ..++.++.+++.+++|+..
T Consensus       216 ~g~-~~s~~e~~~~~~~~~g~~~  237 (299)
T 2wm3_A          216 STC-RHTAEEYAALLTKHTRKVV  237 (299)
T ss_dssp             CSE-EECHHHHHHHHHHHHSSCE
T ss_pred             eec-cCCHHHHHHHHHHHHCCCc
Confidence            874 6899999999999998754

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.96  E-value=5.5e-28  Score=250.29  Aligned_cols=239  Identities=14%  Similarity=0.008  Sum_probs=176.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH--HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+..+.  ..+.. +...         ......+++++.+|+.|.+++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~---------~~~~~~~~~~~~~Dl~d~~~~   70 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDH-IYQD---------PHTCNPKFHLHYGDLSDTSNL   70 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------------CCEEECCCCSSCHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHH-Hhhc---------cccCCCceEEEECCCCCHHHH
Confidence            46899999999999999999999999999999986542  11110 0000         000125789999999999999


Q ss_pred             HHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCC---CEEEEEcCCCccCCC-----Cccccc
Q 009648          158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPAAIL  225 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv---~r~V~iSS~~v~~~~-----~~~~~~  225 (530)
                      .+++++  +|+||||||....  ...++...+++|+.++.+|+++|.+.++   ++||++||.+++...     .++...
T Consensus        71 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           71 TRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             HHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             HHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence            999975  7999999996432  2234456689999999999999999988   899999998764321     223334


Q ss_pred             cchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cc-ceeecccCcccCCCCCHH
Q 009648          226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~-~~~~~~~~~~~~g~V~v~  286 (530)
                      .+...|+.+|+++|.+++.    .++.++++|++.+|||+.....              .. .......+....+++|++
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~  230 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK  230 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence            5677899999999998864    5899999999999998643210              00 011111223334689999


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |+|++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       231 Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~  272 (372)
T 1db3_A          231 DYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (372)
T ss_dssp             HHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             HHHHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence            99999999998765   5899999999999999999999999864

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.95  E-value=3.4e-28  Score=264.08  Aligned_cols=242  Identities=16%  Similarity=0.136  Sum_probs=177.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHH---HHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN---LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~---l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..+|+|||||||||||++|+++|++.|++|++++|+..+...   +.+.+..+.....    ......+++++.+|+.|.
T Consensus       148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~----~~~~~~~v~~v~~Dl~d~  223 (508)
T 4f6l_B          148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET----VEMMLSNIEVIVGDFECM  223 (508)
T ss_dssp             CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHH----HHHHSTTEEEEEEBTTBC
T ss_pred             CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhccccc----chhccCceEEEecCCccc
Confidence            446899999999999999999999999999999999874332   2222222100000    001136899999999998


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC---------Ccccc-
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI-  224 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~---------~~~~~-  224 (530)
                      +.+. ++.++|+||||||.... ..++...+++|+.++.+|+++|.+ ++++|||+||.++..+.         .++.. 
T Consensus       224 ~~l~-~~~~~D~Vih~Aa~~~~-~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~  300 (508)
T 4f6l_B          224 DDVV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVY  300 (508)
T ss_dssp             SSCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSC
T ss_pred             ccCC-CccCCCEEEECCceecC-CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCccccccccc
Confidence            7777 78899999999997542 345677899999999999999998 67899999998871110         11111 


Q ss_pred             --ccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCcccccccc----------------eeecc-cCcccCCC
Q 009648          225 --LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN----------------ITLSQ-EDTLFGGQ  282 (530)
Q Consensus       225 --~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~~~~~~~~----------------~~~~~-~~~~~~g~  282 (530)
                        ..+...|+.+|+.+|+++++   .|++++|+|||+|||+.........                ..+.. ......++
T Consensus       301 ~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~  380 (508)
T 4f6l_B          301 KGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDF  380 (508)
T ss_dssp             SSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEEC
T ss_pred             ccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEE
Confidence              23567899999999999986   7999999999999999653321000                00111 11223357


Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcC
Q 009648          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP  328 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~  328 (530)
                      ++++|+|+++++++.++.  .+++||++++..+++.++.+++.++.
T Consensus       381 v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          381 SFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             EEHHHHHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             EcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            999999999999999876  68999999999999999999998865

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.95  E-value=2.4e-28  Score=254.52  Aligned_cols=235  Identities=12%  Similarity=-0.011  Sum_probs=178.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-----HHHHHHHHHHhhhhccccccCCCCCC-CeEEEEecCCCH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVE-MLELVECDLEKR  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-----~~~l~~~~~~~~l~~~~~~~g~~~~~-~v~~v~~Dl~d~  154 (530)
                      |+||||||+||||++|++.|+++|++|++++|+..+     +..+.....             .... +++++.+|+.|.
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d~   95 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-------------NVNKALMKLHYADLTDA   95 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------------------CCEEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc-------------cccccceEEEECCCCCH
Confidence            689999999999999999999999999999998753     111100000             0012 789999999999


Q ss_pred             hhHHHHhCC--CcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCC-----EEEEEcCCCccCCC----Cc
Q 009648          155 VQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKFG----FP  221 (530)
Q Consensus       155 ~sl~~a~~~--vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-----r~V~iSS~~v~~~~----~~  221 (530)
                      +++.+++++  +|+||||||.....  ..++...+++|+.++.+|+++|.+.+++     +|||+||.+++...    .+
T Consensus        96 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A           96 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence            999999975  69999999965432  2345667899999999999999987765     99999998764321    22


Q ss_pred             cccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc--------------cc-ceeecccCcccCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQ  282 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~--------------~~-~~~~~~~~~~~~g~  282 (530)
                      +....+...|+.+|+++|.+++.    .|+.++++|++.+|||+.....              .. ............++
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~  255 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  255 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence            23455677899999999998874    4899999999999999743210              00 00111112233458


Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++++|||++++.+++++.   +++||++++...++.++.+++.+++|..
T Consensus       256 v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~  301 (381)
T 1n7h_A          256 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLN  301 (381)
T ss_dssp             EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             EEHHHHHHHHHHHHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence            999999999999998865   5899999999999999999999999863

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=9.4e-27  Score=224.66  Aligned_cols=199  Identities=20%  Similarity=0.154  Sum_probs=156.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH-hCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll-~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++||||||+|+||++++++|+ ++|++|++++|+.+ +...+..                 ...+++++.+|+.|.+++
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~~~   67 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----------------DHERVTVIEGSFQNPGXL   67 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-----------------TSTTEEEEECCTTCHHHH
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-----------------CCCceEEEECCCCCHHHH
Confidence            4679999999999999999999 89999999999987 6554321                 126899999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccc---cccchh-HHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA---ILNLFW-GVLL  233 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~---~~~~~~-~Y~~  233 (530)
                      .++++++|+||||||..             |+. +++++++|++.+++|||++||.++........   ...... .|+.
T Consensus        68 ~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~  133 (221)
T 3r6d_A           68 EQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQ  133 (221)
T ss_dssp             HHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHH
T ss_pred             HHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHH
Confidence            99999999999999853             455 99999999999999999999988743211100   001112 7999


Q ss_pred             HHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeeccc-CcccCCCCCHHHHHHHHHHHH--hCCCCCCCcEEEEe
Q 009648          234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQE-DTLFGGQVSNLQVAELLACMA--KNRSLSYCKVVEVI  310 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~-~~~~~g~V~v~DVA~ai~~ll--~~~~~~~g~vynv~  310 (530)
                      +|+.+|++++..|++|++||||+++++...    ..+..... ....+.+++++|||+++++++  .++....++.+.+.
T Consensus       134 ~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~  209 (221)
T 3r6d_A          134 GERQARNVLRESNLNYTILRLTWLYNDPEX----TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVG  209 (221)
T ss_dssp             HHHHHHHHHHHSCSEEEEEEECEEECCTTC----CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEE
T ss_pred             HHHHHHHHHHhCCCCEEEEechhhcCCCCC----cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeec
Confidence            999999999999999999999999987221    11122222 222334799999999999999  87765578899998


Q ss_pred             CCC
Q 009648          311 AET  313 (530)
Q Consensus       311 ~~~  313 (530)
                      ++.
T Consensus       210 ~~~  212 (221)
T 3r6d_A          210 EPG  212 (221)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.95  E-value=5.2e-29  Score=238.15  Aligned_cols=198  Identities=21%  Similarity=0.203  Sum_probs=160.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++|+||||||+||||++|+++|+++|+  +|++++|+..+                       ...+++++.+|+.|.++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------------------~~~~~~~~~~D~~~~~~   60 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------------EHPRLDNPVGPLAELLP   60 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------------CCTTEECCBSCHHHHGG
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------------------cCCCceEEeccccCHHH
Confidence            457999999999999999999999998  99999998753                       02578899999999988


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      +.+++  +|+||||||.......++...+++|+.++.+++++|++.++++||++||.++..        .+...|+.+|+
T Consensus        61 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------~~~~~y~~sK~  130 (215)
T 2a35_A           61 QLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------KSSIFYNRVKG  130 (215)
T ss_dssp             GCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------TCSSHHHHHHH
T ss_pred             HHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------CCccHHHHHHH
Confidence            88888  999999999754434456677899999999999999999999999999988743        23457999999


Q ss_pred             HHHHHHHHCCCC-EEEEEcCcccCCCccccccccee---ecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNIT---LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       237 ~~E~~l~~~gl~-~tIvRPg~V~Gp~~~~~~~~~~~---~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      ++|++++..|++ +++||||++||++........+.   ...... ..++++++|+|++++.+++++.   +++||++++
T Consensus       131 ~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~  206 (215)
T 2a35_A          131 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPG-KYHGIEACDLARALWRLALEEG---KGVRFVESD  206 (215)
T ss_dssp             HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----C-HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHH
T ss_pred             HHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCC-CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHH
Confidence            999999999999 99999999999975421111110   000000 2246899999999999999875   889999986


Q ss_pred             C
Q 009648          313 T  313 (530)
Q Consensus       313 ~  313 (530)
                      +
T Consensus       207 ~  207 (215)
T 2a35_A          207 E  207 (215)
T ss_dssp             H
T ss_pred             H
Confidence            4

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.95  E-value=2.7e-27  Score=238.70  Aligned_cols=217  Identities=15%  Similarity=0.036  Sum_probs=159.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |||||||||||||++|+++|+++||+|++++|++.+                         ..   +.+|    +.....
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------------------~~---~~~~----~~~~~~   48 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------------------GR---ITWD----ELAASG   48 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------------------TE---EEHH----HHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------------------Ce---eecc----hhhHhh
Confidence            689999999999999999999999999999998642                         11   1222    233466


Q ss_pred             hCCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhcCCC--EEEEEcCCCccCCC-----Cccccccc
Q 009648          161 LGNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFG-----FPAAILNL  227 (530)
Q Consensus       161 ~~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~gv~--r~V~iSS~~v~~~~-----~~~~~~~~  227 (530)
                      ++++|+|||+||......      ......++.|+.++.+|++++++.+++  +||++||.+++...     .++.+..+
T Consensus        49 l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~  128 (298)
T 4b4o_A           49 LPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD  128 (298)
T ss_dssp             CCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred             ccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence            789999999998532211      112345788999999999999987655  57888887664332     22233444


Q ss_pred             hhHHHHHHHHHHHHH--HHCCCCEEEEEcCcccCCCcccccccc-------eeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          228 FWGVLLWKRKAEEAL--IASGLPYTIVRPGGMERPTDAYKETHN-------ITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l--~~~gl~~tIvRPg~V~Gp~~~~~~~~~-------~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      ...|+..+...|...  ...+++++++|++.|||+++.......       ......+....++||++|+|+++++++++
T Consensus       129 ~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~  208 (298)
T 4b4o_A          129 FDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEA  208 (298)
T ss_dssp             SSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred             cchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhC
Confidence            455666666555543  357899999999999999764321111       11112334445789999999999999999


Q ss_pred             CCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       299 ~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      +.  .+++||+++++.+++.++.+.+.+++|+.
T Consensus       209 ~~--~~g~yn~~~~~~~t~~e~~~~ia~~lgrp  239 (298)
T 4b4o_A          209 NH--VHGVLNGVAPSSATNAEFAQTFGAALGRR  239 (298)
T ss_dssp             TT--CCEEEEESCSCCCBHHHHHHHHHHHHTCC
T ss_pred             CC--CCCeEEEECCCccCHHHHHHHHHHHhCcC
Confidence            86  47799999999999999999999999864

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.95  E-value=4.2e-28  Score=240.82  Aligned_cols=213  Identities=18%  Similarity=0.055  Sum_probs=170.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+||||++|+++|+++|++|++++|+..+..                      ..+++++.+|+.|.+.+.+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~~   59 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------------------EAHEEIVACDLADAQAVHD   59 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------------------CTTEEECCCCTTCHHHHHH
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------------------CCCccEEEccCCCHHHHHH
Confidence            468999999999999999999999999999999874310                      1467899999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC------CccccccchhHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVLL  233 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~------~~~~~~~~~~~Y~~  233 (530)
                      +++++|+||||||..  ...++...+++|+.++.+|+++|++.+++||||+||.+++...      .++.+..+...|+.
T Consensus        60 ~~~~~d~vi~~a~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~  137 (267)
T 3ay3_A           60 LVKDCDGIIHLGGVS--VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL  137 (267)
T ss_dssp             HHTTCSEEEECCSCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred             HHcCCCEEEECCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence            999999999999965  2234456789999999999999999999999999998764321      12233456678999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       234 sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +|+.+|.+++.    .|+++++|||+++|+...            .......+++++|+|++++.+++++. ..+++|++
T Consensus       138 sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~-~~~~~~~~  204 (267)
T 3ay3_A          138 SKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------DARMMATWLSVDDFMRLMKRAFVAPK-LGCTVVYG  204 (267)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------SHHHHHHBCCHHHHHHHHHHHHHSSC-CCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------CCCeeeccccHHHHHHHHHHHHhCCC-CCceeEec
Confidence            99999998763    699999999999984210            11122357999999999999999875 34688999


Q ss_pred             eCCCCCChhHHHHHHHhcCCCC
Q 009648          310 IAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       310 ~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      .++...++.++.++  +.+|..
T Consensus       205 ~~~~~~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          205 ASANTESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             CCSCSSCCBCCGGG--GGGCCC
T ss_pred             CCCccccccCHHHH--HHcCCC
Confidence            98877777777776  566643

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=1e-27  Score=242.39  Aligned_cols=224  Identities=18%  Similarity=0.208  Sum_probs=168.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-----hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-----k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +|+|||||||||||++|+++|+++|++|++++|+..     +...+. .+.               ..+++++.+|+.|.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~D~~d~   67 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFK---------------QLGAKLIEASLDDH   67 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHH---------------TTTCEEECCCSSCH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHH---------------hCCeEEEeCCCCCH
Confidence            568999999999999999999999999999999853     222221 111               15789999999999


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccc-hhHHH
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVL  232 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~Y~  232 (530)
                      +++.++++++|+||||+|.....         .|+.++.+++++|+++| ++|||+ |+.+..... ......+ ...| 
T Consensus        68 ~~l~~~~~~~d~vi~~a~~~~~~---------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~-~~~~~~p~~~~y-  135 (313)
T 1qyd_A           68 QRLVDALKQVDVVISALAGGVLS---------HHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDI-MEHALQPGSITF-  135 (313)
T ss_dssp             HHHHHHHTTCSEEEECCCCSSSS---------TTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTS-CCCCCSSTTHHH-
T ss_pred             HHHHHHHhCCCEEEECCccccch---------hhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccc-cccCCCCCcchH-
Confidence            99999999999999999864321         25678899999999998 999996 655532111 0111223 3457 


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc---------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCC
Q 009648          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (530)
Q Consensus       233 ~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~---------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~  303 (530)
                      .+|+.+|+++++.|++|++||||++++.......         ...+.+...+.....+++++|+|++++.++.++. ..
T Consensus       136 ~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~  214 (313)
T 1qyd_A          136 IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TL  214 (313)
T ss_dssp             HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GS
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cC
Confidence            9999999999999999999999999874221111         1111111122223357999999999999998875 45


Q ss_pred             CcEEEEeCC-CCCChhHHHHHHHhcCCCCC
Q 009648          304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       304 g~vynv~~~-~~~t~~~i~ell~~v~g~~~  332 (530)
                      +++|++.++ +..++.++.+++.+++|+..
T Consensus       215 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~  244 (313)
T 1qyd_A          215 NKTMYIRPPMNILSQKEVIQIWERLSEQNL  244 (313)
T ss_dssp             SSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred             CceEEEeCCCCccCHHHHHHHHHHhcCCCC
Confidence            788888875 67899999999999998754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.95  E-value=8.1e-28  Score=243.61  Aligned_cols=223  Identities=15%  Similarity=0.082  Sum_probs=172.5

Q ss_pred             EEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +||||||+||||++|+++|+++  |++|++++|+....                        .+++++.+|+.|.+++.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------------------~~~~~~~~D~~d~~~~~~   56 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------------------GGIKFITLDVSNRDEIDR   56 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------------------TTCCEEECCTTCHHHHHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------------------cCceEEEecCCCHHHHHH
Confidence            4999999999999999999998  89999999976321                        146789999999999999


Q ss_pred             HhC--CCcEEEEcccCCCC-ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC------ccccccchhH
Q 009648          160 ALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLFWG  230 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~-~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~------~~~~~~~~~~  230 (530)
                      +++  ++|+||||||.... ...++...+++|+.++.+|+++|++.++++|||+||.+++....      ++.+..+...
T Consensus        57 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           57 AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             HHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            997  89999999986432 12345567899999999999999999999999999987743321      2223456788


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc---------------cccceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~---------------~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|+++|++++.    .|+++++||++++||+.....               ....+..........+++|++|+|++
T Consensus       137 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  216 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA  216 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence            99999999988763    599999999999999642110               00111111122223457999999999


Q ss_pred             HHHHHhCCCCC--CCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          292 LACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       292 i~~ll~~~~~~--~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ++.+++++...  .+++||++++ ..++.++.+++.++++
T Consensus       217 ~~~~l~~~~~~~~~g~~~~i~~~-~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          217 LVDLYEADRDKLVLRNGYNVTAY-TFTPSELYSKIKERIP  255 (317)
T ss_dssp             HHHHHHCCGGGCSSCSCEECCSE-EECHHHHHHHHHTTCC
T ss_pred             HHHHHhCCccccccCceEecCCc-cccHHHHHHHHHHHCC
Confidence            99999876421  3589999974 5889999999999887

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1.4e-27  Score=244.65  Aligned_cols=234  Identities=16%  Similarity=0.083  Sum_probs=177.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-------CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-------~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      +++|+||||||+||||++|+++|+++|       ++|++++|+..+...                   ....+++++.+|
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~D   72 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------------------GFSGAVDARAAD   72 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------------------TCCSEEEEEECC
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------------------ccCCceeEEEcC
Confidence            456799999999999999999999999       899999998643211                   012578999999


Q ss_pred             CCCHhhHHHHh-CCCcEEEEcccCCCC-ccCCCCcchHhHHHHHHHHHHHHHhcC-----CCEEEEEcCCCccCCC----
Q 009648          151 LEKRVQIEPAL-GNASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAK-----VNHFIMVSSLGTNKFG----  219 (530)
Q Consensus       151 l~d~~sl~~a~-~~vD~VI~~Ag~~~~-~~~~~~~~~~vNv~gt~~Ll~aa~~~g-----v~r~V~iSS~~v~~~~----  219 (530)
                      +.|.+++.+++ +++|+||||||.... ...++...+++|+.++.+|+++|++.+     +++||++||.+++...    
T Consensus        73 l~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~  152 (342)
T 2hrz_A           73 LSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP  152 (342)
T ss_dssp             TTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred             CCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence            99999999999 589999999996531 223456678999999999999999876     8899999998764321    


Q ss_pred             -CccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccC-CCcccccc--------------cceeecccCccc
Q 009648          220 -FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER-PTDAYKET--------------HNITLSQEDTLF  279 (530)
Q Consensus       220 -~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~G-p~~~~~~~--------------~~~~~~~~~~~~  279 (530)
                       .++.+..+...|+.+|+++|+++++    .++++++||+.+||| |+......              ....+..++...
T Consensus       153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred             cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence             1223344677899999999998874    478999999999998 65421110              001111111112


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCC--CCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRSL--SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~--~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ..+++++|+|++++.+++.+..  ..+++||+++ ...++.++.+++.+++|..
T Consensus       233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~  285 (342)
T 2hrz_A          233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEK  285 (342)
T ss_dssp             EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHH
T ss_pred             eeeEehHHHHHHHHHHHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCcc
Confidence            2368999999999999987631  1478999965 5689999999999998864

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.95  E-value=8.9e-27  Score=234.91  Aligned_cols=219  Identities=18%  Similarity=0.198  Sum_probs=166.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-------hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +|+|||||||||||++|+++|+++|++|++++|+.       ++...+. .+.               ..+++++.+|+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~l~---------------~~~v~~v~~D~~   65 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELID-NYQ---------------SLGVILLEGDIN   65 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHH-HHH---------------HTTCEEEECCTT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHH-HHH---------------hCCCEEEEeCCC
Confidence            46799999999999999999999999999999987       4433321 111               146899999999


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccc-hhH
Q 009648          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWG  230 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~  230 (530)
                      |.+++.++++++|+||||+|...             +.++.+++++|+++| ++|||+ |+.+...  .+.....+ ...
T Consensus        66 d~~~l~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~  129 (307)
T 2gas_A           66 DHETLVKAIKQVDIVICAAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDV--DRHDAVEPVRQV  129 (307)
T ss_dssp             CHHHHHHHHTTCSEEEECSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCT--TSCCCCTTHHHH
T ss_pred             CHHHHHHHHhCCCEEEECCcccc-------------cccHHHHHHHHHhcCCceEEee-cccccCc--ccccCCCcchhH
Confidence            99999999999999999998642             346789999999998 999984 6554321  11111223 356


Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc--------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCC
Q 009648          231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS  302 (530)
Q Consensus       231 Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~--------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~  302 (530)
                      | .+|+.+|+++++.|++|++||||++++.......        ...+.+...+.....+++++|||++++.++.++. .
T Consensus       130 y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~  207 (307)
T 2gas_A          130 F-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-T  207 (307)
T ss_dssp             H-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-G
T ss_pred             H-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-c
Confidence            8 9999999999999999999999999986432211        1112222222233457999999999999998875 4


Q ss_pred             CCcEEEEeCC-CCCChhHHHHHHHhcCCCCC
Q 009648          303 YCKVVEVIAE-TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       303 ~g~vynv~~~-~~~t~~~i~ell~~v~g~~~  332 (530)
                      .+++|++.++ ..+++.++.+++.+++|...
T Consensus       208 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~  238 (307)
T 2gas_A          208 LNKAVHIRLPKNYLTQNEVIALWEKKIGKTL  238 (307)
T ss_dssp             TTEEEECCCGGGEEEHHHHHHHHHHHHTSCC
T ss_pred             cCceEEEeCCCCcCCHHHHHHHHHHHhCCCC
Confidence            5888888865 57899999999999998754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.95  E-value=7.8e-27  Score=240.66  Aligned_cols=230  Identities=13%  Similarity=0.076  Sum_probs=170.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +|+||||||+||||++|+++|+++|     ++|++++|+.....                    ....+++++.+|+.|.
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------------~~~~~~~~~~~Dl~d~   60 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------------HEDNPINYVQCDISDP   60 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------------CCSSCCEEEECCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------------cccCceEEEEeecCCH
Confidence            3689999999999999999999999     99999999875321                    0125789999999999


Q ss_pred             hhHHHHhCC---CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEE-------EEcCCCccCCC---
Q 009648          155 VQIEPALGN---ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFI-------MVSSLGTNKFG---  219 (530)
Q Consensus       155 ~sl~~a~~~---vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V-------~iSS~~v~~~~---  219 (530)
                      +++.+++++   +|+||||||...   .+....+++|+.++.+|+++|++.  ++++||       |+||.+++...   
T Consensus        61 ~~~~~~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           61 DDSQAKLSPLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             HHHHHHHTTCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             HHHHHHHhcCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccC
Confidence            999999988   999999999653   345567899999999999999998  899998       78988663221   


Q ss_pred             ----Cccccccc-hhHHHHHHHHHHHHHHHCC-CCEEEEEcCcccCCCccccccc----------------ceeecccC-
Q 009648          220 ----FPAAILNL-FWGVLLWKRKAEEALIASG-LPYTIVRPGGMERPTDAYKETH----------------NITLSQED-  276 (530)
Q Consensus       220 ----~~~~~~~~-~~~Y~~sK~~~E~~l~~~g-l~~tIvRPg~V~Gp~~~~~~~~----------------~~~~~~~~-  276 (530)
                          .++.+..+ ...|......+.++.+..| +++++|||++|||++.......                .+.+...+ 
T Consensus       138 ~~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~  217 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKA  217 (364)
T ss_dssp             CSSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHH
T ss_pred             CCCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcc
Confidence                11111222 3457433333333333356 9999999999999976421110                00101111 


Q ss_pred             --cccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          277 --TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       277 --~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                        ..+...++++|+|++++.+++++. ..+++||++++...++.++.+++.+++|....
T Consensus       218 ~~~~~~~~~~v~Dva~a~~~~~~~~~-~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~  275 (364)
T 2v6g_A          218 AWDGYSDCSDADLIAEHHIWAAVDPY-AKNEAFNVSNGDVFKWKHFWKVLAEQFGVECG  275 (364)
T ss_dssp             HHHSCBCCEEHHHHHHHHHHHHHCGG-GTTEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred             cccccCCCCcHHHHHHHHHHHHhCCC-CCCceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence              112345788999999999998874 35789999999989999999999999987643

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.95  E-value=5.7e-27  Score=263.93  Aligned_cols=243  Identities=15%  Similarity=0.113  Sum_probs=180.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+||||++|+++|+++|++|++++|+........+.+...  .          ..+++++.+|+.|.+++
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~----------~~~v~~v~~Dl~d~~~l   76 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--T----------KHHIPFYEVDLCDRKGL   76 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--H----------TSCCCEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc--c----------CCceEEEEcCCCCHHHH
Confidence            45689999999999999999999999999999999765322222222111  0          15688999999999999


Q ss_pred             HHHhC--CCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC---------Ccccc
Q 009648          158 EPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI  224 (530)
Q Consensus       158 ~~a~~--~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~---------~~~~~  224 (530)
                      .++++  ++|+||||||.....  ..+....+++|+.++.+|+++|++.++++||++||.+++...         .++..
T Consensus        77 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~  156 (699)
T 1z45_A           77 EKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECP  156 (699)
T ss_dssp             HHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             HHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCC
Confidence            99998  899999999965321  122345789999999999999999999999999998763211         12223


Q ss_pred             ccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccc--cc------cc--------------ceeecc--
Q 009648          225 LNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY--KE------TH--------------NITLSQ--  274 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~--~~------~~--------------~~~~~~--  274 (530)
                      ..+...|+.+|+++|++++.      .|++++||||++|||++...  ..      ..              .+.+..  
T Consensus       157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (699)
T 1z45_A          157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD  236 (699)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence            44567899999999999874      58999999999999975211  00      00              011111  


Q ss_pred             ----cCcccCCCCCHHHHHHHHHHHHhCC-----CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          275 ----EDTLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       275 ----~~~~~~g~V~v~DVA~ai~~ll~~~-----~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                          .+....++||++|||++++.++++.     ....+++|||+++...++.++.+++.+++|...
T Consensus       237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~  303 (699)
T 1z45_A          237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDL  303 (699)
T ss_dssp             ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred             ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCC
Confidence                1122235799999999999998742     112368999999999999999999999998753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=1.2e-27  Score=233.43  Aligned_cols=203  Identities=19%  Similarity=0.229  Sum_probs=158.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++|+||||||+||||++|+++|+++|+  +|++++|+..+...+                   ...+++++.+|+.|.++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~d~~~   77 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------------AYKNVNQEVVDFEKLDD   77 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------------GGGGCEEEECCGGGGGG
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------------------ccCCceEEecCcCCHHH
Confidence            467999999999999999999999999  999999987643221                   01468899999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      +.++++++|+||||||..... .++...+++|+.++.+++++|++.++++||++||.++...        +...|+.+|+
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--------~~~~Y~~sK~  148 (242)
T 2bka_A           78 YASAFQGHDVGFCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVKG  148 (242)
T ss_dssp             GGGGGSSCSEEEECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred             HHHHhcCCCEEEECCCccccc-CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC--------CcchHHHHHH
Confidence            999999999999999964321 1235678899999999999999999999999999877431        2357999999


Q ss_pred             HHHHHHHHCCC-CEEEEEcCcccCCCcccccccce---eecccC--cccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 009648          237 KAEEALIASGL-PYTIVRPGGMERPTDAYKETHNI---TLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI  310 (530)
Q Consensus       237 ~~E~~l~~~gl-~~tIvRPg~V~Gp~~~~~~~~~~---~~~~~~--~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~  310 (530)
                      ++|++++..++ ++++||||+|+|+.........+   ......  ...+.+++++|+|+++++++.++.  .++.|.+.
T Consensus       149 ~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~--~~~~~~~~  226 (242)
T 2bka_A          149 EVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELLE  226 (242)
T ss_dssp             HHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEEE
T ss_pred             HHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc--ccCeeEee
Confidence            99999999999 59999999999996432110000   000000  012357999999999999999876  35666665


Q ss_pred             C
Q 009648          311 A  311 (530)
Q Consensus       311 ~  311 (530)
                      +
T Consensus       227 ~  227 (242)
T 2bka_A          227 N  227 (242)
T ss_dssp             H
T ss_pred             H
Confidence            5

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.94  E-value=1.8e-26  Score=239.65  Aligned_cols=220  Identities=18%  Similarity=0.143  Sum_probs=168.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec-CCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-LEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-l~d~~sl~  158 (530)
                      +|+|||||||||||++|++.|+++|++|++++|+.++...  +.+..              ..+++++.+| +.|.+++.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~--------------~~~v~~v~~D~l~d~~~l~   68 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--------------IPNVTLFQGPLLNNVPLMD   68 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--------------STTEEEEESCCTTCHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh--------------cCCcEEEECCccCCHHHHH
Confidence            5789999999999999999999999999999999876421  11110              1478999999 99999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      ++++++|+||||++...         .+.|..+ ++++++|++.| ++||||+||.+...++.     .....|+.+|++
T Consensus        69 ~~~~~~d~Vi~~a~~~~---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----~~~~~y~~sK~~  133 (352)
T 1xgk_A           69 TLFEGAHLAFINTTSQA---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----WPAVPMWAPKFT  133 (352)
T ss_dssp             HHHTTCSEEEECCCSTT---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----CCCCTTTHHHHH
T ss_pred             HHHhcCCEEEEcCCCCC---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----CCCccHHHHHHH
Confidence            99999999999987532         1346766 99999999999 99999999986423322     223569999999


Q ss_pred             HHHHHHHCCCCEEEEEcCcccCCCccccc----------ccce--eecccCcccCCCCCH-HHHHHHHHHHHhCCC-CCC
Q 009648          238 AEEALIASGLPYTIVRPGGMERPTDAYKE----------THNI--TLSQEDTLFGGQVSN-LQVAELLACMAKNRS-LSY  303 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~----------~~~~--~~~~~~~~~~g~V~v-~DVA~ai~~ll~~~~-~~~  303 (530)
                      +|+++++.|+++++|||+ +||++.....          ...+  .+.........++++ +|+|++++.+++++. ...
T Consensus       134 ~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~  212 (352)
T 1xgk_A          134 VENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN  212 (352)
T ss_dssp             HHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHT
T ss_pred             HHHHHHHcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhC
Confidence            999999999999999998 5676432110          0011  001111122247998 899999999998752 124


Q ss_pred             CcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          304 CKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       304 g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +++||+++ ...++.++.+.+.+++|...
T Consensus       213 g~~~~l~~-~~~s~~e~~~~i~~~~G~~~  240 (352)
T 1xgk_A          213 GHRIALTF-ETLSPVQVCAAFSRALNRRV  240 (352)
T ss_dssp             TCEEEECS-EEECHHHHHHHHHHHHTSCE
T ss_pred             CeEEEEec-CCCCHHHHHHHHHHHHCCCC
Confidence            89999997 45899999999999998753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.94  E-value=1.6e-26  Score=225.84  Aligned_cols=202  Identities=18%  Similarity=0.161  Sum_probs=150.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||++|++.|+++| ++|++++|+.++...+                   ...+++++.+|+.|.++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------------~~~~~~~~~~Dl~d~~~   81 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------------YPTNSQIIMGDVLNHAA   81 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------------CCTTEEEEECCTTCHHH
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------------ccCCcEEEEecCCCHHH
Confidence            346789999999999999999999999 9999999998654321                   12579999999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc---ccccchhHHHH
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLL  233 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~---~~~~~~~~Y~~  233 (530)
                      +.++++++|+||||+|...            ....+++++++|++.+++|||++||.+++......   ........+..
T Consensus        82 ~~~~~~~~D~vv~~a~~~~------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~  149 (236)
T 3qvo_A           82 LKQAMQGQDIVYANLTGED------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLK  149 (236)
T ss_dssp             HHHHHTTCSEEEEECCSTT------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGH
T ss_pred             HHHHhcCCCEEEEcCCCCc------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHH
Confidence            9999999999999998521            12457899999999999999999998774321110   00011112334


Q ss_pred             HHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      .+..+|+.++..|+++++||||+++++....    ...........+.+++++|||+++++++.++....+++|+|.++.
T Consensus       150 ~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~----~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          150 PFRRAADAIEASGLEYTILRPAWLTDEDIID----YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             HHHHHHHHHHTSCSEEEEEEECEEECCSCCC----CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             HHHHHHHHHHHCCCCEEEEeCCcccCCCCcc----eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            5566778888899999999999999874321    111122222334579999999999999999875579999999986


Q ss_pred             C
Q 009648          314 T  314 (530)
Q Consensus       314 ~  314 (530)
                      .
T Consensus       226 ~  226 (236)
T 3qvo_A          226 T  226 (236)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.94  E-value=4.9e-27  Score=263.04  Aligned_cols=237  Identities=14%  Similarity=0.148  Sum_probs=180.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.++|+||||||+||||++|+++|+++ |++|++++|+..+...+                  ....+++++.+|+.|.+
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~------------------~~~~~v~~v~~Dl~d~~  373 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------------LNHPHFHFVEGDISIHS  373 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG------------------TTCTTEEEEECCTTTCH
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh------------------ccCCceEEEECCCCCcH
Confidence            346789999999999999999999998 89999999987653321                  01257999999999976


Q ss_pred             h-HHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----cccc---
Q 009648          156 Q-IEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAI---  224 (530)
Q Consensus       156 s-l~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~~---  224 (530)
                      + +.++++++|+||||||....  ...++...+++|+.++.+++++|++++ +||||+||.+++....     ++..   
T Consensus       374 ~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T 1z7e_A          374 EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLI  452 (660)
T ss_dssp             HHHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEE
T ss_pred             HHHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccc
Confidence            5 77888999999999996542  123445678999999999999999998 8999999987643211     1111   


Q ss_pred             ----ccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccc-------------------cccceeecccCc
Q 009648          225 ----LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDT  277 (530)
Q Consensus       225 ----~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~-------------------~~~~~~~~~~~~  277 (530)
                          ..+.+.|+.+|+++|++++    +.|+++++||||+|||++....                   ....+.+...+.
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~  532 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  532 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGC
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCC
Confidence                1345689999999999885    3699999999999999975310                   001111111222


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC-CCChhHHHHHHHhcCCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~-~~t~~~i~ell~~v~g~~~  332 (530)
                      ....+++++|+|++++.+++++. ...+++||+++++ .+++.++.+++.+++|...
T Consensus       533 ~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~  589 (660)
T 1z7e_A          533 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP  589 (660)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred             eEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence            33458999999999999998753 1358899999986 7899999999999988653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=3.2e-26  Score=228.06  Aligned_cols=232  Identities=15%  Similarity=0.156  Sum_probs=174.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||++++++|+++|++|++++|+..+...+.+.+.              ...++.++.+|+.|.+++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~   79 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG--------------SPDVISFVHCDVTKDEDV   79 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------CTTTEEEEECCTTCHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC--------------CCCceEEEECCCCCHHHH
Confidence            467899999999999999999999999999999999876555433221              113799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~  218 (530)
                      .++++       ++|+||||||.....        ..++...+++|+.++.++++++..    .+.++||++||..+...
T Consensus        80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  159 (278)
T 2bgk_A           80 RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA  159 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCC
Confidence            88775       799999999964321        122355789999999999998875    36779999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cc-e---eecccCcccCCCCCHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-I---TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~-~---~~~~~~~~~~g~V~v~  286 (530)
                      ..     .....|+.+|++.|.+++.       .|+++++||||+|+++....... .. .   .........+.+++++
T Consensus       160 ~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 2bgk_A          160 GE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE  234 (278)
T ss_dssp             CT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH
T ss_pred             CC-----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH
Confidence            11     1456799999999988763       58999999999999986432111 00 0   0001111234578999


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHhcC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIP  328 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~v~  328 (530)
                      |+|+++++++.+. ....|++|++.++...++.++.+++.+++
T Consensus       235 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          235 DVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             HHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            9999999999764 23468999999998888888888877654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.94  E-value=9.9e-27  Score=230.38  Aligned_cols=214  Identities=15%  Similarity=0.107  Sum_probs=169.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+ +|++|++++|+...                    .    .+   +.+|+.|.+++.++
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~--------------------~----~~---~~~Dl~~~~~~~~~   52 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI--------------------Q----GG---YKLDLTDFPRLEDF   52 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC--------------------T----TC---EECCTTSHHHHHHH
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC--------------------C----CC---ceeccCCHHHHHHH
Confidence            479999999999999999999 48999999998631                    0    12   78999999999999


Q ss_pred             hCC--CcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC----CccccccchhHHH
Q 009648          161 LGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGVL  232 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~----~~~~~~~~~~~Y~  232 (530)
                      +++  +|+||||||.....  ..++...+++|+.++.+++++|++.++ +||++||.+++...    .++....+...|+
T Consensus        53 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           53 IIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             HHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            986  99999999965432  235567799999999999999999887 99999998774321    1222344567899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEcCcccCCCcccc-------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCc
Q 009648          233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK  305 (530)
Q Consensus       233 ~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~-------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~  305 (530)
                      .+|+++|++++.  +++++||+++|||+.....       ....+.+. ++  ...+++++|+|++++.+++++.   ++
T Consensus       132 ~sK~~~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~dva~~i~~~~~~~~---~g  203 (273)
T 2ggs_A          132 LSKLLGETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAF-KG--YYSPISARKLASAILELLELRK---TG  203 (273)
T ss_dssp             HHHHHHHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEE-SC--EECCCBHHHHHHHHHHHHHHTC---CE
T ss_pred             HHHHHHHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEee-cC--CCCceEHHHHHHHHHHHHhcCc---CC
Confidence            999999999987  8999999999998432110       01111111 11  4568999999999999998864   56


Q ss_pred             EEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          306 VVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       306 vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +||+.+ ...++.++.+++.+++|...
T Consensus       204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~  229 (273)
T 2ggs_A          204 IIHVAG-ERISRFELALKIKEKFNLPG  229 (273)
T ss_dssp             EEECCC-CCEEHHHHHHHHHHHTTCCS
T ss_pred             eEEECC-CcccHHHHHHHHHHHhCCCh
Confidence            999999 88999999999999998764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=3.3e-26  Score=228.88  Aligned_cols=235  Identities=14%  Similarity=0.141  Sum_probs=163.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+....          ....++.++.+|++|.+++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~   73 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----------VSEQNVNSVVADVTTDAGQ   73 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----------cCCCceeEEecccCCHHHH
Confidence            457899999999999999999999999999999999887776655442210          1124689999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCcc
Q 009648          158 EPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTN  216 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~  216 (530)
                      .++++       ++|+||||||....          +..++...+++|+.++.++++++...    + ++||++||....
T Consensus        74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~  152 (278)
T 1spx_A           74 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG  152 (278)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc
Confidence            88775       89999999996432          22334567899999999999887653    6 799999998652


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--ccce-------eecccCcccC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNI-------TLSQEDTLFG  280 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~~~~-------~~~~~~~~~~  280 (530)
                      ..+     ......|+.+|++.+.+++.       .|+++++||||+|+++......  ....       .........+
T Consensus       153 ~~~-----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (278)
T 1spx_A          153 LHA-----TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG  227 (278)
T ss_dssp             SSC-----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS
T ss_pred             ccC-----CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCc
Confidence            121     22356799999999988753       6899999999999988532110  0000       0000011234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-C-CCCcEEEEeCCCCCChhHHHHHHHhcC
Q 009648          281 GQVSNLQVAELLACMAKNRS-L-SYCKVVEVIAETTAPLTPMEELLAKIP  328 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~-~~g~vynv~~~~~~t~~~i~ell~~v~  328 (530)
                      .+++++|||+++++++.++. . ..|++|++.++...++.++++++.++.
T Consensus       228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            57899999999999997643 1 358999999998888899998888764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=1.1e-26  Score=236.24  Aligned_cols=220  Identities=15%  Similarity=0.133  Sum_probs=165.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-h-----hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-Q-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~-----k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +|+||||||||+||++|+++|+++|++|++++|+. .     +...+. .+.               ..+++++.+|+.|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~---------------~~~v~~v~~D~~d   67 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFR---------------SMGVTIIEGEMEE   67 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHH---------------HTTCEEEECCTTC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-Hhh---------------cCCcEEEEecCCC
Confidence            46799999999999999999999999999999986 2     222221 111               1568999999999


Q ss_pred             HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccc-hhHH
Q 009648          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGV  231 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~Y  231 (530)
                      .+++.++++++|+||||+|...             +.++.+++++|+++| ++|||+ |+.+...  .+.....+ ...|
T Consensus        68 ~~~l~~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~y  131 (321)
T 3c1o_A           68 HEKMVSVLKQVDIVISALPFPM-------------ISSQIHIINAIKAAGNIKRFLP-SDFGCEE--DRIKPLPPFESVL  131 (321)
T ss_dssp             HHHHHHHHTTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCG--GGCCCCHHHHHHH
T ss_pred             HHHHHHHHcCCCEEEECCCccc-------------hhhHHHHHHHHHHhCCccEEec-cccccCc--cccccCCCcchHH
Confidence            9999999999999999998532             456799999999998 999983 5544311  11111222 4568


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccc--------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~--------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~  303 (530)
                       .+|+.+|+++++.|++|++|||+++++......        ....+.+.........+++++|||++++.++.++. ..
T Consensus       132 -~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~  209 (321)
T 3c1o_A          132 -EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR-CC  209 (321)
T ss_dssp             -HHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG-GT
T ss_pred             -HHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc-cc
Confidence             999999999999999999999999987532110        11112222222233457999999999999999875 45


Q ss_pred             CcEEEEeCC-CCCChhHHHHHHHhcCCCCCC
Q 009648          304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       304 g~vynv~~~-~~~t~~~i~ell~~v~g~~~~  333 (530)
                      +++|++.++ ..+++.++.+++.+++|+...
T Consensus       210 g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~  240 (321)
T 3c1o_A          210 NRIVIYRPPKNIISQNELISLWEAKSGLSFK  240 (321)
T ss_dssp             TEEEECCCGGGEEEHHHHHHHHHHHHTSCCC
T ss_pred             CeEEEEeCCCCcccHHHHHHHHHHHcCCcce
Confidence            888999864 678999999999999997643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.94  E-value=4e-26  Score=224.29  Aligned_cols=221  Identities=12%  Similarity=0.124  Sum_probs=166.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||++++++|+++|++|++++|+.++...+.+++...             ..++.++.+|+.|.+++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   75 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------------GGQAFACRCDITSEQEL   75 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-------------CCceEEEEcCCCCHHHH
Confidence            56789999999999999999999999999999999988777666555432             25789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc-----cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG-------NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~-----~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++       ++|+||||||.....     ..++...+++|+.++.++++++.    +.+.++||++||......   
T Consensus        76 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---  152 (255)
T 1fmc_A           76 SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK---  152 (255)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC---
Confidence            88775       899999999965332     22245668899999999988875    457789999999876432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ..+...|+.+|++.|.+++.       .|+++++||||+++++.........+ .........+.+++++|+|++++
T Consensus       153 ---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  229 (255)
T 1fmc_A          153 ---NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL  229 (255)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHH
T ss_pred             ---CCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence               23456799999999988753       48999999999999874321110000 00011122345789999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCCCCCh
Q 009648          294 CMAKNRS-LSYCKVVEVIAETTAPL  317 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~~~t~  317 (530)
                      +++.+.. ...|++|++.++...++
T Consensus       230 ~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          230 FLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             HHhCCccccCCCcEEEECCceeccC
Confidence            9997643 23588999999876553

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=8.4e-27  Score=235.19  Aligned_cols=224  Identities=18%  Similarity=0.195  Sum_probs=166.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH--HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|+|||||||||||++|++.|+++|++|++++|+....  ....+.+..+            ...+++++.+|+.|.+++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l------------~~~~v~~v~~D~~d~~~l   71 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDDHASL   71 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTCHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH------------HhCCCEEEEeccCCHHHH
Confidence            56899999999999999999999999999999985421  1111111111            025789999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccc-hhHHHHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWK  235 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~Y~~sK  235 (530)
                      .++++++|+||||+|...             +.++.+++++|+++| ++|||+ |+.+...  .+.....+ ...| .+|
T Consensus        72 ~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~y-~sK  134 (308)
T 1qyc_A           72 VEAVKNVDVVISTVGSLQ-------------IESQVNIIKAIKEVGTVKRFFP-SEFGNDV--DNVHAVEPAKSVF-EVK  134 (308)
T ss_dssp             HHHHHTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCT--TSCCCCTTHHHHH-HHH
T ss_pred             HHHHcCCCEEEECCcchh-------------hhhHHHHHHHHHhcCCCceEee-cccccCc--cccccCCcchhHH-HHH
Confidence            999999999999998532             345789999999998 999985 6655321  11112223 3457 999


Q ss_pred             HHHHHHHHHCCCCEEEEEcCcccCCCcccc--------cccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEE
Q 009648          236 RKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV  307 (530)
Q Consensus       236 ~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~--------~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vy  307 (530)
                      +.+|+++++.|+++++||||++++......        ....+.+...+.....+++++|+|++++.++.++. ..+++|
T Consensus       135 ~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~  213 (308)
T 1qyc_A          135 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTL  213 (308)
T ss_dssp             HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEE
T ss_pred             HHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc-ccCeEE
Confidence            999999999999999999999987422111        11112222222233457999999999999998765 458889


Q ss_pred             EEeCC-CCCChhHHHHHHHhcCCCCCC
Q 009648          308 EVIAE-TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       308 nv~~~-~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ++.++ ...++.++.+++.+++|+...
T Consensus       214 ~~~g~~~~~s~~e~~~~~~~~~g~~~~  240 (308)
T 1qyc_A          214 YLRLPANTLSLNELVALWEKKIDKTLE  240 (308)
T ss_dssp             ECCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             EEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence            98865 578999999999999997643

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=2e-26  Score=234.15  Aligned_cols=219  Identities=16%  Similarity=0.163  Sum_probs=165.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++||||||||+||++|+++|+++|++|++++|+.. +...+. .+.               ..+++++.+|+.|.+++.
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~l~---------------~~~v~~v~~Dl~d~~~l~   74 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLD-EFQ---------------SLGAIIVKGELDEHEKLV   74 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHH-HHH---------------HTTCEEEECCTTCHHHHH
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHH-Hhh---------------cCCCEEEEecCCCHHHHH
Confidence            358999999999999999999999999999999875 332221 111               146899999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEEEcCCCccCCCCccccccc-hhHHHHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWKR  236 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~Y~~sK~  236 (530)
                      ++++++|+||||++...             +.++.+++++|+++| ++|||+ |+.+...  .+.....+ ...| .+|+
T Consensus        75 ~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           75 ELMKKVDVVISALAFPQ-------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEE--DRINALPPFEALI-ERKR  137 (318)
T ss_dssp             HHHTTCSEEEECCCGGG-------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCT--TTCCCCHHHHHHH-HHHH
T ss_pred             HHHcCCCEEEECCchhh-------------hHHHHHHHHHHHhcCCCCEEEe-eccccCc--ccccCCCCcchhH-HHHH
Confidence            99999999999998532             346799999999998 999985 6554321  11111222 3457 9999


Q ss_pred             HHHHHHHHCCCCEEEEEcCcccCCCccc-----ccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeC
Q 009648          237 KAEEALIASGLPYTIVRPGGMERPTDAY-----KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA  311 (530)
Q Consensus       237 ~~E~~l~~~gl~~tIvRPg~V~Gp~~~~-----~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~  311 (530)
                      .+|+++++.|+++++||||++++.....     .....+.+.........+++++|+|++++.++.++. ..+++|++.+
T Consensus       138 ~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g  216 (318)
T 2r6j_A          138 MIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-ALNRVVIYRP  216 (318)
T ss_dssp             HHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-GTTEEEECCC
T ss_pred             HHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-ccCeEEEecC
Confidence            9999999999999999999987642110     011122222222333467999999999999998875 4578888876


Q ss_pred             C-CCCChhHHHHHHHhcCCCCC
Q 009648          312 E-TTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       312 ~-~~~t~~~i~ell~~v~g~~~  332 (530)
                      . ..+++.++.+++.+++|+..
T Consensus       217 ~~~~~s~~e~~~~~~~~~g~~~  238 (318)
T 2r6j_A          217 STNIITQLELISRWEKKIGKKF  238 (318)
T ss_dssp             GGGEEEHHHHHHHHHHHHTCCC
T ss_pred             CCCccCHHHHHHHHHHHhCCCC
Confidence            4 67899999999999999764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.94  E-value=9.8e-27  Score=253.50  Aligned_cols=221  Identities=15%  Similarity=0.043  Sum_probs=162.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|||||||||||++|++.|+++|++|++++|+..+.                           ..+.+|+.+  .+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------------------~~v~~d~~~--~~~~  197 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------------------GKRFWDPLN--PASD  197 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------------------TCEECCTTS--CCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------------------cceeecccc--hhHH
Confidence            68999999999999999999999999999999987531                           125678865  3467


Q ss_pred             HhCCCcEEEEcccCCCC---ccCCCCcchHhHHHHHHHHHHH-HHhcCCCEEEEEcCCCccCCC------Cccccccchh
Q 009648          160 ALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDA-ATIAKVNHFIMVSSLGTNKFG------FPAAILNLFW  229 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~---~~~~~~~~~~vNv~gt~~Ll~a-a~~~gv~r~V~iSS~~v~~~~------~~~~~~~~~~  229 (530)
                      +++++|+||||||....   ........+++|+.++.+|+++ +++.++++|||+||.+++...      .++... +..
T Consensus       198 ~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~  276 (516)
T 3oh8_A          198 LLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDD  276 (516)
T ss_dssp             TTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSS
T ss_pred             hcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcC
Confidence            78899999999996532   2223345688999999999999 666789999999998874311      111111 455


Q ss_pred             HHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccc--e-----eecccCcccCCCCCHHHHHHHHHHHHhCC
Q 009648          230 GVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHN--I-----TLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       230 ~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~--~-----~~~~~~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                      .|+..|...|+++.   ..|++++|||||+|||+++.......  +     .....+....++||++|+|++++.+++++
T Consensus       277 ~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          277 FLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDA  356 (516)
T ss_dssp             HHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred             hHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence            68888988886643   58999999999999999753211110  0     11111223346799999999999999987


Q ss_pred             CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       300 ~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      .  .+++||++++...++.++.+++.+++|...
T Consensus       357 ~--~~g~~ni~~~~~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          357 Q--ISGPINAVAPNPVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             T--CCEEEEESCSCCEEHHHHHHHTTC------
T ss_pred             c--cCCcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence            6  467999999999899999999988888643

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.94  E-value=9.1e-27  Score=242.00  Aligned_cols=200  Identities=16%  Similarity=0.031  Sum_probs=163.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+|||||||||||++|+++|+++|+ +|++++|+                                      .|.+++.+
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------------~d~~~l~~   42 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------------TKEEELES   42 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------------CCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------------CCHHHHHH
Confidence            5899999999999999999999998 88775552                                      46677888


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCccCCCCccccccchhHHHHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~  238 (530)
                      +++++|+||||||....  .+....+++|+.++.+|+++|++++++ +|||+||.++..          ...|+.+|+++
T Consensus        43 ~~~~~d~Vih~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------~~~Y~~sK~~~  110 (369)
T 3st7_A           43 ALLKADFIVHLAGVNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------DNPYGESKLQG  110 (369)
T ss_dssp             HHHHCSEEEECCCSBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------CSHHHHHHHHH
T ss_pred             HhccCCEEEECCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------CCCchHHHHHH
Confidence            88899999999996543  355667889999999999999999987 999999988743          35799999999


Q ss_pred             HHHHHH----CCCCEEEEEcCcccCCCccccc-------------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCC
Q 009648          239 EEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (530)
Q Consensus       239 E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-------------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~  301 (530)
                      |+++++    .|++++++||+++||++.....             ...+.+. .......+++++|+|++++.+++++..
T Consensus       111 E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~  189 (369)
T 3st7_A          111 EQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPT  189 (369)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence            999976    7999999999999999753211             1111111 122223579999999999999998862


Q ss_pred             CCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       302 ~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ..+++||+.++...++.++.+++.+++|..
T Consensus       190 ~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~  219 (369)
T 3st7_A          190 IENGVPTVPNVFKVTLGEIVDLLYKFKQSR  219 (369)
T ss_dssp             EETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred             cCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence            228999999999899999999999998765

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.93  E-value=2.4e-25  Score=221.56  Aligned_cols=224  Identities=16%  Similarity=0.133  Sum_probs=168.9

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        75 ~~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      |....+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.         +   ..++.++.+|++|.
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~Dv~~~   72 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL---------G---SGKVIGVQTDVSDR   72 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------S---SSCEEEEECCTTSH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------C---CCcEEEEEcCCCCH
Confidence            34567899999999999999999999999999999999998887776655432         1   25799999999999


Q ss_pred             hhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccC
Q 009648          155 VQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNK  217 (530)
Q Consensus       155 ~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~  217 (530)
                      ++++++++       ++|+||||||....      +..++...+++|+.++.++++++...    +.++||++||.....
T Consensus        73 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~  152 (262)
T 3pk0_A           73 AQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI  152 (262)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc
Confidence            88877764       89999999996532      22234566899999999988887654    778999999986532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .+     ......|+.+|++.+.+++.       .|+++++|+||+|+++...................+.+.+.+|||+
T Consensus       153 ~~-----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~  227 (262)
T 3pk0_A          153 TG-----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGH  227 (262)
T ss_dssp             BC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             CC-----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            22     23456799999999988763       6999999999999987432111000101111223345689999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      ++++++.+. .+..|++++|.++...
T Consensus       228 ~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          228 LAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCcCCEEEECCCeec
Confidence            999999765 3356999999988654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.93  E-value=2.9e-25  Score=222.09  Aligned_cols=228  Identities=18%  Similarity=0.171  Sum_probs=171.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++...+.+.+                ..++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   72 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----------------GRGAVHHVVDLTNEVSV   72 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----------------CTTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------CCCeEEEECCCCCHHHH
Confidence            56789999999999999999999999999999999998877665432                15788999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       ++|+||||||....        +..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        73 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  152 (271)
T 3tzq_B           73 RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA  152 (271)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC
Confidence            87774       79999999996522        22234567999999999999988    5667789999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|+++......... ..........+.+.+.+|+|+
T Consensus       153 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~  226 (271)
T 3tzq_B          153 ------YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAE  226 (271)
T ss_dssp             ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             ------CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  23456899999999988762       6899999999999998643111110 111112233345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHhc
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKI  327 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~v  327 (530)
                      ++++++.+. .+..|+++++.++.......+.++....
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~  264 (271)
T 3tzq_B          227 LVCFLASDRAAFITGQVIAADSGLLAHLPGLPQIRASV  264 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHHH
T ss_pred             HHHHHhCcccCCcCCCEEEECCCccccCCCccccCCcc
Confidence            999999865 3356999999998433334455554443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.93  E-value=6.1e-26  Score=227.29  Aligned_cols=225  Identities=13%  Similarity=0.118  Sum_probs=163.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+||||++++++|+++|++|++++|+.++...+.+.+                ..+++++.+|++|.+++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~~   66 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----------------PDRAEAISLDVTDGERI   66 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----------------TTTEEEEECCTTCHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCCceEEEeeCCCHHHH
Confidence            35689999999999999999999999999999999998877654321                25799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHH----HHHHHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~g----t~~Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      ...++...+++|+.+    ++.+++.+++.+.++||++||......  
T Consensus        67 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--  144 (281)
T 3m1a_A           67 DVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS--  144 (281)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC--
Confidence            87774       78999999996422      222345678999999    555555567778889999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc---ccee-----e-----cccCcccC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET---HNIT-----L-----SQEDTLFG  280 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~---~~~~-----~-----~~~~~~~~  280 (530)
                          ..+...|+.+|+++|.+++.       .|+++++||||+|+++.......   ....     .     ........
T Consensus       145 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (281)
T 3m1a_A          145 ----FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGS  220 (281)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC----
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCC
Confidence                33457899999999988752       69999999999998874321100   0000     0     00011223


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHh
Q 009648          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK  326 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~  326 (530)
                      .+++++|+|++++++++++.  .+..|+++++....+......+.+
T Consensus       221 ~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~~~~~i~g~~~~i~~  264 (281)
T 3m1a_A          221 QPGDPAKAAAAIRLALDTEK--TPLRLALGGDAVDFLTGHLDSVRA  264 (281)
T ss_dssp             -CBCHHHHHHHHHHHHHSSS--CCSEEEESHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhCCC--CCeEEecCchHHHHHHHHHHHHHH
Confidence            46899999999999999876  478899988765444444444443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.93  E-value=1.6e-25  Score=222.17  Aligned_cols=216  Identities=13%  Similarity=0.089  Sum_probs=163.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.+++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~v   69 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----------------GPAAYAVQMDVTRQDSI   69 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCCceEEEeeCCCHHHH
Confidence            56789999999999999999999999999999999988776655432                15689999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++...    + .++||++||...... 
T Consensus        70 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  148 (259)
T 4e6p_A           70 DAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRG-  148 (259)
T ss_dssp             HHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccC-
Confidence            87775       89999999996432      22334566889999999999887643    2 469999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g  281 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|+++.....           ..............+.
T Consensus       149 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  223 (259)
T 4e6p_A          149 -----EALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGR  223 (259)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCC
Confidence                 23356799999999988763       589999999999999853221           0000011111233456


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +++++|||+++++++.+.. +..|++|+|.++...
T Consensus       224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence            7899999999999987543 346899999998653

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.93  E-value=3.5e-25  Score=219.28  Aligned_cols=215  Identities=13%  Similarity=0.114  Sum_probs=155.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++                ..++.++.+|++|.+++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   68 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------------GAAVRFRNADVTNEADA   68 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------------CEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------------CCceEEEEccCCCHHHH
Confidence            56789999999999999999999999999999999988766544321                14689999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc----------CCCEEEEE
Q 009648          158 EPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHFIMV  210 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------gv~r~V~i  210 (530)
                      .++++       ++|+||||||....          +..++...+++|+.++.++++++...          +.++||++
T Consensus        69 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~i  148 (257)
T 3tpc_A           69 TAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNT  148 (257)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEE
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEE
Confidence            87774       89999999996532          12335567899999999999998753          45689999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCccc-CCC
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQ  282 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~-~g~  282 (530)
                      ||......      ......|+.+|++.+.+.+.       .|+++++|+||+|.++................... +.+
T Consensus       149 sS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~  222 (257)
T 3tpc_A          149 ASIAAFDG------QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRL  222 (257)
T ss_dssp             CCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSC
T ss_pred             echhhccC------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCC
Confidence            99865332      22456799999999877652       68999999999999875322111111111111222 457


Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      .+.+|+|+++++++.+. +..|+++++.++...
T Consensus       223 ~~~~dva~~v~~l~s~~-~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          223 GRAEEYAALVKHICENT-MLNGEVIRLDGALRM  254 (257)
T ss_dssp             BCHHHHHHHHHHHHHCT-TCCSCEEEESTTCCC
T ss_pred             CCHHHHHHHHHHHcccC-CcCCcEEEECCCccC
Confidence            89999999999999874 467999999988643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=2.3e-25  Score=219.43  Aligned_cols=217  Identities=13%  Similarity=0.106  Sum_probs=162.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+ .++.+.+.+.+...             ..++.++.+|++|.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~   68 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK-------------GVDSFAIQANVADADE   68 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TSCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            457899999999999999999999999999998885 45666655554432             2578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||...... 
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (246)
T 3osu_A           69 VKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG-  147 (246)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-
Confidence            887774       79999999996532      22234567999999999999988    5567789999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+       ..|+++++|+||+|+++...................+.+.+.+|||+++
T Consensus       148 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v  222 (246)
T 3osu_A          148 -----NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTV  222 (246)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 2345679999999988765       2689999999999998753321111111111122334567899999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++.+.. ...|++|++.++.
T Consensus       223 ~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          223 AFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            99997653 3458999998874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.93  E-value=8.4e-26  Score=226.80  Aligned_cols=239  Identities=16%  Similarity=0.143  Sum_probs=180.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.         + ....++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~-~~~~~~~~~~~Dv~~~~~v   78 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL---------G-ANGGAIRYEPTDITNEDET   78 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------C-CSSCEEEEEECCTTSHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------C-CCCceEEEEeCCCCCHHHH
Confidence            56789999999999999999999999999999999998888777666543         1 1123789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCC-------CccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~-------~~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||...       .+..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  157 (281)
T 3svt_A           79 ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNT-  157 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCC-
Confidence            77763       7899999999621       12223456789999999999888764    45569999999865332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-c-eeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||+|+++........ . ..........+.+.+++|||+
T Consensus       158 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (281)
T 3svt_A          158 -----HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN  232 (281)
T ss_dssp             -----CTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 23356799999999988762       679999999999998753221000 0 000111223345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCCCC-hhHHHHHHHhcCCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETTAP-LTPMEELLAKIPSQRA  332 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~~t-~~~i~ell~~v~g~~~  332 (530)
                      ++++++.+.. +..|++|++.++.... ..++.+++.++++...
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence            9999998653 3469999999987765 6788999999888653

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=7.5e-25  Score=216.06  Aligned_cols=219  Identities=17%  Similarity=0.136  Sum_probs=163.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++||||||+|+||++++++|+++|++|++++|+.++...+.+.++..             ..+++++.+|+.|.+++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   77 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME-------------GHDVSSVVMDVTNTESV   77 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEecCCCHHHH
Confidence            46789999999999999999999999999999999988776665554432             25789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||... .      +..++...+++|+.++.++++++..    .+.++||++||.......
T Consensus        78 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  157 (260)
T 3awd_A           78 QNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN  157 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC
Confidence            87774       7999999999643 1      1112355689999999999988764    467899999998653321


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcc-cccccce-eecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~-~~~~~~~-~~~~~~~~~~g~V~v~DVA~  290 (530)
                          ...+...|+.+|++.|.+++.       .|+++++||||+|+++... ......+ .........+.+++++|+|+
T Consensus       158 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  233 (260)
T 3awd_A          158 ----RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVAS  233 (260)
T ss_dssp             ----SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHH
T ss_pred             ----CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHH
Confidence                112236799999999988763       6899999999999998654 1110000 00001122345789999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++++.+. ....|++|++.++.
T Consensus       234 ~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          234 VVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhccCCCcEEEECCce
Confidence            999999764 23468899998875

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=3.5e-25  Score=218.94  Aligned_cols=226  Identities=20%  Similarity=0.124  Sum_probs=158.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...   +.   .......++.++.+|+.|.+++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~D~~~~~~~   78 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP---GS---KEGPPRGNHAAFQADVSEARAA   78 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------------CCEEEECCTTSHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---Cc---cccccCcceEEEEecCCCHHHH
Confidence            45689999999999999999999999999999999987766654432211   00   0000114688999999999888


Q ss_pred             HHHhC-------CC-cEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCC
Q 009648          158 EPALG-------NA-SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~v-D~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~  218 (530)
                      .++++       ++ |+||||||....      +..++...+++|+.++.++++++...    + .++||++||......
T Consensus        79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           79 RCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            77774       34 999999996532      22234567899999999999987653    4 579999999754221


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ..+...|+.+|++++.+++.       .|+++++||||+++++...................+.+++++|+|++
T Consensus       159 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (264)
T 2pd6_A          159 ------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADV  232 (264)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHH
T ss_pred             ------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence                  23456799999998877652       68999999999999986432111000000111122456899999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      +++++.+. ....|++|++.++...
T Consensus       233 ~~~l~~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          233 VAFLASEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             HHHHcCCcccCCCCCEEEECCCcee
Confidence            99999764 3356899999988653

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.93  E-value=3.1e-25  Score=217.06  Aligned_cols=218  Identities=16%  Similarity=0.093  Sum_probs=160.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...            ...++.++.+|+.|.+++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~   72 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK------------YGVKAHGVEMNLLSEESI   72 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------HCCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh------------cCCceEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999988777665544331            014789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      ...++...+++|+.++.+++++    +++.+.++||++||......  
T Consensus        73 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--  150 (248)
T 2pnf_A           73 NKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--  150 (248)
T ss_dssp             HHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC--
Confidence            88775       89999999996532      1223456789999999766665    44567789999999754221  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+++++...................+.+++++|+|++++
T Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  226 (248)
T 2pnf_A          151 ----NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVL  226 (248)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence                12346799999999887652       5899999999999987543211000000011122345789999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++.+. ....|++|++.++.
T Consensus       227 ~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          227 FLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCchhhcCCCcEEEeCCCc
Confidence            999764 23458999998763

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.93  E-value=6.1e-25  Score=215.06  Aligned_cols=217  Identities=12%  Similarity=0.093  Sum_probs=152.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||++++++|+++|++|+++ .|+..+.+.+.+.+...             ..++.++.+|+.|.++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   69 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA-------------GINVVVAKGDVKNPED   69 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT-------------TCCEEEEESCTTSHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence            456899999999999999999999999999999 57776666655544332             2578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||..... +
T Consensus        70 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-~  148 (247)
T 2hq1_A           70 VENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII-G  148 (247)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc-C
Confidence            887775       79999999996432      334566779999999888887765    35778999999975422 1


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.|.+++.       .|+++++||||++.++...................+.+++++|+|+++
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (247)
T 2hq1_A          149 -----NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVV  223 (247)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred             -----CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence                 12346799999999988763       589999999999987632111000000001112234578999999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++.++ ....|++|++.++.
T Consensus       224 ~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          224 GFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCcccccccCcEEEeCCCc
Confidence            9999764 23468899998874

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.93  E-value=4e-25  Score=219.40  Aligned_cols=220  Identities=13%  Similarity=0.064  Sum_probs=164.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...        .    ..++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~----~~~~~~~~~D~~~~~~~   72 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK--------F----GVRVLEVAVDVATPEGV   72 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------H----CCCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--------c----CCceEEEEcCCCCHHHH
Confidence            45789999999999999999999999999999999988777665544321        0    14689999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||..+...  
T Consensus        73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  150 (263)
T 3ai3_A           73 DAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP--  150 (263)
T ss_dssp             HHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC--
Confidence            87774       79999999996432      222345678999999998888865    457789999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc----------cce-eecccC-cccCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----------HNI-TLSQED-TLFGG  281 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~----------~~~-~~~~~~-~~~~g  281 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+|+++.......          ... ...... ...+.
T Consensus       151 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  226 (263)
T 3ai3_A          151 ----LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR  226 (263)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCS
T ss_pred             ----CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCC
Confidence                23356799999999987753       68999999999999975321100          000 000001 22345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +++++|||+++++++.++. ...|++|++.++...
T Consensus       227 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          227 FASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            7899999999999997653 346899999988654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.93  E-value=5e-25  Score=223.45  Aligned_cols=224  Identities=15%  Similarity=0.108  Sum_probs=167.9

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        75 ~~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +....+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.            ...++.++.+|+.|.
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~  103 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL------------GAGNVIGVRLDVSDP  103 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS------------SSSCEEEEECCTTCH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh------------CCCcEEEEEEeCCCH
Confidence            34467889999999999999999999999999999999998888776654322            125799999999999


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccC
Q 009648          155 VQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~  217 (530)
                      +++++++       +++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||.....
T Consensus       104 ~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~  183 (293)
T 3rih_A          104 GSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV  183 (293)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc
Confidence            8877665       478999999996532      22234567899999999999887    456778999999986532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .+     ......|+.+|++++.+.+.       .|+++++|+||+|+++...................+.+...+|||+
T Consensus       184 ~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~  258 (293)
T 3rih_A          184 TG-----YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGH  258 (293)
T ss_dssp             BB-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             CC-----CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            22     23456899999999988762       6999999999999987432111000000111223345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      ++++++.+. .+..|++|+|.++...
T Consensus       259 ~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          259 LAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHhCccccCCCCCEEEECCCccC
Confidence            999999764 3356999999988653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.93  E-value=8.1e-25  Score=216.98  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=151.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+.+|+||||||+|+||+++++.|+++|++|++++|+.++...+.+.+...             ..++.++.+|+.|.++
T Consensus        11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   77 (266)
T 1xq1_A           11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-------------GFQVTGSVCDASLRPE   77 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeeEEEECCCCCHHH
Confidence            356789999999999999999999999999999999988777665554432             2478999999999988


Q ss_pred             HHHHh--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++        +++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||..+...
T Consensus        78 ~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  157 (266)
T 1xq1_A           78 REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS  157 (266)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred             HHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC
Confidence            88777        578999999996432      22234556899999999999888    4567889999999866322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|+.+|++.+.+++.       .|+++++||||+|+++........... ........+.+++++|+|+
T Consensus       158 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  231 (266)
T 1xq1_A          158 ------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSS  231 (266)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHH
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                  22346799999999988763       599999999999999854321100000 0001112235689999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++++.+. ....|++|++.++..
T Consensus       232 ~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          232 LVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             HHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             HHHHHcCccccCccCcEEEEcCCcc
Confidence            999999754 234688999988753

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.93  E-value=1.1e-24  Score=214.16  Aligned_cols=217  Identities=17%  Similarity=0.144  Sum_probs=159.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.+
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~   73 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----------------KDNYTIEVCNLANKE   73 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CSSEEEEECCTTSHH
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------ccCccEEEcCCCCHH
Confidence            3567899999999999999999999999999999999988777665432                157899999999999


Q ss_pred             hHHHHhC---CCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          156 QIEPALG---NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       156 sl~~a~~---~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++.++++   ++|+||||||...      ....++...+++|+.++.++++++.    +.+.++||++||......    
T Consensus        74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----  149 (249)
T 3f9i_A           74 ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAG----  149 (249)
T ss_dssp             HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--C----
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccC----
Confidence            9988885   6899999999643      2334566779999999999888764    456679999999866432    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|+.+|++.+.+++.       .|+++++|+||+|.++...................+.+++++|+|++++++
T Consensus       150 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  227 (249)
T 3f9i_A          150 --NPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFL  227 (249)
T ss_dssp             --CSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              23456799999998877652       689999999999998753221111111111122345678899999999999


Q ss_pred             HhCCC-CCCCcEEEEeCCCC
Q 009648          296 AKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       296 l~~~~-~~~g~vynv~~~~~  314 (530)
                      +.+.. ...|++|++.++..
T Consensus       228 ~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          228 ASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HSGGGTTCCSCEEEESTTSS
T ss_pred             cCCccCCccCcEEEECCCEe
Confidence            98653 34689999988753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-24  Score=213.26  Aligned_cols=218  Identities=12%  Similarity=0.065  Sum_probs=166.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+++.             ..++.++.+|+.|.+++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   69 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-------------GFKARGLVLNISDIESI   69 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999998888777665543             25799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||......  
T Consensus        70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  147 (247)
T 3lyl_A           70 QNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG--  147 (247)
T ss_dssp             HHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--
Confidence            87763       58999999996532      2233456789999999998888653    46679999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+++.       .|+++++|+||+|.++...................+.+.+++|+|++++
T Consensus       148 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~  223 (247)
T 3lyl_A          148 ----NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVA  223 (247)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence                23456799999998877652       6899999999999987543211111111112233446789999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++.+.. ...|++|++.++..
T Consensus       224 ~l~s~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          224 FLASEEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHhCCCcCCccCCEEEECCCEe
Confidence            9997643 34699999988854

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.93  E-value=1.3e-24  Score=217.96  Aligned_cols=220  Identities=16%  Similarity=0.135  Sum_probs=163.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------------chhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ....+|+||||||+|+||+++++.|+++|++|++++|+            .+....+.+.+...             ..+
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~   72 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT-------------GRR   72 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc-------------CCe
Confidence            34678999999999999999999999999999999997            33344433333322             257


Q ss_pred             eEEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCE
Q 009648          144 LELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNH  206 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r  206 (530)
                      +.++.+|++|.++++++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++
T Consensus        73 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~  152 (281)
T 3s55_A           73 CISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGR  152 (281)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999988877764       79999999996532      22334567899999999999885    3456779


Q ss_pred             EEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc---cc--ce---e
Q 009648          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---TH--NI---T  271 (530)
Q Consensus       207 ~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~---~~--~~---~  271 (530)
                      ||++||......      ......|+.+|++.+.+.+.       .|+++++|+||+|+++......   ..  .+   .
T Consensus       153 iv~isS~~~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  226 (281)
T 3s55_A          153 IVTVSSMLGHSA------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPT  226 (281)
T ss_dssp             EEEECCGGGGSC------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CC
T ss_pred             EEEECChhhcCC------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccc
Confidence            999999866432      23456799999999987762       5899999999999998643210   00  00   0


Q ss_pred             -------ecccCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          272 -------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       272 -------~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                             +.......+.+++++|||+++++++.+.. ...|++|+|.++..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          227 LKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             HHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence                   00111222567899999999999998753 34689999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.93  E-value=1.1e-24  Score=214.45  Aligned_cols=217  Identities=11%  Similarity=0.072  Sum_probs=159.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++| +.++.+.+.+++...             ..++.++.+|+.|.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   68 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL-------------GSDAIAVRADVANAED   68 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHH
Confidence            35689999999999999999999999999999999 777776665554432             2578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||...... 
T Consensus        69 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (246)
T 2uvd_A           69 VTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG-  147 (246)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC-
Confidence            887764       79999999996532      22234567899999977766665    4557789999999865322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+       ..|+++++|+||+|.++...................+.+++++|+|+++
T Consensus       148 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~  222 (246)
T 2uvd_A          148 -----NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV  222 (246)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 1235679999999887765       2689999999999987643211000000000111234578999999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++.+. .+..|++|++.++.
T Consensus       223 ~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          223 TFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHcCchhcCCCCCEEEECcCc
Confidence            9999764 33468899988874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.93  E-value=6.2e-25  Score=217.71  Aligned_cols=220  Identities=13%  Similarity=0.081  Sum_probs=164.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.+++
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~   78 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE-------------GLSVTGTVCHVGKAEDR   78 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999988777665554432             25788999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....       +..++...+++|+.++.++++++.    +.+.++||++||..+... 
T Consensus        79 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  157 (260)
T 2zat_A           79 ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP-  157 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-
Confidence            77664       89999999996421       122345678999999988888864    567789999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-c-eeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||+|.++........ . ..........+.+++++|||+
T Consensus       158 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  232 (260)
T 2zat_A          158 -----FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAG  232 (260)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence                 23456799999999988763       589999999999998753211000 0 000011112345789999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETTAP  316 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~~t  316 (530)
                      ++++++.++. +..|++|++.++...+
T Consensus       233 ~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          233 IVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             HHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHcCcccCCccCCEEEECCCcccc
Confidence            9999997653 3468999999987543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.92  E-value=1e-24  Score=216.36  Aligned_cols=221  Identities=15%  Similarity=0.141  Sum_probs=168.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.++
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~   75 (256)
T 3gaf_A            9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA-------------GGKAIGLECNVTDEQH   75 (256)
T ss_dssp             CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence            456789999999999999999999999999999999998888777666543             2679999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-----ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-----~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++++       ++|+||||||....     +..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        76 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  153 (256)
T 3gaf_A           76 REAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT--  153 (256)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC--
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC--
Confidence            877764       79999999996533     223345679999999999998864    456679999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|++.+.+.+.       .|++++.|+||+|.++......... ..........+.+.+++|||+++
T Consensus       154 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~  229 (256)
T 3gaf_A          154 ----NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA  229 (256)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                23456899999999988762       5899999999999886422110000 00111123345578999999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETTAP  316 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~~t  316 (530)
                      ++++.+. .+..|++|++.++...+
T Consensus       230 ~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          230 LFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             HHHcCCcccCccCCEEEECCCcccc
Confidence            9999764 33569999999987543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=1.1e-24  Score=215.45  Aligned_cols=216  Identities=13%  Similarity=0.100  Sum_probs=160.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+                ..++.++.+|+.|.++
T Consensus         9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   72 (265)
T 2o23_A            9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----------------GNNCVFAPADVTSEKD   72 (265)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----------------CTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----------------CCceEEEEcCCCCHHH
Confidence            356789999999999999999999999999999999988776654322                1478999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------------ccCCCCcchHhHHHHHHHHHHHHHhc----------CCCEE
Q 009648          157 IEPALG-------NASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHF  207 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------gv~r~  207 (530)
                      +.++++       ++|+||||||....            ...++...+++|+.++.++++++...          +.++|
T Consensus        73 v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  152 (265)
T 2o23_A           73 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVI  152 (265)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred             HHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEE
Confidence            888775       89999999996432            12234567899999999999998754          56799


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCccc-
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-  279 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~-  279 (530)
                      |++||......      ......|+.+|++.+.+++.       .|+++++|+||+|.++................... 
T Consensus       153 v~isS~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  226 (265)
T 2o23_A          153 INTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP  226 (265)
T ss_dssp             EEECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred             EEeCChhhcCC------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCc
Confidence            99999865322      22356799999998877652       58999999999999875322110000000011112 


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +.+++++|+|+++++++.+.. ..|+++++.++...
T Consensus       227 ~~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG~~~  261 (265)
T 2o23_A          227 SRLGDPAEYAHLVQAIIENPF-LNGEVIRLDGAIRM  261 (265)
T ss_dssp             CSCBCHHHHHHHHHHHHHCTT-CCSCEEEESTTCCC
T ss_pred             CCCCCHHHHHHHHHHHhhcCc-cCceEEEECCCEec
Confidence            456899999999999998654 57899999887543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.92  E-value=1.9e-24  Score=214.27  Aligned_cols=220  Identities=13%  Similarity=0.094  Sum_probs=164.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.+.             ..++.++.+|++|.+++
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   70 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-------------PGQILTVQMDVRNTDDI   70 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-------------TTCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            56789999999999999999999999999999999998877766544321             25799999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH-----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~-----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++.     +.+.++||++||...... 
T Consensus        71 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  149 (257)
T 3imf_A           71 QKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA-  149 (257)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC-
Confidence            77764       78999999995422      223355679999999999998873     345679999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCccccc--ccce-eecccCcccCCCCCHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKE--THNI-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~~~~~--~~~~-~~~~~~~~~~g~V~v~DV  288 (530)
                           ......|+.+|++.+.+.+        ..|+++++|+||+|+++......  .... .........+.+.+++|+
T Consensus       150 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  224 (257)
T 3imf_A          150 -----GPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEI  224 (257)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHH
Confidence                 2345679999999887764        24899999999999987532210  0000 000112223456899999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCCCCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAETTAP  316 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~~~t  316 (530)
                      |+++++++.+.. +..|+++++.++....
T Consensus       225 A~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          225 AGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            999999997653 3469999999986543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=5.6e-25  Score=218.36  Aligned_cols=217  Identities=14%  Similarity=0.115  Sum_probs=162.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+|+||||||+|+||++++++|+++|++|++++| +..+.+.+.+.+...             ..++.++.+|+.|.++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   85 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-------------GAQGVAIQADISKPSE   85 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence            45789999999999999999999999999999999 666666655544432             2578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++...   + ++||++||..+...+ 
T Consensus        86 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~-  163 (274)
T 1ja9_A           86 VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG-  163 (274)
T ss_dssp             HHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC-
Confidence            888775       89999999996532      12223567899999999999998765   5 699999998764111 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc---------cc---ce-eecccCcccC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---------TH---NI-TLSQEDTLFG  280 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~---------~~---~~-~~~~~~~~~~  280 (530)
                          ......|+.+|+++|.+++.       .|+++++||||+++++......         ..   .. .........+
T Consensus       164 ----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (274)
T 1ja9_A          164 ----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  239 (274)
T ss_dssp             ----CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCC
Confidence                22356799999999988763       4899999999999886432100         00   00 0001112234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+++++|+|+++++++.++. ...|++|++.++.
T Consensus       240 ~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          240 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            67899999999999997643 2368899998863

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=1.8e-24  Score=215.02  Aligned_cols=210  Identities=18%  Similarity=0.192  Sum_probs=158.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.                .++.++.+|+.|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v   68 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW   68 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------------cCceEEEecCCCHHHH
Confidence            457899999999999999999999999999999999877665443211                2478899999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.+++++    +++.+.++||++||......  
T Consensus        69 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  146 (260)
T 1nff_A           69 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG--  146 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC--
Confidence            88775       89999999996432      1223456789999999666555    45567789999999876332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+|+++...... ..+.    ....+.+++++|+|++++
T Consensus       147 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~----~~~~~~~~~~~dvA~~v~  217 (260)
T 1nff_A          147 ----TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-EDIF----QTALGRAAEPVEVSNLVV  217 (260)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-TTCS----CCSSSSCBCHHHHHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccch-hhHH----hCccCCCCCHHHHHHHHH
Confidence                12346799999999987753       6999999999999988543110 0110    112345689999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++.+.. ...|++|++.++..
T Consensus       218 ~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          218 YLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhCccccCCcCCEEEECCCee
Confidence            9997642 24588999998853

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.92  E-value=1.6e-24  Score=211.88  Aligned_cols=213  Identities=16%  Similarity=0.113  Sum_probs=159.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.   .              .+++++.+|+.|.+++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~--------------~~~~~~~~D~~~~~~~   67 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE---C--------------PGIEPVCVDLGDWEAT   67 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S--------------TTCEEEECCTTCHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---c--------------CCCCEEEEeCCCHHHH
Confidence            4578999999999999999999999999999999998766554321   1              3567789999999999


Q ss_pred             HHHhC---CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCCCccc
Q 009648          158 EPALG---NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       158 ~~a~~---~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~~~~~  223 (530)
                      .++++   ++|+||||||.....      ..++...+++|+.++.++++++..    .+ .++||++||......     
T Consensus        68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  142 (244)
T 3d3w_A           68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----  142 (244)
T ss_dssp             HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----
T ss_pred             HHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----
Confidence            98885   589999999964321      123456789999999998888765    35 679999999866332     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                       ......|+.+|+++|.+++.       .|+++++||||+|+++....... ... .........+.+++++|+|+++++
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 3d3w_A          143 -VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF  221 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence             23456899999999988763       58999999999999986431100 000 000111223467899999999999


Q ss_pred             HHhCCC-CCCCcEEEEeCCC
Q 009648          295 MAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.+.. ...|++|++.++.
T Consensus       222 l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          222 LLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HcCccccCCCCCEEEECCCc
Confidence            997642 3468899998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.92  E-value=1.5e-24  Score=215.16  Aligned_cols=218  Identities=16%  Similarity=0.127  Sum_probs=163.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|++|.+++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   73 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-------------GFKVEASVCDLSSRSER   73 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            46789999999999999999999999999999999988777665554432             14688999999999888


Q ss_pred             HHHh--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++        +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        74 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  152 (260)
T 2ae2_A           74 QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-  152 (260)
T ss_dssp             HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-
Confidence            8777        579999999996432      222345678999999999988874    457789999999865332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccce-e---ecccCcccCCCCCHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-T---LSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~-~---~~~~~~~~~g~V~v~D  287 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||++.++...... .... .   ........+.+++++|
T Consensus       153 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  227 (260)
T 2ae2_A          153 -----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE  227 (260)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHH
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHH
Confidence                 23356799999999988763       4899999999999886321100 0000 0   0011122345789999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +|+++++++.+. ....|+++++.++..
T Consensus       228 vA~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (260)
T 2ae2_A          228 LAAMVAFLCFPAASYVTGQIIYVDGGLM  255 (260)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999764 234689999988753

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.92  E-value=3.7e-25  Score=223.48  Aligned_cols=234  Identities=13%  Similarity=0.123  Sum_probs=167.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+.++...+.+.+...            ...++.++.+|+.|.++
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~~~   90 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ------------TGNKVHAIQCDVRDPDM   90 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------------HSSCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------------cCCceEEEEeCCCCHHH
Confidence            356789999999999999999999999999999999988777665554432            01578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~  218 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++..     .+.++||++||..+...
T Consensus        91 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  170 (302)
T 1w6u_A           91 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  170 (302)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence            877764       56999999995422      2223456789999999999888753     34579999999865322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcc--cccccce-eecccCcccCCCCCHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA--YKETHNI-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~--~~~~~~~-~~~~~~~~~~g~V~v~DV  288 (530)
                            ..+...|+.+|++.+.+++.       .|+++++||||+|++++..  ....... .........+.+++++|+
T Consensus       171 ------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv  244 (302)
T 1w6u_A          171 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL  244 (302)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred             ------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHH
Confidence                  23456799999999988753       6899999999999987321  1111000 000111223456899999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIP  328 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~  328 (530)
                      |+++++++.+.. ...|++|++.++...++.++.+.+.++.
T Consensus       245 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          245 ANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             HHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            999999997543 2368899999987654445444444443

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.92  E-value=1.1e-24  Score=215.04  Aligned_cols=215  Identities=14%  Similarity=0.096  Sum_probs=162.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.                .++.++.+|++|.++
T Consensus         6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~   69 (248)
T 3op4_A            6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------------DNGKGMALNVTNPES   69 (248)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceEEEEeCCCHHH
Confidence            4567899999999999999999999999999999999887776654332                356889999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        70 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-  148 (248)
T 3op4_A           70 IEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-  148 (248)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-
Confidence            887774       79999999996532      2234566799999999999888753    56679999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++...................+.+.+++|||+++
T Consensus       149 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v  223 (248)
T 3op4_A          149 -----NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAV  223 (248)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 23456799999998877652       689999999999988753221111111111122334568999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++.+.. +..|+++++.++.
T Consensus       224 ~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          224 AFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHcCCccCCccCcEEEECCCe
Confidence            99997653 3468999998875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.92  E-value=2e-24  Score=211.80  Aligned_cols=216  Identities=15%  Similarity=0.110  Sum_probs=159.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.+            ....++.++.+|+.|.+++.+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~~~~~   69 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH------------AYADKVLRVRADVADEGDVNA   69 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST------------TTGGGEEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------------hcCCcEEEEEecCCCHHHHHH
Confidence            57899999999999999999999999999999998777665543310            012468999999999998888


Q ss_pred             HhC-------CCcEEEEcccCCCCc---------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          160 ALG-------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~~---------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++       ++|+||||||.....         ..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        70 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-  148 (250)
T 2cfc_A           70 AIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-  148 (250)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-
Confidence            775       899999999964322         12345668899999877666654    457789999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccc-cccccee-ecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~-~~~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+++.       .|+++++||||+|+++.... .....+. ........+.+++.+|+|+
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  223 (250)
T 2cfc_A          149 -----FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVAD  223 (250)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 23456799999999988763       49999999999999986432 1100000 0001122345689999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++++.++. ...|++|++.++.
T Consensus       224 ~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          224 AVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             HHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HHHHHcCchhhcccCCEEEECCce
Confidence            9999998753 2458899988764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.92  E-value=2.9e-24  Score=213.05  Aligned_cols=219  Identities=14%  Similarity=0.133  Sum_probs=160.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...           ....++.++.+|++|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~v   73 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL-----------VSGAQVDIVAGDIREPGDI   73 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------STTCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----------CCCCeEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999988777665544321           0013789999999999998


Q ss_pred             HHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++      ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||..+...   
T Consensus        74 ~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  150 (260)
T 2z1n_A           74 DRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP---  150 (260)
T ss_dssp             HHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC---
Confidence            88875      59999999996432      22234567899999987666655    4567789999999876432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccc----------ccccc-eeecccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY----------KETHN-ITLSQEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~----------~~~~~-~~~~~~~~~~~g~V  283 (530)
                         ......|+.+|++.+.+.+.       .|+++++||||+|+++....          ..... ..........+.++
T Consensus       151 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  227 (260)
T 2z1n_A          151 ---WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG  227 (260)
T ss_dssp             ---CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCC
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCcc
Confidence               22356799999999887652       58999999999999875331          00000 00001112234567


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|+|+++++++.+. ....|+++++.++.
T Consensus       228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          228 KPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999999999764 33468899988874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.92  E-value=1.7e-24  Score=214.32  Aligned_cols=215  Identities=13%  Similarity=0.036  Sum_probs=158.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++                ..++.++.+|++|.+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~   66 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------------GDAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------GGGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceeEEEecCCCHHHH
Confidence            45789999999999999999999999999999999987666543311                14688999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHH----HHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~L----l~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++    ++.+++.+.++||++||......  
T Consensus        67 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  144 (254)
T 1hdc_A           67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG--  144 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC--
Confidence            87775       89999999996432      2223456789999998754    45555667789999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCC-CHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV-SNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V-~v~DVA~ai  292 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+|+++...................+.+. +++|+|+++
T Consensus       145 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v  220 (254)
T 1hdc_A          145 ----LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence                23356799999999987653       589999999999998743211000000000111223467 999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++.+.. +..|+++++.++..
T Consensus       221 ~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          221 VKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCchhcCCCCCEEEECCCcc
Confidence            99997652 34689999988854

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.92  E-value=9.2e-25  Score=213.38  Aligned_cols=213  Identities=16%  Similarity=0.073  Sum_probs=159.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||++++++|+++|++|++++|+.++...+.+.                 ..+++++.+|+.|.+++
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~D~~~~~~~   67 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-----------------CPGIEPVCVDLGDWDAT   67 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------------STTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----------------ccCCCcEEecCCCHHHH
Confidence            4578999999999999999999999999999999998766554321                 13567889999999999


Q ss_pred             HHHhC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCCCCccc
Q 009648          158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       158 ~~a~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~~~~~~  223 (530)
                      +++++   ++|+||||||....      ...++...+++|+.++.++++++...    + .++||++||..+...     
T Consensus        68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  142 (244)
T 1cyd_A           68 EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----  142 (244)
T ss_dssp             HHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----
T ss_pred             HHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC-----
Confidence            99886   47999999996432      12234567899999999998887653    5 679999999866432     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                       ......|+.+|++.|.+++.       .|+++++||||+++++....... ..+ ...........+++++|+|+++++
T Consensus       143 -~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 1cyd_A          143 -FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF  221 (244)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred             -CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHH
Confidence             22356799999999988763       58999999999999875321100 000 000111223567999999999999


Q ss_pred             HHhCCC-CCCCcEEEEeCCC
Q 009648          295 MAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++.++. ...|+++++.++.
T Consensus       222 l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          222 LLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHSGGGTTCCSSEEEESTTG
T ss_pred             HhCchhhcccCCEEEECCCc
Confidence            997653 3458889888774

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=1e-25  Score=220.63  Aligned_cols=206  Identities=15%  Similarity=0.158  Sum_probs=154.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|++++|+.++..                       .   .+.+|+.|.++++++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------------~---~~~~D~~~~~~~~~~   55 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------------A---DLSTPGGRETAVAAV   55 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C---CTTSHHHHHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------------------c---cccCCcccHHHHHHH
Confidence            58999999999999999999999999999999875311                       0   155899998888888


Q ss_pred             hC----CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccCCCCcc----------
Q 009648          161 LG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFGFPA----------  222 (530)
Q Consensus       161 ~~----~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~~~~~~----------  222 (530)
                      ++    ++|+||||||.... ..++...+++|+.++.++++++.+.    +.++||++||..+.......          
T Consensus        56 ~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~  134 (255)
T 2dkn_A           56 LDRCGGVLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAG  134 (255)
T ss_dssp             HHHHTTCCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHT
T ss_pred             HHHcCCCccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhccc
Confidence            75    89999999996542 2346678999999999999987654    66899999998774332100          


Q ss_pred             ----------ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce---eecc-cCcccCC
Q 009648          223 ----------AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI---TLSQ-EDTLFGG  281 (530)
Q Consensus       223 ----------~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~---~~~~-~~~~~~g  281 (530)
                                ....+...|+.+|+++|.+++.       .|+++++||||+|+|+..........   .... .. ..+.
T Consensus       135 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~  213 (255)
T 2dkn_A          135 DEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLGR  213 (255)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTSS
T ss_pred             chhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-HhcC
Confidence                      0013567899999999988763       59999999999999975322100000   0000 01 3446


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++++|+|+++++++.++. ...|++|++.++..
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  247 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMD  247 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHH
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeE
Confidence            7999999999999998762 24688999998854

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.92  E-value=2.6e-24  Score=215.11  Aligned_cols=216  Identities=16%  Similarity=0.125  Sum_probs=163.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++| +....+.+.+.+...             ..++.++.+|+.|.+
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~   91 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA-------------GGEAFAVKADVSQES   91 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence            356789999999999999999999999999999998 555566655554432             257899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......
T Consensus        92 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  171 (269)
T 4dmm_A           92 EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMG  171 (269)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC
Confidence            8877764       79999999996532      223456679999999999988864    456789999999765322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+.+.       .|+++++|+||+|.++........   ........+.+.+.+|||++
T Consensus       172 ------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~p~~r~~~~~dvA~~  242 (269)
T 4dmm_A          172 ------NPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAE---KLLEVIPLGRYGEAAEVAGV  242 (269)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHH---HHGGGCTTSSCBCHHHHHHH
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHH---HHHhcCCCCCCCCHHHHHHH
Confidence                  22356799999998877652       689999999999998754321110   01112233456889999999


Q ss_pred             HHHHHhCC--CCCCCcEEEEeCCCC
Q 009648          292 LACMAKNR--SLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~--~~~~g~vynv~~~~~  314 (530)
                      +++++.++  .+..|++|+|.++..
T Consensus       243 v~~l~s~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          243 VRFLAADPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             HHHHHHCGGGGGCCSCEEEESTTSC
T ss_pred             HHHHhCCcccCCCcCCEEEECCCee
Confidence            99999873  234699999988854

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.92  E-value=3.1e-24  Score=213.61  Aligned_cols=220  Identities=13%  Similarity=0.083  Sum_probs=161.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.           ....++.++.+|++|.+++
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~v   79 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-----------APDAEVLTTVADVSDEAQV   79 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTCCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----------cCCceEEEEEccCCCHHHH
Confidence            56789999999999999999999999999999999988777666554432           0125789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       ++|+||||||....       +..++...+++|+.++.+++++    +++.+.++||++||...... 
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  158 (267)
T 1iy8_A           80 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-  158 (267)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC-
Confidence            87774       78999999996432       1223456789999888766555    45567789999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc--c-ccce-e----ecccCcccCCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--E-THNI-T----LSQEDTLFGGQVS  284 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~--~-~~~~-~----~~~~~~~~~g~V~  284 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|+++.....  . .... .    ........+.+.+
T Consensus       159 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (267)
T 1iy8_A          159 -----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE  233 (267)
T ss_dssp             -----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcC
Confidence                 23456799999999987752       699999999999998742210  0 0000 0    0011122345689


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++|||+++++++.+. .+..|+++++.++..
T Consensus       234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          234 APEIAAVVAFLLSDDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            999999999999764 234689999988754

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.92  E-value=2.3e-24  Score=213.76  Aligned_cols=221  Identities=17%  Similarity=0.106  Sum_probs=167.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++                ..++.++.+|++|.++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~   68 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------------GPRVHALRSDIADLNE   68 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------GGGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCcceEEEccCCCHHH
Confidence            356789999999999999999999999999999999988777665432                1478999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++       +++|+||||||....      +..++...+++|+.++.++++++...  ..++||++||......   
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  145 (255)
T 4eso_A           69 IAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG---  145 (255)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB---
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC---
Confidence            77665       478999999996532      22335667999999999999999864  2359999999876332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc------eeecccCcccCCCCCHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------ITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~------~~~~~~~~~~~g~V~v~DV  288 (530)
                         ......|+.+|++.+.+.+.       .|++++.|+||+|.++.........      ..........+.+.+++|+
T Consensus       146 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv  222 (255)
T 4eso_A          146 ---HPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEV  222 (255)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHH
Confidence               23456899999999988762       5899999999999987532110000      0001111233456789999


Q ss_pred             HHHHHHHHhCCCCCCCcEEEEeCCCCCChhH
Q 009648          289 AELLACMAKNRSLSYCKVVEVIAETTAPLTP  319 (530)
Q Consensus       289 A~ai~~ll~~~~~~~g~vynv~~~~~~t~~~  319 (530)
                      |+++++++.+..+..|+++++.++...++.+
T Consensus       223 A~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          223 ARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence            9999999987555679999999997765544

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.92  E-value=1.2e-24  Score=217.50  Aligned_cols=216  Identities=12%  Similarity=0.047  Sum_probs=157.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|++|.+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~d~~   86 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----------------GKDVFVFSANLSDRK   86 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CSSEEEEECCTTSHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceEEEEeecCCHH
Confidence            3467889999999999999999999999999999999988776654321                157899999999999


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        87 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~  166 (266)
T 3grp_A           87 SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG  166 (266)
T ss_dssp             HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC
Confidence            8877764       79999999996532      22335667899999976666654    4567789999999865332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+.+.       .|+++++|+||+|.++...................+.+.+.+|||++
T Consensus       167 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~  240 (266)
T 3grp_A          167 ------NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFA  240 (266)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                  23456899999998877652       68999999999998864221110000011112233456789999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.+.. +..|+++++.++.
T Consensus       241 v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          241 TVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCccccCccCCEEEECCCe
Confidence            999997653 3468999998874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.92  E-value=1.5e-24  Score=217.56  Aligned_cols=217  Identities=18%  Similarity=0.173  Sum_probs=163.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.             ..++.++.+|++|.+++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~~~~~v   86 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-------------GVEADGRTCDVRSVPEI   86 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHHHH
Confidence            56789999999999999999999999999999999988777666555432             15689999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc------CCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~------gv~r~V~iSS~~v~~~  218 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++...      +.++||++||......
T Consensus        87 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~  166 (277)
T 2rhc_B           87 EALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG  166 (277)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence            77764       79999999996432      12234567899999999999987654      6679999999865322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc----c------cc-eeecccCcccC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----T------HN-ITLSQEDTLFG  280 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~----~------~~-~~~~~~~~~~~  280 (530)
                            ......|+.+|++.+.+++.       .|+++++||||+|+++......    .      .. ..........+
T Consensus       167 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  240 (277)
T 2rhc_B          167 ------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG  240 (277)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTS
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCC
Confidence                  23356799999999887763       5899999999999987422110    0      00 00001112234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+++++|||+++++++.++. ...|++|++.++.
T Consensus       241 r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          241 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            57899999999999997653 3468999998874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.92  E-value=1.6e-24  Score=215.06  Aligned_cols=215  Identities=16%  Similarity=0.102  Sum_probs=159.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.   +             ..++.++.+|+.|.+++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~D~~d~~~v   73 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG---L-------------ENGGFAVEVDVTKRASV   73 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C-------------TTCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---H-------------hcCCeEEEEeCCCHHHH
Confidence            4578999999999999999999999999999999998766554321   1             12678999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .++||++||...... 
T Consensus        74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  152 (263)
T 3ak4_A           74 DAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG-  152 (263)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC-
Confidence            88775       89999999996432      1223456789999999999888764    34 679999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----c-----cce-eecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----T-----HNI-TLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----~-----~~~-~~~~~~~~~~g  281 (530)
                           ......|+.+|++.+.+++.       .|+++++||||+|+++......     .     ... .........+.
T Consensus       153 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  227 (263)
T 3ak4_A          153 -----APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR  227 (263)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCS
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCC
Confidence                 22356799999999887753       5999999999999987432110     0     000 00011122345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++++|||+++++++.+.. +..|++|++.++..
T Consensus       228 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          228 IEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence            7899999999999997652 34688999998753

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=220.22  Aligned_cols=236  Identities=16%  Similarity=0.157  Sum_probs=172.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...         + ....++.++.+|+.|.+++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~-~~~~~~~~~~~Dv~d~~~v   93 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA---------G-VPAEKINAVVADVTEASGQ   93 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T-CCGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C-CCCceEEEEecCCCCHHHH
Confidence            56789999999999999999999999999999999998877766555432         1 0012689999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       ++|+||||||.....        ..++...+++|+.++.++++++..    .+ ++||++||......
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~  172 (297)
T 1xhl_A           94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ  172 (297)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence            77764       799999999964321        123456799999999999888764    45 79999999866432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--c------cce-eecccCcccCCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T------HNI-TLSQEDTLFGGQ  282 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~------~~~-~~~~~~~~~~g~  282 (530)
                      .     ......|+.+|++.+.+.+.       .|+++++||||+|.++......  .      ... .........+.+
T Consensus       173 ~-----~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  247 (297)
T 1xhl_A          173 A-----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  247 (297)
T ss_dssp             C-----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             C-----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCC
Confidence            1     02356799999999877652       6999999999999987422110  0      000 000011223456


Q ss_pred             CCHHHHHHHHHHHHhCC--CCCCCcEEEEeCCCCCChhHHHHHHHhcCC
Q 009648          283 VSNLQVAELLACMAKNR--SLSYCKVVEVIAETTAPLTPMEELLAKIPS  329 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~--~~~~g~vynv~~~~~~t~~~i~ell~~v~g  329 (530)
                      ++++|||+++++++.+.  .+..|++|++.++....+.+.+..+.+++.
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~  296 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVLS  296 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHTC
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhhc
Confidence            89999999999999754  335689999999877666666666655543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.92  E-value=3e-24  Score=212.10  Aligned_cols=218  Identities=14%  Similarity=0.091  Sum_probs=160.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+++||||||+|+||++++++|+++|++|++++| +.++...+.+.+...             ..++.++.+|+.|.++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~   71 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-------------GGEAIAVKGDVTVESD   71 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-------------CCceEEEECCCCCHHH
Confidence            45689999999999999999999999999999999 776666665544432             2568899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~  218 (530)
                      +.++++       ++|+||||||....      ...++...+++|+.++.++++++..    .+ .++||++||......
T Consensus        72 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~  151 (261)
T 1gee_A           72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP  151 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC
Confidence            877775       79999999996432      1223456789999999988877653    34 679999999865322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-cccee-ecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                            ..+...|+.+|++.+.+++.       .|+++++||||+|+++...... ..... ........+.+++++|+|
T Consensus       152 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  225 (261)
T 1gee_A          152 ------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA  225 (261)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred             ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHH
Confidence                  23456899999998877652       5899999999999987532110 00000 000111234578999999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++++.+. ....|++|++.++..
T Consensus       226 ~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          226 AVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCccccCCCCcEEEEcCCcc
Confidence            9999999754 234688999988753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.92  E-value=1.6e-24  Score=217.76  Aligned_cols=218  Identities=14%  Similarity=0.161  Sum_probs=162.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|++|.++
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~   87 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-------------GHDVDGSSCDVTSTDE   87 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence            567889999999999999999999999999999999998887776655432             2579999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh------cCCCEEEEEcCCCccC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNK  217 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~------~gv~r~V~iSS~~v~~  217 (530)
                      +.+++       +++|+||||||....      +..++...+++|+.++.++++++..      .+.++||++||.....
T Consensus        88 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~  167 (279)
T 3sju_A           88 VHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ  167 (279)
T ss_dssp             HHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc
Confidence            87766       378999999996532      2223456688999999999998754      4667999999986643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----------cceeecccCccc
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLF  279 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----------~~~~~~~~~~~~  279 (530)
                      .      ......|+.+|++.+.+++.       .|+++++|+||+|.++.......           ............
T Consensus       168 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  241 (279)
T 3sju_A          168 G------VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL  241 (279)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT
T ss_pred             C------CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Confidence            2      23356799999999887762       68999999999998864221100           000001112233


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.+.+++|||+++++++.+.. +..|++++|.++.
T Consensus       242 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          242 GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            456899999999999998653 3568999998875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.92  E-value=2.3e-24  Score=217.05  Aligned_cols=223  Identities=13%  Similarity=0.077  Sum_probs=168.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|++|.++
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   71 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------------GGEAAALAGDVGDEAL   71 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-------------TCCEEECCCCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHH
Confidence            356789999999999999999999999999999999998877766554321             2678999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +.++++       ++|+||||||....       +..++...+++|+.++.++++++.    +.+.++||++||......
T Consensus        72 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  151 (280)
T 3tox_A           72 HEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA  151 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC
Confidence            877764       79999999996421       223356679999999999988865    446679999999876422


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc---ccce-eecccCcccCCCCCHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---THNI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~---~~~~-~~~~~~~~~~g~V~v~D  287 (530)
                      +     ......|+.+|++.+.+++.       .|+++++|+||+|.++......   .... .........+.+.+++|
T Consensus       152 ~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  226 (280)
T 3tox_A          152 G-----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEE  226 (280)
T ss_dssp             C-----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHH
T ss_pred             C-----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHH
Confidence            2     23456799999999987752       5899999999999988543211   0000 00111223345689999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCCCCCh
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAETTAPL  317 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~~~t~  317 (530)
                      ||+++++++.+. .+..|++++|.++...+.
T Consensus       227 vA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          227 IAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            999999999865 335699999999865543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.92  E-value=1.3e-24  Score=215.82  Aligned_cols=218  Identities=15%  Similarity=0.183  Sum_probs=164.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++|+||||||+|+||+++++.|+++|++|+++ .|+.++.+.+.+.+...             ..++.++.+|++|.++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~   68 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL-------------GVKVLVVKANVGQPAK   68 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHH
Confidence            457899999999999999999999999999997 78887777766655432             2579999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||.+.... 
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-  147 (258)
T 3oid_A           69 IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-  147 (258)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-
Confidence            87776       467999999995432      222345678999999999988874    456679999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++.........  ..........+.+.+++|||+
T Consensus       148 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  222 (258)
T 3oid_A          148 -----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVD  222 (258)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 33457899999999988763       5899999999999887432211100  000111223356789999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++++.+.. +..|++++|.++..
T Consensus       223 ~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          223 TVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             HHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             HHHHHhCcccCCccCCEEEECCCcc
Confidence            9999998753 35699999998854

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.92  E-value=1.2e-24  Score=212.51  Aligned_cols=215  Identities=15%  Similarity=0.078  Sum_probs=158.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|+||||||+|+||++++++|+++|++|+++ .|+..+.+.+.+.++..             ..++.++.+|++|.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~   67 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-------------GGQAITFGGDVSKEADVE   67 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-------------TCEEEEEECCTTSHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEeCCCCCHHHHH
Confidence            3689999999999999999999999999995 78887776665555432             146889999999999888


Q ss_pred             HHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       ++|+||||||....      +..++...+++|+.++.++++++.+    .+.++||++||......   
T Consensus        68 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---  144 (244)
T 1edo_A           68 AMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG---  144 (244)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC---
Confidence            8774       79999999996532      2223456789999999999888765    46789999999855321   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|++.+.+++.       .|+++++||||+++++...................+.+++++|+|+++++
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  221 (244)
T 1edo_A          145 ---NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEF  221 (244)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHH
T ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence               12356799999998877652       68999999999999874321100000000111223457899999999999


Q ss_pred             HHhCCC--CCCCcEEEEeCCC
Q 009648          295 MAKNRS--LSYCKVVEVIAET  313 (530)
Q Consensus       295 ll~~~~--~~~g~vynv~~~~  313 (530)
                      ++.++.  ...|++|++.++.
T Consensus       222 l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          222 LALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTT
T ss_pred             HhCCCccCCcCCCEEEeCCCc
Confidence            995432  2458899998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.92  E-value=1.4e-24  Score=213.97  Aligned_cols=216  Identities=9%  Similarity=0.019  Sum_probs=139.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++||||||+|+||++++++|+++|++|++++|+.++...+.+++...             ..++.++.+|++|.++
T Consensus         6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   72 (253)
T 3qiv_A            6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD-------------GGTAISVAVDVSDPES   72 (253)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCEEEEEECCTTSHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            456789999999999999999999999999999999998888877666543             2578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCC---------CccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCcc
Q 009648          157 IEPALG-------NASVVICCIGASE---------KEVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTN  216 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~---------~~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~  216 (530)
                      ++++++       ++|+||||||...         .+..++...+++|+.++.+++++    +++.+.++||++||....
T Consensus        73 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  152 (253)
T 3qiv_A           73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW  152 (253)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence            887774       8999999999631         12223456799999996666555    455677899999998763


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DV  288 (530)
                      .         ....|+.+|++.+.+++.       .|+++++|+||+|+++........... ..........+.+++|+
T Consensus       153 ~---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  223 (253)
T 3qiv_A          153 L---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDL  223 (253)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHH
T ss_pred             C---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHH
Confidence            1         234699999999887752       589999999999998754321111110 01111222345678999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      |+++++++.+.. ...|++|++.++..
T Consensus       224 a~~~~~l~s~~~~~~tG~~~~vdgG~~  250 (253)
T 3qiv_A          224 VGMCLFLLSDEASWITGQIFNVDGGQI  250 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEC-----
T ss_pred             HHHHHHHcCccccCCCCCEEEECCCee
Confidence            999999997643 34689999998864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.92  E-value=5.1e-24  Score=213.06  Aligned_cols=217  Identities=18%  Similarity=0.142  Sum_probs=159.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.+++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   85 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-------------GLNVEGSVCDLLSRTER   85 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHHHH
Confidence            56789999999999999999999999999999999988777665554432             25789999999999888


Q ss_pred             HHHh--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      .+++        +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||..+... 
T Consensus        86 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-  164 (273)
T 1ae1_A           86 DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-  164 (273)
T ss_dssp             HHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC-
Confidence            7776        679999999996432      122345668899999999998874    456789999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----ccee-ecccCcccCCCCCHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNIT-LSQEDTLFGGQVSNL  286 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~~~~-~~~~~~~~~g~V~v~  286 (530)
                           ......|+.+|++.+.+.+.       .|+++++||||+|+++.......     .... ........+.+.+++
T Consensus       165 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  239 (273)
T 1ae1_A          165 -----LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ  239 (273)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHH
Confidence                 23356799999999987753       59999999999999885321100     0000 000111234568999


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |||+++++++.+. .+..|+++++.++.
T Consensus       240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          240 EVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            9999999999754 33468999998874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.92  E-value=1e-24  Score=212.95  Aligned_cols=215  Identities=14%  Similarity=0.077  Sum_probs=155.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEE-EEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-VECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~-v~~Dl~d~~sl  157 (530)
                      +|+||||||+|+||++++++|+++|++|+++ +|+.++.+.+.+.+...             ..++.+ +.+|+.|.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~   67 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR-------------GSPLVAVLGANLLEAEAA   67 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCSCEEEEECCTTSHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCceEEEEeccCCCHHHH
Confidence            3689999999999999999999999999998 78887777665544432             135666 89999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHH----HHHHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLV----DAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll----~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|+||||||....      ...++...+++|+.++.+++    +.+++.+.++||++||......  
T Consensus        68 ~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--  145 (245)
T 2ph3_A           68 TALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG--  145 (245)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC--
Confidence            7775       489999999996532      12234567899999955554    4555667889999999754221  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+++++...................+.+++++|+|++++
T Consensus       146 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  221 (245)
T 2ph3_A          146 ----NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVA  221 (245)
T ss_dssp             ----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                12356799999998877653       4899999999999987432110000000001112345689999999999


Q ss_pred             HHHhCCC-CCCCcEEEEeCCC
Q 009648          294 CMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++.++. ...|++|++.++.
T Consensus       222 ~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          222 FLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHTSGGGTTCCSCEEEESTTC
T ss_pred             HHhCcccccccCCEEEECCCC
Confidence            9997642 3458899998874

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.92  E-value=8.7e-24  Score=212.97  Aligned_cols=220  Identities=15%  Similarity=0.152  Sum_probs=163.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~   91 (283)
T 3v8b_A           25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-------------GGQAIALEADVSDELQ   91 (283)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            456789999999999999999999999999999999998877766554322             2578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      ++++++       ++|+||||||....       +..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        92 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~  171 (283)
T 3v8b_A           92 MRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT  171 (283)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC
Confidence            877764       79999999996421       22234567999999999999887    5567789999999865331


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-c------eeecccCccc--CCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N------ITLSQEDTLF--GGQ  282 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~------~~~~~~~~~~--~g~  282 (530)
                      .    .......|+.+|++.+.+++.       .|+++++|+||+|.++........ .      ..........  +.+
T Consensus       172 ~----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~  247 (283)
T 3v8b_A          172 F----TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQP  247 (283)
T ss_dssp             C----CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCC
T ss_pred             C----CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCC
Confidence            0    123456799999999988762       689999999999998754321100 0      1111111112  456


Q ss_pred             CCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+.+|||+++++++.+.. +..|++++|.++.
T Consensus       248 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          248 GRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            789999999999997643 3568999998873

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=1.9e-24  Score=212.02  Aligned_cols=216  Identities=13%  Similarity=0.061  Sum_probs=158.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+..              ..+++++.+|+.|.+++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~   69 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------------cCceEEEECCCCCHHHH
Confidence            4578999999999999999999999999999999998766655433211              15789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCC-CEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKV-NHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv-~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||.....      ..++...+++|+.++.++++++    ++.+. ++||++||...... 
T Consensus        70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-  148 (251)
T 1zk4_A           70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-  148 (251)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC-
Confidence            87764       599999999964321      1223567899999877766654    45566 79999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++.+.+++         ..|+++++||||+|+++.......... .........+.+++++|+|
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  223 (251)
T 1zk4_A          149 -----DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA  223 (251)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred             -----CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHH
Confidence                 2335689999999987764         358999999999999874322110000 0001112234578999999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++++.+.. ...|++|++.++.
T Consensus       224 ~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHcCcccccccCcEEEECCCc
Confidence            99999997643 3468899998874

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.92  E-value=4.4e-24  Score=211.70  Aligned_cols=218  Identities=13%  Similarity=0.026  Sum_probs=158.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++ .+.+.+.+...        .    ..++.++.+|+.|.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~----~~~~~~~~~D~~~~~~   69 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--------H----GVKVLYDGADLSKGEA   69 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--------H----TSCEEEECCCTTSHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc--------c----CCcEEEEECCCCCHHH
Confidence            456899999999999999999999999999999999876 66655544321        0    1468899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        70 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  148 (260)
T 1x1t_A           70 VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-  148 (260)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-
Confidence            877764       79999999996432      222345678999999999888875    456789999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc----------ce-eec-ccCcccC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH----------NI-TLS-QEDTLFG  280 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~----------~~-~~~-~~~~~~~  280 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||+|.++........          .. ... ......+
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  223 (260)
T 1x1t_A          149 -----SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL  223 (260)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCC
Confidence                 23356799999999987752       589999999999998753221000          00 000 1111234


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .+++++|+|+++++++.+. ....|++|++.++.
T Consensus       224 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            5789999999999999764 23468899998874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.92  E-value=5.5e-24  Score=214.12  Aligned_cols=219  Identities=14%  Similarity=0.076  Sum_probs=160.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++| +.++.+.+.+++...            ...++.++.+|+.|.+
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d~~   89 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL------------SSGTVLHHPADMTKPS   89 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT------------CSSCEEEECCCTTCHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc------------cCCcEEEEeCCCCCHH
Confidence            356789999999999999999999999999999999 555566555444321            1257999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      ++.++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        90 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  169 (281)
T 3v2h_A           90 EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA  169 (281)
T ss_dssp             HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC
Confidence            8877764       78999999996432      22334567999999999999887    4556789999999866332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc------------eeecccCccc
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------------ITLSQEDTLF  279 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~------------~~~~~~~~~~  279 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|+++.........            ..........
T Consensus       170 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  243 (281)
T 3v2h_A          170 ------SPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT  243 (281)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC
Confidence                  23346799999999988752       5899999999999987532211000            0001122334


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.+++++|||+++++++.+.. +..|+++++.++.
T Consensus       244 ~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          244 KKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            567899999999999998653 3468999998874

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.7e-24  Score=215.42  Aligned_cols=207  Identities=14%  Similarity=0.115  Sum_probs=158.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+..+..                      ..++.++.+|+.|.+++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------------~~~~~~~~~Dv~d~~~v   83 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------------------DPDIHTVAGDISKPETA   83 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------------------STTEEEEESCTTSHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------------------cCceEEEEccCCCHHHH
Confidence            56789999999999999999999999999999999875321                      24789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||..+.... 
T Consensus        84 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-  162 (260)
T 3un1_A           84 DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM-  162 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB-
T ss_pred             HHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC-
Confidence            87774       89999999996532      22334567889999999999887    45677899999997653211 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ...+...|+.+|++.+.+.+.       .|+++++|+||+|+++......   ..........+.+.+++|||++++
T Consensus       163 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~p~~r~~~~~dva~av~  236 (260)
T 3un1_A          163 ---VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET---HSTLAGLHPVGRMGEIRDVVDAVL  236 (260)
T ss_dssp             ---TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG---HHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH---HHHHhccCCCCCCcCHHHHHHHHH
Confidence               123456799999999988763       4899999999999998542211   011112223445688999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~  314 (530)
                      ++.+.. ...|++|+|.++..
T Consensus       237 ~L~~~~-~itG~~i~vdGG~~  256 (260)
T 3un1_A          237 YLEHAG-FITGEILHVDGGQN  256 (260)
T ss_dssp             HHHHCT-TCCSCEEEESTTGG
T ss_pred             HhcccC-CCCCcEEEECCCee
Confidence            995544 35799999998854

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.92  E-value=1.8e-24  Score=216.50  Aligned_cols=218  Identities=16%  Similarity=0.090  Sum_probs=164.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.+.             ..++.++.+|+.|.+++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~v   92 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA-------------GLEGRGAVLNVNDATAV   92 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-------------TCCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEEeCCCHHHH
Confidence            56789999999999999999999999999999999998888777666543             15788999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  170 (270)
T 3ftp_A           93 DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG--  170 (270)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--
Confidence            77764       79999999996432      223345678999999999998875    345679999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+.+.       .|+++++|+||+|.++...................+.+.+++|+|++++
T Consensus       171 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~  246 (270)
T 3ftp_A          171 ----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVA  246 (270)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                23456799999998877652       6899999999999876322111000111112223345689999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++.+. .+..|++|+|.++..
T Consensus       247 ~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          247 FLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHhCCCcCCccCcEEEECCCcc
Confidence            999654 335699999998854

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=3.2e-24  Score=210.84  Aligned_cols=216  Identities=13%  Similarity=0.077  Sum_probs=157.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCe-EEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v-~~v~~Dl~d~~s  156 (530)
                      +.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.                .++ .++.+|+.|.++
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   72 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----------------AAVAARIVADVTDAEA   72 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceeEEEEecCCHHH
Confidence            567899999999999999999999999999999999877665543321                346 889999999998


Q ss_pred             HHHHh------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++      .++|+||||||.....      ..++...+++|+.++.++++++    ++.+.++||++||....... 
T Consensus        73 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-  151 (254)
T 2wsb_A           73 MTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-  151 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-
Confidence            88776      5799999999964322      1123456889999977776665    45677899999998663321 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~DVA~a  291 (530)
                         ...+...|+.+|++.|.+++.       .|+++++||||+++++....... ... .........+.+++++|+|++
T Consensus       152 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  228 (254)
T 2wsb_A          152 ---RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAA  228 (254)
T ss_dssp             ---SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence               122336899999999988753       48999999999999874321110 000 000011123457899999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++.+. ....|++|++.++.
T Consensus       229 ~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          229 ALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCcccccccCCEEEECCCE
Confidence            99999764 33468899998773

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.92  E-value=4e-24  Score=213.48  Aligned_cols=219  Identities=13%  Similarity=0.143  Sum_probs=162.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHH-HHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV-KQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~-~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++...+.+.+ ...         +    .++.++.+|++|.+
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------~----~~~~~~~~Dl~~~~   84 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY---------G----VETMAFRCDVSNYE   84 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH---------C----CCEEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHH
Confidence            466789999999999999999999999999999999988777665554 221         1    46889999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++++       ++|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||..+...
T Consensus        85 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  164 (267)
T 1vl8_A           85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV  164 (267)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc
Confidence            8877764       799999999965321      12345678899999999988774    456789999999873222


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-cccee-ecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                      +     ......|+.+|++++.+++.       .|+++++|+||+|.++...... ..... ........+.+++.+|||
T Consensus       165 ~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA  239 (267)
T 1vl8_A          165 T-----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK  239 (267)
T ss_dssp             C-----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred             C-----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHH
Confidence            1     23456899999999988763       5999999999999887532110 00000 000112234578999999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++++.+. .+..|+++.+.++.
T Consensus       240 ~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          240 GVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHcCccccCCcCCeEEECCCC
Confidence            9999999764 33468899888873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.92  E-value=6.1e-25  Score=215.95  Aligned_cols=218  Identities=14%  Similarity=0.089  Sum_probs=160.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.+|+||||||+|+||++++++|+++|++|++++|+ .++.+.+.+++...             ..+++++.+|+.|.++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~   71 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD-------------GGDAAFFAADLATSEA   71 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT-------------TCEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc-------------CCceEEEECCCCCHHH
Confidence            456899999999999999999999999999999999 77777665554432             2578999999999999


Q ss_pred             HHHHhC-------CCcEEEEcccC-CCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC--C---CEEEEEcCC
Q 009648          157 IEPALG-------NASVVICCIGA-SEK------EVFDITGPYRIDFQATKNLVDAATI----AK--V---NHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~-~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g--v---~r~V~iSS~  213 (530)
                      ++++++       ++|+||||||. ...      +..++...+++|+.++.++++++..    .+  .   ++||++||.
T Consensus        72 ~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~  151 (258)
T 3afn_B           72 CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSI  151 (258)
T ss_dssp             HHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecch
Confidence            888775       89999999996 321      1122455689999999999887643    23  2   699999998


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHH
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~  286 (530)
                      .....+     ..+...|+.+|++.|.+++.       .|+++++||||+++++...................+.+++++
T Consensus       152 ~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (258)
T 3afn_B          152 AGHTGG-----GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAE  226 (258)
T ss_dssp             HHHHCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGG
T ss_pred             hhccCC-----CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHH
Confidence            653211     23456899999999988753       489999999999998754321000000001112234578999


Q ss_pred             HHHHHHHHHHhCCC--CCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNRS--LSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~~--~~~g~vynv~~~~  313 (530)
                      |+|+++++++.+..  ...|++|++.++.
T Consensus       227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          227 EMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            99999999997642  2358899998875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.92  E-value=6e-24  Score=212.22  Aligned_cols=216  Identities=18%  Similarity=0.131  Sum_probs=159.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--  154 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++| +.++.+.+.+++...            ...++.++.+|+.|.  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~   76 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA------------RAGSAVLCKGDLSLSSS   76 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH------------STTCEEEEECCCSSSTT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh------------cCCceEEEeccCCCccc
Confidence            45689999999999999999999999999999999 887777666554432            015789999999999  


Q ss_pred             --hhHHHHhC-------CCcEEEEcccCCCCc------c-----------CCCCcchHhHHHHHHHHHHHHHhc---CC-
Q 009648          155 --VQIEPALG-------NASVVICCIGASEKE------V-----------FDITGPYRIDFQATKNLVDAATIA---KV-  204 (530)
Q Consensus       155 --~sl~~a~~-------~vD~VI~~Ag~~~~~------~-----------~~~~~~~~vNv~gt~~Ll~aa~~~---gv-  204 (530)
                        +++.++++       ++|+||||||.....      .           .++...+++|+.++.++++++...   +. 
T Consensus        77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  156 (276)
T 1mxh_A           77 LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGA  156 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-----
T ss_pred             cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCC
Confidence              88777664       799999999964321      1           233457899999999999998873   44 


Q ss_pred             -----CEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceee
Q 009648          205 -----NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL  272 (530)
Q Consensus       205 -----~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~  272 (530)
                           ++||++||......      ......|+.+|++.+.+++.       .|+++++||||+|+++ ..........+
T Consensus       157 ~~~~~g~iv~isS~~~~~~------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~  229 (276)
T 1mxh_A          157 WRSRNLSVVNLCDAMTDLP------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEY  229 (276)
T ss_dssp             --CCCEEEEEECCGGGGSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHH
T ss_pred             CCCCCcEEEEECchhhcCC------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHH
Confidence                 79999999866432      23456799999999987752       5899999999999998 22110000000


Q ss_pred             cccCcccCC-CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          273 SQEDTLFGG-QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       273 ~~~~~~~~g-~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                       ......+. +++++|+|+++++++.+.. ...|++|++.++.
T Consensus       230 -~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          230 -RRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             -HTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -HhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence             01122234 6899999999999997643 3468899998874

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.92  E-value=5.5e-24  Score=210.57  Aligned_cols=215  Identities=16%  Similarity=0.075  Sum_probs=159.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|++|.+++.+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~v~~   68 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA-------------GGHAVAVKVDVSDRDQVFA   68 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHHH
Confidence            478999999999999999999999999999999988777766554432             1468999999999998887


Q ss_pred             HhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCCCCc
Q 009648          160 ALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~~~~  221 (530)
                      +++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .++||++||......   
T Consensus        69 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  145 (256)
T 1geg_A           69 AVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG---  145 (256)
T ss_dssp             HHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC---
Confidence            775       89999999996432      1223456789999999888777653    35 579999999865332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc----------ccce-eecccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----------THNI-TLSQEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~----------~~~~-~~~~~~~~~~g~V  283 (530)
                         ......|+.+|++.+.+++.       .|+++++||||+|.++......          .... .........+.++
T Consensus       146 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (256)
T 1geg_A          146 ---NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS  222 (256)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCc
Confidence               12346799999999887753       6899999999999987421110          0000 0000112234578


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|||+++++++.+. .+..|+++++.++.
T Consensus       223 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          223 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999999999764 33468999998874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.92  E-value=1.9e-23  Score=207.42  Aligned_cols=220  Identities=16%  Similarity=0.119  Sum_probs=162.9

Q ss_pred             CCCCCCEEEEECCCc-HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           76 DSKDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG-~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...++++||||||+| +||++++++|+++|++|++++|+.++...+.+++.+.            ...++.++.+|++|.
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~   85 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------------GLGRVEAVVCDVTST   85 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------CSSCEEEEECCTTCH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------------CCCceEEEEeCCCCH
Confidence            346788999999997 6999999999999999999999998887776665432            125899999999999


Q ss_pred             hhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc-----CCCEEEEEcCCCcc
Q 009648          155 VQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTN  216 (530)
Q Consensus       155 ~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r~V~iSS~~v~  216 (530)
                      ++++++++       ++|+||||||....      +..++...+++|+.++.++++++...     +.++||++||....
T Consensus        86 ~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~  165 (266)
T 3o38_A           86 EAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW  165 (266)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc
Confidence            88877763       78999999996432      22234567899999999999887653     55689999997663


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      ..      ......|+.+|++.+.+++.       .|+++++|+||+|.++....... ............+.+++.+|+
T Consensus       166 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dv  239 (266)
T 3o38_A          166 RA------QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEV  239 (266)
T ss_dssp             CC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHH
T ss_pred             CC------CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHH
Confidence            32      23457899999999988752       68999999999999875322111 111111122334567899999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++++++.+. ....|+++++.++.
T Consensus       240 a~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          240 AATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHHHHcCccccCccCCEEEEcCCc
Confidence            99999999764 33568999998874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.91  E-value=1e-23  Score=212.08  Aligned_cols=218  Identities=12%  Similarity=0.115  Sum_probs=153.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++| +.++.+.+.+++...             ..++.++.+|++|.++
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~   93 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL-------------GARVIFLRADLADLSS   93 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSGGG
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence            45789999999999999999999999999999996 666666665555432             2579999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCC--C------ccCCCCcchHhHHHHHHHHHHHHHhc----C---CCEEEEEcCCC
Q 009648          157 IEPALG-------NASVVICCIGASE--K------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLG  214 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~--~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g---v~r~V~iSS~~  214 (530)
                      ++++++       ++|+||||||...  .      +..++...+++|+.++.++++++...    +   .++||++||..
T Consensus        94 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~  173 (280)
T 4da9_A           94 HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS  173 (280)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchh
Confidence            877774       7999999999631  1      22335567899999999888886543    3   56999999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCcccCCCCCHH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~g~V~v~  286 (530)
                      ....      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.......... .+.......+.+.+++
T Consensus       174 ~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (280)
T 4da9_A          174 AVMT------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPE  247 (280)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHH
T ss_pred             hccC------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHH
Confidence            6332      23346799999999987752       68999999999999875332111100 1111122334568899


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      |||+++++++.+.. +..|++++|.++..
T Consensus       248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          248 DIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             HHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999998764 34689999998854

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.91  E-value=8.2e-25  Score=208.22  Aligned_cols=184  Identities=15%  Similarity=0.100  Sum_probs=145.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||++++++|+++  +|++++|+.++...+.+.+                 .. +++.+|+.|.+++.++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----------------~~-~~~~~D~~~~~~~~~~   60 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----------------GA-RALPADLADELEAKAL   60 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----------------TC-EECCCCTTSHHHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----------------cC-cEEEeeCCCHHHHHHH
Confidence            57999999999999999999999  9999999987766554321                 12 7888999999999988


Q ss_pred             hC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHH
Q 009648          161 LG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV  231 (530)
Q Consensus       161 ~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y  231 (530)
                      ++   ++|+||||||....      +..++...+++|+.++.++++++++.+.++||++||..+...      ..+...|
T Consensus        61 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~------~~~~~~Y  134 (207)
T 2yut_A           61 LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ------VPGFAAY  134 (207)
T ss_dssp             HHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS------STTBHHH
T ss_pred             HHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC------CCCcchH
Confidence            87   89999999996532      223345678999999999999997777789999999866322      2345789


Q ss_pred             HHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          232 LLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       232 ~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      +.+|+++|.+++.       .|+++++||||+++++...          ........+++++|+|++++++++++.
T Consensus       135 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          135 AAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------PLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999988763       6999999999999987421          111223568999999999999998775

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=5.2e-24  Score=210.86  Aligned_cols=213  Identities=12%  Similarity=0.053  Sum_probs=157.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||++++++|+++|++|++++|+.++ ..+.+.   .              .+ .++.+|++|.+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~---~--------------~~-~~~~~D~~~~~~~   64 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA---I--------------GG-AFFQVDLEDERER   64 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH---H--------------TC-EEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH---h--------------hC-CEEEeeCCCHHHH
Confidence            457899999999999999999999999999999999876 443321   1              14 7889999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        65 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--  142 (256)
T 2d1y_A           65 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA--  142 (256)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCC--
Confidence            7766       3789999999965321      12345678999999999988775    356789999999865332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc----c-ccce-eecccCcccCCCCCHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----E-THNI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~----~-~~~~-~~~~~~~~~~g~V~v~D  287 (530)
                          ......|+.+|++.+.+++.       .|+++++|+||++.++.....    . .... .........+.+++++|
T Consensus       143 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (256)
T 2d1y_A          143 ----EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE  218 (256)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHH
Confidence                23356799999999988763       589999999999987632110    0 0000 00011122345789999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +|+++++++.+.. +..|++|++.++...
T Consensus       219 vA~~~~~l~s~~~~~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          219 VAEAVLFLASEKASFITGAILPVDGGMTA  247 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHhCchhcCCCCCEEEECCCccc
Confidence            9999999997652 346889999988643

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=1.7e-23  Score=209.79  Aligned_cols=218  Identities=16%  Similarity=0.071  Sum_probs=161.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-------------CchhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-------------~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|             +.++.+.+.+.+...             ..+
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~   78 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ-------------GRK   78 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT-------------TCC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-------------CCe
Confidence            466889999999999999999999999999999998             455555554444322             267


Q ss_pred             eEEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CC
Q 009648          144 LELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VN  205 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~  205 (530)
                      +.++.+|+.|.++++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+ .+
T Consensus        79 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g  158 (280)
T 3pgx_A           79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGG  158 (280)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred             EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence            8999999999998887764       79999999996532      223345678899999999988874    333 56


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-------cccee
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-------THNIT  271 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-------~~~~~  271 (530)
                      +||++||......      ......|+.+|++.+.+.+.       .|+++++|+||+|+++......       .....
T Consensus       159 ~iv~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  232 (280)
T 3pgx_A          159 SIVVVSSSAGLKA------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFV  232 (280)
T ss_dssp             EEEEECCGGGTSC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGG
T ss_pred             EEEEEcchhhccC------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhh
Confidence            9999999866432      23356799999999987652       6899999999999998643200       00000


Q ss_pred             --ecccCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          272 --LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       272 --~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                        +........++++++|||+++++++.+.. +..|+++++.++.
T Consensus       233 ~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          233 HSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence              00111111257899999999999997653 3468999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=1.2e-23  Score=207.52  Aligned_cols=213  Identities=13%  Similarity=0.123  Sum_probs=153.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+. ++.+.   .+++.             ..++.++.+|++|.++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-------------~~~~~~~~~Dv~~~~~   68 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL-------------GRRVLTVKCDVSQPGD   68 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc-------------CCcEEEEEeecCCHHH
Confidence            4578999999999999999999999999999999998 65443   22211             1578999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|+||||||....      +..++...+++|+.++.+++++    +++.+.++||++||...... 
T Consensus        69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (249)
T 2ew8_A           69 VEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-  147 (249)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC-
Confidence            87765       589999999996432      2223456789999998888777    55667789999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcc-ccccc--ceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETH--NITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~-~~~~~--~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++... .....  ... .......+.+++++|+|
T Consensus       148 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~dva  221 (249)
T 2ew8_A          148 -----IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVL-PNMLQAIPRLQVPLDLT  221 (249)
T ss_dssp             -----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSSSCSCCCTHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHH-HHhhCccCCCCCHHHHH
Confidence                 23456799999999988763       5899999999999987532 11100  000 00001234568999999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++++.+. .+..|++|++.++.
T Consensus       222 ~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          222 GAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHcCcccCCCCCcEEEECCCc
Confidence            9999999764 33468899998874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.91  E-value=5.2e-24  Score=212.01  Aligned_cols=217  Identities=15%  Similarity=0.101  Sum_probs=164.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|++|.+++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   75 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT-------------GRRALSVGTDITDDAQV   75 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence            56789999999999999999999999999999999998888777665543             25799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       ++|+||||||....       +..++...+++|+.++.++++++.    +.+ ++||++||...... 
T Consensus        76 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-  153 (264)
T 3ucx_A           76 AHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS-  153 (264)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-
Confidence            77763       78999999986421       223345679999999999988865    334 79999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----------cceeecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----------~~~~~~~~~~~~~g  281 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|+++.......           ............+.
T Consensus       154 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  228 (264)
T 3ucx_A          154 -----QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKR  228 (264)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSS
T ss_pred             -----CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCccc
Confidence                 23456799999999887652       78999999999999874321100           00001112233445


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +.+++|||+++++++.+. ....|++++|.++..
T Consensus       229 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          229 LPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             CCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            789999999999999764 335699999988853

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.91  E-value=3.1e-24  Score=211.97  Aligned_cols=224  Identities=12%  Similarity=0.047  Sum_probs=161.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||++++++|+++|++|++++|+..+.....+.+.+.            ...++.++.+|+.|.+++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~~~~   79 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE------------FGVKTKAYQCDVSNTDIV   79 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH------------HTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh------------cCCeeEEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999876655444433221            025789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g-v~r~V~iSS~~v~~~~  219 (530)
                      +++++       .+|+||||||....      +..++...+++|+.++.++++++...    + .++||++||..+....
T Consensus        80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  159 (265)
T 1h5q_A           80 TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN  159 (265)
T ss_dssp             HHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc
Confidence            77663       58999999996432      12234456899999999999987643    3 4799999997653321


Q ss_pred             Cc-cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          220 FP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~-~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      .. .....+...|+.+|++.+.+++.       .|+++++||||+|+++...................+.+++++|+|++
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  239 (265)
T 1h5q_A          160 QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQ  239 (265)
T ss_dssp             EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHH
Confidence            11 11223467899999999988763       58999999999999875332110000000111223456899999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++.+. ....|++|++.++.
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          240 AILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhhccCchhcCcCcEEEecCCE
Confidence            99999764 33468999998874

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.91  E-value=6.6e-24  Score=213.43  Aligned_cols=218  Identities=13%  Similarity=0.084  Sum_probs=159.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..             ..++.++.+|++|.++
T Consensus        41 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~d~~~  107 (285)
T 2c07_A           41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-------------GYESSGYAGDVSKKEE  107 (285)
T ss_dssp             CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc-------------CCceeEEECCCCCHHH
Confidence            355789999999999999999999999999999999987777665544322             2578999999999998


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|+||||||....      ...++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus       108 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  186 (285)
T 2c07_A          108 ISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG-  186 (285)
T ss_dssp             HHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-
Confidence            88776       479999999996532      122345678999999887777765    457789999999855322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|.+.+.+++.       .|+++++||||+|.++...................+.+++++|+|+++
T Consensus       187 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~  261 (285)
T 2c07_A          187 -----NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLA  261 (285)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence                 12346799999998877652       589999999999998743211100000000112234578999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++.+.. ...|++|++.++.
T Consensus       262 ~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          262 CFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCCCCCEEEeCCCc
Confidence            99997643 3468899998874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.91  E-value=1.1e-23  Score=210.96  Aligned_cols=226  Identities=14%  Similarity=0.094  Sum_probs=163.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------------chhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      .+.++|+||||||+|+||+++++.|+++|++|++++|+            ..+.+.+...+...             ..+
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~   72 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-------------GRK   72 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-------------TSC
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-------------CCc
Confidence            34678999999999999999999999999999999997            44444443333322             267


Q ss_pred             eEEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEE
Q 009648          144 LELVECDLEKRVQIEPALG-------NASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMV  210 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~i  210 (530)
                      +.++.+|+.|.+++.++++       ++|+||||||....    +..++...+++|+.++.++++++...  +.++||++
T Consensus        73 ~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i  152 (287)
T 3pxx_A           73 AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT  152 (287)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred             eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence            9999999999998877764       79999999996532    22335667999999999999999875  44699999


Q ss_pred             cCCCccCC-----CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----cc----c
Q 009648          211 SSLGTNKF-----GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----TH----N  269 (530)
Q Consensus       211 SS~~v~~~-----~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----~~----~  269 (530)
                      ||......     ............|+.+|++.+.+.+.       .|+++++|+||+|.++......     ..    .
T Consensus       153 sS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  232 (287)
T 3pxx_A          153 GSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAP  232 (287)
T ss_dssp             CCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSC
T ss_pred             ccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccc
Confidence            99754211     11111123456799999999988753       5999999999999988543210     00    0


Q ss_pred             e------eecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          270 I------TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       270 ~------~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .      .........+.+++++|||+++++++.+. .+..|++++|.++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          233 SRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             CHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence            0      00011112256789999999999999764 335699999998853

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.91  E-value=9.3e-24  Score=212.96  Aligned_cols=221  Identities=16%  Similarity=0.051  Sum_probs=162.2

Q ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        75 ~~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +....+|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                ..+++++.+|++|.
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~d~   74 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----------------AGQVEVRELDLQDL   74 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----------------SSEEEEEECCTTCH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------cCCeeEEEcCCCCH
Confidence            34567899999999999999999999999999999999988776653211                25799999999999


Q ss_pred             hhHHHHhC---CCcEEEEcccCCC----CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-------
Q 009648          155 VQIEPALG---NASVVICCIGASE----KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-------  220 (530)
Q Consensus       155 ~sl~~a~~---~vD~VI~~Ag~~~----~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-------  220 (530)
                      +++.++++   ++|+||||||...    .+..++...+++|+.++.++++++.....+|||++||........       
T Consensus        75 ~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~  154 (291)
T 3rd5_A           75 SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNW  154 (291)
T ss_dssp             HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTC
T ss_pred             HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccc
Confidence            99998886   6799999999643    234556778999999999999999988777999999976532211       


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CC--CCEEEEEcCcccCCCcccccccceeecccCcccCCC-CCHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SG--LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQVAE  290 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~g--l~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~-V~v~DVA~  290 (530)
                      ......+...|+.+|++.+.+++.       .|  ++++.|+||+|.++............ ......... .+.+|+|+
T Consensus       155 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~A~  233 (291)
T 3rd5_A          155 RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDA-LMSAATRVVATDADFGAR  233 (291)
T ss_dssp             SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHHHH
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHH-HHHHHHHHHhCCHHHHHH
Confidence            012235567899999998877652       45  99999999999887533211000000 000111112 35899999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      ++++++.++ ...|+.|++.++.
T Consensus       234 ~~~~l~~~~-~~~G~~~~vdgG~  255 (291)
T 3rd5_A          234 QTLYAASQD-LPGDSFVGPRFGY  255 (291)
T ss_dssp             HHHHHHHSC-CCTTCEEEETTSS
T ss_pred             HHHHHHcCC-CCCCceeCCcccc
Confidence            999999986 4678888886643

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.91  E-value=7e-24  Score=210.04  Aligned_cols=216  Identities=16%  Similarity=0.146  Sum_probs=160.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|+||||||+|+||+++++.|+++|++|++++|+.++  ...+.+.++..             ..++.++.+|+.|.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   68 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA-------------DQKAVFVGLDVTDKANF   68 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999876  55554444321             25789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCC-CEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKV-NHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv-~r~V~iSS~~v~~~~  219 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+. ++||++||...... 
T Consensus        69 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  147 (258)
T 3a28_C           69 DSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG-  147 (258)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-
Confidence            77764       79999999996432      2223456789999999999888764    366 79999999865332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--------c--cc-eeecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------T--HN-ITLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--------~--~~-~~~~~~~~~~~g  281 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++......        .  .. ..........+.
T Consensus       148 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  222 (258)
T 3a28_C          148 -----FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR  222 (258)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSS
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCC
Confidence                 23356799999999977752       5899999999999876321100        0  00 000001122345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +.+.+|||+++++++.+.. +..|+++++.++..
T Consensus       223 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          223 PSVPEDVAGLVSFLASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSC
T ss_pred             ccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEe
Confidence            7899999999999997652 35689999988753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.91  E-value=3.1e-24  Score=215.67  Aligned_cols=217  Identities=15%  Similarity=0.101  Sum_probs=161.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|++|.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~d~~   88 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----------------GCGAAACRVDVSDEQ   88 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------------CSSCEEEECCTTCHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------------CCcceEEEecCCCHH
Confidence            3467889999999999999999999999999999999988776654432                157899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~  218 (530)
                      ++.+++       +++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||......
T Consensus        89 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~  168 (277)
T 3gvc_A           89 QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA  168 (277)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC
Confidence            877766       378999999996532      2233556799999999988888753    56679999999866332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc--c-ceeec-cc---CcccCCCCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--H-NITLS-QE---DTLFGGQVS  284 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~--~-~~~~~-~~---~~~~~g~V~  284 (530)
                            ......|+.+|++.+.+.+       ..|+++++|+||+|+++.......  . ..... ..   ....+.+.+
T Consensus       169 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  242 (277)
T 3gvc_A          169 ------VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAA  242 (277)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBC
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCC
Confidence                  2345689999999998876       268999999999999874221100  0 00000 00   112345689


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++|||+++++++.+. ....|++++|.++..
T Consensus       243 pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          243 PEEMAGIVVFLLSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCcch
Confidence            999999999999764 335689999988754

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.91  E-value=6e-24  Score=210.67  Aligned_cols=219  Identities=16%  Similarity=0.183  Sum_probs=158.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHH-HHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE-NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~-~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++||||||+|+||+++++.|+++|++|++++|+..... .+.+.+..             ...++.++.+|++|.+++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~~~v   72 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-------------VEERLQFVQADVTKKEDL   72 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG-------------GGGGEEEEECCTTSHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-------------cCCceEEEEecCCCHHHH
Confidence            4679999999999999999999999999999988765433 32222111             125799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCC--CC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCcc-C
Q 009648          158 EPALG-------NASVVICCIGAS--EK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN-K  217 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~--~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~-~  217 (530)
                      .++++       ++|+||||||..  ..      +..++...+++|+.++.++++++    ++.+.++||++||.+.. .
T Consensus        73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~  152 (264)
T 3i4f_A           73 HKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA  152 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc
Confidence            87774       799999999932  11      22234567899999999999987    56677899999998543 2


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .+     ......|+.+|++.+.+++.       .|+++++|+||+|+++...................+.+.+.+|||+
T Consensus       153 ~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  227 (264)
T 3i4f_A          153 PG-----WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIAR  227 (264)
T ss_dssp             CC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHH
T ss_pred             CC-----CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHH
Confidence            22     23456899999999877652       6899999999999987533211111111112223345689999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      ++++++.+.. ...|++|++.++...
T Consensus       228 ~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          228 TISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             HHHHHcCcccCCCCCcEEEEcCceee
Confidence            9999998653 346999999998654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.91  E-value=9.5e-24  Score=210.69  Aligned_cols=218  Identities=15%  Similarity=0.144  Sum_probs=155.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      |.++++||||||+|+||++++++|+++|++|+++ .|+.+..+.+.+.+...             ..++.++.+|+.|.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   89 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES-------------GGEAVAIPGDVGNAA   89 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCEEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc-------------CCcEEEEEcCCCCHH
Confidence            4457899999999999999999999999999887 67777666665555432             257899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc-------CCCEEEEEcCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~-------gv~r~V~iSS~~  214 (530)
                      +++++++       ++|+||||||....       +..++...+++|+.++.++++++...       +.++||++||..
T Consensus        90 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~  169 (272)
T 4e3z_A           90 DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMA  169 (272)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTH
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchH
Confidence            8877764       78999999996532       22334567999999999999887643       356899999976


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ceeecccCcccCCCCCHH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~~~~~~~~~g~V~v~  286 (530)
                      .....     ...+..|+.+|++.+.+++.       .|+++++|+||+|+++........ ...........+.+.+++
T Consensus       170 ~~~~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e  244 (272)
T 4e3z_A          170 AILGS-----ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPE  244 (272)
T ss_dssp             HHHCC-----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHH
T ss_pred             hccCC-----CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHH
Confidence            53221     11345699999999987652       589999999999998753221100 011111122334567899


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      |+|+++++++.+.. ...|++|+|.++
T Consensus       245 dvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          245 EVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCCccccccCCEEeecCC
Confidence            99999999997543 346899999876

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.91  E-value=4.7e-24  Score=213.86  Aligned_cols=218  Identities=14%  Similarity=0.049  Sum_probs=161.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+. ....+.+++...             ..++.++.+|+.|.++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~   93 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADG-------------GGSAEAVVADLADLEG   93 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTT-------------TCEEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence            46688999999999999999999999999999999764 344444333321             2578999999999988


Q ss_pred             HHHHh------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +.++.      +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        94 v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~--  171 (273)
T 3uf0_A           94 AANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG--  171 (273)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC--
Confidence            77655      479999999996532      223345679999999999988763    457789999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|++.+.+.+.       .|+++++|+||+|+++.........  ..........+.+.+++|||++
T Consensus       172 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~  247 (273)
T 3uf0_A          172 ----GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP  247 (273)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence                23456899999999987752       6899999999999987532211000  0000112233457889999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++.+. .+..|++++|.++..
T Consensus       248 v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          248 AVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHhCchhcCCcCCEEEECcCcc
Confidence            99999864 335799999988753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=2.8e-24  Score=213.75  Aligned_cols=223  Identities=13%  Similarity=0.113  Sum_probs=160.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+++++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+.+.           ....++.++.+|++|.++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~D~~~~~~   72 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-----------FEPQKTLFIQCDVADQQQ   72 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-----------SCGGGEEEEECCTTSHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-----------cCCCceEEEecCCCCHHH
Confidence            456789999999999999999999999999999999987766554433211           012468999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCccCCCCcchHhHHHHHHHH----HHHHHhcC---CCEEEEEcCCCccCCCCcc
Q 009648          157 IEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNL----VDAATIAK---VNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~L----l~aa~~~g---v~r~V~iSS~~v~~~~~~~  222 (530)
                      +.++++       ++|+||||||...  ..++...+++|+.++.++    ++.+++.+   .++||++||..+...    
T Consensus        73 v~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  146 (267)
T 2gdz_A           73 LRDTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP----  146 (267)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC----
Confidence            877764       5899999999653  345667889998876555    44454443   579999999866332    


Q ss_pred             ccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCccccccc----cee-ecc---cCcccCCCCCH
Q 009648          223 AILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETH----NIT-LSQ---EDTLFGGQVSN  285 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~~----~~~-~~~---~~~~~~g~V~v  285 (530)
                        ......|+.+|++.+.+++         ..|+++++||||+|.++........    ... ...   ......+++++
T Consensus       147 --~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (267)
T 2gdz_A          147 --VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDP  224 (267)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCH
Confidence              1234579999999887654         2689999999999988632111000    000 000   00011246899


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhH
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTP  319 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~  319 (530)
                      +|+|+++++++.+.. ..|++|+|.++...++.+
T Consensus       225 ~dvA~~v~~l~s~~~-~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          225 PLIANGLITLIEDDA-LNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             HHHHHHHHHHHHCTT-CSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHHHHhcCcC-CCCcEEEecCCCcccccC
Confidence            999999999999875 579999999987655444

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.91  E-value=5.3e-24  Score=212.31  Aligned_cols=220  Identities=16%  Similarity=0.076  Sum_probs=165.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.+.            ...++.++.+|+.|.+
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~~~~   83 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ------------FGTDVHTVAIDLAEPD   83 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------------HCCCEEEEECCTTSTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------------cCCcEEEEEecCCCHH
Confidence            3466889999999999999999999999999999999998887776665432            0257999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~  217 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .++||++||.....
T Consensus        84 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (266)
T 4egf_A           84 APAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA  163 (266)
T ss_dssp             HHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc
Confidence            8777663       79999999996532      2223456789999999999888753    23 46999999987643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc--ceeecccCcccCCCCCHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~--~~~~~~~~~~~~g~V~v~DV  288 (530)
                      .      ......|+.+|++.+.+.+.       .|++++.|+||+|.++........  ...........+.+.+++||
T Consensus       164 ~------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  237 (266)
T 4egf_A          164 P------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEV  237 (266)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHH
T ss_pred             C------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHH
Confidence            2      23456799999999977652       689999999999988642211000  00001112233456889999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++++++.+. .+..|++++|.++.
T Consensus       238 a~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          238 SDAVVWLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCccCcEEEECCCc
Confidence            99999999764 33579999998875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=7.9e-24  Score=212.44  Aligned_cols=217  Identities=12%  Similarity=0.093  Sum_probs=159.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++..              .+++.++.+|++|.++
T Consensus        26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~~~~~~~~Dv~d~~~   91 (276)
T 2b4q_A           26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA--------------YGDCQAIPADLSSEAG   91 (276)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT--------------SSCEEECCCCTTSHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------cCceEEEEeeCCCHHH
Confidence            35678999999999999999999999999999999998776665543321              1378899999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCC----CEEEEEcCCCc
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV----NHFIMVSSLGT  215 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv----~r~V~iSS~~v  215 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.    ++||++||..+
T Consensus        92 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~  171 (276)
T 2b4q_A           92 ARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG  171 (276)
T ss_dssp             HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH
Confidence            877764       79999999996432      222345678999999988877764    3454    79999999866


Q ss_pred             cCCCCccccccchh-HHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeeccc--CcccCCCCCH
Q 009648          216 NKFGFPAAILNLFW-GVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE--DTLFGGQVSN  285 (530)
Q Consensus       216 ~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~--~~~~~g~V~v  285 (530)
                      ....      .... .|+.+|++++.+++.       .|+++++|+||+|.++...............  ....+.++++
T Consensus       172 ~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  245 (276)
T 2b4q_A          172 ISAM------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRP  245 (276)
T ss_dssp             TCCC------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCH
T ss_pred             cCCC------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCH
Confidence            3321      1223 799999999987753       5899999999999987532111000000001  1223457899


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|||+++++++.+. .+..|++|++.++.
T Consensus       246 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          246 EEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            99999999999764 33568999988874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.91  E-value=1.5e-23  Score=209.40  Aligned_cols=218  Identities=14%  Similarity=0.096  Sum_probs=159.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+|+||||||+|+||++++++|+++|++|++++|+. ...+.+.+.+++.             ..++.++.+|+.|.+
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~   92 (271)
T 4iin_A           26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-------------GYKAAVIKFDAASES   92 (271)
T ss_dssp             CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHH
Confidence            45678999999999999999999999999999999954 4445554444332             257999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      ++.++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......
T Consensus        93 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  172 (271)
T 4iin_A           93 DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG  172 (271)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC
Confidence            8877774       79999999996532      222345678999999988877764    446679999999755322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|.++...................+.+.+.+|+|++
T Consensus       173 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~  246 (271)
T 4iin_A          173 ------NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEA  246 (271)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHH
T ss_pred             ------CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence                  23456799999999987652       68999999999998875332211111111122233457899999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++.+. ....|+++++.++.
T Consensus       247 i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          247 VAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhCCCcCCCcCCEEEeCCCe
Confidence            99999865 33579999998874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.91  E-value=1.2e-23  Score=209.67  Aligned_cols=219  Identities=14%  Similarity=0.114  Sum_probs=159.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..+++||||||+|+||+++++.|+++|++|++++ |+......+...+...             ..++.++.+|++|.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   88 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-------------GRDFKAYAVDVADFE   88 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-------------TCCCEEEECCTTCHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-------------CCceEEEEecCCCHH
Confidence            46678999999999999999999999999999999 4544444443333221             267999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......
T Consensus        89 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  168 (269)
T 3gk3_A           89 SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG  168 (269)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC
Confidence            8877764       79999999996532      222345678999999999888865    356679999999755322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|.++........... ........+.+.+++|+|+
T Consensus       169 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~  242 (269)
T 3gk3_A          169 ------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAA  242 (269)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHH
T ss_pred             ------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHH
Confidence                  23456899999998877652       589999999999998754321111111 1112223345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++++.+.. ...|++|+|.++..
T Consensus       243 ~v~~L~s~~~~~itG~~i~vdgG~~  267 (269)
T 3gk3_A          243 LIAFLCSDDAGFVTGADLAINGGMH  267 (269)
T ss_dssp             HHHHHTSTTCTTCCSCEEEESTTSC
T ss_pred             HHHHHhCCCcCCeeCcEEEECCCEe
Confidence            9999998653 35699999998864

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.91  E-value=8.4e-24  Score=212.46  Aligned_cols=217  Identities=13%  Similarity=0.102  Sum_probs=163.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++...+.+++                ..++.++.+|++|.++
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~d~~~   87 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----------------GSKAFGVRVDVSSAKD   87 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------------CTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceEEEEecCCCHHH
Confidence            356789999999999999999999999999999999988776654431                1578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        88 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  166 (277)
T 4dqx_A           88 AESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA-  166 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-
Confidence            877774       79999999996432      222345668899999998888875    445679999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCC-ccccc-cc-ceee---cccCcccCCCCCHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DAYKE-TH-NITL---SQEDTLFGGQVSNL  286 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~-~~~~~-~~-~~~~---~~~~~~~~g~V~v~  286 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++. ..... .. ....   .......+.+.+++
T Consensus       167 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe  241 (277)
T 4dqx_A          167 -----IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE  241 (277)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHH
Confidence                 23456899999999988752       58999999999998864 11100 00 0000   11223344568999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      |||+++++++.+.. +..|+++++.++...
T Consensus       242 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          242 EIAEAMLFLASDRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSSS
T ss_pred             HHHHHHHHHhCCccCCCcCCEEEECCchhh
Confidence            99999999997653 346999999998654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.91  E-value=3e-23  Score=206.55  Aligned_cols=213  Identities=13%  Similarity=0.050  Sum_probs=153.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+.+|+||||||+|+||+++++.|+++|++|++++|+.++....   +.+               .++.++.+|+.|.+
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~---------------~~~~~~~~Dv~~~~   84 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQ---------------AGAVALYGDFSCET   84 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHH---------------HTCEEEECCTTSHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHh---------------cCCeEEECCCCCHH
Confidence            345678999999999999999999999999999999998765332   222               24789999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCcc-----CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~~-----~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++.+++       +++|+||||||......     .++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        85 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-  163 (260)
T 3gem_A           85 GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG-  163 (260)
T ss_dssp             HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC-
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-
Confidence            887776       37899999999653322     2244678999999999988875    346689999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                           ......|+.+|++.+.+++.      .++++++|+||+|.++.........  ........+.+.+.+|+|++++
T Consensus       164 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~~~--~~~~~~p~~r~~~~edva~~v~  236 (260)
T 3gem_A          164 -----SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAYRA--NALAKSALGIEPGAEVIYQSLR  236 (260)
T ss_dssp             -----CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHH
T ss_pred             -----CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHHHH--HHHhcCCCCCCCCHHHHHHHHH
Confidence                 23456899999999988763      4699999999999887432111111  1111222334568999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      ++++... ..|++|+|.++..+
T Consensus       237 ~L~~~~~-itG~~i~vdGG~~~  257 (260)
T 3gem_A          237 YLLDSTY-VTGTTLTVNGGRHV  257 (260)
T ss_dssp             HHHHCSS-CCSCEEEESTTTTT
T ss_pred             HHhhCCC-CCCCEEEECCCccc
Confidence            9996544 57999999998653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.91  E-value=6.3e-24  Score=210.26  Aligned_cols=211  Identities=14%  Similarity=0.097  Sum_probs=155.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++....      .             ..++.++.+|++|.+++
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~-------------~~~~~~~~~D~~~~~~v   67 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD------L-------------GDRARFAAADVTDEAAV   67 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH------T-------------CTTEEEEECCTTCHHHH
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHh------c-------------CCceEEEECCCCCHHHH
Confidence            5678999999999999999999999999999999976533221      1             25789999999999988


Q ss_pred             HHHhC------CCcEEEEcccCCC----------CccCCCCcchHhHHHHHHHHHHHHHhc------------CCCEEEE
Q 009648          158 EPALG------NASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA------------KVNHFIM  209 (530)
Q Consensus       158 ~~a~~------~vD~VI~~Ag~~~----------~~~~~~~~~~~vNv~gt~~Ll~aa~~~------------gv~r~V~  209 (530)
                      +++++      ++|+||||||...          .+..++...+++|+.++.++++++...            +.++||+
T Consensus        68 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~  147 (257)
T 3tl3_A           68 ASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN  147 (257)
T ss_dssp             HHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence            87774      8999999999642          233446678999999999999988742            3458999


Q ss_pred             EcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCccc-CC
Q 009648          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GG  281 (530)
Q Consensus       210 iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~-~g  281 (530)
                      +||......      ......|+.+|++.+.+.+.       .|+++++|+||+|.++................... +.
T Consensus       148 isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r  221 (257)
T 3tl3_A          148 TASVAAFDG------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSR  221 (257)
T ss_dssp             ECCCC--CC------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCS
T ss_pred             EcchhhcCC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCC
Confidence            999876332      23456799999998877652       68999999999999875322111000000111122 45


Q ss_pred             CCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      +.+++|+|+++++++.+. +..|+++++.++..
T Consensus       222 ~~~p~dva~~v~~l~s~~-~itG~~i~vdGG~~  253 (257)
T 3tl3_A          222 LGNPDEYGALAVHIIENP-MLNGEVIRLDGAIR  253 (257)
T ss_dssp             CBCHHHHHHHHHHHHHCT-TCCSCEEEESTTC-
T ss_pred             ccCHHHHHHHHHHHhcCC-CCCCCEEEECCCcc
Confidence            789999999999999984 46799999998864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=3.2e-24  Score=208.78  Aligned_cols=204  Identities=17%  Similarity=0.100  Sum_probs=154.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||++++++|+++|++|++++|+..                         ..++.++.+|+.|.+++.+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-------------------------~~~~~~~~~D~~~~~~~~~   56 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------------GEDLIYVEGDVTREEDVRR   56 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------------SSSSEEEECCTTCHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-------------------------ccceEEEeCCCCCHHHHHH
Confidence            578999999999999999999999999999999864                         1356889999999999888


Q ss_pred             HhC------CCcEEEEcccCCCCcc------C----CCCcchHhHHHHHHHHHHHHHhc----C------CCEEEEEcCC
Q 009648          160 ALG------NASVVICCIGASEKEV------F----DITGPYRIDFQATKNLVDAATIA----K------VNHFIMVSSL  213 (530)
Q Consensus       160 a~~------~vD~VI~~Ag~~~~~~------~----~~~~~~~vNv~gt~~Ll~aa~~~----g------v~r~V~iSS~  213 (530)
                      +++      ++|+||||||......      .    ++...+++|+.++.++++++...    +      .++||++||.
T Consensus        57 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~  136 (242)
T 1uay_A           57 AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV  136 (242)
T ss_dssp             HHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT
T ss_pred             HHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence            886      8899999999643211      1    34566889999999999998753    1      1299999998


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCccc-CCCCCH
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSN  285 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~-~g~V~v  285 (530)
                      .....      ......|+.+|++.+.+++.       .|+++++||||+|+++................... +.++++
T Consensus       137 ~~~~~------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (242)
T 1uay_A          137 AAFEG------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRP  210 (242)
T ss_dssp             HHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCH
T ss_pred             hhccC------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCH
Confidence            65332      23456799999998877652       58999999999999875321110000000111122 456899


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +|+|+++++++.+. ...|++|++.++...
T Consensus       211 ~dva~~~~~l~~~~-~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          211 EEYAALVLHILENP-MLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHHHHHHHHCT-TCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhcCC-CCCCcEEEEcCCeec
Confidence            99999999999984 357899999988654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.91  E-value=1.9e-23  Score=209.84  Aligned_cols=220  Identities=13%  Similarity=0.099  Sum_probs=166.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|++|.++
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~d~~~   95 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-------------GGKALPIRCDVTQPDQ   95 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-------------TCCCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHHH
Confidence            467889999999999999999999999999999999998888877766543             2578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~iSS~~v~~~  218 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .++||++||......
T Consensus        96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~  175 (276)
T 3r1i_A           96 VRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII  175 (276)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence            887774       79999999996532      2223456678999999999888754    33 368999999765332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      ..    ......|+.+|++.+.+++.       .|+++++|+||+|.++........ ..........+.+.+.+|||++
T Consensus       176 ~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~p~~r~~~pedvA~~  250 (276)
T 3r1i_A          176 NI----PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADY-HALWEPKIPLGRMGRPEELTGL  250 (276)
T ss_dssp             CC----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGG-HHHHGGGSTTSSCBCGGGSHHH
T ss_pred             CC----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHH-HHHHHhcCCCCCCcCHHHHHHH
Confidence            11    12456799999999988762       689999999999998754322111 1111122233456889999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++.+. .+..|++++|.++..
T Consensus       251 v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          251 YLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHcCccccCccCcEEEECcCcc
Confidence            99999864 335689999988753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.91  E-value=3.4e-23  Score=207.15  Aligned_cols=222  Identities=14%  Similarity=0.078  Sum_probs=162.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------------chhHHHHHHHHHHhhhhccccccCCCCCCCe
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+            .++...+.+.+...             ..++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   76 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI-------------GSRI   76 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH-------------TCCE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc-------------CCeE
Confidence            3567899999999999999999999999999999997            44455444443332             2589


Q ss_pred             EEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHh----cC-CCEEEEE
Q 009648          145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMV  210 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~r~V~i  210 (530)
                      .++.+|++|.++++++++       ++|+||||||....  ...++...+++|+.++.++++++..    .+ .++||++
T Consensus        77 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  156 (278)
T 3sx2_A           77 VARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI  156 (278)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            999999999998887774       79999999996533  2334567799999999999988653    33 5699999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc------e----eec
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------I----TLS  273 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~------~----~~~  273 (530)
                      ||........  ........|+.+|++.+.+++.       .|+++++|+||+|+++.........      .    ...
T Consensus       157 sS~~~~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T 3sx2_A          157 SSSAGLAGVG--SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA  234 (278)
T ss_dssp             CCGGGTSCCC--CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred             ccHHhcCCCc--cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence            9986533211  1123456799999999988762       6899999999999998543110000      0    000


Q ss_pred             ccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          274 QEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       274 ~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ........+++++|||+++++++.+. .+..|++++|.++.
T Consensus       235 ~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          235 MGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             TSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            11111245689999999999999764 33568999998875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=6.9e-24  Score=212.75  Aligned_cols=221  Identities=16%  Similarity=0.155  Sum_probs=162.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...         + ....++.++.+|+.|.+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~Dv~~~~~v   73 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS---------G-VSEKQVNSVVADVTTEDGQ   73 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------T-CCGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---------C-CCCcceEEEEecCCCHHHH
Confidence            46789999999999999999999999999999999998777765554322         1 0012689999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc----------cCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCcc
Q 009648          158 EPALG-------NASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTN  216 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~----------~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~  216 (530)
                      +++++       ++|+||||||.....          ..++...+++|+.++.++++++..    .+ ++||++||....
T Consensus        74 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~  152 (280)
T 1xkq_A           74 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG  152 (280)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc
Confidence            77764       799999999964321          122456789999999999888764    35 799999998663


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--c------cce-eecccCcccC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T------HNI-TLSQEDTLFG  280 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~------~~~-~~~~~~~~~~  280 (530)
                      ...     ......|+.+|++.+.+++.       .|+++++||||+|+++......  .      ... .........+
T Consensus       153 ~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (280)
T 1xkq_A          153 PQA-----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG  227 (280)
T ss_dssp             SSC-----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS
T ss_pred             CCC-----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCC
Confidence            321     13356799999999887652       6899999999999987432110  0      000 0001112234


Q ss_pred             CCCCHHHHHHHHHHHHhCC--CCCCCcEEEEeCCCC
Q 009648          281 GQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT  314 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~--~~~~g~vynv~~~~~  314 (530)
                      .+.+++|+|+++++++.+.  .+..|++|++.++..
T Consensus       228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence            5689999999999999754  235689999988854

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=6.8e-24  Score=211.98  Aligned_cols=220  Identities=14%  Similarity=0.102  Sum_probs=161.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+...             ..++.++.+|+.|.++
T Consensus        31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~   97 (279)
T 3ctm_A           31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY-------------GVHSKAYKCNISDPKS   97 (279)
T ss_dssp             CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH-------------CSCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcceEEEeecCCHHH
Confidence            356789999999999999999999999999999999987776665544432             1578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-c-------cCCCCcchHhHHHH----HHHHHHHHHhcCCCEEEEEcCCCccC
Q 009648          157 IEPALG-------NASVVICCIGASEK-E-------VFDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-~-------~~~~~~~~~vNv~g----t~~Ll~aa~~~gv~r~V~iSS~~v~~  217 (530)
                      +.++++       .+|+||||||.... .       ..++...+++|+.+    ++++++.+++.+.++||++||..+..
T Consensus        98 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  177 (279)
T 3ctm_A           98 VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI  177 (279)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSC
T ss_pred             HHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhcc
Confidence            887774       49999999996532 1       11234568899999    56777777777888999999986532


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      ..    .......|+.+|++.|.+++.       .+ ++++|+||++.++...................+.+++++|+|+
T Consensus       178 ~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  252 (279)
T 3ctm_A          178 VN----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVG  252 (279)
T ss_dssp             C-------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHH
T ss_pred             CC----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHH
Confidence            21    123456899999999988763       46 9999999999887532110000000001112345789999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++++.+. ....|+++++.++..
T Consensus       253 ~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          253 GYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCccccCccCCEEEECCCee
Confidence            999999764 334689999988753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.91  E-value=4.9e-24  Score=210.26  Aligned_cols=215  Identities=13%  Similarity=0.070  Sum_probs=161.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~   66 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----------------GKKARAIAADISDPGS   66 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----------------CTTEEECCCCTTCHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceEEEEcCCCCHHH
Confidence            356789999999999999999999999999999999988776654432                1578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcC-CCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAK-VNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~g-v~r~V~iSS~~v~~~  218 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.+++++    +++.+ .++||++||......
T Consensus        67 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  146 (247)
T 3rwb_A           67 VKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG  146 (247)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC
Confidence            887774       79999999996532      2233566799999999999888    44555 579999999765322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-ceeecccCcccCCCCCHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                            ......|+.+|++.+.+.+.       .|+++++|+||+|.++........ ...........+.+.+.+|||+
T Consensus       147 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~  220 (247)
T 3rwb_A          147 ------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIAD  220 (247)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHH
T ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHH
Confidence                  23356799999998877652       699999999999987632211100 0000011122345678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++++.+.. +..|+++++.++.
T Consensus       221 ~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          221 VVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            9999998653 3568999998874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.91  E-value=1.2e-23  Score=208.21  Aligned_cols=218  Identities=15%  Similarity=0.100  Sum_probs=155.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+                ..++.++.+|++|.++
T Consensus         6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~   69 (261)
T 3n74_A            6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----------------GDAALAVAADISKEAD   69 (261)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTSHHH
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------------CCceEEEEecCCCHHH
Confidence            456789999999999999999999999999999999998877665432                1578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc----C----CCEEEEEcCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K----VNHFIMVSSLG  214 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g----v~r~V~iSS~~  214 (530)
                      ++++++       ++|+||||||....       +..++...+++|+.++.++++++...    +    ..+||++||..
T Consensus        70 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~  149 (261)
T 3n74_A           70 VDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTG  149 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchh
Confidence            877774       78999999996531       22334567899999998888876532    1    45799999987


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc----cceeecccCcccCCCC
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----HNITLSQEDTLFGGQV  283 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~----~~~~~~~~~~~~~g~V  283 (530)
                      ....      ......|+.+|++.+.+++.       .|+++++|+||++.++.......    ............+.++
T Consensus       150 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (261)
T 3n74_A          150 AGRP------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLL  223 (261)
T ss_dssp             TTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCC
T ss_pred             hcCC------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCc
Confidence            6432      23356799999999988752       68999999999999875322110    0001111223344678


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAETTAP  316 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t  316 (530)
                      +++|+|+++++++.+. ....|+++++.++....
T Consensus       224 ~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred             CHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence            9999999999999654 33569999999987653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.91  E-value=6.6e-24  Score=209.87  Aligned_cols=214  Identities=12%  Similarity=0.014  Sum_probs=156.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.+  ..+.+.+...             ..++.++.+|+.|.+++.
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-------------~~~~~~~~~D~~~~~~v~   67 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-------------GVKAVHHPADLSDVAQIE   67 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-------------SCCEEEECCCTTSHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-------------CCceEEEeCCCCCHHHHH
Confidence            4689999999999999999999999999999999876  3333333211             246889999999999988


Q ss_pred             HHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc
Q 009648          159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++       ++|+||||||....      +..++...+++|+.++.+++++    +++.+.++||++||......   
T Consensus        68 ~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  144 (255)
T 2q2v_A           68 ALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG---  144 (255)
T ss_dssp             HHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC---
Confidence            8775       89999999996432      2223456789999977666555    45677789999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cce--------eec-ccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNI--------TLS-QEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~~--------~~~-~~~~~~~g~V  283 (530)
                         ......|+.+|++.+.+.+.       .|+++++||||+|+++.......  ...        ... ......+.++
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  221 (255)
T 2q2v_A          145 ---STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFV  221 (255)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCB
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCc
Confidence               12356799999999987763       58999999999999875321100  000        000 1122234578


Q ss_pred             CHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++|||+++++++.+.. ...|++|++.++.
T Consensus       222 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          222 TPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            99999999999997643 3458999998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.5e-23  Score=209.81  Aligned_cols=208  Identities=19%  Similarity=0.217  Sum_probs=151.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+...         +  ...++.++.+|+.|.+++
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~--~~~~~~~~~~Dl~~~~~v   98 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA---------G--YPGTLIPYRCDLSNEEDI   98 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T--CSSEEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc---------C--CCceEEEEEecCCCHHHH
Confidence            46789999999999999999999999999999999988777766555432         1  124688999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHH----HHHHHHHHHhcCC--CEEEEEcCCCccCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQA----TKNLVDAATIAKV--NHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~g----t~~Ll~aa~~~gv--~r~V~iSS~~v~~~  218 (530)
                      .++++       ++|+||||||....      ...++...+++|+.+    ++++++.+++.++  ++||++||..+...
T Consensus        99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~  178 (279)
T 1xg5_A           99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV  178 (279)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence            77764       79999999996432      122345678999999    6677777777775  79999999876321


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCccc-ccccceeecccCcccCCCCCHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~-~~~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                          ........|+.+|++++.+++         ..|+++++|+||+|.++.... ......... .......+++++|+
T Consensus       179 ----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~dv  253 (279)
T 1xg5_A          179 ----LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA-ATYEQMKCLKPEDV  253 (279)
T ss_dssp             ----CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH-HHHC---CBCHHHH
T ss_pred             ----CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHh-hhcccccCCCHHHH
Confidence                113345689999999887654         358999999999998874211 000000000 01112346899999


Q ss_pred             HHHHHHHHhCCCC
Q 009648          289 AELLACMAKNRSL  301 (530)
Q Consensus       289 A~ai~~ll~~~~~  301 (530)
                      |+++++++.++..
T Consensus       254 A~~i~~l~~~~~~  266 (279)
T 1xg5_A          254 AEAVIYVLSTPAH  266 (279)
T ss_dssp             HHHHHHHHHSCTT
T ss_pred             HHHHHHHhcCCcc
Confidence            9999999998763

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.91  E-value=2.5e-24  Score=215.58  Aligned_cols=219  Identities=13%  Similarity=0.083  Sum_probs=166.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.++
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~   89 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-------------GHDAEAVAFDVTSESE   89 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-------------TCCEEECCCCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence            456889999999999999999999999999999999998888777666543             2578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        90 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~-  168 (271)
T 4ibo_A           90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA-  168 (271)
T ss_dssp             HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-
Confidence            887774       79999999996432      2234566799999999999777653    46679999999765332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc-c-eeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~-~-~~~~~~~~~~~g~V~v~DVA~  290 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||+|.++........ . ..........+.+.+++|||+
T Consensus       169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~  243 (271)
T 4ibo_A          169 -----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVG  243 (271)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                 23456799999999988762       689999999999998743221100 0 000111223345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++++.+. .+..|++++|.++..
T Consensus       244 ~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          244 TAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhCccccCCCCcEEEECCCee
Confidence            999999764 335689999988753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.91  E-value=2.3e-23  Score=210.97  Aligned_cols=220  Identities=14%  Similarity=0.108  Sum_probs=162.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ...++|+||||||+|+||+++++.|+++|++|++++|+.  ...+.+.+.+++.             ..++.++.+|+.|
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d  111 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC-------------GRKAVLLPGDLSD  111 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT-------------TCCEEECCCCTTS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc-------------CCcEEEEEecCCC
Confidence            345789999999999999999999999999999999873  3344444333322             2578999999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNK  217 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~  217 (530)
                      .+++++++       +++|+||||||....       +..++...+++|+.++.++++++...-  .++||++||.....
T Consensus       112 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~  191 (294)
T 3r3s_A          112 ESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ  191 (294)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc
Confidence            98877766       479999999996421       223346679999999999999998753  35999999987643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc--cccceeecccCcccCCCCCHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~--~~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      .      ......|+.+|++.+.+.+.       .|+++++|+||+|+++.....  ....+.........+.+.+.+||
T Consensus       192 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  265 (294)
T 3r3s_A          192 P------SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAEL  265 (294)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGG
T ss_pred             C------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHH
Confidence            2      23456799999999988752       599999999999998641110  00111111122333456889999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      |+++++++.+. .+..|++++|.++..
T Consensus       266 A~~v~~L~s~~~~~itG~~i~vdGG~~  292 (294)
T 3r3s_A          266 APVYVYLASQESSYVTAEVHGVCGGEH  292 (294)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999764 335699999998864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.91  E-value=2e-23  Score=206.67  Aligned_cols=203  Identities=12%  Similarity=0.043  Sum_probs=145.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..             ..++.++.+|++|.+++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   71 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-------------GGRIVARSLDARNEDEV   71 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-------------TCEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEECcCCCHHHH
Confidence            45789999999999999999999999999999999999988887766543             25789999999999998


Q ss_pred             HHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .++++      ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......   
T Consensus        72 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  148 (252)
T 3h7a_A           72 TAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG---  148 (252)
T ss_dssp             HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC---
T ss_pred             HHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC---
Confidence            88775      78999999996432      222345678999999988888764    456679999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCE-EEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPY-TIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~-tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                         ......|+.+|++.+.+.+.       .|+++ ++|+||+|.++................... ++++.+|+|++++
T Consensus       149 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~pedvA~~~~  224 (252)
T 3h7a_A          149 ---GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPD-LLMPPAAVAGAYW  224 (252)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHH
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCc-cCCCHHHHHHHHH
Confidence               23456799999999877652       68999 899999998874322111110001111112 3789999999999


Q ss_pred             HHHhCCC
Q 009648          294 CMAKNRS  300 (530)
Q Consensus       294 ~ll~~~~  300 (530)
                      +++.++.
T Consensus       225 ~l~s~~~  231 (252)
T 3h7a_A          225 QLYQQPK  231 (252)
T ss_dssp             HHHHCCG
T ss_pred             HHHhCch
Confidence            9999765

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.91  E-value=1.8e-23  Score=206.37  Aligned_cols=208  Identities=13%  Similarity=0.112  Sum_probs=148.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.+. .                  .    .++.++.+|+.|.+++
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~------------------~----~~~~~~~~D~~d~~~~   61 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-E------------------Q----YPFATEVMDVADAAQV   61 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-S------------------C----CSSEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-h------------------c----CCceEEEcCCCCHHHH
Confidence            457899999999999999999999999999999998641 0                  0    1378899999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......  
T Consensus        62 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--  139 (250)
T 2fwm_X           62 AQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP--  139 (250)
T ss_dssp             HHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC--
Confidence            87774       79999999996432      22234567899999999998887    4557789999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccce---eecc------cCcccCCCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI---TLSQ------EDTLFGGQV  283 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~---~~~~------~~~~~~g~V  283 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+|+++...... ....   .+..      .....+.++
T Consensus       140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (250)
T 2fwm_X          140 ----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIA  215 (250)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCc
Confidence                23456799999999988763       5999999999999987532110 0000   0000      011223468


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++|||+++++++.+. ....|+++++.++..
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          216 RPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            8999999999999864 335689999988753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.9e-23  Score=208.90  Aligned_cols=222  Identities=14%  Similarity=0.140  Sum_probs=162.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+++||||||+|+||++++++|+++|++|++++|+.++...+.+++...        .......++.++.+|+.|.+++
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~D~~~~~~v   87 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQAN--------LPPTKQARVIPIQCNIRNEEEV   87 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------SCTTCCCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--------ccccCCccEEEEecCCCCHHHH
Confidence            55789999999999999999999999999999999988777766655431        0001135799999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      ...++...+++|+.++.++++++..    .+.++||++||...  .+.
T Consensus        88 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~  165 (303)
T 1yxm_A           88 NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGF  165 (303)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cCC
Confidence            87774       59999999995422      1123455689999999999999765    24579999999872  221


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCC--ccccc-cccee-ecccCcccCCCCCHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT--DAYKE-THNIT-LSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~--~~~~~-~~~~~-~~~~~~~~~g~V~v~DVA  289 (530)
                           .....|+.+|...+.+.+.       .|+++++||||+|+|+.  ..... ..... ........+.+++++|+|
T Consensus       166 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  240 (303)
T 1yxm_A          166 -----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS  240 (303)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred             -----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHH
Confidence                 2345799999998877652       48999999999999984  22110 00000 000111224568999999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++++++.+.. ...|++|++.++..
T Consensus       241 ~~i~~l~~~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          241 SVVCFLLSPAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCcccccCCCcEEEECCCee
Confidence            99999997642 34689999998854

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=3.8e-24  Score=210.47  Aligned_cols=213  Identities=15%  Similarity=0.107  Sum_probs=157.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.                  ...++.++.+|++|.+++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~~   65 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE------------------KYPGIQTRVLDVTKKKQI   65 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG------------------GSTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------------------hccCceEEEeeCCCHHHH
Confidence            45789999999999999999999999999999999876544321                  013789999999999888


Q ss_pred             HHH---hCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPA---LGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a---~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +++   ++++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||........    
T Consensus        66 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  141 (246)
T 2ag5_A           66 DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----  141 (246)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----
T ss_pred             HHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----
Confidence            766   4679999999996532      122345668899999999988875    45678999999986633211    


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----cc-eeecccCcccCCCCCHHHHHHH
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HN-ITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~~-~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                       .....|+.+|++.+.+++.       .|+++++||||+|+++.......     .. ..........+.+++++|+|++
T Consensus       142 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  220 (246)
T 2ag5_A          142 -VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAML  220 (246)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHH
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence             1356799999999988763       59999999999999874321000     00 0000011123456899999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +++++.+.. +..|+++++.++.
T Consensus       221 v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          221 CVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHhCccccCCCCCEEEECCCc
Confidence            999997643 3468999988873

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.91  E-value=3.1e-23  Score=202.77  Aligned_cols=206  Identities=12%  Similarity=0.081  Sum_probs=156.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +|+||||||+|+||+++++.|+++|+       +|++++|+.++...+.+++...             ..++.++.+|+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~   68 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-------------GALTDTITADIS   68 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-------------TCEEEEEECCTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-------------CCeeeEEEecCC
Confidence            57899999999999999999999999       9999999988777665544321             257899999999


Q ss_pred             CHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCc
Q 009648          153 KRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT  215 (530)
Q Consensus       153 d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v  215 (530)
                      |.+++.++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||..+
T Consensus        69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  148 (244)
T 2bd0_A           69 DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  148 (244)
T ss_dssp             SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh
Confidence            9988887774       79999999996532      222345678999999999988875    356789999999876


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DV  288 (530)
                      ...      ......|+.+|++.+.+++       ..|+++++||||+|+++.......       ..  ...+++++|+
T Consensus       149 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~--~~~~~~~~dv  213 (244)
T 2bd0_A          149 TKA------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------EM--QALMMMPEDI  213 (244)
T ss_dssp             TSC------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------TT--GGGSBCHHHH
T ss_pred             cCC------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------cc--cccCCCHHHH
Confidence            432      2345679999999998764       268999999999999985422110       00  1246899999


Q ss_pred             HHHHHHHHhCCCC-CCCcEEEEeCCC
Q 009648          289 AELLACMAKNRSL-SYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~~~-~~g~vynv~~~~  313 (530)
                      |+++++++.++.. ..++++.+.++.
T Consensus       214 a~~~~~l~~~~~~~~~g~~~~~~~~~  239 (244)
T 2bd0_A          214 AAPVVQAYLQPSRTVVEEIILRPTSG  239 (244)
T ss_dssp             HHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             HHHHHHHHhCCccccchheEEecccc
Confidence            9999999987642 235555555543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=2.9e-23  Score=204.34  Aligned_cols=212  Identities=16%  Similarity=0.088  Sum_probs=156.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+              .    -++.++.+|++|.+++
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--------------~----~~~~~~~~D~~~~~~~   64 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAE--------------A----VGAHPVVMDVADPASV   64 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH--------------T----TTCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------------H----cCCEEEEecCCCHHHH
Confidence            456899999999999999999999999999999999876665432              0    1378899999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||.. . .+.
T Consensus        65 ~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~-~~~  142 (245)
T 1uls_A           65 ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-Y-LGN  142 (245)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-G-GCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-h-cCC
Confidence            77664       58999999996432      1223456789999999999888764    3668999999987 2 222


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                           .....|+.+|+..+.+.+.       .|+++++|+||+|.++...................+.+++++|+|++++
T Consensus       143 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  217 (245)
T 1uls_A          143 -----LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL  217 (245)
T ss_dssp             -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHH
Confidence                 2346799999998877652       6899999999999887532110000000001112345689999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++.+. .+..|+++.+.++..
T Consensus       218 ~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          218 FLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhCchhcCCcCCEEEECCCcc
Confidence            999764 235689999988753

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.91  E-value=8e-24  Score=208.81  Aligned_cols=219  Identities=16%  Similarity=0.116  Sum_probs=159.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+++||||||+|+||++++++|+++|++|++++ |+..+...+.+.+...             ..++.++.+|+.|.+
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~   76 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL-------------GFDFYASEGNVGDWD   76 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT-------------TCCCEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCeeEEEecCCCCHH
Confidence            45678999999999999999999999999999988 6666666555544432             257899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......
T Consensus        77 ~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  156 (256)
T 3ezl_A           77 STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG  156 (256)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC
Confidence            8877774       78999999996532      22234567999999988877665    4567789999999866432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+++.       .|+++++|+||+|.++...................+.+.+.+|+|++
T Consensus       157 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  230 (256)
T 3ezl_A          157 ------QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSI  230 (256)
T ss_dssp             ------CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             ------CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                  23456899999998877652       68999999999998764321110000000111223456789999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++.+. ....|++|++.++..
T Consensus       231 ~~~l~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          231 VAWLASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHHhCCcccCCcCcEEEECCCEe
Confidence            99999754 335689999988754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-23  Score=209.82  Aligned_cols=216  Identities=15%  Similarity=0.114  Sum_probs=160.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.++   .              .++.++.+|+.|.+++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~--------------~~~~~~~~Dv~d~~~v   69 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE---L--------------PGAVFILCDVTQEDDV   69 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--------------TTEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h--------------cCCeEEEcCCCCHHHH
Confidence            4578999999999999999999999999999999998776654331   1              3578999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....       +..++...+++|+.++.++++++...   +.++||++||......  
T Consensus        70 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--  147 (270)
T 1yde_A           70 KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG--  147 (270)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC--
Confidence            87764       78999999996431       11224567899999999999888631   3479999999754221  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cc----eeecccCcccCCCCCHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HN----ITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~----~~~~~~~~~~~g~V~v~D  287 (530)
                          ......|+.+|++.+.+.+.       .|+++++||||+|+++.......  ..    +.........+.+.+.+|
T Consensus       148 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  223 (270)
T 1yde_A          148 ----QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE  223 (270)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHH
T ss_pred             ----CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHH
Confidence                12346799999999988763       68999999999999874211000  00    000001122345678999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCC
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAP  316 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t  316 (530)
                      ||+++++++.+..+..|+++++.++....
T Consensus       224 va~~v~~L~s~~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          224 VGAAAVFLASEANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HHHHHHHHHHHCTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHHHcccCCCcCCCEEEECCCeecc
Confidence            99999999987555679999999986543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.91  E-value=1.1e-23  Score=211.27  Aligned_cols=219  Identities=12%  Similarity=0.092  Sum_probs=164.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+|+||+++++.|+++|++|++++|+.++...+.+++...            ...++.++.+|++|.++
T Consensus        24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~   91 (277)
T 4fc7_A           24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA------------TGRRCLPLSMDVRAPPA   91 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH------------HSSCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh------------cCCcEEEEEcCCCCHHH
Confidence            467889999999999999999999999999999999988877766555332            02578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        92 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-  170 (277)
T 4fc7_A           92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG-  170 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-
Confidence            877763       79999999995432      223355679999999999999874    345579999999865322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--c-cceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--T-HNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~-~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++......  . ............+.+.+.+|||
T Consensus       171 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  245 (277)
T 4fc7_A          171 -----QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIA  245 (277)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHH
Confidence                 22346799999999987762       5899999999999987321100  0 0000111122344568999999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++++.+. .+..|++++|.++.
T Consensus       246 ~~v~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          246 HSVLYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHcCCccCCcCCCEEEECCCc
Confidence            9999999864 34579999998874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=2.1e-23  Score=207.23  Aligned_cols=221  Identities=13%  Similarity=0.058  Sum_probs=156.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+|+||||||+|+||+++++.|+++|++|+++ .|+.+......++++..             ..++.++.+|++|.+
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~   71 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL-------------GRSALAIKADLTNAA   71 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT-------------TSCCEEEECCTTCHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCceEEEEcCCCCHH
Confidence            4568899999999999999999999999999998 45555555555544332             257899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCC-CC------ccCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccCCC
Q 009648          156 QIEPALG-------NASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~-~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~~~  219 (530)
                      +++++++       ++|+||||||.. ..      +..++...+++|+.++.++++++...-  .++||++||......+
T Consensus        72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  151 (259)
T 3edm_A           72 EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG  151 (259)
T ss_dssp             HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC
Confidence            8887774       789999999854 11      222245678999999999999998752  3489999997653111


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+.      .+++++.|+||+|.++......... ..........+.+.+++|+|+++
T Consensus       152 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v  226 (259)
T 3edm_A          152 -----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLV  226 (259)
T ss_dssp             -----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 23356799999999988762      3499999999999887532211111 11111122334567899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      ++++.+. .+..|++|++.++...
T Consensus       227 ~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          227 AFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             HHHcCccccCccCCEEEECCCcCC
Confidence            9999765 3346999999988653

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.91  E-value=9.8e-24  Score=209.50  Aligned_cols=218  Identities=11%  Similarity=0.086  Sum_probs=158.3

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|+||||||+  |+||+++++.|+++|++|++++|+.. .....+.+.+.             .+.+.++.+|++|.+
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   71 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA-------------LGGALLFRADVTQDE   71 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH-------------TTCCEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh-------------cCCcEEEECCCCCHH
Confidence            457899999999  99999999999999999999999875 22222222221             134789999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      +++++++       ++|+||||||....          +..++...+++|+.++.++++++...  +.++||++||.+..
T Consensus        72 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  151 (261)
T 2wyu_A           72 ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE  151 (261)
T ss_dssp             HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence            8877764       78999999996431          22234567899999999999999865  22599999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ......|+.+|++.+.+++.       .|+++++||||+|+++....... ... .........+.+.+++|
T Consensus       152 ~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d  225 (261)
T 2wyu_A          152 KV------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE  225 (261)
T ss_dssp             SB------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             CC------CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHH
Confidence            32      22346799999999988753       59999999999999975321110 000 00001112344678999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +|+++++++.+.. ...|++|++.++...
T Consensus       226 va~~v~~l~s~~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          226 VGNLGLFLLSPLASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCccc
Confidence            9999999997542 346889999988543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.91  E-value=7.4e-23  Score=204.90  Aligned_cols=218  Identities=17%  Similarity=0.172  Sum_probs=163.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+. .+.+.+.+++++.             ..++.++.+|+.|.+
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~   94 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA-------------GGRAVAIRADNRDAE   94 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence            35678999999999999999999999999999997764 5555555554432             257899999999999


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++...  +.++||++||......+ 
T Consensus        95 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~-  173 (271)
T 3v2g_A           95 AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP-  173 (271)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC-
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC-
Confidence            8887774       79999999996432      22335667999999999999999865  45699999996543221 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+.+.       .|+++++|+||+|.++........ ..........+.+.+.+|||++++
T Consensus       174 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~r~~~pedvA~~v~  248 (271)
T 3v2g_A          174 ----WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH-AEAQRERIATGSYGEPQDIAGLVA  248 (271)
T ss_dssp             ----STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS-HHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh-HHHHHhcCCCCCCCCHHHHHHHHH
Confidence                23456799999999988652       589999999999998754321110 000111223345678999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++.+. .+..|++++|.++.
T Consensus       249 fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          249 WLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhCcccCCccCCEEEeCcCc
Confidence            999754 34579999998874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=8.4e-24  Score=210.79  Aligned_cols=214  Identities=13%  Similarity=0.078  Sum_probs=159.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.++   +             ..++.++.+|++|.+++
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~D~~~~~~v   67 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---L-------------EAEAIAVVADVSDPKAV   67 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C-------------CSSEEEEECCTTSHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---h-------------cCceEEEEcCCCCHHHH
Confidence            4578999999999999999999999999999999998776654321   1             14688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccCCCCcc
Q 009648          158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~~~~~~  222 (530)
                      +++++       ++|+||||||.....      ..++...+++|+.++.++++++...-  .++||++||....  +   
T Consensus        68 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~--~---  142 (263)
T 2a4k_A           68 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL--G---  142 (263)
T ss_dssp             HHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC--C---
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc--C---
Confidence            77664       689999999964321      22245678999999999999987642  4699999998764  2   


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|+.+|++.+.+.+.       .|+++++||||+|.++...................+.+++.+|+|++++++
T Consensus       143 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l  220 (263)
T 2a4k_A          143 --AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL  220 (263)
T ss_dssp             --HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred             --CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              22356799999988877652       689999999999998743211000000000111234568999999999999


Q ss_pred             HhCCC-CCCCcEEEEeCCCC
Q 009648          296 AKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       296 l~~~~-~~~g~vynv~~~~~  314 (530)
                      +.+.. +..|+++++.++..
T Consensus       221 ~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          221 LSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hCccccCCcCCEEEECCCcc
Confidence            97643 34688999988854

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.91  E-value=4.9e-23  Score=203.34  Aligned_cols=210  Identities=16%  Similarity=0.108  Sum_probs=151.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++                ..++.++.+|++|.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v~~~   64 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----------------GDNLYIAQLDVRNRAAIEEM   64 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------cCceEEEEcCCCCHHHHHHH
Confidence            57999999999999999999999999999999987766554322                14689999999999998888


Q ss_pred             hC-------CCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          161 LG-------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       ++|+||||||... .      +..++...+++|+.++.++++++.    +.+.++||++||......    
T Consensus        65 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----  140 (248)
T 3asu_A           65 LASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----  140 (248)
T ss_dssp             HHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC----
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC----
Confidence            74       6899999999642 1      122345679999999998888875    456789999999866332    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCccc-CCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~-Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                        ......|+.+|++.+.+.+.       .|+++++|+||+|. ++......................++.+|+|+++++
T Consensus       141 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~  218 (248)
T 3asu_A          141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW  218 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHH
Confidence              23356799999999988753       58999999999999 554211000000000000001124789999999999


Q ss_pred             HHhCCCCCCCcEEEEeCC
Q 009648          295 MAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~  312 (530)
                      ++.+.....++.+.+...
T Consensus       219 l~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          219 VSTLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHHSCTTCCCCEEEECCT
T ss_pred             HhcCCccceeeEEEEccc
Confidence            999876566777777654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.91  E-value=9.5e-24  Score=208.64  Aligned_cols=213  Identities=15%  Similarity=0.137  Sum_probs=156.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++                ..++.++.+|+.|.+++
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~v   67 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----------------GERSMFVRHDVSSEADW   67 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----------------CTTEEEECCCTTCHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------------CCceEEEEccCCCHHHH
Confidence            45789999999999999999999999999999999987766554322                14689999999999887


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++.++    +++.+ ++||++||......  
T Consensus        68 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--  144 (253)
T 1hxh_A           68 TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLP--  144 (253)
T ss_dssp             HHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCC--
Confidence            77663       57999999996532      1223456689998887766655    44556 89999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------C--CCCEEEEEcCcccCCCccccccccee---ecc--cCcccCCCCCHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAYKETHNIT---LSQ--EDTLFGGQVSNL  286 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~--gl~~tIvRPg~V~Gp~~~~~~~~~~~---~~~--~~~~~~g~V~v~  286 (530)
                          ......|+.+|++.+.+++.       .  |+++++||||+|+++...........   +..  .....+.+.+++
T Consensus       145 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  220 (253)
T 1hxh_A          145 ----IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH
Confidence                23456799999999987763       3  99999999999998753211000000   100  012234568999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |+|+++++++.++. ...|+++++.++.
T Consensus       221 dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          221 RIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999999998653 3468899998875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.90  E-value=1.4e-23  Score=209.69  Aligned_cols=198  Identities=15%  Similarity=0.140  Sum_probs=148.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++++.+                   ...++.++.+|++|.+++
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dv~d~~~v   74 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------------------NLPNTLCAQVDVTDKYTF   74 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------------------CCTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------------------hcCCceEEEecCCCHHHH
Confidence            4578999999999999999999999999999999997654432                   124789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||..+...  
T Consensus        75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~--  152 (266)
T 3p19_A           75 DTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKT--  152 (266)
T ss_dssp             HHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCC--
Confidence            77774       78999999996532      222345668999999999777654    567789999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee--ecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~--~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|++.+.+.+.       .|+++++|+||+|.++...........  ........+.+++++|||++
T Consensus       153 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~a  228 (266)
T 3p19_A          153 ----FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARA  228 (266)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHH
Confidence                23356799999999877652       699999999999998753221111000  00001123567899999999


Q ss_pred             HHHHHhCCC
Q 009648          292 LACMAKNRS  300 (530)
Q Consensus       292 i~~ll~~~~  300 (530)
                      +++++.++.
T Consensus       229 v~~l~~~~~  237 (266)
T 3p19_A          229 VLFAYQQPQ  237 (266)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHHcCCC
Confidence            999999876

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.90  E-value=4.7e-23  Score=205.19  Aligned_cols=221  Identities=16%  Similarity=0.128  Sum_probs=165.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...           ....++.++.+|++|.++
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~~~   73 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR-----------FPGARLFASVCDVLDALQ   73 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------STTCCEEEEECCTTCHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------cCCceEEEEeCCCCCHHH
Confidence            456789999999999999999999999999999999998888777666542           011358999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +.+++       +++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  152 (265)
T 3lf2_A           74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP-  152 (265)
T ss_dssp             HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC-
Confidence            77766       478999999996432      2223456799999999999998753    45679999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc------c---e---eecccCcccC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH------N---I---TLSQEDTLFG  280 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~------~---~---~~~~~~~~~~  280 (530)
                           ......|+.+|++.+.+.+.       .|++++.|+||+|.++........      .   +   .........+
T Consensus       153 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (265)
T 3lf2_A          153 -----EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG  227 (265)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC
T ss_pred             -----CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC
Confidence                 23356899999999987752       589999999999988632111000      0   0   0000012345


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .+.+.+|||+++++++.+. .+..|+++++.++..
T Consensus       228 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          228 RLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            5688999999999999764 335689999988753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.90  E-value=8.2e-23  Score=202.95  Aligned_cols=198  Identities=20%  Similarity=0.213  Sum_probs=149.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..+++++.+|++|.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~   91 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-------------GGEAESHACDLSHSD   91 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCEEEEEECCTTCHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-------------CCceeEEEecCCCHH
Confidence            3466789999999999999999999999999999999998888777665543             257899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCC-------CccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccC
Q 009648          156 QIEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~-------~~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~  217 (530)
                      ++.+++       +.+|+||||||...       .+..++...+++|+.++.++++++.    +.+.++||++||..+..
T Consensus        92 ~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  171 (262)
T 3rkr_A           92 AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN  171 (262)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC
Confidence            887766       36899999999621       1222345678999999999888864    45678999999987643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .      ......|+.+|++.+.+++.       .|+++++|+||+|.++......        .......+++.+|||+
T Consensus       172 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~p~dvA~  237 (262)
T 3rkr_A          172 P------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------AKKSALGAIEPDDIAD  237 (262)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHHH
T ss_pred             C------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------cccccccCCCHHHHHH
Confidence            2      23456799999999887652       6899999999999876432110        1112235689999999


Q ss_pred             HHHHHHhCCC
Q 009648          291 LLACMAKNRS  300 (530)
Q Consensus       291 ai~~ll~~~~  300 (530)
                      ++++++.+..
T Consensus       238 ~v~~l~s~~~  247 (262)
T 3rkr_A          238 VVALLATQAD  247 (262)
T ss_dssp             HHHHHHTCCT
T ss_pred             HHHHHhcCcc
Confidence            9999998765

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.90  E-value=5.1e-23  Score=202.83  Aligned_cols=202  Identities=16%  Similarity=0.179  Sum_probs=150.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.+++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~~~~~~   71 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA-------------GAKVHVLELDVADRQGV   71 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHHH
Confidence            45789999999999999999999999999999999988877766555432             15789999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+ ++||++||......  
T Consensus        72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--  148 (247)
T 2jah_A           72 DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN--  148 (247)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC--
Confidence            7766       379999999996432      122345668999999999988875    346 79999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCC--CCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG--QVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g--~V~v~DVA~a  291 (530)
                          ......|+.+|++.+.+.+       ..|+++++|+||+|.++.................. +.  +++.+|+|++
T Consensus       149 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~  223 (247)
T 2jah_A          149 ----VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEA  223 (247)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHH
T ss_pred             ----CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHH
Confidence                2235679999999887765       26999999999999887432111000000000000 12  3899999999


Q ss_pred             HHHHHhCCC
Q 009648          292 LACMAKNRS  300 (530)
Q Consensus       292 i~~ll~~~~  300 (530)
                      +++++.++.
T Consensus       224 v~~l~s~~~  232 (247)
T 2jah_A          224 VRYAVTAPH  232 (247)
T ss_dssp             HHHHHHSCT
T ss_pred             HHHHhCCCc
Confidence            999998765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=3.3e-23  Score=209.48  Aligned_cols=219  Identities=12%  Similarity=0.079  Sum_probs=162.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHH-HHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~-l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+..+... +.+.++..             ..++.++.+|+.|.+
T Consensus        44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~  110 (291)
T 3ijr_A           44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-------------GVKCVLLPGDLSDEQ  110 (291)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-------------TCCEEEEESCTTSHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCcEEEEECCCCCHH
Confidence            4568899999999999999999999999999999998764332 22222211             257999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~  219 (530)
                      +++++++       ++|+||||||....       +..++...+++|+.++.++++++...  +.++||++||...... 
T Consensus       111 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-  189 (291)
T 3ijr_A          111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG-  189 (291)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC-
Confidence            8877764       78999999996421       22335677999999999999999875  3469999999865332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                           ......|+.+|++.+.+++.       .|+++++|+||+|+++....... ............+.+.+++|||++
T Consensus       190 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  264 (291)
T 3ijr_A          190 -----NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPA  264 (291)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence                 22356799999999987752       58999999999999874211100 001111122334556889999999


Q ss_pred             HHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          292 LACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       292 i~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++++.+.. +..|+++++.++..
T Consensus       265 v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          265 YVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             HHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             HHHHhCCccCCCcCCEEEECCCcc
Confidence            999997653 35689999988754

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.90  E-value=3.7e-23  Score=207.70  Aligned_cols=219  Identities=16%  Similarity=0.120  Sum_probs=160.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+..+ .+.+.+.+...             ..++.++.+|+.|.+
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~   92 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-------------GSDAACVKANVGVVE   92 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh-------------CCCeEEEEcCCCCHH
Confidence            3567899999999999999999999999999999998754 34433333322             257899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      ++.+++       +++|+||||||....      +..++...+++|+.++.++++++...  +.++||++||....... 
T Consensus        93 ~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-  171 (283)
T 1g0o_A           93 DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA-  171 (283)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC-
Confidence            877665       478999999996532      22335667999999999999999876  66799999997653221 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc----------cce-eeccc--CcccC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET----------HNI-TLSQE--DTLFG  280 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~----------~~~-~~~~~--~~~~~  280 (530)
                          ......|+.+|++.+.+++.       .|+++++|+||+|.++.......          ... .....  ....+
T Consensus       172 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  247 (283)
T 1g0o_A          172 ----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR  247 (283)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCC
Confidence                11256799999999988752       68999999999998864211000          000 00000  12234


Q ss_pred             CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .+.+.+|||+++++++.+. .+..|+++++.++.
T Consensus       248 r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          248 RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            5689999999999999764 33568899988874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.90  E-value=9.2e-24  Score=210.01  Aligned_cols=217  Identities=12%  Similarity=0.089  Sum_probs=158.0

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|+||||||+  |+||+++++.|+++|++|++++|+. +.....+.+...         .    +.+.++.+|++|.+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~   72 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---------L----GSDIVLQCDVAEDA   72 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---------T----TCCCEEECCTTCHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---------c----CCcEEEEccCCCHH
Confidence            456899999999  9999999999999999999999987 333333333221         0    23478899999999


Q ss_pred             hHHHHhC-------CCcEEEEcccCCC-----------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          156 QIEPALG-------NASVVICCIGASE-----------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~-----------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      +++++++       ++|+||||||...           .+..++...+++|+.++.++++++...  +.++||++||...
T Consensus        73 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  152 (265)
T 1qsg_A           73 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  152 (265)
T ss_dssp             HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh
Confidence            8887774       6899999999653           222335667999999999999999865  2259999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|++.+.+++.       .|+++++||||+|+++....... ... .........+.+++++
T Consensus       153 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  226 (265)
T 1qsg_A          153 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  226 (265)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH
Confidence            332      22345799999999988763       48999999999999985432110 000 0000111234568999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      |+|+++++++.+.. ...|++|++.++..
T Consensus       227 dva~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          227 DVGNSAAFLCSDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECCCcC
Confidence            99999999997642 34688999998854

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.90  E-value=5e-23  Score=204.74  Aligned_cols=218  Identities=15%  Similarity=0.084  Sum_probs=166.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++++++.++++..         |    .++.++.+|++|.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~---------g----~~~~~~~~Dvt~~~~   70 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM---------G----KEVLGVKADVSKKKD   70 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence            467899999999999999999999999999999999999988888777654         2    578999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       +++|++|||||....       +..+|...+++|+.++.++.+++.    +++.++||++||......
T Consensus        71 v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~  150 (254)
T 4fn4_A           71 VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG  150 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC
Confidence            87766       578999999995421       223466779999999888777654    557789999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce---eecccCcccCCCCCHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI---TLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~---~~~~~~~~~~g~V~v~D  287 (530)
                            ......|+.+|+.+..+.+       .+||+++.|.||+|.++....... ...   .........+.+...+|
T Consensus       151 ------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~ped  224 (254)
T 4fn4_A          151 ------GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPED  224 (254)
T ss_dssp             ------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHH
T ss_pred             ------CCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHH
Confidence                  1234579999999887766       279999999999998774221110 000   00111122345678999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ||+++++|+.+.. +..|+++.|.++.
T Consensus       225 iA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          225 IANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            9999999997653 4578999888873

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.90  E-value=2.9e-23  Score=206.92  Aligned_cols=222  Identities=13%  Similarity=0.132  Sum_probs=164.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...           .....+.++.+|+.|.+++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~D~~~~~~~   76 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ-----------YPDAILQPVVADLGTEQGC   76 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----------CTTCEEEEEECCTTSHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEecCCCCHHHH
Confidence            56789999999999999999999999999999999998887776665543           1124678899999999888


Q ss_pred             HHHhC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcccc
Q 009648          158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +++++   ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......      
T Consensus        77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------  150 (267)
T 3t4x_A           77 QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP------  150 (267)
T ss_dssp             HHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC------
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC------
Confidence            77764   78999999996532      12234556899999977776665    4466779999999876432      


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----cccee--------e--cccCcccCCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----THNIT--------L--SQEDTLFGGQ  282 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----~~~~~--------~--~~~~~~~~g~  282 (530)
                      ......|+.+|++.+.+.+.       .|++++.|+||++.++......     .....        +  .......+.+
T Consensus       151 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  230 (267)
T 3t4x_A          151 SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRL  230 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCc
Confidence            23456899999999988763       5799999999999876321100     00000        0  0011223567


Q ss_pred             CCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCC
Q 009648          283 VSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAP  316 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t  316 (530)
                      .+++|||+++++++.+. .+..|++++|.++...+
T Consensus       231 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          231 IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             cCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            89999999999999864 33569999999986543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.90  E-value=1.1e-23  Score=208.98  Aligned_cols=226  Identities=13%  Similarity=0.118  Sum_probs=162.1

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...+|+||||||+  |+||+++++.|+++|++|++++|+....+.+.+...+.              +++.++.+|++|.
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~~~   76 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------------GSELVFPCDVADD   76 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------------TCCCEEECCTTCH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--------------CCcEEEECCCCCH
Confidence            4678899999999  99999999999999999999999965444433322221              4588999999999


Q ss_pred             hhHHHHhC-------CCcEEEEcccCCCC-----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          155 VQIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       155 ~sl~~a~~-------~vD~VI~~Ag~~~~-----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      +++.++++       ++|+||||||....           +..++...+++|+.++.++++++...  +.++||++||.+
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~  156 (271)
T 3ek2_A           77 AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG  156 (271)
T ss_dssp             HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccc
Confidence            98887774       68999999996532           22234567899999999999999765  235899999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cceeecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~~~~~~~~~~~~g~V~v  285 (530)
                      ....      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.......  ............+.+.+.
T Consensus       157 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p  230 (271)
T 3ek2_A          157 AERA------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTI  230 (271)
T ss_dssp             GTSB------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred             cccC------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCH
Confidence            6432      23456799999999987652       68999999999998864322110  000001112233456899


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHH
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEE  322 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~e  322 (530)
                      +|+|+++++++.+. ....|++|++.++....+.++.+
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence            99999999999864 33579999999997766555544

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.90  E-value=6.7e-23  Score=204.64  Aligned_cols=219  Identities=14%  Similarity=0.138  Sum_probs=162.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..++|+||||||+|+||++++++|+++|++|++++|+. ...+.+.+++...             ..++.++.+|++|.+
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~   81 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-------------GSDAIAIKADIRQVP   81 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHH
Confidence            35678999999999999999999999999999988754 4555555554432             267899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccCCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~~~~  220 (530)
                      ++.++++       ++|+||||||....      +..++...+++|+.++.++++++...-  .++||++||......+ 
T Consensus        82 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  160 (270)
T 3is3_A           82 EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS-  160 (270)
T ss_dssp             HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-
Confidence            8877763       78999999996532      223456679999999999999998752  3599999997643222 


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc------c------eeecccCcccCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH------N------ITLSQEDTLFGG  281 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~------~------~~~~~~~~~~~g  281 (530)
                          ......|+.+|++.+.+.+.       .|++++.|+||+|.++........      .      ..........+.
T Consensus       161 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  236 (270)
T 3is3_A          161 ----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR  236 (270)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC
Confidence                23456799999999988762       689999999999998753210000      0      000011123345


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +.+.+|||+++++++.+. .+..|++++|.++.
T Consensus       237 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            678999999999999754 33568999998874

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.90  E-value=6.4e-23  Score=199.44  Aligned_cols=188  Identities=14%  Similarity=0.064  Sum_probs=137.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.   .              .++.++.+|+.|.+++.
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~--------------~~~~~~~~D~~~~~~~~   66 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE---L--------------EGALPLPGDVREEGDWA   66 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S--------------TTCEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---h--------------hhceEEEecCCCHHHHH
Confidence            357899999999999999999999999999999998766554321   1              36889999999998887


Q ss_pred             HHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCCCc
Q 009648          159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++       +++|+||||||....      ...++...+++|+.++.+++++    +++.+.++||++||..+...   
T Consensus        67 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---  143 (234)
T 2ehd_A           67 RAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP---  143 (234)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC---
Confidence            766       378999999996432      1223456789999998755554    55667789999999876332   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|++.+.+++       ..|+++++||||++.++......         .. + .+++++|+|+++++
T Consensus       144 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~~-~-~~~~~~dvA~~~~~  209 (234)
T 2ehd_A          144 ---FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP---------GQ-A-WKLKPEDVAQAVLF  209 (234)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHH
T ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc---------cc-c-CCCCHHHHHHHHHH
Confidence               2345679999999887764       26899999999999876432110         00 1 15799999999999


Q ss_pred             HHhCCC
Q 009648          295 MAKNRS  300 (530)
Q Consensus       295 ll~~~~  300 (530)
                      ++.++.
T Consensus       210 l~~~~~  215 (234)
T 2ehd_A          210 ALEMPG  215 (234)
T ss_dssp             HHHSCC
T ss_pred             HhCCCc
Confidence            998865

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.90  E-value=9.8e-23  Score=204.79  Aligned_cols=217  Identities=17%  Similarity=0.104  Sum_probs=160.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC----------------chhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------------VQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~----------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+                .+++..+.+.+...             .
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   75 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-------------N   75 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-------------T
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-------------C
Confidence            567899999999999999999999999999999987                44444444333221             2


Q ss_pred             CCeEEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc----C
Q 009648          142 EMLELVECDLEKRVQIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K  203 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g  203 (530)
                      .++.++.+|++|.++++++++       ++|+||||||....       +..++...+++|+.++.++++++...    +
T Consensus        76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~  155 (286)
T 3uve_A           76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG  155 (286)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence            679999999999998887764       79999999996432       22335567999999999998887542    3


Q ss_pred             -CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----cc-
Q 009648          204 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HN-  269 (530)
Q Consensus       204 -v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~~-  269 (530)
                       .++||++||......      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.......     .. 
T Consensus       156 ~~g~iv~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  229 (286)
T 3uve_A          156 RGGSIILTSSVGGLKA------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDL  229 (286)
T ss_dssp             SCEEEEEECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred             CCcEEEEECchhhccC------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccc
Confidence             469999999866432      23356799999999887752       68999999999999875421100     00 


Q ss_pred             --ee-------ecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          270 --IT-------LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       270 --~~-------~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                        ..       ........+.+.+.+|||+++++++.+. .+..|++++|.++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          230 ENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             SSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence              00       0011111256789999999999999764 33569999998874

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.90  E-value=6.8e-23  Score=203.16  Aligned_cols=208  Identities=18%  Similarity=0.153  Sum_probs=152.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.                        ..+.++.+|+.|.++
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------------~~~~~~~~Dl~d~~~   73 (253)
T 2nm0_A           18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------------------EGFLAVKCDITDTEQ   73 (253)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------------TTSEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------------------ccceEEEecCCCHHH
Confidence            35578999999999999999999999999999999986431                        237889999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++++       .+|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        74 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-  152 (253)
T 2nm0_A           74 VEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG-  152 (253)
T ss_dssp             HHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-
Confidence            877664       57999999996432      3445667799999999999887653    46789999999865321 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++...................+.+++.+|+|+++
T Consensus       153 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i  227 (253)
T 2nm0_A          153 -----SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATV  227 (253)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 22356799999999887763       689999999999987743211000000000112234568999999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCCCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++.++. +..|+++.+.++..
T Consensus       228 ~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          228 RFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhCccccCCcCcEEEECCccc
Confidence            99997653 34689999988753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.90  E-value=4e-23  Score=205.61  Aligned_cols=215  Identities=15%  Similarity=0.102  Sum_probs=159.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+|+||++++++|+++|++|++++ |+..+.+...+.+.+.             ..++.++.+|++|.++
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   90 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN-------------GGNGRLLSFDVANREQ   90 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-------------CCceEEEEecCCCHHH
Confidence            4578999999999999999999999999997765 5666666655544432             2679999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH-----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~-----~~gv~r~V~iSS~~v~~~  218 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.++.++++++.     +.+.++||++||......
T Consensus        91 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  170 (267)
T 4iiu_A           91 CREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG  170 (267)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence            887774       79999999996532      222345678999999999998874     456679999999755322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++.+.+.+.       .|+++++|+||+|.++....... ...........+.+.+.+|+|++
T Consensus       171 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~p~~~~~~~edva~~  243 (267)
T 4iiu_A          171 ------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEES-ALKEAMSMIPMKRMGQAEEVAGL  243 (267)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHH-HHHHHHHTCTTCSCBCHHHHHHH
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHH-HHHHHHhcCCCCCCcCHHHHHHH
Confidence                  23456799999988877652       58999999999999875432110 00001112233456899999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~  312 (530)
                      +++++.+. ....|+++++.++
T Consensus       244 ~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          244 ASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCCcccCccCCEEEeCCC
Confidence            99999764 3356899999876

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.90  E-value=9.7e-23  Score=209.50  Aligned_cols=230  Identities=17%  Similarity=0.169  Sum_probs=154.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-----hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-----~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++.+|+.     ++.+.+.+.+...             ..++.++.+|++
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-------------~~~~~~~~~Dvt   69 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-------------DVDLRTLELDVQ   69 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-------------TCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-------------CCcEEEEEeecC
Confidence            3468999999999999999999999999999998863     3334443333222             257999999999


Q ss_pred             CHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCc
Q 009648          153 KRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGT  215 (530)
Q Consensus       153 d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v  215 (530)
                      |.+++.++++       ++|+||||||....      +..++...+++|+.|+.++++++    ++.+.++||++||.+.
T Consensus        70 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~  149 (324)
T 3u9l_A           70 SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSS  149 (324)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchh
Confidence            9998888775       89999999996432      22234567899999999999988    5667889999999876


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce----ee------ccc---
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI----TL------SQE---  275 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~----~~------~~~---  275 (530)
                      ....     ......|+.+|+++|.+++.       .|+++++|+||+|.++.+.+......    ..      ...   
T Consensus       150 ~~~~-----~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (324)
T 3u9l_A          150 AGGT-----PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG  224 (324)
T ss_dssp             TSCC-----CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHH
T ss_pred             ccCC-----CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCH
Confidence            4221     12246799999999987653       69999999999998765432111100    00      000   


Q ss_pred             -------CcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHh
Q 009648          276 -------DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK  326 (530)
Q Consensus       276 -------~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~  326 (530)
                             ..+.....+++|||++++.++..+... .....+.++.......+.+++.+
T Consensus       225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~-~~~~~~~gp~~~~~~~~~~~~~~  281 (324)
T 3u9l_A          225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGK-RPFRVHVDPAEDGADVGFSVLDR  281 (324)
T ss_dssp             HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTC-CCSEEEECTTCCSHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCC-CCeEEEeCCcchHHHHHHHHHHH
Confidence                   001112368899999999999877422 22333455544454444444333

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.90  E-value=3.1e-22  Score=194.90  Aligned_cols=196  Identities=17%  Similarity=0.181  Sum_probs=151.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.+.        .    ..++.++.+|++|.+++.+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~----~~~~~~~~~D~~~~~~v~~   69 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--------Q----GVEVFYHHLDVSKAESVEE   69 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------H----CCCEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--------c----CCeEEEEEeccCCHHHHHH
Confidence            578999999999999999999999999999999998887776655422        0    2579999999999999888


Q ss_pred             HhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCCccc
Q 009648          160 ALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      +++       ++|+||||||....      +..++...+++|+.++.++++++..   .+.+++|++||......     
T Consensus        70 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----  144 (235)
T 3l77_A           70 FSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL-----  144 (235)
T ss_dssp             HCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC-----
T ss_pred             HHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc-----
Confidence            875       78999999996532      2233456789999999999998764   23458888888755332     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                       ......|+.+|++.+.+++.     .|+++++|+||+|.++.......        ......+++.+|+|+++++++.+
T Consensus       145 -~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          145 -IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------KPKEKGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC--------CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred             -CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC--------cccccCCCCHHHHHHHHHHHHcC
Confidence             12345799999999988764     69999999999998764322111        11112568999999999999998


Q ss_pred             CCC
Q 009648          299 RSL  301 (530)
Q Consensus       299 ~~~  301 (530)
                      +..
T Consensus       216 ~~~  218 (235)
T 3l77_A          216 PKD  218 (235)
T ss_dssp             CTT
T ss_pred             CCC
Confidence            763

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.90  E-value=9.7e-23  Score=206.67  Aligned_cols=217  Identities=13%  Similarity=0.107  Sum_probs=160.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------------chhHHHHHHHHHHhhhhccccccCCCCCCCeE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEMLE  145 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~  145 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|+            .+++..+.+.+...             ..++.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~   92 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL-------------GRRII   92 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCceE
Confidence            567899999999999999999999999999999987            44455544444332             25799


Q ss_pred             EEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc-----CCCE
Q 009648          146 LVECDLEKRVQIEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-----KVNH  206 (530)
Q Consensus       146 ~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r  206 (530)
                      ++.+|++|.+++.++++       ++|+||||||....       +..++...+++|+.++.++++++...     +.++
T Consensus        93 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~  172 (299)
T 3t7c_A           93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGS  172 (299)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEE
T ss_pred             EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence            99999999988877763       79999999996432       22234667999999999999886542     3579


Q ss_pred             EEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc--------cee
Q 009648          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--------NIT  271 (530)
Q Consensus       207 ~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~--------~~~  271 (530)
                      ||++||......      ......|+.+|++++.+.+.       .|+++++|+||+|.++........        ...
T Consensus       173 Iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  246 (299)
T 3t7c_A          173 IVFTSSIGGLRG------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPT  246 (299)
T ss_dssp             EEEECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred             EEEECChhhccC------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccch
Confidence            999999866332      23356799999999987752       589999999999998853211000        000


Q ss_pred             e-------cccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          272 L-------SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       272 ~-------~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .       .......+.+.+.+|||+++++++.+. .+..|++++|.++.
T Consensus       247 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          247 VEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             HHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence            0       001111245679999999999999765 33569999998875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.90  E-value=8.1e-23  Score=204.13  Aligned_cols=205  Identities=16%  Similarity=0.148  Sum_probs=148.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|++|.++
T Consensus         1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~   67 (264)
T 3tfo_A            1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-------------GGTALAQVLDVTDRHS   67 (264)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-------------TCEEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHH
Confidence            346789999999999999999999999999999999998888877666543             2578899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.+++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        68 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-  146 (264)
T 3tfo_A           68 VAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-  146 (264)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-
Confidence            87766       479999999996532      223355678999999988877764    456679999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                           ......|+.+|++.+.+.+.     .|++++.|+||+|.++........... ..........++.+|||+++++
T Consensus       147 -----~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~pedvA~~v~~  220 (264)
T 3tfo_A          147 -----VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETM-AAMDTYRAIALQPADIARAVRQ  220 (264)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------CCCHHHHHHHHHH
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHH-HHHHhhhccCCCHHHHHHHHHH
Confidence                 23356799999999877653     489999999999988743221110000 0000111124789999999999


Q ss_pred             HHhCCCC
Q 009648          295 MAKNRSL  301 (530)
Q Consensus       295 ll~~~~~  301 (530)
                      ++.++..
T Consensus       221 l~s~~~~  227 (264)
T 3tfo_A          221 VIEAPQS  227 (264)
T ss_dssp             HHHSCTT
T ss_pred             HhcCCcc
Confidence            9998863

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.90  E-value=7.4e-23  Score=202.06  Aligned_cols=210  Identities=13%  Similarity=0.105  Sum_probs=149.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~  155 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.+..+.       .              +.+.++ +|+. +.+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~--------------~~~~~~-~D~~~~~~   73 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S--------------GHRYVV-CDLRKDLD   73 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T--------------CSEEEE-CCTTTCHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-------h--------------CCeEEE-eeHHHHHH
Confidence            4678899999999999999999999999999999998733221       1              356777 9993 233


Q ss_pred             hHHHHhCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHH----HHHhcCCCEEEEEcCCCccCCCCccccc
Q 009648          156 QIEPALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                      .+.+.+.++|+||||||....      +..++...+++|+.++.++++    .+++.+.++||++||..+...      .
T Consensus        74 ~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------~  147 (249)
T 1o5i_A           74 LLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP------I  147 (249)
T ss_dssp             HHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------C
T ss_pred             HHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC------C
Confidence            344444589999999996432      122345678899999776654    455667789999999876432      2


Q ss_pred             cchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee-ecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          226 NLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~-~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      .....|+.+|++.+.+.+.       .|+++++||||+|+++........... ........+.+++++|+|+++++++.
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          148 ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            3456799999999877652       689999999999999853211100000 00111223456899999999999997


Q ss_pred             CC-CCCCCcEEEEeCCCC
Q 009648          298 NR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       298 ~~-~~~~g~vynv~~~~~  314 (530)
                      +. ....|++|++.++..
T Consensus       228 ~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             GGGTTCCSCEEEESTTCC
T ss_pred             ccccCCCCCEEEECCCcc
Confidence            64 334689999988753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.90  E-value=7.7e-23  Score=205.01  Aligned_cols=212  Identities=13%  Similarity=0.077  Sum_probs=151.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+..              ..++.++.+|+.|.++++++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~   87 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--------------KTRVLPLTLDVRDRAAMSAA   87 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT--------------TSCEEEEECCTTCHHHHHHH
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--------------CCcEEEEEcCCCCHHHHHHH
Confidence            7999999999999999999999999999999998877665543321              14789999999999999888


Q ss_pred             hC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCC-EEEEEcCCCccCCCCc
Q 009648          161 LG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVN-HFIMVSSLGTNKFGFP  221 (530)
Q Consensus       161 ~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~-r~V~iSS~~v~~~~~~  221 (530)
                      ++       ++|+||||||....       +..++...+++|+.++.++++++.    +.+.+ +||++||......   
T Consensus        88 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~---  164 (272)
T 2nwq_A           88 VDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP---  164 (272)
T ss_dssp             HHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC---
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC---
Confidence            75       46999999996431       122345678999999887766654    55667 9999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|++.+.+++.       .|+++++|+||+|.++......................++.+|+|+++++
T Consensus       165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~  241 (272)
T 2nwq_A          165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFW  241 (272)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHH
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHH
Confidence               22346799999999988763       58999999999998874321100000000000001124789999999999


Q ss_pred             HHhCCCCCCCcEEEEeCC
Q 009648          295 MAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~  312 (530)
                      ++.++....++.+.+.++
T Consensus       242 l~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          242 IMNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HHTSCTTEEEEEEEEEET
T ss_pred             HhCCCccCccceEEEeec
Confidence            999876556777777654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.90  E-value=1.9e-22  Score=201.99  Aligned_cols=217  Identities=16%  Similarity=0.134  Sum_probs=158.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-------------CchhHHHHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-------------~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ..+|+||||||+|+||+++++.|+++|++|++++|             +.++.+.+.+.+...             ..++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~   75 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA-------------NRRI   75 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCCE
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc-------------CCeE
Confidence            56789999999999999999999999999999998             444555444433322             2679


Q ss_pred             EEEEecCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCE
Q 009648          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNH  206 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r  206 (530)
                      .++.+|+.|.+++.+++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+ .++
T Consensus        76 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~  155 (277)
T 3tsc_A           76 VAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGS  155 (277)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCE
Confidence            99999999998887776       469999999996533      223355679999999999988854    333 469


Q ss_pred             EEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc----------cccc
Q 009648          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK----------ETHN  269 (530)
Q Consensus       207 ~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~----------~~~~  269 (530)
                      ||++||......      ......|+.+|++.+.+.+.       .|++++.|+||+|.++.....          ....
T Consensus       156 iv~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  229 (277)
T 3tsc_A          156 IILISSAAGMKM------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ  229 (277)
T ss_dssp             EEEECCGGGTSC------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG
T ss_pred             EEEEccHhhCCC------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH
Confidence            999999876432      23356799999999988762       589999999999998753210          0000


Q ss_pred             eeecccCcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       270 ~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ............+.+.+|||+++++++.+.. +..|++++|.++.
T Consensus       230 ~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          230 LSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             GTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            0000011111246789999999999997653 3568999998874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.90  E-value=2.5e-23  Score=208.41  Aligned_cols=216  Identities=15%  Similarity=0.134  Sum_probs=161.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.++
T Consensus        27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~~~~~   90 (281)
T 3ppi_A           27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----------------GNRAEFVSTNVTSEDS   90 (281)
T ss_dssp             GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------------CCceEEEEcCCCCHHH
Confidence            356789999999999999999999999999999999998777665432                1578999999999999


Q ss_pred             HHHHhC------CCcEEEEcc-cCCCCc-----------cCCCCcchHhHHHHHHHHHHHHHh----------cCCCEEE
Q 009648          157 IEPALG------NASVVICCI-GASEKE-----------VFDITGPYRIDFQATKNLVDAATI----------AKVNHFI  208 (530)
Q Consensus       157 l~~a~~------~vD~VI~~A-g~~~~~-----------~~~~~~~~~vNv~gt~~Ll~aa~~----------~gv~r~V  208 (530)
                      +.++++      ++|+||||+ |.....           ..++...+++|+.++.++++++..          .+.++||
T Consensus        91 v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv  170 (281)
T 3ppi_A           91 VLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALV  170 (281)
T ss_dssp             HHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEE
T ss_pred             HHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEE
Confidence            888774      689999994 432211           112456789999999999988763          2345999


Q ss_pred             EEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCcccC
Q 009648          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFG  280 (530)
Q Consensus       209 ~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~~  280 (530)
                      ++||......      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.......... .+.......+
T Consensus       171 ~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  244 (281)
T 3ppi_A          171 LTASIAGYEG------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPK  244 (281)
T ss_dssp             EECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSS
T ss_pred             EEecccccCC------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCC
Confidence            9999876432      23456899999998877652       68999999999998763221110000 0111111124


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      .+++.+|+|+++++++.+.. ..|+++++.++...
T Consensus       245 ~~~~pedvA~~v~~l~s~~~-~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          245 RLGTPDEFADAAAFLLTNGY-INGEVMRLDGAQRF  278 (281)
T ss_dssp             SCBCHHHHHHHHHHHHHCSS-CCSCEEEESTTCCC
T ss_pred             CCCCHHHHHHHHHHHHcCCC-cCCcEEEECCCccc
Confidence            57899999999999998754 67999999998654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.90  E-value=8e-23  Score=204.87  Aligned_cols=212  Identities=12%  Similarity=0.066  Sum_probs=147.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||++++++|+++|++|++++|+.++++.+.+++                ..++.++.+|++|.++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~d~~~   88 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----------------GDDALCVPTDVTDPDS   88 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------TSCCEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------CCCeEEEEecCCCHHH
Confidence            356789999999999999999999999999999999988777655432                1578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cC--CCEEEEEcCCCcc
Q 009648          157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTN  216 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g--v~r~V~iSS~~v~  216 (530)
                      +.++++       ++|+||||||....       +..++...+++|+.++.++++++..    .+  .++||++||....
T Consensus        89 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~  168 (272)
T 4dyv_A           89 VRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISAT  168 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTT
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhc
Confidence            887774       89999999996422       2223456799999998888877653    33  4699999998764


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..      ......|+.+|++++.+.+.       .|+++++|+||+|.++........... .......+.+++++|||
T Consensus       169 ~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~pedvA  241 (272)
T 4dyv_A          169 SP------RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ-ADLSIKVEPVMDVAHVA  241 (272)
T ss_dssp             SC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------CHHHHH
T ss_pred             CC------CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchh-hhhcccccCCCCHHHHH
Confidence            32      23456799999999988752       689999999999998753221111000 01112233468999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIA  311 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~  311 (530)
                      +++++++.++.......+.+..
T Consensus       242 ~~v~fL~s~~~~~~~~~i~i~~  263 (272)
T 4dyv_A          242 SAVVYMASLPLDANVQFMTIMA  263 (272)
T ss_dssp             HHHHHHHHSCTTSCCCEEEEEE
T ss_pred             HHHHHHhCCCCcCccceEEEec
Confidence            9999999987643344444443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.90  E-value=6.7e-23  Score=207.50  Aligned_cols=218  Identities=9%  Similarity=0.092  Sum_probs=159.4

Q ss_pred             CCCCCEEEEECCCcH--HHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~--IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..++|+||||||+|+  ||+++++.|+++|++|++++|+....+.+.+...+.              +++.++.+|++|.
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~   93 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--------------GAFVAGHCDVADA   93 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--------------TCEEEEECCTTCH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--------------CCceEEECCCCCH
Confidence            467889999999987  999999999999999999999965444333322222              4688999999999


Q ss_pred             hhHHHHhC-------CCcEEEEcccCCC----------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          155 VQIEPALG-------NASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       155 ~sl~~a~~-------~vD~VI~~Ag~~~----------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      ++++++++       ++|+||||||...          .+..++...+++|+.++.++++++...  +.++||++||...
T Consensus        94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~  173 (293)
T 3grk_A           94 ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA  173 (293)
T ss_dssp             HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence            88877763       7899999999653          122234567999999999999998864  3459999999866


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.........  ..........+.+.+.+
T Consensus       174 ~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  247 (293)
T 3grk_A          174 EKV------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID  247 (293)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence            432      23356799999999987752       6899999999999987432211000  00011122334568899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      |+|+++++++.+. .+..|+++++.++..
T Consensus       248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          248 EVGDVGLYFLSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHcCccccCCcceEEEECCCcc
Confidence            9999999999864 335799999998854

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.90  E-value=9.9e-23  Score=206.44  Aligned_cols=219  Identities=11%  Similarity=0.097  Sum_probs=163.6

Q ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           76 DSKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+.+|+||||||+|  +||+++++.|+++|++|++++|+....+.+.+.....              +.+.++.+|++|
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d   91 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--------------GVKLTVPCDVSD   91 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--------------TCCEEEECCTTC
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--------------CCeEEEEcCCCC
Confidence            345688999999997  9999999999999999999999976555544433322              457899999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      .+++++++       +++|+||||||....          +..++...+++|+.++.++++++...  ..++||++||.+
T Consensus        92 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~  171 (296)
T 3k31_A           92 AESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYG  171 (296)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehh
Confidence            99888777       478999999996531          22335667999999999999999864  235999999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v  285 (530)
                      ....      ......|+.+|++++.+.+.       .|+++++|+||+|.++.........  ..........+.+...
T Consensus       172 ~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p  245 (296)
T 3k31_A          172 AEKV------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTL  245 (296)
T ss_dssp             GTSC------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred             hccC------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCH
Confidence            6432      23456799999999987652       6899999999999987532211000  0001111223456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +|||+++++++.+. .+..|++++|.++..
T Consensus       246 edvA~~v~fL~s~~a~~itG~~i~vdGG~~  275 (296)
T 3k31_A          246 DDVGGAALYLLSDLGRGTTGETVHVDCGYH  275 (296)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHcCCccCCccCCEEEECCCcc
Confidence            99999999999864 335799999998854

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=6.1e-23  Score=200.22  Aligned_cols=200  Identities=13%  Similarity=0.032  Sum_probs=144.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++||||||+|+||+++++.|+++|  ++|++++|+.++.+.+.+    .            ...+++++.+|+.|.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~------------~~~~~~~~~~D~~~~~~   65 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I------------KDSRVHVLPLTVTCDKS   65 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C------------CCTTEEEEECCTTCHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c------------cCCceEEEEeecCCHHH
Confidence            35789999999999999999999999  999999999887655421    0            12579999999999998


Q ss_pred             HHHHhC---------CCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHHHhc----------C-----CC
Q 009648          157 IEPALG---------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATIA----------K-----VN  205 (530)
Q Consensus       157 l~~a~~---------~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------g-----v~  205 (530)
                      +.++++         ++|+||||||... .      ...++...+++|+.++.++++++...          +     .+
T Consensus        66 ~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  145 (250)
T 1yo6_A           66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA  145 (250)
T ss_dssp             HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred             HHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCc
Confidence            888775         8999999999654 1      11224566899999999988887543          4     68


Q ss_pred             EEEEEcCCCccCCCC-ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCc
Q 009648          206 HFIMVSSLGTNKFGF-PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT  277 (530)
Q Consensus       206 r~V~iSS~~v~~~~~-~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~  277 (530)
                      +||++||........ ......+...|+.+|++.+.+++.       .|+++++||||+|.++....             
T Consensus       146 ~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------  212 (250)
T 1yo6_A          146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------  212 (250)
T ss_dssp             EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             EEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------
Confidence            999999986533211 011113567899999999988752       48999999999998764311             


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCC-CCcEEEE
Q 009648          278 LFGGQVSNLQVAELLACMAKNRSLS-YCKVVEV  309 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~~~-~g~vynv  309 (530)
                        ..+++.+|+|+.+++++.+.... .|+.+.+
T Consensus       213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~  243 (250)
T 1yo6_A          213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMR  243 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEEET
T ss_pred             --CCCCCHHHHHHHHHHHHhcccccCCCeEEEE
Confidence              13588999999999999876532 3444443

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.90  E-value=2.5e-23  Score=206.68  Aligned_cols=216  Identities=12%  Similarity=0.053  Sum_probs=157.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...             ..++.++.+|+.|.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~   71 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-------------GVEARSYVCDVTSEEAV   71 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TSCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988777665554322             24789999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCC-CC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~-~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      .+++       +++|+||||||.. ..      +..++...+++|+.++.++++++..    .+.++||++||...... 
T Consensus        72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-  150 (262)
T 1zem_A           72 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-  150 (262)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-
Confidence            7666       3799999999964 21      2223456789999999998888664    46679999999765322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc------------cc--cc-e-eecccC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK------------ET--HN-I-TLSQED  276 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~------------~~--~~-~-~~~~~~  276 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++.....            ..  .. . ......
T Consensus       151 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (262)
T 1zem_A          151 -----PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS  225 (262)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc
Confidence                 12346799999998877652       689999999999987642110            00  00 0 000011


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          277 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       277 ~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      ...+.+.+.+|||+++++++.+. .+..|+++.+.++
T Consensus       226 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          226 VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            22345678999999999999764 3346888877653

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.90  E-value=6.8e-23  Score=206.00  Aligned_cols=216  Identities=13%  Similarity=0.125  Sum_probs=156.3

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|+||||||+  |+||+++++.|+++|++|++++|+.. .....+.+.+.             .+++.++.+|++|.+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~   84 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG-------------FGSDLVVKCDVSLDE   84 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH-------------TTCCCEEECCTTCHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh-------------cCCeEEEEcCCCCHH
Confidence            557899999999  99999999999999999999999875 33222333221             134788999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCc
Q 009648          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGT  215 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v  215 (530)
                      +++++++       ++|+||||||....          +..++...+++|+.++.++++++...   +.++||++||.+.
T Consensus        85 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~  164 (285)
T 2p91_A           85 DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA  164 (285)
T ss_dssp             HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh
Confidence            8877764       78999999996532          12234567899999999999998765   2379999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|++.+.+++.       .|+++++|+||+|+++....... ... .........+.+.+++
T Consensus       165 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  238 (285)
T 2p91_A          165 EKV------VPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE  238 (285)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH
Confidence            332      22345799999999987652       58999999999999985322110 000 0000111233467899


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |+|+++++++.+.. ...|++|++.++.
T Consensus       239 dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          239 DVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            99999999997532 2468899998874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.90  E-value=7e-23  Score=204.64  Aligned_cols=217  Identities=13%  Similarity=0.078  Sum_probs=155.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..+|+||||||+|+||+++++.|+++|++|+++++ +....+.+.+.+...             ..++.++.+|++|.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~   90 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA-------------GGKALTAQADVSDPA   90 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT-------------TCCEEEEECCTTCHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCeEEEEEcCCCCHH
Confidence            456789999999999999999999999999999854 555666655554432             257899999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++++       ++|+||||||....      +..++...+++|+.++.++++++...  +.++||++||......  
T Consensus        91 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~--  168 (267)
T 3u5t_A           91 AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLL--  168 (267)
T ss_dssp             HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHC--
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccC--
Confidence            8877764       78999999996532      12234566889999999999998764  2359999999765322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|++.+.+.+.       .|++++.|+||+|.++......... ..........+.+.+++|+|+++
T Consensus       169 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  244 (267)
T 3u5t_A          169 ----HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAV  244 (267)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                22356799999999988763       5899999999999887432111000 01111222334568899999999


Q ss_pred             HHHHhCCC-CCCCcEEEEeCC
Q 009648          293 ACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       293 ~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ++++.+.. +..|+++++.++
T Consensus       245 ~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          245 AFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHHHSTTTTTCCSEEEEESSS
T ss_pred             HHHhCccccCccCCEEEeCCC
Confidence            99997653 346889988876

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.90  E-value=2.2e-23  Score=213.62  Aligned_cols=232  Identities=12%  Similarity=0.042  Sum_probs=171.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC----------chhHHHHHHHHHHhhhhccccccCCCCCCCeEE
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------VQRAENLVQSVKQMKLDGELANKGIQPVEMLEL  146 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~----------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~  146 (530)
                      ..++++||||||+|+||+++++.|+++|++|++++|+          .+..+.+.+++...             ..++.+
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~   90 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA-------------GGEAVA   90 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT-------------TCEEEE
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc-------------CCcEEE
Confidence            4568899999999999999999999999999999998          56666665555432             257889


Q ss_pred             EEecCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----C------
Q 009648          147 VECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K------  203 (530)
Q Consensus       147 v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g------  203 (530)
                      +.+|++|.+++.++++       ++|+||||||....      +..++...+++|+.++.++++++...    +      
T Consensus        91 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~  170 (322)
T 3qlj_A           91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAV  170 (322)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCC
Confidence            9999999988877774       79999999996532      22335667999999999999887532    1      


Q ss_pred             CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccC
Q 009648          204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQED  276 (530)
Q Consensus       204 v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~  276 (530)
                      -++||++||......      ......|+.+|++++.+++.       .|+++++|+|| +.++...........   ..
T Consensus       171 ~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~---~~  240 (322)
T 3qlj_A          171 DGRIINTSSGAGLQG------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA---TQ  240 (322)
T ss_dssp             CEEEEEECCHHHHHC------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------
T ss_pred             CcEEEEEcCHHHccC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh---cc
Confidence            159999999755321      23356799999999988762       68999999999 765532211111100   01


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC-----------------ChhHHHHHHHhcCCCC
Q 009648          277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA-----------------PLTPMEELLAKIPSQR  331 (530)
Q Consensus       277 ~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~-----------------t~~~i~ell~~v~g~~  331 (530)
                      ......++++|||+++++++.+.. +..|++|++.++...                 ++.++.+++.++++..
T Consensus       241 ~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~  313 (322)
T 3qlj_A          241 DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA  313 (322)
T ss_dssp             ---CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred             ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence            111235789999999999997643 346899999887643                 6789999999988754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.90  E-value=1.6e-22  Score=205.41  Aligned_cols=204  Identities=17%  Similarity=0.048  Sum_probs=152.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||++++++|+++|++|++++|+.++...+.+++...             ..++.++.+|++|.+++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~v   95 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-------------GFDAHGVVCDVRHLDEM   95 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCceEEEEccCCCHHHH
Confidence            56789999999999999999999999999999999998888877665543             25789999999999988


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r~V~iSS~~v~~~~  219 (530)
                      .++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+ .++||++||...... 
T Consensus        96 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-  174 (301)
T 3tjr_A           96 VRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-  174 (301)
T ss_dssp             HHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-
Confidence            87764       79999999996532      223345679999999999998864    334 569999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cc--ee-----e--cccCcccCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN--IT-----L--SQEDTLFGGQ  282 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~--~~-----~--~~~~~~~~g~  282 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++....... ..  ..     .  .........+
T Consensus       175 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (301)
T 3tjr_A          175 -----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDES  249 (301)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------C
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCC
Confidence                 23456799999998877652       58999999999998874321100 00  00     0  0001112246


Q ss_pred             CCHHHHHHHHHHHHhCCC
Q 009648          283 VSNLQVAELLACMAKNRS  300 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~  300 (530)
                      ++++|||++++.+++.+.
T Consensus       250 ~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          250 VSADDVARLTADAILANR  267 (301)
T ss_dssp             CCHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhcCC
Confidence            899999999999998875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=3.4e-23  Score=204.89  Aligned_cols=211  Identities=15%  Similarity=0.130  Sum_probs=155.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +|+||||||+|+||+++++.|+++|  +.|++++|+.++.+.+.+.+                ..++.++.+|++|.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   65 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----------------GDRFFYVVGDITEDSVL   65 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----------------GGGEEEEESCTTSHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----------------CCceEEEECCCCCHHHH
Confidence            5799999999999999999999985  89999999988777655432                14789999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       ++|+||||||....       +..++...+++|+.++.++++++    ++.+ ++||++||...... 
T Consensus        66 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-  143 (254)
T 3kzv_A           66 KQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-  143 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-
T ss_pred             HHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-
Confidence            77764       78999999996422       22234567999999999998887    4555 79999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccc---------eeecccCcccCCCCCH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN---------ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~---------~~~~~~~~~~~g~V~v  285 (530)
                           ......|+.+|++.+.+.+.     .|++++.|+||+|.++.........         ..........+.+.+.
T Consensus       144 -----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p  218 (254)
T 3kzv_A          144 -----FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS  218 (254)
T ss_dssp             -----SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----C
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCc
Confidence                 23456899999999988763     5899999999999987543211000         0000111223456789


Q ss_pred             HHHHHHHHHHHhCC--CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR--SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~--~~~~g~vynv~~~~  313 (530)
                      +|+|+++++++.+.  .+..|+++++.++.
T Consensus       219 ~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          219 SVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             ccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            99999999999876  34568888877764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=1.2e-22  Score=207.80  Aligned_cols=220  Identities=14%  Similarity=0.090  Sum_probs=160.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------------chhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ....+|+||||||+|+||+++++.|+++|++|++++|+            .+++..+.+.+...             ..+
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~  108 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ-------------GRR  108 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT-------------TCC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc-------------CCe
Confidence            34678899999999999999999999999999999986            34444443333322             257


Q ss_pred             eEEEEecCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cC-CC
Q 009648          144 LELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VN  205 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g-v~  205 (530)
                      +.++.+|+.|.++++++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+ .+
T Consensus       109 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g  188 (317)
T 3oec_A          109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGG  188 (317)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCE
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCC
Confidence            9999999999988877764       79999999996532      2233456789999999999888753    33 46


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc----------cc
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----------TH  268 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~----------~~  268 (530)
                      +||++||......      ......|+.+|++++.+++.       .|+++++|+||+|+++......          ..
T Consensus       189 ~Iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (317)
T 3oec_A          189 SVIFVSSTVGLRG------APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP  262 (317)
T ss_dssp             EEEEECCGGGSSC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred             EEEEECcHHhcCC------CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence            8999999866432      23356799999999987762       5899999999999987421100          00


Q ss_pred             c-----eeecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          269 N-----ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       269 ~-----~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .     ..+.........+++++|||+++++++.+. .+..|++++|.++..
T Consensus       263 ~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          263 TREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             chhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            0     000011112245789999999999999764 335699999988753

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.90  E-value=3.8e-23  Score=206.04  Aligned_cols=206  Identities=14%  Similarity=0.091  Sum_probs=154.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++                        ..++.++.+|+.|.+++
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------------~~~~~~~~~Dl~~~~~v   61 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------------EAKYDHIECDVTNPDQV   61 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------------SCSSEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------------CCceEEEEecCCCHHHH
Confidence            457899999999999999999999999999999998743                        14688999999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||..+...  
T Consensus        62 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  139 (264)
T 2dtx_A           62 KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII--  139 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccC--
Confidence            87764       79999999996432      2223456789999999888888764    46689999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH----CC--CCEEEEEcCcccCCCccccc------cc----ce-eecccCcccCCCC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA----SG--LPYTIVRPGGMERPTDAYKE------TH----NI-TLSQEDTLFGGQV  283 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~----~g--l~~tIvRPg~V~Gp~~~~~~------~~----~~-~~~~~~~~~~g~V  283 (530)
                          ......|+.+|++++.+++.    .+  +++++|+||+|.++......      ..    .. .........+.++
T Consensus       140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  215 (264)
T 2dtx_A          140 ----TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG  215 (264)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCc
Confidence                23456799999999988763    12  99999999999876321110      00    00 0000112234578


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|||+++++++.+. .+..|++|++.++.
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          216 KPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            9999999999999764 23568899998874

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.90  E-value=3e-23  Score=197.08  Aligned_cols=181  Identities=14%  Similarity=0.053  Sum_probs=142.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+ +|++|++++|+..                              ++.+|+.|.+++++
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------------~~~~D~~~~~~~~~   51 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------------DVTVDITNIDSIKK   51 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------------SEECCTTCHHHHHH
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------------ceeeecCCHHHHHH
Confidence            3589999999999999999999 9999999999752                              36799999999988


Q ss_pred             HhCC---CcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCccccccc
Q 009648          160 ALGN---ASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILNL  227 (530)
Q Consensus       160 a~~~---vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~~  227 (530)
                      ++++   +|+||||||......      .++...+++|+.++.++++++.+.   + ++||++||......      ...
T Consensus        52 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~------~~~  124 (202)
T 3d7l_A           52 MYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP------IVQ  124 (202)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC------CTT
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC------CCc
Confidence            8864   899999999643211      223456789999999999999876   4 69999999765322      234


Q ss_pred             hhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCC
Q 009648          228 FWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL  301 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~  301 (530)
                      ...|+.+|.+.|.+++.      .|+++++||||+++++.....         .......+++++|+|++++.++.+.  
T Consensus       125 ~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~---------~~~~~~~~~~~~dva~~~~~~~~~~--  193 (202)
T 3d7l_A          125 GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLE---------PFFEGFLPVPAAKVARAFEKSVFGA--  193 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHG---------GGSTTCCCBCHHHHHHHHHHHHHSC--
T ss_pred             cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhhh---------hhccccCCCCHHHHHHHHHHhhhcc--
Confidence            56799999999998874      389999999999998753211         1112345799999999999988543  


Q ss_pred             CCCcEEEE
Q 009648          302 SYCKVVEV  309 (530)
Q Consensus       302 ~~g~vynv  309 (530)
                      ..|++|||
T Consensus       194 ~~G~~~~v  201 (202)
T 3d7l_A          194 QTGESYQV  201 (202)
T ss_dssp             CCSCEEEE
T ss_pred             ccCceEec
Confidence            35788887

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.89  E-value=1.4e-22  Score=200.30  Aligned_cols=213  Identities=13%  Similarity=0.059  Sum_probs=160.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC--CCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~  154 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+....            ..++.++.+|+  .|.
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~D~~~~~~   76 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET------------GRQPQWFILDLLTCTS   76 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH------------SCCCEEEECCTTTCCH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc------------CCCceEEEEecccCCH
Confidence            4678899999999999999999999999999999999988887776665431            14788999999  888


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCcc
Q 009648          155 VQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~  216 (530)
                      +++.+++       +++|+||||||....       +..++...+++|+.++.++++++    ++.+.++||++||....
T Consensus        77 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~  156 (252)
T 3f1l_A           77 ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR  156 (252)
T ss_dssp             HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc
Confidence            8777666       379999999996421       12224567899999999999887    45677899999998653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      ..      ......|+.+|++.+.+.+.      ..++++.|+||+|.++......        .......+.+.+|+|+
T Consensus       157 ~~------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~--------~~~~~~~~~~p~dva~  222 (252)
T 3f1l_A          157 QG------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAF--------PTEDPQKLKTPADIMP  222 (252)
T ss_dssp             SC------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHC--------TTCCGGGSBCTGGGHH
T ss_pred             cC------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhC--------CccchhccCCHHHHHH
Confidence            32      23356799999999988763      2399999999999875321100        0011123568899999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      ++++++.+.. +..|+++++.++...
T Consensus       223 ~~~~L~s~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          223 LYLWLMGDDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             HHHHHHSGGGTTCCSCEEESSCC---
T ss_pred             HHHHHcCccccCCCCCEEEeCCCcCC
Confidence            9999998653 356899999888654

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=1.3e-22  Score=202.67  Aligned_cols=195  Identities=15%  Similarity=0.091  Sum_probs=150.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++..             ..++.++.+|+.|.++
T Consensus        28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   94 (272)
T 1yb1_A           28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-------------GAKVHTFVVDCSNRED   94 (272)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-------------CCeEEEEEeeCCCHHH
Confidence            456789999999999999999999999999999999988777766555432             2578999999999988


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +.++++       ++|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||..+... 
T Consensus        95 v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  173 (272)
T 1yb1_A           95 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-  173 (272)
T ss_dssp             HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-
Confidence            877764       789999999965322      12345678999999877776654    567789999999876322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH----------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~----------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++.+.+++.          .|+++++||||+|.++....          .....+.+++++|+|
T Consensus       174 -----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~~dva  238 (272)
T 1yb1_A          174 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV  238 (272)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----------ccccccCCCCHHHHH
Confidence                 23456799999999877652          38999999999998774211          011124568999999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      ++++.++.++.
T Consensus       239 ~~i~~~~~~~~  249 (272)
T 1yb1_A          239 NRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHcCC
Confidence            99999998875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.89  E-value=1.2e-22  Score=204.43  Aligned_cols=217  Identities=15%  Similarity=0.118  Sum_probs=158.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--  153 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+. ++.+.+.+.+...        .    ..++.++.+|++|  
T Consensus        20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~--------~----~~~~~~~~~Dv~~~~   87 (288)
T 2x9g_A           20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE--------R----SNTAVVCQADLTNSN   87 (288)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH--------S----TTCEEEEECCCSCST
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh--------c----CCceEEEEeecCCcc
Confidence            35678999999999999999999999999999999998 7776665554311        0    1578999999999  


Q ss_pred             --HhhHHHHh-------CCCcEEEEcccCCCCcc----------------CCCCcchHhHHHHHHHHHHHHHhc----C-
Q 009648          154 --RVQIEPAL-------GNASVVICCIGASEKEV----------------FDITGPYRIDFQATKNLVDAATIA----K-  203 (530)
Q Consensus       154 --~~sl~~a~-------~~vD~VI~~Ag~~~~~~----------------~~~~~~~~vNv~gt~~Ll~aa~~~----g-  203 (530)
                        .+++.+++       +++|+||||||......                .++...+++|+.++.++++++...    + 
T Consensus        88 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  167 (288)
T 2x9g_A           88 VLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP  167 (288)
T ss_dssp             THHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence              88777666       37999999999643211                123456889999999998887643    3 


Q ss_pred             -----CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee
Q 009648          204 -----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT  271 (530)
Q Consensus       204 -----v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~  271 (530)
                           .++||++||......      ......|+.+|++.+.+.+.       .|+++++|+||+|+++. ... .....
T Consensus       168 ~~~~~~g~iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~-~~~~~  239 (288)
T 2x9g_A          168 NCTSSNLSIVNLCDAMVDQP------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMG-EEEKD  239 (288)
T ss_dssp             ---CCCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSC-HHHHH
T ss_pred             CCCCCCeEEEEEecccccCC------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccC-hHHHH
Confidence                 469999999876432      23456799999998877652       58999999999999986 211 00000


Q ss_pred             ecccCcccCCC-CCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          272 LSQEDTLFGGQ-VSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       272 ~~~~~~~~~g~-V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ........+.+ .+.+|+|+++++++.+. .+..|+++++.++.
T Consensus       240 ~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          240 KWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            00011122345 78999999999999764 33568889888774

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.89  E-value=6.8e-23  Score=207.05  Aligned_cols=220  Identities=13%  Similarity=0.151  Sum_probs=162.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..+|+||||||+|+||+++++.|+++|+   +|++++|+.++.+.+.+.+...           ....++.++.+|++|.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~d~   99 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE-----------FPNAKVHVAQLDITQA   99 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-----------CTTCEEEEEECCTTCG
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhh-----------CCCCeEEEEECCCCCH
Confidence            4578999999999999999999999998   9999999998888877666542           1125789999999999


Q ss_pred             hhHHHHhC-------CCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCcc
Q 009648          155 VQIEPALG-------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (530)
Q Consensus       155 ~sl~~a~~-------~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~  216 (530)
                      ++++++++       ++|+||||||... .      +..++...+++|+.++.++++++    ++.+.++||++||....
T Consensus       100 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  179 (287)
T 3rku_A          100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR  179 (287)
T ss_dssp             GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence            99888774       6899999999643 1      22235667999999999999887    45577899999998663


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..      ......|+.+|++++.+.+.       .|+++++|+||+|.++......................++.+|||
T Consensus       180 ~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA  253 (287)
T 3rku_A          180 DA------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVA  253 (287)
T ss_dssp             SC------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHH
T ss_pred             CC------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHH
Confidence            32      23356799999999987752       689999999999988642110000000000000011235899999


Q ss_pred             HHHHHHHhCCCC-CCCcEEEEeCCCC
Q 009648          290 ELLACMAKNRSL-SYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~~~-~~g~vynv~~~~~  314 (530)
                      +++++++.++.. ..++++.+.+++.
T Consensus       254 ~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          254 DLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             HHHHHHhCCCCCeEecceEEeeCCCC
Confidence            999999987652 3578888887754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.89  E-value=4.6e-23  Score=205.20  Aligned_cols=221  Identities=12%  Similarity=0.133  Sum_probs=155.5

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ...++|+||||||+|+||+++++.|+++|++|++++|....   .+.+.+++...             ..++.++.+|++
T Consensus         7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~   73 (262)
T 3ksu_A            7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-------------GAKVALYQSDLS   73 (262)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-------------TCEEEEEECCCC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-------------CCcEEEEECCCC
Confidence            34668899999999999999999999999999999886543   33333333221             257899999999


Q ss_pred             CHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccC
Q 009648          153 KRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNK  217 (530)
Q Consensus       153 d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~  217 (530)
                      |.++++++++       ++|+||||||....      +..++...+++|+.++.++++++...  +.++||++||.....
T Consensus        74 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~  153 (262)
T 3ksu_A           74 NEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA  153 (262)
T ss_dssp             SHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc
Confidence            9998887774       78999999996432      22234566889999999999999875  456999999975522


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      .      ......|+.+|++.+.+.+.       .|++++.|+||+|.++....... ............+.+.+.+|+|
T Consensus       154 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA  227 (262)
T 3ksu_A          154 Y------TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIA  227 (262)
T ss_dssp             H------HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTH
T ss_pred             C------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHH
Confidence            1      22345699999999988762       58999999999998753211100 0111111122334567899999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTA  315 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~  315 (530)
                      +++++++.+..+..|+++++.++...
T Consensus       228 ~~v~~L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          228 PIIKFLTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred             HHHHHHcCCCCCccCCEEEECCCccC
Confidence            99999998744467999999988654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.89  E-value=4.1e-23  Score=206.27  Aligned_cols=209  Identities=18%  Similarity=0.139  Sum_probs=155.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.+...                        ....+.+|+.|.++
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~------------------------~~~~~~~Dv~~~~~   80 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA------------------------ADLHLPGDLREAAY   80 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC------------------------CSEECCCCTTSHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH------------------------hhhccCcCCCCHHH
Confidence            456789999999999999999999999999999999875321                        22445799999887


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +..++       +++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||...... 
T Consensus        81 ~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-  159 (266)
T 3uxy_A           81 ADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-  159 (266)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC-
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-
Confidence            76655       479999999996532      22334566889999999999987    4567789999999866432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cce------eecccCcccCCCCCH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI------TLSQEDTLFGGQVSN  285 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~------~~~~~~~~~~g~V~v  285 (530)
                           ......|+.+|++++.+++.       .|+++++|+||+|+++....... ...      .........+.+.++
T Consensus       160 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  234 (266)
T 3uxy_A          160 -----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEP  234 (266)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCH
Confidence                 23456899999999988752       58999999999999874221100 000      001112233456899


Q ss_pred             HHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          286 LQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +|||+++++++.+.. +..|++|++.++..+
T Consensus       235 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          235 EDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999999999998753 346999999988643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.89  E-value=3.7e-23  Score=206.75  Aligned_cols=209  Identities=14%  Similarity=0.136  Sum_probs=156.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+|+||||||+|+||+++++.|+++|++|++++|+....                       ...+.++.+|++|.+
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-----------------------~~~~~~~~~Dv~~~~   66 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-----------------------VNVSDHFKIDVTNEE   66 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-----------------------TTSSEEEECCTTCHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-----------------------cCceeEEEecCCCHH
Confidence            356789999999999999999999999999999999987532                       135688999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          156 QIEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      ++.++++       ++|+||||||.....      ..++...+++|+.++.++++++.    +.+.++||++||......
T Consensus        67 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  146 (269)
T 3vtz_A           67 EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA  146 (269)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC
Confidence            8877764       799999999964321      22345568899999999888865    356789999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccc-----------cceeecccCcccCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGG  281 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~-----------~~~~~~~~~~~~~g  281 (530)
                            ......|+.+|++.+.+.+.      .++++++|+||+|+++.......           ..+.........+.
T Consensus       147 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  220 (269)
T 3vtz_A          147 ------TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGR  220 (269)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSS
T ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCC
Confidence                  23456899999999988763      38999999999999864211100           00000111223345


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +.+++|||+++++++.+. .+..|++|+|.++.
T Consensus       221 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          221 IGRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            689999999999999865 33569999999885

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=1.5e-22  Score=199.15  Aligned_cols=218  Identities=16%  Similarity=0.120  Sum_probs=162.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      |..+|+||||||+|+||+++++.|+++|++|+++ .|+.++...+.+.+...             ..++.++.+|+.|.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~   70 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN-------------GGSAFSIGANLESLH   70 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT-------------TCEEEEEECCTTSHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc-------------CCceEEEecCcCCHH
Confidence            5678899999999999999999999999999986 56666666665555432             257889999999998


Q ss_pred             hHHHHhC-------------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          156 QIEPALG-------------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~~-------------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      +++.+++             .+|+||||||.....      ..++...+++|+.++.++++++...  +.++||++||..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~  150 (255)
T 3icc_A           71 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  150 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred             HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence            8776663             389999999964322      2224556889999999999999865  445999999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v  285 (530)
                      ....      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.........  ..........+.+.++
T Consensus       151 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
T 3icc_A          151 TRIS------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEV  224 (255)
T ss_dssp             GTSC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCH
T ss_pred             hccC------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCH
Confidence            6332      23356799999999977652       6899999999999887543211111  1111112233456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|+|+++++++.+. .+..|+++++.++.
T Consensus       225 ~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          225 EDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            99999999999754 33579999998874

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.89  E-value=4.1e-23  Score=207.20  Aligned_cols=216  Identities=11%  Similarity=0.085  Sum_probs=163.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++...+.+++...             ..++.++.+|+.|.+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~~   97 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS-------------GGTAQELAGDLSEAGAG   97 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT-------------TCCEEEEECCTTSTTHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------------CCeEEEEEecCCCHHHH
Confidence            56789999999999999999999999999999999998888777665543             26799999999999888


Q ss_pred             HHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .++++      ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......   
T Consensus        98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---  174 (275)
T 4imr_A           98 TDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP---  174 (275)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---
Confidence            77764      79999999996432      223345678999999999988874    456679999999876432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cc-e-eecccCcccCCCCCHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HN-I-TLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~-~-~~~~~~~~~~g~V~v~DVA~  290 (530)
                         ......|+.+|++.+.+.+.       .|+++++|+||+|.++.......  .. . .+.......+.+...+|+|+
T Consensus       175 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~  251 (275)
T 4imr_A          175 ---KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVG  251 (275)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHH
Confidence               23456799999999987752       58999999999998863211100  00 0 00000112345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      ++++++.+. .+..|++++|.++
T Consensus       252 ~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          252 AALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHcCcccCCCCCCEEEeCCC
Confidence            999999865 3356899998876

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.89  E-value=9.6e-23  Score=199.59  Aligned_cols=208  Identities=17%  Similarity=0.144  Sum_probs=151.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||+++++.|+++|++|++++|+.++..   +.   .               ++.++.+|+.| +++.+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~---~---------------~~~~~~~D~~~-~~~~~   59 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA---QS---L---------------GAVPLPTDLEK-DDPKG   59 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---HH---H---------------TCEEEECCTTT-SCHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---Hh---h---------------CcEEEecCCch-HHHHH
Confidence            578999999999999999999999999999999986521   11   1               26788999999 76665


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       +++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||........  
T Consensus        60 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  137 (239)
T 2ekp_A           60 LVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG--  137 (239)
T ss_dssp             HHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--
Confidence            54       579999999996432      222345678999999998888874    45778999999986643210  


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccce-eecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~~-~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|++.+.+.+.       .|+++++||||+|.++...... .... .........+.+.+++|+|++++
T Consensus       138 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  215 (239)
T 2ekp_A          138 --PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAA  215 (239)
T ss_dssp             --TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              13456899999999987653       5999999999999987432110 0000 00001122345689999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++.+. .+..|+++++.++.
T Consensus       216 ~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          216 VLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHTSGGGTTCCSCEEEESTTT
T ss_pred             HHcCchhcCCCCCEEEECCCc
Confidence            999764 33468899888874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.89  E-value=1.3e-22  Score=200.62  Aligned_cols=203  Identities=15%  Similarity=0.063  Sum_probs=153.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||||||+||||+++++.|++ +|++|++++|+.++...+.+.+...             ..+++++.+|+.|.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dl~~~~~   68 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-------------GLSPRFHQLDIDDLQS   68 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-------------TCCCEEEECCTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-------------CCeeEEEECCCCCHHH
Confidence            3468999999999999999999999 9999999999988777766555432             1578999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccCC--C
Q 009648          157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKF--G  219 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~~--~  219 (530)
                      +.++++       ++|+||||||......      .++...+++|+.++.+|++++....  .++||++||..+...  +
T Consensus        69 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~  148 (276)
T 1wma_A           69 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKS  148 (276)
T ss_dssp             HHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhccccc
Confidence            887775       8999999999653221      2335568999999999999998752  359999999754311  0


Q ss_pred             --------------Cccc-------------------cccchhHHHHHHHHHHHHHHH-----------CCCCEEEEEcC
Q 009648          220 --------------FPAA-------------------ILNLFWGVLLWKRKAEEALIA-----------SGLPYTIVRPG  255 (530)
Q Consensus       220 --------------~~~~-------------------~~~~~~~Y~~sK~~~E~~l~~-----------~gl~~tIvRPg  255 (530)
                                    .++.                   ...+...|+.+|++.+.+++.           .|+++++|+||
T Consensus       149 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG  228 (276)
T 1wma_A          149 CSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPG  228 (276)
T ss_dssp             SCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECC
T ss_pred             CChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCC
Confidence                          0000                   011336899999998877652           48999999999


Q ss_pred             cccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC---CCCCcEEE
Q 009648          256 GMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS---LSYCKVVE  308 (530)
Q Consensus       256 ~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~---~~~g~vyn  308 (530)
                      +|.++....               ..+++.+|+|+++++++.++.   ...|+.|+
T Consensus       229 ~v~t~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          229 WVRTDMAGP---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             SBCSTTTCT---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             ccccCcCCc---------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            998864321               246899999999999998552   23455554

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.89  E-value=1.7e-22  Score=202.70  Aligned_cols=220  Identities=10%  Similarity=0.112  Sum_probs=159.8

Q ss_pred             CCCCCCCCEEEEECCCcH--HHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC
Q 009648           74 KADSKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (530)
Q Consensus        74 ~~~~~~~k~VLVTGAtG~--IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl  151 (530)
                      .|.+.++|+||||||+|+  ||+++++.|+++|++|++++|+.  .....+.+.+.             ..++.++.+|+
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-------------~~~~~~~~~Dl   84 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-------------FNPAAVLPCDV   84 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-------------GCCSEEEECCT
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-------------cCCceEEEeec
Confidence            344567899999999966  99999999999999999999987  11222222211             14689999999


Q ss_pred             CCHhhHHHHh-------CCCcEEEEcccCCCC-----------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEE
Q 009648          152 EKRVQIEPAL-------GNASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMV  210 (530)
Q Consensus       152 ~d~~sl~~a~-------~~vD~VI~~Ag~~~~-----------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~i  210 (530)
                      +|.+++++++       +.+|+||||||....           +..++...+++|+.++.++++++...   +.++||++
T Consensus        85 ~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~i  164 (280)
T 3nrc_A           85 ISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVAL  164 (280)
T ss_dssp             TCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence            9998887776       367999999996532           22334567899999999999998753   35799999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCC
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGG  281 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g  281 (530)
                      ||......      ......|+.+|++.+.+++.       .|+++++|+||+|.++.........  ..........+.
T Consensus       165 sS~~~~~~------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~  238 (280)
T 3nrc_A          165 TYIGAEKA------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKK  238 (280)
T ss_dssp             ECGGGTSC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCS
T ss_pred             eccccccC------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCC
Confidence            99866432      23456899999999987652       6899999999999987533211100  000111122345


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +.+.+|+|+++++++.+. ....|+++++.++..
T Consensus       239 ~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          239 NVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             CCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence            689999999999999764 335799999998854

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=1e-22  Score=200.62  Aligned_cols=207  Identities=14%  Similarity=0.075  Sum_probs=151.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||++++++|+++|++|++++|+.++.+                        .+..+.+|+.|.+++
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------------~~~~~~~D~~~~~~~   68 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------------GLFGVEVDVTDSDAV   68 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------------TSEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------------HhcCeeccCCCHHHH
Confidence            56789999999999999999999999999999999875322                        222478999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||......  
T Consensus        69 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--  146 (247)
T 1uzm_A           69 DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG--  146 (247)
T ss_dssp             HHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC--
Confidence            77663       68999999996432      223356678999999999988875    356789999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++.+.+++.       .|+++++||||+|.++...................+.+++++|+|++++
T Consensus       147 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~  222 (247)
T 1uzm_A          147 ----IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS  222 (247)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHH
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence                12356799999998877653       6899999999999876321100000000001112245689999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++.+. .+..|++|++.++..
T Consensus       223 ~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          223 FLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHcCccccCCcCCEEEECCCcc
Confidence            999764 334689999988753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-22  Score=207.06  Aligned_cols=216  Identities=15%  Similarity=0.065  Sum_probs=160.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-  155 (530)
                      +.+++||||||+|+||+++++.|+++|++|++++ |+.++.+.+.+++...        .    ..++.++.+|+.|.+ 
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~--------~----~~~~~~~~~Dl~d~~~  111 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--------R----PNSAITVQADLSNVAT  111 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--------S----TTCEEEEECCCSSSCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh--------c----CCeEEEEEeeCCCchh
Confidence            5678999999999999999999999999999999 9988777766555311        0    157899999999988 


Q ss_pred             ----------------hHHHHhC-------CCcEEEEcccCCCCc--------------------cCCCCcchHhHHHHH
Q 009648          156 ----------------QIEPALG-------NASVVICCIGASEKE--------------------VFDITGPYRIDFQAT  192 (530)
Q Consensus       156 ----------------sl~~a~~-------~vD~VI~~Ag~~~~~--------------------~~~~~~~~~vNv~gt  192 (530)
                                      +++++++       ++|+||||||.....                    ..++...+++|+.++
T Consensus       112 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~  191 (328)
T 2qhx_A          112 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAP  191 (328)
T ss_dssp             CC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHH
T ss_pred             ccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHH
Confidence                            7777664       799999999964321                    222345689999999


Q ss_pred             HHHHHHHH----hcC------CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcC
Q 009648          193 KNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPG  255 (530)
Q Consensus       193 ~~Ll~aa~----~~g------v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg  255 (530)
                      .++++++.    +.+      .++||++||......      ......|+.+|++++.+.+.       .|+++++|+||
T Consensus       192 ~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  265 (328)
T 2qhx_A          192 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG  265 (328)
T ss_dssp             HHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            99888876    344      679999999876432      23456799999999987753       58999999999


Q ss_pred             cccCCCcccccccceeecccCcccC-CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          256 GMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       256 ~V~Gp~~~~~~~~~~~~~~~~~~~~-g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|.++. .... ............+ .+.+.+|||+++++++.+. .+..|++|++.++.
T Consensus       266 ~v~T~~-~~~~-~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          266 LSVLVD-DMPP-AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             SBSCCC-CSCH-HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccCCc-cccH-HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            999886 2110 0000000112223 4678999999999999753 33468899988874

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.89  E-value=2.2e-22  Score=199.84  Aligned_cols=220  Identities=12%  Similarity=0.098  Sum_probs=161.3

Q ss_pred             CCCCEEEEECCCcH--HHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~--IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++|+||||||+|+  ||+++++.|+++|++|++++|+....+.+.+...+.            ...++.++.+|++|.+
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~   72 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL------------DRNDSIILPCDVTNDA   72 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS------------SSCCCEEEECCCSSSH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc------------CCCCceEEeCCCCCHH
Confidence            56789999999988  999999999999999999999976555444333221            1237999999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      +++++++       ++|+||||||....          +..++...+++|+.++.++++++...  +.++||++||....
T Consensus        73 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~  152 (266)
T 3oig_A           73 EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE  152 (266)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence            8877763       78999999996531          11223456899999999999999865  23599999998664


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~D  287 (530)
                      ..      ......|+.+|++.+.+.+.       .|+++++|+||+|.++.........  ..........+.+.+.+|
T Consensus       153 ~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d  226 (266)
T 3oig_A          153 LV------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEE  226 (266)
T ss_dssp             SC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             cc------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHH
Confidence            32      23456799999999987652       5899999999999886432111100  000011122345689999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      +|+++++++.+. ....|+++++.++...
T Consensus       227 va~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          227 VGDTAAFLFSDMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHcCCchhcCcCCEEEECCCeEE
Confidence            999999999864 3356899999988643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.89  E-value=6.1e-22  Score=196.15  Aligned_cols=207  Identities=10%  Similarity=0.036  Sum_probs=157.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+++||+++++.|+++|++|++++|+.++..++.+                 ...++.++.+|++|.+++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~~~~v~~   64 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-----------------ERPNLFYFHGDVADPLTLKK   64 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-----------------TCTTEEEEECCTTSHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------------hcCCEEEEEecCCCHHHHHH
Confidence            4799999999999999999999999999999999877665432                 12578999999999988776


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCccc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      ++       +++|++|||||....      +..++...+++|+.++..+.+++..+   +.++||++||......     
T Consensus        65 ~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~-----  139 (247)
T 3ged_A           65 FVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS-----  139 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC-----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC-----
Confidence            65       579999999996432      23346677999999998888776532   3379999999866432     


Q ss_pred             cccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          224 ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                       ......|+.+|+.+..+.+.      .|++++.|.||+|..+........    .......+.+...+|||+++++|+.
T Consensus       140 -~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~----~~~~~Pl~R~g~pediA~~v~fL~s  214 (247)
T 3ged_A          140 -EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQE----DCAAIPAGKVGTPKDISNMVLFLCQ  214 (247)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHH----HHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHH----HHhcCCCCCCcCHHHHHHHHHHHHh
Confidence             12346799999998877652      589999999999987643211100    0112233456789999999999998


Q ss_pred             CCCCCCCcEEEEeCCCC
Q 009648          298 NRSLSYCKVVEVIAETT  314 (530)
Q Consensus       298 ~~~~~~g~vynv~~~~~  314 (530)
                      +. +..|+++.|.++..
T Consensus       215 ~~-~iTG~~i~VDGG~s  230 (247)
T 3ged_A          215 QD-FITGETIIVDGGMS  230 (247)
T ss_dssp             CS-SCCSCEEEESTTGG
T ss_pred             CC-CCCCCeEEECcCHH
Confidence            64 57899999998854

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.89  E-value=1.6e-22  Score=202.34  Aligned_cols=216  Identities=13%  Similarity=0.089  Sum_probs=156.6

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|+||||||+  |+||+++++.|+++|++|++++|+.. .....+.+.+.             .+++.++.+|+.|.+
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~-------------~~~~~~~~~D~~~~~   69 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-------------LNSPYVYELDVSKEE   69 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-------------TTCCCEEECCTTCHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh-------------cCCcEEEEcCCCCHH
Confidence            457899999999  99999999999999999999999975 33222333221             134788999999998


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCcc
Q 009648          156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~  216 (530)
                      ++.++++       ++|+||||||....          +..++...+++|+.++.++++++...  +.++||++||.+..
T Consensus        70 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~  149 (275)
T 2pd4_A           70 HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST  149 (275)
T ss_dssp             HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc
Confidence            8877764       78999999996532          12234567899999999999999875  12599999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-ccee-ecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~~~-~~~~~~~~~g~V~v~D  287 (530)
                      ..      ......|+.+|++.+.+++.       .|+++++|+||+|.++....... .... ........+.+.+.+|
T Consensus       150 ~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d  223 (275)
T 2pd4_A          150 KY------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE  223 (275)
T ss_dssp             SB------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred             CC------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHH
Confidence            32      23356799999999887752       59999999999999875321110 0000 0000112234678999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|+++++++.+. ....|++|++.++.
T Consensus       224 va~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          224 VGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999754 33468889888874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.89  E-value=3.6e-22  Score=200.91  Aligned_cols=204  Identities=13%  Similarity=0.080  Sum_probs=149.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...         +   ...+.++.+|++|.+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~Dv~d~~~v   98 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR---------T---GNIVRAVVCDVGDPDQV   98 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------H---SSCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C---CCeEEEEEcCCCCHHHH
Confidence            56789999999999999999999999999999999998888777665543         1   13468999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHh----cC--CCEEEEEcCCCccC
Q 009648          158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~----~g--v~r~V~iSS~~v~~  217 (530)
                      .+++       +++|+||||||....       +..++...+++|+.++.++++++..    .+  .++||++||.....
T Consensus        99 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  178 (281)
T 4dry_A           99 AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT  178 (281)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC
Confidence            7766       468999999996422       2233456799999998888777653    33  46999999986633


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .      ......|+.+|++.+.+.+.       .|+++++|+||+|.++........ ..........+.+++.+|||+
T Consensus       179 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~pedvA~  251 (281)
T 4dry_A          179 P------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-VLQANGEVAAEPTIPIEHIAE  251 (281)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-EECTTSCEEECCCBCHHHHHH
T ss_pred             C------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-hhhhhhcccccCCCCHHHHHH
Confidence            2      23456799999999987652       689999999999988743221111 111111122345689999999


Q ss_pred             HHHHHHhCCC
Q 009648          291 LLACMAKNRS  300 (530)
Q Consensus       291 ai~~ll~~~~  300 (530)
                      ++++++.++.
T Consensus       252 ~v~fL~s~~~  261 (281)
T 4dry_A          252 AVVYMASLPL  261 (281)
T ss_dssp             HHHHHHHSCT
T ss_pred             HHHHHhCCCc
Confidence            9999999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.89  E-value=9.8e-23  Score=202.77  Aligned_cols=219  Identities=12%  Similarity=0.028  Sum_probs=165.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.++|++|||||+++||+++++.|+++|++|++++|+.+++++..+++.+.             ..++.++.+|++|.+
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-------------g~~~~~~~~Dv~~~~   71 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-------------GYDAHGVAFDVTDEL   71 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-------------TCCEEECCCCTTCHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEeeCCCHH
Confidence            4578999999999999999999999999999999999999888877766543             257899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----h-cCCCEEEEEcCCCccC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----I-AKVNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~-~gv~r~V~iSS~~v~~  217 (530)
                      ++++++       +++|++|||||....      +..+|...+++|+.++..+.+++.    + .+.++||++||.....
T Consensus        72 ~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~  151 (255)
T 4g81_D           72 AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA  151 (255)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC
Confidence            887766       468999999996432      334467779999999988877754    2 3557999999987643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce-eecccCcccCCCCCHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~-~~~~~~~~~~g~V~v~DV  288 (530)
                      .      ......|+.+|+.+..+.+       ..||+++.|.||+|.++....... ... .........+.+...+||
T Consensus       152 ~------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi  225 (255)
T 4g81_D          152 A------RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEEL  225 (255)
T ss_dssp             B------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGG
T ss_pred             C------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHH
Confidence            2      2234679999999988776       279999999999998874321110 000 000112233456789999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++++|+.+. .+..|+++.|.++.
T Consensus       226 A~~v~fL~S~~a~~iTG~~i~VDGG~  251 (255)
T 4g81_D          226 IGTAIFLSSKASDYINGQIIYVDGGW  251 (255)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhCCCcCCEEEECCCe
Confidence            99999999764 34578999888874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.89  E-value=2.6e-22  Score=202.73  Aligned_cols=217  Identities=15%  Similarity=0.066  Sum_probs=159.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.+|+||||||+|+||+++++.|+++|++|++++ |+.++...+.+++...        .    ..++.++.+|+.|.+
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~--------~----~~~~~~~~~Dl~~~~   73 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--------R----PNSAITVQADLSNVA   73 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--------S----TTCEEEEECCCSSSC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh--------c----CCeeEEEEeecCCcc
Confidence            35678999999999999999999999999999999 9988777766555411        0    157899999999988


Q ss_pred             -----------------hHHHHhC-------CCcEEEEcccCCCCc--------------------cCCCCcchHhHHHH
Q 009648          156 -----------------QIEPALG-------NASVVICCIGASEKE--------------------VFDITGPYRIDFQA  191 (530)
Q Consensus       156 -----------------sl~~a~~-------~vD~VI~~Ag~~~~~--------------------~~~~~~~~~vNv~g  191 (530)
                                       ++.++++       ++|+||||||.....                    ..++...+++|+.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g  153 (291)
T 1e7w_A           74 TAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA  153 (291)
T ss_dssp             BCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHH
T ss_pred             cccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHH
Confidence                             7777664       799999999964321                    22344668999999


Q ss_pred             HHHHHHHHH----hcC------CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEc
Q 009648          192 TKNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRP  254 (530)
Q Consensus       192 t~~Ll~aa~----~~g------v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRP  254 (530)
                      +.++++++.    +.+      .++||++||......      ......|+.+|++.+.+.+.       .|++++.|+|
T Consensus       154 ~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  227 (291)
T 1e7w_A          154 PYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP  227 (291)
T ss_dssp             HHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCC------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEee
Confidence            999988876    344      579999999876332      23456799999999877652       6899999999


Q ss_pred             CcccCCCcccccccceeecccCcccC-CCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          255 GGMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       255 g~V~Gp~~~~~~~~~~~~~~~~~~~~-g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+|.++. . ...............+ .+.+.+|||+++++++.+. .+..|+++++.++.
T Consensus       228 G~v~T~~-~-~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          228 GLSVLVD-D-MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             SSBCCGG-G-SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCccCCc-c-CCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            9998765 2 1000000001111223 4678999999999999754 33568899888874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.89  E-value=2.9e-22  Score=196.24  Aligned_cols=190  Identities=16%  Similarity=0.075  Sum_probs=144.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+.                .++.++.+|++|.+++++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v~~   66 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----------------NAVIGIVADLAHHEDVDV   66 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTSHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------CCceEEECCCCCHHHHHH
Confidence            5789999999999999999999999999999999887776654321                358999999999988877


Q ss_pred             HhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCccc
Q 009648          160 ALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       160 a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      +++       ++|+||||||....      +..++...+++|+.++.++++++...   ..++||++||......     
T Consensus        67 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~-----  141 (235)
T 3l6e_A           67 AFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG-----  141 (235)
T ss_dssp             HHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS-----
T ss_pred             HHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC-----
Confidence            663       68999999996432      22335667999999999998887532   1239999999765332     


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA  296 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll  296 (530)
                       ......|+.+|++.+.+.+.       .|+++++|+||+|.++......         ......+++.+|+|+++++++
T Consensus       142 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~pedvA~~v~~l~  211 (235)
T 3l6e_A          142 -KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---------HVDPSGFMTPEDAAAYMLDAL  211 (235)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHHHT
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC---------CCCCcCCCCHHHHHHHHHHHH
Confidence             23356899999999987762       6899999999999876422110         011225689999999999999


Q ss_pred             hCCC
Q 009648          297 KNRS  300 (530)
Q Consensus       297 ~~~~  300 (530)
                      .++.
T Consensus       212 ~~~~  215 (235)
T 3l6e_A          212 EARS  215 (235)
T ss_dssp             CCCS
T ss_pred             hCCC
Confidence            8664

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.89  E-value=5e-22  Score=203.57  Aligned_cols=207  Identities=15%  Similarity=0.054  Sum_probs=148.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+|+||++|+++|+++|++|++++|+.++.+.+.+.+...         +  ...++.++.+|++|.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~---------~--~~~~~~~~~~Dl~~~~~   73 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE---------G--SGPEVMGVQLDVASREG   73 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------T--CGGGEEEEECCTTCHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C--CCCeEEEEECCCCCHHH
Confidence            356789999999999999999999999999999999999888877666543         1  11378999999999998


Q ss_pred             HHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----------CCCEEEEEcCC
Q 009648          157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------gv~r~V~iSS~  213 (530)
                      +.++++       ++|+||||||....      +..++...+++|+.|+.++++++...          +.++||++||.
T Consensus        74 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~  153 (319)
T 3ioy_A           74 FKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASM  153 (319)
T ss_dssp             HHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCG
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccc
Confidence            887764       67999999996432      22234567999999999998887642          35689999998


Q ss_pred             CccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceee------------cc
Q 009648          214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL------------SQ  274 (530)
Q Consensus       214 ~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~------------~~  274 (530)
                      .+...      ......|+.+|.+++.+.+       ..|+++++|+||+|.++...........+            ..
T Consensus       154 a~~~~------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (319)
T 3ioy_A          154 AAFLA------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVER  227 (319)
T ss_dssp             GGTCC------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------------
T ss_pred             ccccC------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHH
Confidence            76332      2234679999997665553       26899999999999887432211000000            00


Q ss_pred             cCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          275 EDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       275 ~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ........++++|+|++++.+++++.
T Consensus       228 ~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          228 LAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             -CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             HHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            00011112799999999999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.89  E-value=5.2e-22  Score=196.59  Aligned_cols=201  Identities=13%  Similarity=0.099  Sum_probs=150.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..++++||||||+|+||++|+++|+++|   ++|++++|+.++...+.+ +...             ..++.++.+|+.|
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-l~~~-------------~~~~~~~~~Dl~~   83 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN-------------HSNIHILEIDLRN   83 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH-------------CTTEEEEECCTTC
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-hhcc-------------CCceEEEEecCCC
Confidence            3567899999999999999999999999   999999999876654422 2211             2579999999999


Q ss_pred             HhhHHHHhC---------CCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHHHhc----------C----
Q 009648          154 RVQIEPALG---------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATIA----------K----  203 (530)
Q Consensus       154 ~~sl~~a~~---------~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------g----  203 (530)
                      .++++++++         ++|+||||||... .      ...++...+++|+.++.++++++...          +    
T Consensus        84 ~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~  163 (267)
T 1sny_A           84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGV  163 (267)
T ss_dssp             GGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSST
T ss_pred             hHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccC
Confidence            998888775         7999999999654 1      12234557899999999999887643          2    


Q ss_pred             -CCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeeccc
Q 009648          204 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQE  275 (530)
Q Consensus       204 -v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~  275 (530)
                       .++||++||........   ...+...|+.+|++++.+++.       .|+++++||||+|.++....           
T Consensus       164 ~~~~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------  229 (267)
T 1sny_A          164 GRAAIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------  229 (267)
T ss_dssp             TTCEEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------
T ss_pred             CCceEEEEecccccccCC---CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------
Confidence             47999999986633211   112456799999999987753       58999999999998764311           


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCCCCC-CCcEEEE
Q 009648          276 DTLFGGQVSNLQVAELLACMAKNRSLS-YCKVVEV  309 (530)
Q Consensus       276 ~~~~~g~V~v~DVA~ai~~ll~~~~~~-~g~vynv  309 (530)
                          ...++.+|+|+.++.++.+.... .|..|++
T Consensus       230 ----~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~  260 (267)
T 1sny_A          230 ----SAPLDVPTSTGQIVQTISKLGEKQNGGFVNY  260 (267)
T ss_dssp             ----TCSBCHHHHHHHHHHHHHHCCGGGTTCEECT
T ss_pred             ----CCCCCHHHHHHHHHHHHHhcCcCCCCcEEcc
Confidence                24578999999999999865432 3444443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.89  E-value=3.8e-22  Score=200.93  Aligned_cols=211  Identities=10%  Similarity=0.026  Sum_probs=156.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-------hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-------RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-------k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+.+       .++.+.+.+...             ..++.++.+
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~   72 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA-------------GGQALPIVG   72 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH-------------TSEEEEEEC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc-------------CCcEEEEEC
Confidence            356789999999999999999999999999999999986       344444444432             257899999


Q ss_pred             cCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcC
Q 009648          150 DLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSS  212 (530)
Q Consensus       150 Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS  212 (530)
                      |++|.++++++++       ++|+||||||....      +..++...+++|+.++.++++++...    +.++||++||
T Consensus        73 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  152 (285)
T 3sc4_A           73 DIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP  152 (285)
T ss_dssp             CTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence            9999988877764       79999999996532      22234566889999999999988654    5679999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCc-ccCCCcccccccceeecccCcccCCCCC
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~-V~Gp~~~~~~~~~~~~~~~~~~~~g~V~  284 (530)
                      .......     ......|+.+|++.+.+.+.       .|++++.|+||+ +.++....       ........+.+.+
T Consensus       153 ~~~~~~~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-------~~~~~~~~~r~~~  220 (285)
T 3sc4_A          153 PIRLEPK-----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-------LLGGDEAMARSRK  220 (285)
T ss_dssp             CCCCSGG-----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-------HHTSCCCCTTCBC
T ss_pred             hhhccCC-----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-------hccccccccCCCC
Confidence            7653221     12346799999999987652       689999999995 44331110       0011122345678


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      .+|+|+++++++.+.....|+++.+.++
T Consensus       221 pedvA~~~~~l~s~~~~~tG~~i~~dgg  248 (285)
T 3sc4_A          221 PEVYADAAYVVLNKPSSYTGNTLLCEDV  248 (285)
T ss_dssp             THHHHHHHHHHHTSCTTCCSCEEEHHHH
T ss_pred             HHHHHHHHHHHhCCcccccceEEEEcCc
Confidence            9999999999999876556777755543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=3.9e-22  Score=197.11  Aligned_cols=199  Identities=15%  Similarity=0.109  Sum_probs=149.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++....          ....++.++.+|++|.+++
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v   74 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN----------KHVQEPIVLPLDITDCTKA   74 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC----------TTSCCCEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc----------cccCcceEEeccCCCHHHH
Confidence            457899999999999999999999999999999999988888776665430          0125789999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCCcc-----CCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 EPAL-------GNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~-----~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .+++       +++|+||||||......     .++...+++|+.++.++++++.    +.+.++||++||......   
T Consensus        75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---  151 (250)
T 3nyw_A           75 DTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG---  151 (250)
T ss_dssp             HHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC---
Confidence            7766       47899999999643221     2345678999999999988874    456679999999866432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ..+...|+.+|++.+.+.+.       .|++++.|+||+|.++......        .......+++.+|+|+++++
T Consensus       152 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          152 ---FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG--------TPFKDEEMIQPDDLLNTIRC  220 (250)
T ss_dssp             ----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT--------CCSCGGGSBCHHHHHHHHHH
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC--------CCcccccCCCHHHHHHHHHH
Confidence               12256799999999877652       5899999999999875321110        11112346899999999999


Q ss_pred             HHhCCC
Q 009648          295 MAKNRS  300 (530)
Q Consensus       295 ll~~~~  300 (530)
                      ++.++.
T Consensus       221 l~s~~~  226 (250)
T 3nyw_A          221 LLNLSE  226 (250)
T ss_dssp             HHTSCT
T ss_pred             HHcCCC
Confidence            998764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.88  E-value=3e-22  Score=197.50  Aligned_cols=213  Identities=15%  Similarity=0.068  Sum_probs=152.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-h
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~  155 (530)
                      +++|+||||||+|+||++++++|+++|++ |++++|+... .. .+.+.+.           ....+++++.+|+.|. +
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~-~~~l~~~-----------~~~~~~~~~~~D~~~~~~   69 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TA-LAELKAI-----------NPKVNITFHTYDVTVPVA   69 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HH-HHHHHHH-----------CTTSEEEEEECCTTSCHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HH-HHHHHHh-----------CCCceEEEEEEecCCChH
Confidence            45789999999999999999999999996 9999998742 11 1222211           0124689999999997 7


Q ss_pred             hHHHHhC-------CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc----C---CCEEEEEcCCCccCCCCc
Q 009648          156 QIEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       156 sl~~a~~-------~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~----g---v~r~V~iSS~~v~~~~~~  221 (530)
                      ++.++++       ++|+||||||..  ...++...+++|+.++.++++++...    +   .++||++||......   
T Consensus        70 ~~~~~~~~~~~~~g~id~lv~~Ag~~--~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---  144 (254)
T 1sby_A           70 ESKKLLKKIFDQLKTVDILINGAGIL--DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA---  144 (254)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCC--CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC--CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccC---
Confidence            7766663       799999999974  33556778999999999999988742    2   468999999876432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeec--ccCcccCCCCCHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~--~~~~~~~g~V~v~DVA~ai  292 (530)
                         ......|+.+|++.+.+++.       .|+++++||||+|.++.........-...  ..........+++|+|+++
T Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  221 (254)
T 1sby_A          145 ---IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             ---CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence               22356799999999987653       68999999999999874321100000000  0000011234899999999


Q ss_pred             HHHHhCCCCCCCcEEEEeCCC
Q 009648          293 ACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~~~~g~vynv~~~~  313 (530)
                      +++++..  ..|++|++.++.
T Consensus       222 ~~~~~~~--~~G~~~~v~gG~  240 (254)
T 1sby_A          222 VKAIEAN--KNGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHC--CTTCEEEEETTE
T ss_pred             HHHHHcC--CCCCEEEEeCCc
Confidence            9999754  368999998873

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.88  E-value=4.7e-22  Score=196.13  Aligned_cols=212  Identities=13%  Similarity=0.069  Sum_probs=157.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|++|||||+++||+++++.|+++|++|++++|+.++++.                   ....++..+.+|++|.++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------------~~~~~~~~~~~Dv~~~~~   68 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------------PRHPRIRREELDITDSQR   68 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------------CCCTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------------hhcCCeEEEEecCCCHHH
Confidence            3578999999999999999999999999999999999865432                   123689999999999988


Q ss_pred             HHHHh---CCCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCcccccc
Q 009648          157 IEPAL---GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILN  226 (530)
Q Consensus       157 l~~a~---~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~  226 (530)
                      +++++   +++|++|||||....    +..+|...+++|+.++..+.+++..+   +.++||++||......      ..
T Consensus        69 v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~------~~  142 (242)
T 4b79_A           69 LQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG------SA  142 (242)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC------CS
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC------CC
Confidence            87766   578999999996432    23346677999999998888776532   2379999999866332      22


Q ss_pred             chhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      ....|+.+|+.+..+.+       ..||+++.|.||+|.++.........  ..........+.+...+|||+++++|+.
T Consensus       143 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS  222 (242)
T 4b79_A          143 DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCG  222 (242)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            34679999999988766       27999999999999887432211100  0001112334456789999999999997


Q ss_pred             CCC-CCCCcEEEEeCCC
Q 009648          298 NRS-LSYCKVVEVIAET  313 (530)
Q Consensus       298 ~~~-~~~g~vynv~~~~  313 (530)
                      +.. +..|+++.|.++.
T Consensus       223 d~a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          223 PGASFVTGAVLAVDGGY  239 (242)
T ss_dssp             GGGTTCCSCEEEESTTG
T ss_pred             chhcCccCceEEECccH
Confidence            653 4578899888763

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.88  E-value=1.4e-22  Score=199.58  Aligned_cols=206  Identities=13%  Similarity=0.156  Sum_probs=144.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++..                       .  . +.+|+.|.++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~--~-~~~Dl~~~~~v~~~   55 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------------------A--D-LSTAEGRKQAIADV   55 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C--C-TTSHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------------------c--c-cccCCCCHHHHHHH
Confidence            68999999999999999999999999999999875311                       0  1 55899999999888


Q ss_pred             hC----CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC----cc------
Q 009648          161 LG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF----PA------  222 (530)
Q Consensus       161 ~~----~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~----~~------  222 (530)
                      ++    ++|+||||||.... ...+...+++|+.++.++++++.    +.+.++||++||..+.....    ..      
T Consensus        56 ~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~  134 (257)
T 1fjh_A           56 LAKCSKGMDGLVLCAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAG  134 (257)
T ss_dssp             HTTCTTCCSEEEECCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHT
T ss_pred             HHHhCCCCCEEEECCCCCCC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhccc
Confidence            85    45999999997541 23467789999999999988876    45668999999987642100    00      


Q ss_pred             ------------ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-cccc--eeecccCcccC
Q 009648          223 ------------AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN--ITLSQEDTLFG  280 (530)
Q Consensus       223 ------------~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~~~~--~~~~~~~~~~~  280 (530)
                                  ........|+.+|.+.+.+++.       .|+++++|+||+|.++..... ....  ..........+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (257)
T 1fjh_A          135 EEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             CHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT
T ss_pred             chhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccC
Confidence                        1122456899999999988753       689999999999998753221 1000  00000011233


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+++++|+|+++++++.++. ...|++|++.++.
T Consensus       215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            56899999999999997653 3468899888874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.88  E-value=1.9e-22  Score=198.12  Aligned_cols=206  Identities=13%  Similarity=0.080  Sum_probs=155.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++|+||||||+|+||+++++.|++ .|+.|++++|+...                       ....+.++.+|++|.+++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------------------~~~~~~~~~~Dv~~~~~v   59 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------------------SAENLKFIKADLTKQQDI   59 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------------------CCTTEEEEECCTTCHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------------------ccccceEEecCcCCHHHH
Confidence            467899999999999999999999 78999999987641                       125689999999999998


Q ss_pred             HHHhC-----CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcC--CCEEEEEcCCCccCCCCcccc
Q 009648          158 EPALG-----NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       158 ~~a~~-----~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~g--v~r~V~iSS~~v~~~~~~~~~  224 (530)
                      .++++     ++|+||||||....      +..++...+++|+.++.++++++...-  .++||++||......      
T Consensus        60 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  133 (244)
T 4e4y_A           60 TNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA------  133 (244)
T ss_dssp             HHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC------
T ss_pred             HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC------
Confidence            88875     78999999996432      222345678999999999999987652  258999999866432      


Q ss_pred             ccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-----------ceeecccCcccCCCCCHH
Q 009648          225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----------NITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-----------~~~~~~~~~~~~g~V~v~  286 (530)
                      ......|+.+|++.+.+.+       ..|+++++|+||+|.++........           ...........+.+.+++
T Consensus       134 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  213 (244)
T 4e4y_A          134 KPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ  213 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH
Confidence            2335679999999998876       3689999999999988742211000           000011122334578999


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |+|+++++++.+.. +..|+++++.++.
T Consensus       214 dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          214 EIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhcCccccccCCeEeECCCc
Confidence            99999999997643 3468999998874

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.88  E-value=9.9e-22  Score=195.01  Aligned_cols=221  Identities=13%  Similarity=0.113  Sum_probs=161.2

Q ss_pred             CCCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhH-HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        77 ~~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..++++||||||+  |+||++++++|+++|++|++++|+..+. ....+++.+.            ...++.++.+|+.|
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~   84 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT------------YGIKAKAYKCQVDS   84 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH------------HCCCEECCBCCTTC
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh------------cCCceeEEecCCCC
Confidence            3567899999999  8999999999999999999999987554 4444433321            02579999999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCcc
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN  216 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~  216 (530)
                      .+++++++       +++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||....
T Consensus        85 ~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~  164 (267)
T 3gdg_A           85 YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH  164 (267)
T ss_dssp             HHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence            98887776       367999999996532      22234567999999999998887    45567899999997653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      ....    ......|+.+|++.+.+++.      ..++++.|+||+|.++...................+.+.+.+|+|+
T Consensus       165 ~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~  240 (267)
T 3gdg_A          165 IANF----PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKG  240 (267)
T ss_dssp             SCCS----SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHH
T ss_pred             ccCC----CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHh
Confidence            3211    12456799999999988763      2389999999999876543211111111112233345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++++.+. .+..|+++++.++.
T Consensus       241 ~~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          241 AYVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HhheeecCccccccCCEEEECCce
Confidence            999999764 33568999998875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.88  E-value=1.9e-21  Score=193.22  Aligned_cols=220  Identities=13%  Similarity=0.091  Sum_probs=162.0

Q ss_pred             CCCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           76 DSKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +.+++|++|||||+|  +||+++++.|+++|++|++++|+.+..+++.+.+++.            ...++.++.+|++|
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~   69 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL------------NQPEAHLYQIDVQS   69 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG------------TCSSCEEEECCTTC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------------CCCcEEEEEccCCC
Confidence            457899999999887  8999999999999999999999998888777665543            12578999999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCCcc----------CCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCC
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG  214 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~~~----------~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~  214 (530)
                      .+++.+++       +++|++|||||......          .++...+++|+.+...+.+++...  +.++||++||..
T Consensus        70 ~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~  149 (256)
T 4fs3_A           70 DEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLG  149 (256)
T ss_dssp             HHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence            98877665       57999999999642211          112344678888888888887654  346999999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v  285 (530)
                      ....      ......|+.+|++++.+.+       .+||+++.|.||+|.++.........  ..........+.+...
T Consensus       150 ~~~~------~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~p  223 (256)
T 4fs3_A          150 GEFA------VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQ  223 (256)
T ss_dssp             GTSC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCH
T ss_pred             cccC------cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCH
Confidence            6432      2335679999999987765       27999999999999876432111100  0001112233456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|||+++++|+.+. .+..|+++.|.++.
T Consensus       224 eevA~~v~fL~Sd~a~~iTG~~i~VDGG~  252 (256)
T 4fs3_A          224 VEVGKTAAYLLSDLSSGVTGENIHVDSGF  252 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhcCccCCEEEECcCH
Confidence            99999999999764 33578999888874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.88  E-value=4.2e-21  Score=191.40  Aligned_cols=217  Identities=12%  Similarity=0.046  Sum_probs=158.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++...+ +.+.+.             ..++.++.+|++|.++
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~-------------~~~~~~~~~Dv~~~~~   69 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQR-------------QPRATYLPVELQDDAQ   69 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHH-------------CTTCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhc-------------CCCEEEEEeecCCHHH
Confidence            46789999999999999999999999999999999998765433 233322             2678999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC-----ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCc
Q 009648          157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~-----~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++       +++|++|||||....     +..+|...+++|+.++.++.+++..+   +.++||++||......   
T Consensus        70 v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~---  146 (258)
T 4gkb_A           70 CRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG---  146 (258)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC---
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC---
Confidence            76665       579999999996432     22335667899999988888776532   2379999999865322   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-ccc-----eeecccCcccC-CCCCHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN-----ITLSQEDTLFG-GQVSNLQ  287 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-~~~-----~~~~~~~~~~~-g~V~v~D  287 (530)
                         ......|+.+|+++..+.+       ..||+++.|.||+|.++...... ...     ..........+ .+...+|
T Consensus       147 ---~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pee  223 (258)
T 4gkb_A          147 ---QGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE  223 (258)
T ss_dssp             ---CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHH
Confidence               2234679999999988776       27999999999999887532110 000     00000111222 4568999


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ||+++++|+.+. .+..|+++.|.++.
T Consensus       224 iA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          224 IADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHhCchhcCccCCeEEECCCc
Confidence            999999999765 34579999998885

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.87  E-value=1.1e-21  Score=197.07  Aligned_cols=214  Identities=14%  Similarity=0.109  Sum_probs=159.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++            +    .++..+.+|++|.+++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~------------g----~~~~~~~~Dv~~~~~v   90 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI------------G----GGAVGIQADSANLAEL   90 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTCEEEECCTTCHHHH
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------------C----CCeEEEEecCCCHHHH
Confidence            67899999999999999999999999999999999998777655432            1    5678899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++++       +++|++|||||....      +..+|...+++|+.++.++.+++...  +.++||++||......    
T Consensus        91 ~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~----  166 (273)
T 4fgs_A           91 DRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG----  166 (273)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC----
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC----
Confidence            7665       578999999996432      33346778999999999999998754  3358999999865332    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-ccc------eeecccCcccCCCCCHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THN------ITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-~~~------~~~~~~~~~~~g~V~v~DV  288 (530)
                        ......|+.+|+++..+.+.       .||+++.|.||+|.++...... ...      ..........+.+...+||
T Consensus       167 --~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peei  244 (273)
T 4fgs_A          167 --TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEV  244 (273)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHH
Confidence              22346799999999888763       7899999999999877422110 000      0000111233456789999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++++|+.+. .+..|+++.|.++.
T Consensus       245 A~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          245 AAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhCchhcCccCCeEeECcCh
Confidence            99999999765 34578999888774

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.87  E-value=5.9e-22  Score=192.65  Aligned_cols=190  Identities=14%  Similarity=0.089  Sum_probs=141.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+                ..++.++.+|+.|.++++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~v~~~   65 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------------SNNVGYRARDLASHQEVEQL   65 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------------SSCCCEEECCTTCHHHHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------------hhccCeEeecCCCHHHHHHH
Confidence            57999999999999999999999999999999988776654311                25788999999999999998


Q ss_pred             hCCC----cEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCccccccc
Q 009648          161 LGNA----SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILNL  227 (530)
Q Consensus       161 ~~~v----D~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~~  227 (530)
                      ++.+    |+||||||....      +..++...+++|+.++.++++++...   ...+||++||......      ...
T Consensus        66 ~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~------~~~  139 (230)
T 3guy_A           66 FEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP------KAQ  139 (230)
T ss_dssp             HHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC------CTT
T ss_pred             HHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC------CCC
Confidence            8654    999999996432      22234567899999999999987653   1239999999866432      234


Q ss_pred             hhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          228 FWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ...|+.+|++.+.+.+.       .|++++.|+||+|.++......        .......+++.+|+|+++++++.++.
T Consensus       140 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          140 ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG--------KSLDTSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEET
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC--------CCCCcccCCCHHHHHHHHHHHHhCcC
Confidence            56899999999988762       5899999999999876432110        11123456899999999999997554

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.87  E-value=9.8e-22  Score=194.27  Aligned_cols=212  Identities=16%  Similarity=0.087  Sum_probs=149.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH---
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI---  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl---  157 (530)
                      |+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+ +...         +    .++.++  |..+.+.+   
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---------~----~~~~~~--d~~~v~~~~~~   65 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---------Y----PQLKPM--SEQEPAELIEA   65 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---------C----TTSEEC--CCCSHHHHHHH
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---------C----CcEEEE--CHHHHHHHHHH
Confidence            689999999999999999999999999999999887766544 4322         1    234443  55554332   


Q ss_pred             -HHHhCCCcEEEEcccCC-CC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCccccc
Q 009648          158 -EPALGNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAIL  225 (530)
Q Consensus       158 -~~a~~~vD~VI~~Ag~~-~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~~~~  225 (530)
                       .+.++++|+||||||.. ..      +..++...+++|+.++.++++++.    +.+.++||++||......      .
T Consensus        66 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------~  139 (254)
T 1zmt_A           66 VTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP------W  139 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC------C
T ss_pred             HHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC------C
Confidence             22345899999999965 21      122345678999999999888874    456789999999866332      2


Q ss_pred             cchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceee--------cccCcccCCCCCHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL--------SQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~--------~~~~~~~~g~V~v~DVA~  290 (530)
                      .....|+.+|++.+.+.+.       .|+++++|+||+|+|+.........+..        .......+.+.+.+|+|+
T Consensus       140 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  219 (254)
T 1zmt_A          140 KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGE  219 (254)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHH
Confidence            2356799999999977652       5899999999999877543211100000        001112345689999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      ++++++.+.. ...|+++++.++..
T Consensus       220 ~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          220 LVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             HHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHhCcccCCccCCEEEECCCch
Confidence            9999998653 34688999988753

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.87  E-value=1.3e-21  Score=193.79  Aligned_cols=212  Identities=15%  Similarity=0.137  Sum_probs=148.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...             ..++.++.+|+.|.+++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v   69 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL-------------GGQCVPVVCDSSQESEV   69 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-------------SSEEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc-------------CCceEEEECCCCCHHHH
Confidence            45789999999999999999999999999999999988877766655433             14688999999999887


Q ss_pred             HHHh--------CCCcEEEEcccC--C-----------CCccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcC
Q 009648          158 EPAL--------GNASVVICCIGA--S-----------EKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS  212 (530)
Q Consensus       158 ~~a~--------~~vD~VI~~Ag~--~-----------~~~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS  212 (530)
                      ++++        +++|+||||||.  .           ..+..++...+++|+.++.++.+++.    +.+.++||++||
T Consensus        70 ~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  149 (260)
T 2qq5_A           70 RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISS  149 (260)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECC
T ss_pred             HHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcC
Confidence            6654        467999999952  1           11222244567888888877766654    556789999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-ccccee----ecccCcccC
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNIT----LSQEDTLFG  280 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~~~~~~----~~~~~~~~~  280 (530)
                      ......       .+...|+.+|++.+.+.+.       .|+++++|+||+|.++..... ......    ........+
T Consensus       150 ~~~~~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T 2qq5_A          150 PGSLQY-------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFS  222 (260)
T ss_dssp             GGGTSC-------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------C
T ss_pred             hhhcCC-------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhc
Confidence            876432       1246799999999988652       599999999999988753211 000000    000001111


Q ss_pred             CCCCHHHHHHHHHHHHhCCC--CCCCcEEEE
Q 009648          281 GQVSNLQVAELLACMAKNRS--LSYCKVVEV  309 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~--~~~g~vynv  309 (530)
                      .....+|+|+++++++.+..  +..|+++.+
T Consensus       223 ~~~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          223 SAETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             cCCCHHHHHHHHHHHhcCcccccccceeech
Confidence            23568999999999998764  224555543

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.87  E-value=1.1e-21  Score=192.36  Aligned_cols=208  Identities=13%  Similarity=0.052  Sum_probs=155.2

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC--CC
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EK  153 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d  153 (530)
                      ...++|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++...         +   ..++.++.+|+  .|
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~d~d~~~   77 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA---------G---QPQPLIIALNLENAT   77 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T---SCCCEEEECCTTTCC
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------C---CCCceEEEeccccCC
Confidence            3467889999999999999999999999999999999998888877766543         1   24677888887  88


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCc
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT  215 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v  215 (530)
                      .+++.+++       +++|+||||||....       +..++...+++|+.++.++++++.    +.+.++||++||...
T Consensus        78 ~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~  157 (247)
T 3i1j_A           78 AQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG  157 (247)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhh
Confidence            87776665       479999999996421       223345678999999999999884    456679999999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH--------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA--------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~--------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~D  287 (530)
                      ...      ......|+.+|++.+.+++.        .|++++.|+||+|.++......        ...........+|
T Consensus       158 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~p~d  223 (247)
T 3i1j_A          158 RKG------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY--------PDENPLNNPAPED  223 (247)
T ss_dssp             TSC------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS--------TTSCGGGSCCGGG
T ss_pred             cCC------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc--------cccCccCCCCHHH
Confidence            332      23456899999999987652        5799999999999875321100        0111123467899


Q ss_pred             HHHHHHHHHhCC-CCCCCcEEEE
Q 009648          288 VAELLACMAKNR-SLSYCKVVEV  309 (530)
Q Consensus       288 VA~ai~~ll~~~-~~~~g~vynv  309 (530)
                      +|+++++++.+. ....|+++++
T Consensus       224 va~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          224 IMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             GTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHHHHhCchhccccCeeecC
Confidence            999999999754 2345776654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.87  E-value=2.3e-21  Score=194.77  Aligned_cols=215  Identities=13%  Similarity=0.037  Sum_probs=156.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.   .             ..++.++.+|++|.+++
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~Dv~~~~~v   66 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---H-------------GGNAVGVVGDVRSLQDQ   66 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---T-------------BTTEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---c-------------CCcEEEEEcCCCCHHHH
Confidence            5678999999999999999999999999999999998877665432   1             25789999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCcc-----------CCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEKEV-----------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~-----------~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~  216 (530)
                      .+++       +++|+||||||......           .++...+++|+.++.++++++...   +.++||++||....
T Consensus        67 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (281)
T 3zv4_A           67 KRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGF  146 (281)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT
T ss_pred             HHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhc
Confidence            7666       47899999999642210           114456889999999998887542   23699999998663


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCccccccc----ce------eecccCcccC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH----NI------TLSQEDTLFG  280 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~----~~------~~~~~~~~~~  280 (530)
                      ..      ......|+.+|++.+.+.+.      .+++++.|+||+|.++........    .+      .........+
T Consensus       147 ~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  220 (281)
T 3zv4_A          147 YP------NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG  220 (281)
T ss_dssp             SS------SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS
T ss_pred             cC------CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC
Confidence            32      23356799999999988763      349999999999988743211000    00      0001122334


Q ss_pred             CCCCHHHHHHHHHHHHhC-C-CCCCCcEEEEeCCCC
Q 009648          281 GQVSNLQVAELLACMAKN-R-SLSYCKVVEVIAETT  314 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~-~-~~~~g~vynv~~~~~  314 (530)
                      .+.+.+|||+++++++.+ . .+..|+++++.++..
T Consensus       221 r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          221 RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             CCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence            567899999999999983 3 234799999988853

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.87  E-value=5.1e-22  Score=196.57  Aligned_cols=215  Identities=13%  Similarity=0.112  Sum_probs=155.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh---CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~---~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +.+|+||||||+|+||+++++.|++   +|++|++++|+.++.+.+.+++...           ....++.++.+|++|.
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~   72 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-----------QPDLKVVLAAADLGTE   72 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTSEEEEEECCTTSH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhh-----------CCCCeEEEEecCCCCH
Confidence            4578999999999999999999999   8999999999998877766655432           0124689999999999


Q ss_pred             hhHHHHhC---------CCc--EEEEcccCCCC---------ccCCCCcchHhHHHHHHHHHHHHHhc------CCCEEE
Q 009648          155 VQIEPALG---------NAS--VVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFI  208 (530)
Q Consensus       155 ~sl~~a~~---------~vD--~VI~~Ag~~~~---------~~~~~~~~~~vNv~gt~~Ll~aa~~~------gv~r~V  208 (530)
                      +++.++++         ++|  +||||||....         +..++...+++|+.++.++++++...      +.++||
T Consensus        73 ~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv  152 (259)
T 1oaa_A           73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV  152 (259)
T ss_dssp             HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred             HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence            88877652         468  99999996421         22335567999999999999998753      346899


Q ss_pred             EEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCccccc----ccce-eecccCcc
Q 009648          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----THNI-TLSQEDTL  278 (530)
Q Consensus       209 ~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~----~~~~-~~~~~~~~  278 (530)
                      ++||......      ......|+.+|++.+.+.+.     .+++++.|+||+|.++......    .... ........
T Consensus       153 ~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p  226 (259)
T 1oaa_A          153 NISSLCALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS  226 (259)
T ss_dssp             EECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred             EEcCchhcCC------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhh
Confidence            9999876432      23456799999999988763     3599999999999775321100    0000 00000111


Q ss_pred             cCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      .+.+.+.+|+|+++++++.+..+..|+++++
T Consensus       227 ~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v  257 (259)
T 1oaa_A          227 DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             cCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence            3456899999999999998655455666654

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.87  E-value=1.2e-21  Score=193.55  Aligned_cols=198  Identities=12%  Similarity=0.090  Sum_probs=150.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+|+||++|++.|+++|++|++++|+..+.                         .-..+.+|+.|.+++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------------------~~~~~~~d~~d~~~v   74 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------------------ADHSFTIKDSGEEEI   74 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------------SSEEEECSCSSHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------------------cccceEEEeCCHHHH
Confidence            4468999999999999999999999999999999987532                         124577999999888


Q ss_pred             HHHhC-------CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++++       ++|+||||||....       ...++...+++|+.++.++++++...  ..++||++||......   
T Consensus        75 ~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---  151 (251)
T 3orf_A           75 KSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR---  151 (251)
T ss_dssp             HHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC---
Confidence            77763       57999999996432       12234567899999999999999864  2258999999876432   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                         ......|+.+|++.+.+++.         .|+++++|+||+|.++.....        ........+++++|+|+++
T Consensus       152 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~dva~~i  220 (251)
T 3orf_A          152 ---TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------MSDANFDDWTPLSEVAEKL  220 (251)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------CTTSCGGGSBCHHHHHHHH
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------cccccccccCCHHHHHHHH
Confidence               23456799999999988762         479999999999987632111        1112234568999999999


Q ss_pred             HHHHhC-C-CCCCCcEEEEeCCCC
Q 009648          293 ACMAKN-R-SLSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~-~-~~~~g~vynv~~~~~  314 (530)
                      ++++.+ . ....|+++++.++..
T Consensus       221 ~~l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          221 FEWSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHHHCGGGCCCTTCEEEEEEETT
T ss_pred             HHHhcCccccCCcceEEEEecCCc
Confidence            999988 2 235689999988754

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.87  E-value=3.4e-21  Score=199.89  Aligned_cols=209  Identities=11%  Similarity=0.045  Sum_probs=153.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-------HHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      ...+|+||||||+|+||+++++.|+++|++|++++|+.++       +..+.+.+...             ..++.++.+
T Consensus        42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~-------------g~~~~~~~~  108 (346)
T 3kvo_A           42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV-------------GGKALPCIV  108 (346)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT-------------TCEEEEEEC
T ss_pred             CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc-------------CCeEEEEEc
Confidence            4678999999999999999999999999999999999864       33444443332             257899999


Q ss_pred             cCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcC
Q 009648          150 DLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS  212 (530)
Q Consensus       150 Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS  212 (530)
                      |++|.++++++++       ++|+||||||....      +..++...+++|+.++.++++++.    +.+.++||++||
T Consensus       109 Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS  188 (346)
T 3kvo_A          109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP  188 (346)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            9999998887764       89999999996432      222345679999999999999885    446679999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCc-ccCCCcccccccceeecccCcccCCCCCH
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~-V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v  285 (530)
                      ......    ........|+.+|++++.+++.      .|++++.|+||+ +..+...        ........+.+.++
T Consensus       189 ~~~~~~----~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~--------~~~~~~~~~r~~~p  256 (346)
T 3kvo_A          189 PLNLNP----VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD--------MLGGPGIESQCRKV  256 (346)
T ss_dssp             CCCCCG----GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHH--------HHCC--CGGGCBCT
T ss_pred             HHHcCC----CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHH--------hhccccccccCCCH
Confidence            865321    1123456899999998877652      589999999996 4432110        00111123345789


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIA  311 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~  311 (530)
                      +|||+++++++.+.....|+++ +.+
T Consensus       257 edvA~~v~~L~s~~~~itG~~i-vdg  281 (346)
T 3kvo_A          257 DIIADAAYSIFQKPKSFTGNFV-IDE  281 (346)
T ss_dssp             HHHHHHHHHHHTSCTTCCSCEE-EHH
T ss_pred             HHHHHHHHHHHhcCCCCCceEE-ECC
Confidence            9999999999988443456655 444

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=5.5e-22  Score=193.63  Aligned_cols=198  Identities=14%  Similarity=0.066  Sum_probs=148.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+|+||+++++.|+++|++|++++|+.++..                       ..+.++.+|+.|.+++.
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~~~   58 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQ   58 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------------cccEEEeCCCCCHHHHH
Confidence            3578999999999999999999999999999999875311                       23577889999998877


Q ss_pred             HHhC---------CCcEEEEcccCCCCc-------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          159 PALG---------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       159 ~a~~---------~vD~VI~~Ag~~~~~-------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++         ++|+||||||.....       ..++...+++|+.++.++++++...  +.++||++||......  
T Consensus        59 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--  136 (236)
T 1ooe_A           59 SILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP--  136 (236)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC--
Confidence            7663         799999999964321       1234567899999999999998864  2359999999866432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|++.+.+++.         .|+++++||||+|.++......        .......+++.+|+|++
T Consensus       137 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~dvA~~  204 (236)
T 1ooe_A          137 ----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM--------PNADHSSWTPLSFISEH  204 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS--------TTCCGGGCBCHHHHHHH
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC--------CCccccccCCHHHHHHH
Confidence                23456799999999988752         3599999999999886421110        00112245789999999


Q ss_pred             HHHHHhCC--CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR--SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~--~~~~g~vynv~~~~  313 (530)
                      ++++|..+  ....|+.+++.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            99777432  22458889888764

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.87  E-value=6.1e-22  Score=194.12  Aligned_cols=201  Identities=12%  Similarity=0.085  Sum_probs=150.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+|+||+++++.|+++|++|++++|+.++..                       ..+.++.+|+.|.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~   60 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQ   60 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------------CCcEEEEcCCCCHHH
Confidence            355789999999999999999999999999999999875311                       235778899999988


Q ss_pred             HHHHhC---------CCcEEEEcccCCCCc-------cCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCC
Q 009648          157 IEPALG---------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~~---------~vD~VI~~Ag~~~~~-------~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~  218 (530)
                      ++++++         ++|+||||||.....       ..++...+++|+.++.++++++...  +.++||++||......
T Consensus        61 v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  140 (241)
T 1dhr_A           61 ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG  140 (241)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC
Confidence            877663         799999999964321       1224566889999999999998764  2259999999866432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                            ......|+.+|++.+.+++.         .|+++++|+||+|.++.......        ......+++.+|+|
T Consensus       141 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~~~~vA  206 (241)
T 1dhr_A          141 ------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP--------EADFSSWTPLEFLV  206 (241)
T ss_dssp             ------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST--------TSCGGGSEEHHHHH
T ss_pred             ------CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCc--------chhhccCCCHHHHH
Confidence                  23456799999999988762         46999999999997763211000        01122357889999


Q ss_pred             HHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          290 ELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      +++++++.+.. ...|+.+++.++..
T Consensus       207 ~~v~~l~~~~~~~~~G~~~~v~g~~~  232 (241)
T 1dhr_A          207 ETFHDWITGNKRPNSGSLIQVVTTDG  232 (241)
T ss_dssp             HHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred             HHHHHHhcCCCcCccceEEEEeCCCC
Confidence            99999997653 24588888887653

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.87  E-value=2.1e-21  Score=192.03  Aligned_cols=217  Identities=13%  Similarity=0.072  Sum_probs=160.1

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.++|++|||||+++||+++++.|+++|++|++++|+..+  +..+.+++.         |    .++.++.+|+.|.+
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~~---------g----~~~~~~~~Dv~d~~   69 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKD---------G----GNASALLIDFADPL   69 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT---------T----CCEEEEECCTTSTT
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHh---------C----CcEEEEEccCCCHH
Confidence            35789999999999999999999999999999999998642  223333332         2    67899999999998


Q ss_pred             hHHHHh--CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC-CCEEEEEcCCCccCCCCcc
Q 009648          156 QIEPAL--GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       156 sl~~a~--~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g-v~r~V~iSS~~v~~~~~~~  222 (530)
                      +++.++  .++|++|||||....      +..+|...+++|+.++..+.+++.    +++ .++||++||......    
T Consensus        70 ~v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g----  145 (247)
T 4hp8_A           70 AAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG----  145 (247)
T ss_dssp             TTTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC----
Confidence            888777  468999999996432      333467789999999988888754    333 579999999866332    


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|+.+..+.+       .+||+++.|.||+|.++.........  ..........+.+...+|||.+++
T Consensus       146 --~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~  223 (247)
T 4hp8_A          146 --GIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAV  223 (247)
T ss_dssp             --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHH
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence              1234579999999988776       27999999999999887432111000  000112233445678999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|+.+. .+..|+++.|.++.
T Consensus       224 fLaSd~a~~iTG~~i~VDGG~  244 (247)
T 4hp8_A          224 FLSSAAADYVHGAILNVDGGW  244 (247)
T ss_dssp             HHTSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhcCCcCCeEEECccc
Confidence            999765 34578999888874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.86  E-value=7.6e-22  Score=191.17  Aligned_cols=198  Identities=13%  Similarity=0.104  Sum_probs=148.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+++++.|+++|++|++++|+.+                                 +|++|.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------------~D~~~~~~   49 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------------LDISDEKS   49 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------------CCTTCHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------------cCCCCHHH
Confidence            356789999999999999999999999999999998651                                 89999998


Q ss_pred             HHHHh---CCCcEEEEcccCCC-C------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcccc
Q 009648          157 IEPAL---GNASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       157 l~~a~---~~vD~VI~~Ag~~~-~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +++++   +++|+||||||... .      +..++...+++|+.++.++++++...  ..++||++||......      
T Consensus        50 v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------  123 (223)
T 3uce_A           50 VYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV------  123 (223)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC------
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC------
Confidence            88777   47899999999652 1      22234566899999999999999865  2358999999866332      


Q ss_pred             ccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccc----eeecccCcccCCCCCHHHHHHHHHHH
Q 009648          225 LNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN----ITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~----~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                      ......|+.+|++.+.+.+.     ..++++.|+||+|.++.........    ..........+.+.+++|+|++++++
T Consensus       124 ~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l  203 (223)
T 3uce_A          124 VANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFA  203 (223)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHH
Confidence            23456899999999987753     2399999999999987432111000    00011122334568999999999999


Q ss_pred             HhCCCCCCCcEEEEeCCCC
Q 009648          296 AKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       296 l~~~~~~~g~vynv~~~~~  314 (530)
                      +.+.. ..|++|++.++..
T Consensus       204 ~~~~~-~tG~~i~vdgG~~  221 (223)
T 3uce_A          204 IQNSY-MTGTVIDVDGGAL  221 (223)
T ss_dssp             HHCTT-CCSCEEEESTTGG
T ss_pred             ccCCC-CCCcEEEecCCee
Confidence            98654 5799999988753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.86  E-value=1.3e-21  Score=192.05  Aligned_cols=202  Identities=17%  Similarity=0.134  Sum_probs=134.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+|+||+++++.|++ |++|++++|+.++...+.+                  ..++.++.+|+.|.+..
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~   63 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------------------IEGVEPIESDIVKEVLE   63 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------------------STTEEEEECCHHHHHHT
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------------------hcCCcceecccchHHHH
Confidence            4578999999999999999999987 9999999999877665431                  25689999999886431


Q ss_pred             ---HHH---hCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          158 ---EPA---LGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ---~~a---~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                         .+.   ++++|+||||||....      +..++...+++|+.++.++++++.    +.+ ++||++||..+...   
T Consensus        64 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~---  139 (245)
T 3e9n_A           64 EGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP---  139 (245)
T ss_dssp             SSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC---
Confidence               122   2478999999996532      222345678999999888877764    334 79999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|++.+.+++.       .|+++++|+||+|.++........    .........+++++|+|+++++
T Consensus       140 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~p~dvA~~i~~  212 (245)
T 3e9n_A          140 ---HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS----QGTNFRPEIYIEPKEIANAIRF  212 (245)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh----hhcccccccCCCHHHHHHHHHH
Confidence               23456799999999988762       689999999999998743211100    0011112346899999999999


Q ss_pred             HHhCCCCCCCcEEEEeC
Q 009648          295 MAKNRSLSYCKVVEVIA  311 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~  311 (530)
                      +++++.  .+.+||+.=
T Consensus       213 l~~~~~--~~~~~~i~~  227 (245)
T 3e9n_A          213 VIDAGE--TTQITNVDV  227 (245)
T ss_dssp             HHTSCT--TEEEEEEEE
T ss_pred             HHcCCC--ccceeeeEE
Confidence            998876  477787754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.86  E-value=3.2e-21  Score=193.76  Aligned_cols=197  Identities=15%  Similarity=0.133  Sum_probs=148.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+.+.         +   ..++.++.+|++|.+++
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~Dl~d~~~v   93 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL---------G---AASAHYIAGTMEDMTFA   93 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------T---CSEEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---------C---CCceEEEeCCCCCHHHH
Confidence            45789999999999999999999999999999999998877766655433         1   13689999999999887


Q ss_pred             HHHhC-------CCcEEEEc-ccCCCCc-----cCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCCc
Q 009648          158 EPALG-------NASVVICC-IGASEKE-----VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       158 ~~a~~-------~vD~VI~~-Ag~~~~~-----~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~~  221 (530)
                      .++++       ++|+|||| ||.....     ..++...+++|+.++.++++++...   +.++||++||......   
T Consensus        94 ~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---  170 (286)
T 1xu9_A           94 EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA---  170 (286)
T ss_dssp             HHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC---
T ss_pred             HHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC---
Confidence            77664       79999999 5643221     1223456899999999998887542   3479999999865322   


Q ss_pred             cccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                         ......|+.+|++.+.+++         ..|+++++|+||+|.++......        ........++++|+|+.+
T Consensus       171 ---~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~vA~~i  239 (286)
T 1xu9_A          171 ---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV--------SGIVHMQAAPKEECALEI  239 (286)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS--------CGGGGGGCBCHHHHHHHH
T ss_pred             ---CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc--------cccccCCCCCHHHHHHHH
Confidence               2345679999999887654         24899999999999876321100        001112458999999999


Q ss_pred             HHHHhCCC
Q 009648          293 ACMAKNRS  300 (530)
Q Consensus       293 ~~ll~~~~  300 (530)
                      +.++..+.
T Consensus       240 ~~~~~~~~  247 (286)
T 1xu9_A          240 IKGGALRQ  247 (286)
T ss_dssp             HHHHHTTC
T ss_pred             HHHHhcCC
Confidence            99998764

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.86  E-value=5e-21  Score=192.87  Aligned_cols=208  Identities=13%  Similarity=0.080  Sum_probs=150.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-h
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~  155 (530)
                      +..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++.+.            ...++.++.+|+.|. +
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~~~   76 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS------------NHENVVFHQLDVTDPIA   76 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------TCCSEEEEECCTTSCHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------------CCCceEEEEccCCCcHH
Confidence            456789999999999999999999999999999999998887776665432            125799999999997 7


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------------------------------------ccCCCCcchHhHHHHH
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------------------------------------EVFDITGPYRIDFQAT  192 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------------------------------------~~~~~~~~~~vNv~gt  192 (530)
                      ++..++       +++|+||||||....                                    ...++...+++|+.|+
T Consensus        77 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~  156 (311)
T 3o26_A           77 TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGV  156 (311)
T ss_dssp             HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehH
Confidence            666555       489999999997532                                    1112344589999998


Q ss_pred             HHHHHHHH----hcCCCEEEEEcCCCccCCCCc-------------------------------------cccccchhHH
Q 009648          193 KNLVDAAT----IAKVNHFIMVSSLGTNKFGFP-------------------------------------AAILNLFWGV  231 (530)
Q Consensus       193 ~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~-------------------------------------~~~~~~~~~Y  231 (530)
                      .+|++++.    +.+.++||++||.........                                     .........|
T Consensus       157 ~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  236 (311)
T 3o26_A          157 KSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY  236 (311)
T ss_dssp             HHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHH
T ss_pred             HHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhh
Confidence            88888875    346679999999765321100                                     0001234679


Q ss_pred             HHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcE
Q 009648          232 LLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV  306 (530)
Q Consensus       232 ~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~v  306 (530)
                      +.+|++.+.+++.     .+++++.|+||+|.++....               .+....++.|+.+++++..+....++.
T Consensus       237 ~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~g~  301 (311)
T 3o26_A          237 TTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG---------------IGNYTAEEGAEHVVRIALFPDDGPSGF  301 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT---------------CCSBCHHHHHHHHHHHHTCCSSCCCSC
T ss_pred             HHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC---------------CCCCCHHHHHHHHHHHHhCCCCCCCce
Confidence            9999999988763     47999999999998753211               123679999999999988665334444


Q ss_pred             EEEeC
Q 009648          307 VEVIA  311 (530)
Q Consensus       307 ynv~~  311 (530)
                      |...+
T Consensus       302 ~~~~s  306 (311)
T 3o26_A          302 FYDCS  306 (311)
T ss_dssp             EETC-
T ss_pred             Eeccc
Confidence            44333

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.86  E-value=1.5e-20  Score=188.17  Aligned_cols=205  Identities=11%  Similarity=0.065  Sum_probs=148.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-------HHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|+.++       ++.+.+.+...             ..++.++.+
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~   69 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA-------------GGQGLALKC   69 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH-------------TSEEEEEEC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc-------------CCeEEEEeC
Confidence            3567899999999999999999999999999999998764       34444333322             257899999


Q ss_pred             cCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcC
Q 009648          150 DLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSS  212 (530)
Q Consensus       150 Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS  212 (530)
                      |+.|.+++.+++       +++|+||||||....      +..++...+++|+.++.++++++..    .+.++||++||
T Consensus        70 Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS  149 (274)
T 3e03_A           70 DIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP  149 (274)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence            999998887766       379999999996432      2223456788999999999888753    46679999999


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCc-ccCCCcccccccceeecccCcccCCCCC
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~-V~Gp~~~~~~~~~~~~~~~~~~~~g~V~  284 (530)
                      .......    .......|+.+|++.+.+.+.       .|++++.|+||+ +..+.....         .........+
T Consensus       150 ~~~~~~~----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~---------~~~~~~~~~~  216 (274)
T 3e03_A          150 PPSLNPA----WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML---------PGVDAAACRR  216 (274)
T ss_dssp             CCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCCGGGSBC
T ss_pred             hHhcCCC----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc---------ccccccccCC
Confidence            8653210    022346799999999987752       689999999995 544322110         0111123578


Q ss_pred             HHHHHHHHHHHHhCCC-CCCCcEE
Q 009648          285 NLQVAELLACMAKNRS-LSYCKVV  307 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~-~~~g~vy  307 (530)
                      .+|+|+++++++.+.. ...|+++
T Consensus       217 pedvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          217 PEIMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             THHHHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHHHHHHhCccccccCCeEE
Confidence            9999999999998754 2346665

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.85  E-value=8.6e-21  Score=189.43  Aligned_cols=210  Identities=18%  Similarity=0.130  Sum_probs=152.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..++|++|||||+++||+++++.|+++|++|++++|+..+.                       .....++++|++|.+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------------~~~~~~~~~Dv~~~~   63 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------------------LPEELFVEADLTTKE   63 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------------SCTTTEEECCTTSHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------------------CCcEEEEEcCCCCHH
Confidence            356789999999999999999999999999999999976421                       123347889999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~  216 (530)
                      +++.++       +++|++|||||....        +..+|...+++|+.++.++.+++.    +++.++||++||....
T Consensus        64 ~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~  143 (261)
T 4h15_A           64 GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRV  143 (261)
T ss_dssp             HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhc
Confidence            876655       578999999995321        223456779999999888777654    5577899999998653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-----c--------cce-eeccc
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----T--------HNI-TLSQE  275 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-----~--------~~~-~~~~~  275 (530)
                      ...     ......|+.+|++++.+.+       ..||+++.|.||+|.++......     .        ... .....
T Consensus       144 ~~~-----~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (261)
T 4h15_A          144 LPL-----PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLG  218 (261)
T ss_dssp             SCC-----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTT
T ss_pred             cCC-----CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhc
Confidence            321     1124569999999987765       27999999999999876321100     0        000 00111


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          276 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       276 ~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ....+.+...+|||+++++|+.+.. +..|+++.|.++.
T Consensus       219 ~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          219 GIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            2234456789999999999997643 3578999998875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.84  E-value=1.1e-20  Score=188.19  Aligned_cols=213  Identities=11%  Similarity=0.073  Sum_probs=153.6

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCchhH-HHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +++|+||||||  +|+||+++++.|+++|++|++++|+.++. +.+.+   +             ...++.++.+|++|.
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~~Dv~~~   68 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---R-------------LPAKAPLLELDVQNE   68 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---T-------------SSSCCCEEECCTTCH
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---h-------------cCCCceEEEccCCCH
Confidence            45789999999  99999999999999999999999987652 33221   0             024678899999999


Q ss_pred             hhHHHHhC----------CCcEEEEcccCCCC-----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEc
Q 009648          155 VQIEPALG----------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVS  211 (530)
Q Consensus       155 ~sl~~a~~----------~vD~VI~~Ag~~~~-----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iS  211 (530)
                      ++++++++          ++|+||||||....           +..++...+++|+.++.++++++...  ..++||++|
T Consensus        69 ~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence            88877764          89999999996531           11224556889999999999999754  225999999


Q ss_pred             CCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc----ccc-------e-ee
Q 009648          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----THN-------I-TL  272 (530)
Q Consensus       212 S~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~----~~~-------~-~~  272 (530)
                      |.+.  .+     ...+..|+.+|++.+.+.+.       .|+++++|+||+|.++......    ...       . ..
T Consensus       149 s~~~--~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  221 (269)
T 2h7i_A          149 FDPS--RA-----MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG  221 (269)
T ss_dssp             CCCS--SC-----CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred             Cccc--cc-----cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHh
Confidence            9765  22     22356799999999877652       5999999999999876311000    000       0 00


Q ss_pred             cccCcccC-CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          273 SQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       273 ~~~~~~~~-g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .......+ .+...+|||+++++++.+.. +..|+++.+.++.
T Consensus       222 ~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          222 WDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             HHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             hhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            00111223 35788999999999998643 3468888888774

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.84  E-value=4.4e-21  Score=188.44  Aligned_cols=209  Identities=13%  Similarity=0.027  Sum_probs=144.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEE-E--CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-V--RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~-~--R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +|+||||||+|+||+++++.|+++|++|+++ +  |+.++.+.+.+++                 .+.++.  |..+.+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-----------------~~~~~~--~~~~v~~   61 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-----------------PGTIAL--AEQKPER   61 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-----------------TTEEEC--CCCCGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-----------------CCCccc--CHHHHHH
Confidence            3689999999999999999999999999999 6  9987766554321                 112222  4444333


Q ss_pred             HH-H---HhCCCcEEEEcccCCCC---c------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IE-P---ALGNASVVICCIGASEK---E------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~-~---a~~~vD~VI~~Ag~~~~---~------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +. +   .++++|+||||||....   .      ..++...+++|+.++.++++++.    +.+.++||++||...... 
T Consensus        62 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-  140 (244)
T 1zmo_A           62 LVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP-  140 (244)
T ss_dssp             HHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC-
Confidence            22 2   23578999999996533   1      12245678999999999888775    456789999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCc---ccccccce-eeccc-CcccCCCCCHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTD---AYKETHNI-TLSQE-DTLFGGQVSNLQ  287 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~---~~~~~~~~-~~~~~-~~~~~g~V~v~D  287 (530)
                           ......|+.+|++.+.+.+.       .|+++++|+||+|.++..   ........ ..... ....+.+.+.+|
T Consensus       141 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~  215 (244)
T 1zmo_A          141 -----LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDE  215 (244)
T ss_dssp             -----CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHH
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHH
Confidence                 22345799999999987652       589999999999988753   11100000 00000 112345678999


Q ss_pred             HHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          288 VAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       288 VA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +|+++++++.+.. ...|+++.+.++.
T Consensus       216 vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          216 MGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHcCccccCccCCEEEeCCCC
Confidence            9999999998653 3458888887763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.83  E-value=8.7e-21  Score=195.07  Aligned_cols=208  Identities=12%  Similarity=0.079  Sum_probs=144.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++||||||+|+||+++++.|+++|++|++++|+..+...+.+.++...-       ......++.++.+|++|.+++.+
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~d~~~v~~   74 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARA-------LACPPGSLETLQLDVRDSKSVAA   74 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHH-------TTCCTTSEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhh-------ccCCCCceEEEEecCCCHHHHHH
Confidence            57899999999999999999999999999998876544433332222100       00112578999999999999998


Q ss_pred             HhCC-----CcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcccc
Q 009648          160 ALGN-----ASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       160 a~~~-----vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +++.     +|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++||......      
T Consensus        75 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~------  148 (327)
T 1jtv_A           75 ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG------  148 (327)
T ss_dssp             HHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC------
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC------
Confidence            8864     8999999996432      22234567999999999999885    4557789999999866332      


Q ss_pred             ccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeec----------cc-----CcccCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLS----------QE-----DTLFGG  281 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~----------~~-----~~~~~g  281 (530)
                      ......|+.+|++++.+.+.       .|+++++|+||+|.++......... ..+.          ..     ....+.
T Consensus       149 ~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (327)
T 1jtv_A          149 LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE  228 (327)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhh
Confidence            12345799999999987652       6999999999999887432110000 0000          00     000111


Q ss_pred             -CCCHHHHHHHHHHHHhCCC
Q 009648          282 -QVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       282 -~V~v~DVA~ai~~ll~~~~  300 (530)
                       .++.+|||+++++++..+.
T Consensus       229 ~~~~pedvA~~i~~l~~~~~  248 (327)
T 1jtv_A          229 AAQNPEEVAEVFLTALRAPK  248 (327)
T ss_dssp             HCBCHHHHHHHHHHHHHCSS
T ss_pred             cCCCHHHHHHHHHHHHcCCC
Confidence             2589999999999998754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.83  E-value=8.8e-20  Score=195.86  Aligned_cols=214  Identities=14%  Similarity=0.080  Sum_probs=152.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++++|||||+|+||+++++.|+++|++|++++|+... +.+.+...+               .+++++.+|++|.+++
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~---------------~~~~~~~~Dvtd~~~v  274 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK---------------VGGTALTLDVTADDAV  274 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH---------------HTCEEEECCTTSTTHH
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEecCCHHHH
Confidence            467899999999999999999999999999999997532 222222222               2457899999999888


Q ss_pred             HHHhC-------C-CcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc----CCCEEEEEcCCCccCCC
Q 009648          158 EPALG-------N-ASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~~-------~-vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~----gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       + +|+||||||....      +..++...+++|+.++.+|.+++...    +.++||++||...... 
T Consensus       275 ~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g-  353 (454)
T 3u0b_A          275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAG-  353 (454)
T ss_dssp             HHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHC-
T ss_pred             HHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCC-
Confidence            77663       4 9999999996532      22334567999999999999999875    6679999999755322 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|...+.+++       ..|+++++|+||+|.++.........................+|||+++
T Consensus       354 -----~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v  428 (454)
T 3u0b_A          354 -----NRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELI  428 (454)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHH
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHH
Confidence                 1235679999998877664       2699999999999988743221110000001111223346899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++.+. .+..|+++++.++.
T Consensus       429 ~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          429 AYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHHHCGGGTTCCSCEEEESSSB
T ss_pred             HHHhCCccCCCCCcEEEECCcc
Confidence            9999754 33578999998874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.82  E-value=5.5e-20  Score=188.58  Aligned_cols=203  Identities=15%  Similarity=0.088  Sum_probs=146.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEE---------CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV---------RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~---------R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      +.+|+||||||+|+||+++++.|+++|++|++++         |+.++.+.+.+++...         +    .   .+.
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---------~----~---~~~   70 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---------G----G---KAV   70 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---------T----C---EEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh---------C----C---eEE
Confidence            5678999999999999999999999999999975         4566666655544432         1    1   134


Q ss_pred             ecCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEc
Q 009648          149 CDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVS  211 (530)
Q Consensus       149 ~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iS  211 (530)
                      +|+.|.+++.+++       +++|+||||||....      +..++...+++|+.++.+|++++    ++.+.++||++|
T Consensus        71 ~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vs  150 (319)
T 1gz6_A           71 ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA  150 (319)
T ss_dssp             EECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            8999987665553       579999999996532      22234567899999998888886    445678999999


Q ss_pred             CCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCC
Q 009648          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       212 S~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~  284 (530)
                      |......      ......|+.+|++.+.+.+.       .|+++++|+||++ ++....     . ..   ......++
T Consensus       151 S~~~~~~------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~-----~-~~---~~~~~~~~  214 (319)
T 1gz6_A          151 SASGIYG------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET-----V-MP---EDLVEALK  214 (319)
T ss_dssp             CHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG-----G-SC---HHHHHHSC
T ss_pred             ChhhccC------CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc-----c-CC---hhhhccCC
Confidence            9744221      12356799999999877652       5899999999987 432110     0 00   00112468


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      .+|+|+++++++.+.....|++|++.++
T Consensus       215 p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          215 PEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            8999999999998765456888888765

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.81  E-value=2.7e-19  Score=193.58  Aligned_cols=200  Identities=20%  Similarity=0.186  Sum_probs=146.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCch---hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~---k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++||||||+|+||+++++.|+++|++ |++++|+..   ....+.+++...         |    .++.++.+|+.|
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---------g----~~v~~~~~Dv~d  290 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---------G----ARTTVAACDVTD  290 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---------C----CEEEEEEeCCCC
Confidence            45789999999999999999999999985 999999875   344444444332         2    578999999999


Q ss_pred             HhhHHHHhCCC------cEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc
Q 009648          154 RVQIEPALGNA------SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       154 ~~sl~~a~~~v------D~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .+++.++++.+      |+||||||....      +..++...+++|+.|+.+|++++...+.++||++||..... +. 
T Consensus       291 ~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~-g~-  368 (486)
T 2fr1_A          291 RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF-GA-  368 (486)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT-CC-
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcC-CC-
Confidence            99999888654      999999996532      12234456889999999999999988889999999975422 11 


Q ss_pred             cccccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                          .....|+.+|...+.+.+   ..|+++++|++|.+++.+...... .-.+.   ......++.+|+++++..++..
T Consensus       369 ----~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~-~~~~~---~~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          369 ----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPV-ADRFR---RHGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             ----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CT---TTTEECBCHHHHHHHHHHHHHT
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhH-HHHHH---hcCCCCCCHHHHHHHHHHHHhC
Confidence                123569999999887654   579999999999998763211100 00000   0111358999999999999987


Q ss_pred             CC
Q 009648          299 RS  300 (530)
Q Consensus       299 ~~  300 (530)
                      +.
T Consensus       441 ~~  442 (486)
T 2fr1_A          441 AE  442 (486)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.78  E-value=1.4e-18  Score=188.98  Aligned_cols=200  Identities=16%  Similarity=0.104  Sum_probs=148.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++||||||+|+||+++++.|+++|+ +|++++|+...   ...+.+++...             ..+++++.+|+.|
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-------------g~~v~~~~~Dvtd  323 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-------------GCEVVHAACDVAE  323 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-------------TCEEEEEECCSSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-------------CCEEEEEEeCCCC
Confidence            4568999999999999999999999998 69999998743   34444433322             2578999999999


Q ss_pred             HhhHHHHhCC--CcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCCcccc
Q 009648          154 RVQIEPALGN--ASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       154 ~~sl~~a~~~--vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~~~~~  224 (530)
                      .+++.+++++  +|+||||||.....      ..++...+++|+.++.+|.+++... +.++||++||..... +.    
T Consensus       324 ~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~-g~----  398 (511)
T 2z5l_A          324 RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTW-GN----  398 (511)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTT-CC----
T ss_pred             HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcC-CC----
Confidence            9999999864  99999999965432      1223456889999999999998876 788999999985432 21    


Q ss_pred             ccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                       .....|+.+|...+.+++   ..|+++++|+||.+.+.+-..... ...+.   ......++.+|+++++..++.++.
T Consensus       399 -~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~-~~~~~---~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          399 -AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAG-EESLS---RRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             -TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHH-HHHHH---HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccccc-HHHHH---hcCCCCCCHHHHHHHHHHHHhCCC
Confidence             234679999999998775   479999999999884321100000 00000   111246899999999999998765

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.76  E-value=2.6e-18  Score=190.95  Aligned_cols=204  Identities=15%  Similarity=0.102  Sum_probs=142.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC---------CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR---------SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R---------~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v  147 (530)
                      .+++|+||||||+|+||+++++.|+++|++|++++|         +..+.+.+.+++...         +    ..   +
T Consensus        16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---------~----~~---~   79 (613)
T 3oml_A           16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---------G----GE---A   79 (613)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---------T----CC---E
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---------C----Ce---E
Confidence            467889999999999999999999999999999988         555666665555432         1    12   2


Q ss_pred             EecCCCHhhHHHHhC-------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEE
Q 009648          148 ECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMV  210 (530)
Q Consensus       148 ~~Dl~d~~sl~~a~~-------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~i  210 (530)
                      .+|+.|.+++.++++       ++|+||||||....      +..++...+++|+.++.++++++    ++.+.++||++
T Consensus        80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~i  159 (613)
T 3oml_A           80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMT  159 (613)
T ss_dssp             EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence            479999888777764       58999999996532      22335667999999999998887    45666799999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCC
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V  283 (530)
                      ||......      ......|+.+|++.+.+.+.       .|++++.|+||++-.-...      ..    .......+
T Consensus       160 sS~a~~~~------~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~------~~----~~~~~~~~  223 (613)
T 3oml_A          160 SSNSGIYG------NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG------IL----PDILFNEL  223 (613)
T ss_dssp             CCHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC------CC----CHHHHTTC
T ss_pred             CCHHHcCC------CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh------cc----chhhhhcC
Confidence            99754322      12356799999999877652       6899999999975211110      00    00112346


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      ..+|||.++++++.+.....|++|++.++
T Consensus       224 ~pedvA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          224 KPKLIAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             CGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             CHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence            88999999999998765557888888765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.75  E-value=6.5e-18  Score=183.00  Aligned_cols=200  Identities=18%  Similarity=0.171  Sum_probs=147.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCch---hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~---k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++++||||||+|+||+++++.|+++|+ +|+++.|+..   ....+.+++...         |    .++.++.+|+.|.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---------g----~~v~~~~~Dvtd~  304 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---------G----VRVTIAACDAADR  304 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTTCH
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---------C----CeEEEEEccCCCH
Confidence            348999999999999999999999998 8888999743   344554444433         2    5799999999999


Q ss_pred             hhHHHHhC------CCcEEEEcccCC-CCc------cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc
Q 009648          155 VQIEPALG------NASVVICCIGAS-EKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       155 ~sl~~a~~------~vD~VI~~Ag~~-~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +++.++++      .+|+||||||.. ...      ..++...+++|+.++.+|.+++...+.++||++||......   
T Consensus       305 ~~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g---  381 (496)
T 3mje_A          305 EALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWG---  381 (496)
T ss_dssp             HHHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTT---
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCC---
Confidence            99998884      479999999975 221      12235668999999999999999988899999999754322   


Q ss_pred             cccccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                         ......|+.+|...+.+.+   ..|++++.|+||.+.+.+........-.+...+   ...+..+++++++..++..
T Consensus       382 ---~~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g---~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          382 ---SGGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQG---VLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTT---EEEECHHHHHHHHHHHHHH
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcC---CCCCCHHHHHHHHHHHHcC
Confidence               1234679999999887765   489999999999887654221100000000000   1237899999999999987


Q ss_pred             CC
Q 009648          299 RS  300 (530)
Q Consensus       299 ~~  300 (530)
                      +.
T Consensus       456 ~~  457 (496)
T 3mje_A          456 DD  457 (496)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.75  E-value=2.9e-18  Score=172.98  Aligned_cols=228  Identities=12%  Similarity=0.092  Sum_probs=142.6

Q ss_pred             CCCCEEEEECCC--cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhcc-ccccCCCCCCCeEEEEecC---
Q 009648           78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGE-LANKGIQPVEMLELVECDL---  151 (530)
Q Consensus        78 ~~~k~VLVTGAt--G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~-~~~~g~~~~~~v~~v~~Dl---  151 (530)
                      +.+|+||||||+  |+||+++++.|+++|++|++++|+...... .......+++.. ....+ ........+.+|+   
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIF-ETSLRRGKFDQSRVLPDG-SLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHH-HHHHHTTTTTGGGBCTTS-SBCCEEEEEEECTTCC
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhh-hhhhhhhHhhhhhhhccc-cccccccccccceecc
Confidence            457899999999  999999999999999999999986421100 000000000000 00000 0001134444442   


Q ss_pred             -----C----C--------HhhHHHHh-------CCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHH
Q 009648          152 -----E----K--------RVQIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAA  199 (530)
Q Consensus       152 -----~----d--------~~sl~~a~-------~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa  199 (530)
                           .    |        .+++++++       +++|+||||||...        .+..++...+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                 2    1        33444433       57999999998532        122234567899999999999999


Q ss_pred             Hhc--CCCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCcccccc-
Q 009648          200 TIA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET-  267 (530)
Q Consensus       200 ~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~~~~~~-  267 (530)
                      ...  ..++||++||......      .... ..|+.+|++.+.+.+        ..|+++++|+||+|.++....... 
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~  237 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERI------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSC------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHhccCceEEEEeccccccC------CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcccc
Confidence            864  2269999999765322      1122 369999999887754        159999999999999885322100 


Q ss_pred             cce-eecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          268 HNI-TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       268 ~~~-~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ... .........+.+.+++|+|+++++++.+. .+..|+++++.++.
T Consensus       238 ~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            000 00001112234578999999999998753 33468899998874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.73  E-value=2.6e-17  Score=179.62  Aligned_cols=200  Identities=15%  Similarity=0.037  Sum_probs=146.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEE-ECCc-------------hhHHHHHHHHHHhhhhccccccCCCCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAG-VRSV-------------QRAENLVQSVKQMKLDGELANKGIQPVE  142 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~-~R~~-------------~k~~~l~~~~~~~~l~~~~~~~g~~~~~  142 (530)
                      ..+++||||||+|+||.++++.|+++|++ |+++ .|+.             ++.+.+.++++..         |    .
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------g----~  315 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL---------G----A  315 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH---------T----C
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc---------C----C
Confidence            45789999999999999999999999987 5555 7874             3444555544433         2    5


Q ss_pred             CeEEEEecCCCHhhHHHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcC-----CC
Q 009648          143 MLELVECDLEKRVQIEPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK-----VN  205 (530)
Q Consensus       143 ~v~~v~~Dl~d~~sl~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~g-----v~  205 (530)
                      ++.++.+|++|.+++.++++      .+|+||||||....      +..++...+++|+.|+.+|.+++....     .+
T Consensus       316 ~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~  395 (525)
T 3qp9_A          316 TATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP  395 (525)
T ss_dssp             EEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence            79999999999999988885      46999999996533      222345678999999999999998765     78


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH---CCCCEEEEEcCcccCCCcccccccceeecccCcccCCC
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ  282 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~---~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~  282 (530)
                      +||++||......      ......|+.+|...+.+.++   .|++++.|+||.+.+..... ......+.   ......
T Consensus       396 ~iV~~SS~a~~~g------~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~~~-~~~~~~~~---~~g~~~  465 (525)
T 3qp9_A          396 VLVLFSSVAAIWG------GAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRVTE-GATGERLR---RLGLRP  465 (525)
T ss_dssp             EEEEEEEGGGTTC------CTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGGGS-SHHHHHHH---HTTBCC
T ss_pred             EEEEECCHHHcCC------CCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccccc-hhhHHHHH---hcCCCC
Confidence            9999999865332      12346799999999988764   68999999999994332100 00000000   111135


Q ss_pred             CCHHHHHHHHHHHHhCCC
Q 009648          283 VSNLQVAELLACMAKNRS  300 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~  300 (530)
                      ++.+++++++..++.++.
T Consensus       466 l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          466 LAPATALTALDTALGHGD  483 (525)
T ss_dssp             BCHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHhCCC
Confidence            899999999999998765

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.73  E-value=1.2e-17  Score=170.55  Aligned_cols=221  Identities=12%  Similarity=0.087  Sum_probs=124.8

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCc-----------hhHHHH-----------HHHHHHhhhhccc
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV-----------QRAENL-----------VQSVKQMKLDGEL  133 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~-----------~k~~~l-----------~~~~~~~~l~~~~  133 (530)
                      +.+|+||||||  +|+||+++++.|+++|++|++++|+.           +++..+           .+++.+.      
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   80 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK------   80 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC----------------------------------
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc------
Confidence            45789999999  89999999999999999999998753           111111           0110000      


Q ss_pred             cccCCCCCCCeEEEEecC------------CC--------HhhHHHHh-------CCCcEEEEcccCCC---C-----cc
Q 009648          134 ANKGIQPVEMLELVECDL------------EK--------RVQIEPAL-------GNASVVICCIGASE---K-----EV  178 (530)
Q Consensus       134 ~~~g~~~~~~v~~v~~Dl------------~d--------~~sl~~a~-------~~vD~VI~~Ag~~~---~-----~~  178 (530)
                         +. ....+.++.+|+            +|        .+++++++       +++|+||||||...   .     +.
T Consensus        81 ---~~-~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~  156 (319)
T 2ptg_A           81 ---PV-DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR  156 (319)
T ss_dssp             --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred             ---cc-cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence               00 000134454443            22        22444433       57999999998542   1     12


Q ss_pred             CCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHH-------H-CCC
Q 009648          179 FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGL  247 (530)
Q Consensus       179 ~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl  247 (530)
                      .++...+++|+.++.++++++...  ..++||++||......      .... ..|+.+|++++.+.+       . .|+
T Consensus       157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~------~~~~~~~Y~asKaal~~l~~~la~el~~~~gI  230 (319)
T 2ptg_A          157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV------IPGYGGGMSSAKAALESDCRTLAFEAGRARAV  230 (319)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc------cCccchhhHHHHHHHHHHHHHHHHHhccccCe
Confidence            234567899999999999998864  1269999999865321      1122 369999998876654       2 589


Q ss_pred             CEEEEEcCcccCCCcccccc---cce-----eecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          248 PYTIVRPGGMERPTDAYKET---HNI-----TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       248 ~~tIvRPg~V~Gp~~~~~~~---~~~-----~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++|+||+|.++.......   ...     .........+.+...+|||+++++++.+. .+..|+++.+.++..
T Consensus       231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             EEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred             eEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence            99999999998864221100   000     00001112334578999999999999763 335688998888753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.73  E-value=7.7e-18  Score=171.72  Aligned_cols=222  Identities=13%  Similarity=0.097  Sum_probs=140.8

Q ss_pred             CCCCEEEEECC--CcHHHHHHHHHHHhCCCeEEEEECCchhH------H-HHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA------E-NLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGA--tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~------~-~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      +.+|+||||||  +|+||+++++.|+++|++|++++|+....      . ...+.+.++  .     .+. ....+.++.
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~-----~~~-~~~~~~~~~   78 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKL--P-----DGS-LIEFAGVYP   78 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBC--T-----TSC-BCCCSCEEE
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhh--h-----ccc-ccccccccc
Confidence            46789999999  89999999999999999999999864210      0 000011111  0     010 001124444


Q ss_pred             ecC------------CC--------HhhHHHHh-------CCCcEEEEcccCCC---C-----ccCCCCcchHhHHHHHH
Q 009648          149 CDL------------EK--------RVQIEPAL-------GNASVVICCIGASE---K-----EVFDITGPYRIDFQATK  193 (530)
Q Consensus       149 ~Dl------------~d--------~~sl~~a~-------~~vD~VI~~Ag~~~---~-----~~~~~~~~~~vNv~gt~  193 (530)
                      +|+            +|        .+++++++       +++|+||||||...   .     +..++...+++|+.++.
T Consensus        79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~  158 (315)
T 2o2s_A           79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV  158 (315)
T ss_dssp             CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred             ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence            443            22        33444433       57999999999542   1     12234567899999999


Q ss_pred             HHHHHHHhc--CCCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCc
Q 009648          194 NLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTD  262 (530)
Q Consensus       194 ~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~  262 (530)
                      ++++++...  ..++||++||.......      ... ..|+.+|++.+.+.+        ..|++++.|+||+|.++..
T Consensus       159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~  232 (315)
T 2o2s_A          159 SLLQHFGPIMNEGGSAVTLSYLAAERVV------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA  232 (315)
T ss_dssp             HHHHHHSTTEEEEEEEEEEEEGGGTSCC------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred             HHHHHHHHHHhcCCEEEEEecccccccC------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence            999998754  12699999997653221      112 369999999887754        2699999999999987532


Q ss_pred             ccccc---cce--ee---cccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          263 AYKET---HNI--TL---SQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       263 ~~~~~---~~~--~~---~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      .....   ...  ..   .......+.+...+|+|+++++++.+. .+..|+++.+.++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          233 SAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            11000   000  00   001112344678999999999999753 33468888888874

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.71  E-value=9.2e-17  Score=164.91  Aligned_cols=228  Identities=11%  Similarity=0.130  Sum_probs=147.9

Q ss_pred             CCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH--h
Q 009648           80 DNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--V  155 (530)
Q Consensus        80 ~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--~  155 (530)
                      +|+||||||++  +||+++++.|+++|++|++.+|+.... -+.......+...............+.++.+|+.+.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN-IFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHH-HHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCcccc-ccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            57899999875  999999999999999999888775210 000000000000000000011224578899999876  6


Q ss_pred             ------------------hHHHHh-------CCCcEEEEcccCCC--------CccCCCCcchHhHHHHHHHHHHHHHhc
Q 009648          156 ------------------QIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAATIA  202 (530)
Q Consensus       156 ------------------sl~~a~-------~~vD~VI~~Ag~~~--------~~~~~~~~~~~vNv~gt~~Ll~aa~~~  202 (530)
                                        ++.+++       +++|+||||||...        .+..++...+++|+.++.++++++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              655554       46899999999531        122235667999999999999998754


Q ss_pred             --CCCEEEEEcCCCccCCCCccccccchh-HHHHHHHHHHHHHH-------H-CCCCEEEEEcCcccCCCccccccc---
Q 009648          203 --KVNHFIMVSSLGTNKFGFPAAILNLFW-GVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKETH---  268 (530)
Q Consensus       203 --gv~r~V~iSS~~v~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~-------~-~gl~~tIvRPg~V~Gp~~~~~~~~---  268 (530)
                        ..++||++||......      ..... .|+.+|++.+.+.+       . .|++++.|.||+|.++........   
T Consensus       161 m~~~g~Iv~isS~~~~~~------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~  234 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKV------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT  234 (329)
T ss_dssp             EEEEEEEEEEECGGGTSC------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred             HhhCCeEEEEeCccccCC------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence              1169999999865332      12233 79999999887654       3 599999999999976532110000   


Q ss_pred             -----------------------c-------------------eeecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCc
Q 009648          269 -----------------------N-------------------ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCK  305 (530)
Q Consensus       269 -----------------------~-------------------~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~  305 (530)
                                             .                   ..........+.+...+|||+++++++.+. .+..|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~  314 (329)
T 3lt0_A          235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQ  314 (329)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCc
Confidence                                   0                   000001122344578999999999999754 335788


Q ss_pred             EEEEeCCCC
Q 009648          306 VVEVIAETT  314 (530)
Q Consensus       306 vynv~~~~~  314 (530)
                      ++.+.++..
T Consensus       315 ~i~vdGG~~  323 (329)
T 3lt0_A          315 TIYVDNGLN  323 (329)
T ss_dssp             EEEESTTGG
T ss_pred             EEEEcCCee
Confidence            998888753

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.70  E-value=4.1e-18  Score=175.12  Aligned_cols=170  Identities=14%  Similarity=0.056  Sum_probs=121.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      .+.|+|+||||+||||++|+..|+++|+       +|+++++..  .+.......+.+               ..+.++ 
T Consensus         2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~---------------~~~~~~-   65 (327)
T 1y7t_A            2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED---------------CAFPLL-   65 (327)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT---------------TTCTTE-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc---------------cccccc-
Confidence            3457899999999999999999999996       899999865  222221111110               112233 


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEcCCCc-cCCCC-ccc-
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLGT-NKFGF-PAA-  223 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iSS~~v-~~~~~-~~~-  223 (530)
                      +|+.+.+.+.++++++|+|||+||.......+....+++|+.+++++++++++++ .+ +||++|+... ..+-. +.. 
T Consensus        66 ~di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           66 AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             EEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             CCeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcC
Confidence            6777766788899999999999997654334445678999999999999999985 65 7888776431 00000 001 


Q ss_pred             cccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcc
Q 009648          224 ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDA  263 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~  263 (530)
                      ...+...|+.+|...|++++    ..|+++++||+++|||+++.
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            13345569999999888764    46999999999999998753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.68  E-value=4.7e-16  Score=172.46  Aligned_cols=224  Identities=16%  Similarity=0.089  Sum_probs=154.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC-CCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-EKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl-~d~~  155 (530)
                      .+++|++|||||+++||+++++.|+++|++|++.+|..  .+.+.+++.+.         |    .++..+.+|+ .+.+
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~---------g----~~~~~~~~Dv~~~~~  383 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA---------G----GEAWPDQHDVAKDSE  383 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT---------T----CEEEEECCCHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc---------C----CeEEEEEcChHHHHH
Confidence            35678999999999999999999999999999988642  23333333322         1    3566777888 5543


Q ss_pred             h----HHHHhCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCc
Q 009648          156 Q----IEPALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       156 s----l~~a~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      .    +.+.++++|++|||||....      +..++...+++|+.|+.++.+++.    +.+.++||++||......   
T Consensus       384 ~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~---  460 (604)
T 2et6_A          384 AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG---  460 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC---
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC---
Confidence            3    22345789999999996432      223356779999999888877764    445579999999754221   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC  294 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~  294 (530)
                         ......|+.+|+.+..+.+       ..|++++.|.||. .++...     .. ...   ........+|||.++++
T Consensus       461 ---~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~-----~~-~~~---~~~~~~~pe~vA~~v~~  527 (604)
T 2et6_A          461 ---NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTL-----SI-MRE---QDKNLYHADQVAPLLVY  527 (604)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHH
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccc-----cc-Cch---hhccCCCHHHHHHHHHH
Confidence               1224579999999887765       3799999999994 433211     00 000   01134578999999999


Q ss_pred             HHhCCCCCCCcEEEEeCCC-----------------CCChhHHHHHHHhcCCCC
Q 009648          295 MAKNRSLSYCKVVEVIAET-----------------TAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       295 ll~~~~~~~g~vynv~~~~-----------------~~t~~~i~ell~~v~g~~  331 (530)
                      ++.+.....|+++.+.++.                 .++..++.+.+.++....
T Consensus       528 L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  581 (604)
T 2et6_A          528 LGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT  581 (604)
T ss_dssp             TTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred             HhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence            9876443467888877652                 346777888888777654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.67  E-value=1.3e-15  Score=169.02  Aligned_cols=203  Identities=17%  Similarity=0.100  Sum_probs=139.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc---------hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~---------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      +++|++|||||+++||+++++.|+++|++|++.+|+.         ++++.+.+++...         |    ..+   .
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~---------g----~~~---~   69 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN---------G----GVA---V   69 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT---------T----CEE---E
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc---------C----CeE---E
Confidence            4678999999999999999999999999999998765         4555555444332         1    122   2


Q ss_pred             ecCCCHhhHH-------HHhCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEc
Q 009648          149 CDLEKRVQIE-------PALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVS  211 (530)
Q Consensus       149 ~Dl~d~~sl~-------~a~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iS  211 (530)
                      +|+.|.++++       +.++++|++|||||....      +..++...+++|+.|+.++.+++.    +.+.++||++|
T Consensus        70 ~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnis  149 (604)
T 2et6_A           70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTS  149 (604)
T ss_dssp             EECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence            4666654332       334689999999996432      223356779999999888877754    45667999999


Q ss_pred             CCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCC
Q 009648          212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       212 S~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~  284 (530)
                      |......      ......|+.+|+++..+.+       ..|++++.|.|| +..+..   ..  .. .  .. ......
T Consensus       150 S~ag~~~------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~---~~--~~-~--~~-~~~~~~  213 (604)
T 2et6_A          150 SPAGLYG------NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMT---ES--IM-P--PP-MLEKLG  213 (604)
T ss_dssp             CHHHHHC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHH---HT--TS-C--HH-HHTTCS
T ss_pred             CHHHcCC------CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccc---cc--cC-C--hh-hhccCC
Confidence            9754221      1224579999999887765       379999999997 332110   00  00 0  00 112368


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      .+|||.++++++.+.....|+++.+.++
T Consensus       214 pe~vA~~v~~L~s~~~~itG~~~~vdgG  241 (604)
T 2et6_A          214 PEKVAPLVLYLSSAENELTGQFFEVAAG  241 (604)
T ss_dssp             HHHHHHHHHHHTSSSCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHHhCCcccCCCCEEEECCC
Confidence            9999999999998765556888888765

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.66  E-value=1.4e-16  Score=166.85  Aligned_cols=202  Identities=13%  Similarity=0.046  Sum_probs=134.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECCchhHH------------HHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~~~k~~------------~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ..+|++|||||+++||+++++.|++ +|++|++++|+.+...            .+.+.+++.         |    ..+
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---------G----~~a  111 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---------G----LYA  111 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---------T----CCE
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---------C----Cce
Confidence            5578999999999999999999999 9999999998765321            122222221         2    468


Q ss_pred             EEEEecCCCHhhHHHHh-------CCCcEEEEcccCCC--------------C--------------------------c
Q 009648          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASE--------------K--------------------------E  177 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~--------------~--------------------------~  177 (530)
                      ..+.+|++|.+++++++       +++|++|||||...              .                          +
T Consensus       112 ~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t  191 (405)
T 3zu3_A          112 KSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPAT  191 (405)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCC
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCC
Confidence            88999999988776655       57899999998631              0                          1


Q ss_pred             cCCCCcchHhHHHHHH-HHHHHHHhc----CCCEEEEEcCCCccCCCCccccccch--hHHHHHHHHHHHHHHH------
Q 009648          178 VFDITGPYRIDFQATK-NLVDAATIA----KVNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIA------  244 (530)
Q Consensus       178 ~~~~~~~~~vNv~gt~-~Ll~aa~~~----gv~r~V~iSS~~v~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~~------  244 (530)
                      ..++...+++|..+.. .+++++...    +.+++|++||.+....      ...+  ..|+.+|..++.+.+.      
T Consensus       192 ~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~------~p~~~~~aY~AaKaal~~ltrsLA~Ela  265 (405)
T 3zu3_A          192 QSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT------HDIYWNGSIGAAKKDLDQKVLAIRESLA  265 (405)
T ss_dssp             HHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc------CCCccchHHHHHHHHHHHHHHHHHHHhC
Confidence            1123445667776665 566665432    2258999999876321      1122  5799999999987652      


Q ss_pred             -C-CCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          245 -S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       245 -~-gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                       . |+++++|.||.|.++...................+.+-..+|+++++.+|+.+
T Consensus       266 ~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          266 AHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             TTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred             cccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence             6 99999999999987532111110000000001122234457899999999876

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.66  E-value=9.9e-17  Score=169.22  Aligned_cols=204  Identities=12%  Similarity=0.040  Sum_probs=134.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECCchhHH------------HHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~~~k~~------------~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ..+|++|||||+++||+++++.|++ +|++|++++|+.+...            .+.+.+++.         |    ..+
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---------G----~~a  125 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---------G----LYS  125 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---------T----CCE
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---------C----CcE
Confidence            3578999999999999999999999 9999999999865432            122222222         2    468


Q ss_pred             EEEEecCCCHhhHHHHh--------CCCcEEEEcccCC-------------CC---------------------------
Q 009648          145 ELVECDLEKRVQIEPAL--------GNASVVICCIGAS-------------EK---------------------------  176 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~--------~~vD~VI~~Ag~~-------------~~---------------------------  176 (530)
                      ..+.+|++|.+++++++        +++|++|||||..             ..                           
T Consensus       126 ~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~  205 (422)
T 3s8m_A          126 KSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPA  205 (422)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCC
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCC
Confidence            88999999987765544        5689999999862             00                           


Q ss_pred             ccCCCCcchHhHHHHHH-HHHHHHHhc----CCCEEEEEcCCCccCCCCccccccch--hHHHHHHHHHHHHHH------
Q 009648          177 EVFDITGPYRIDFQATK-NLVDAATIA----KVNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------  243 (530)
Q Consensus       177 ~~~~~~~~~~vNv~gt~-~Ll~aa~~~----gv~r~V~iSS~~v~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------  243 (530)
                      +..++...+++|..+.. .+++++...    +.++||++||.+....      ...+  ..|+.+|++++.+.+      
T Consensus       206 t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~------~p~~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          206 SAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT------WPIYWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             CHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG------HHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc------CCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            01112233555555554 666666533    2258999999865321      1122  579999999987765      


Q ss_pred             -HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCC
Q 009648          244 -ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       244 -~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                       ..|+++++|.||.|.++...................+..-..+|||+++.+|+.+.-
T Consensus       280 a~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l  337 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL  337 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             CccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence             279999999999998875322111110000000112223446899999999997753

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.65  E-value=4.8e-16  Score=187.03  Aligned_cols=214  Identities=14%  Similarity=0.003  Sum_probs=147.3

Q ss_pred             CCCCCEEEEECCCcH-HHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~-IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .+.+++||||||+|+ ||+++++.|+++|++|+++ .|+.++...+.+.+.+. +       + ....++.++.+|+.|.
T Consensus       672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~-~-------~-~~g~~v~~v~~DVsd~  742 (1887)
T 2uv8_A          672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK-Y-------G-AKGSTLIVVPFNQGSK  742 (1887)
T ss_dssp             CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHH-H-------C-CTTCEEEEEECCTTCH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHH-h-------h-cCCCeEEEEEecCCCH
Confidence            356789999999998 9999999999999999998 57777666655544221 0       0 0125689999999999


Q ss_pred             hhHHHHhC-------------CCcEEEEcccCCCCc---------cCCCCcchHhHHHHHHHHHHHHHhc------CCCE
Q 009648          155 VQIEPALG-------------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATIA------KVNH  206 (530)
Q Consensus       155 ~sl~~a~~-------------~vD~VI~~Ag~~~~~---------~~~~~~~~~vNv~gt~~Ll~aa~~~------gv~r  206 (530)
                      +++..+++             .+|+||||||.....         ..++...+++|+.++.+++++++..      +.++
T Consensus       743 ~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~  822 (1887)
T 2uv8_A          743 QDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQV  822 (1887)
T ss_dssp             HHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEE
T ss_pred             HHHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCE
Confidence            88877652             589999999965332         1234567999999999999988432      2259


Q ss_pred             EEEEcCCCccCCCCccccccchhHHHHHHHHHHHH-HH----H--CCCCEEEEEcCcccC-CCcccccccceeecccCcc
Q 009648          207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-LI----A--SGLPYTIVRPGGMER-PTDAYKETHNITLSQEDTL  278 (530)
Q Consensus       207 ~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~-l~----~--~gl~~tIvRPg~V~G-p~~~~~~~~~~~~~~~~~~  278 (530)
                      ||++||......        ....|+.+|++.+.+ .+    +  ..++++.|+||+|.| +.........-.+..   .
T Consensus       823 IVnISS~ag~~g--------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~---~  891 (1887)
T 2uv8_A          823 ILPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEK---M  891 (1887)
T ss_dssp             EEEECSCTTCSS--------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHT---T
T ss_pred             EEEEcChHhccC--------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHh---c
Confidence            999999865332        235799999998887 32    1  228999999999984 321100000000000   1


Q ss_pred             cCCCCCHHHHHHHHHHHHhCC--CCCCCcEEEEe
Q 009648          279 FGGQVSNLQVAELLACMAKNR--SLSYCKVVEVI  310 (530)
Q Consensus       279 ~~g~V~v~DVA~ai~~ll~~~--~~~~g~vynv~  310 (530)
                      .....+.+|||+++++++.+.  .+..|+++.+.
T Consensus       892 plr~~sPEEVA~avlfLaSd~~as~iTGq~I~VD  925 (1887)
T 2uv8_A          892 GVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD  925 (1887)
T ss_dssp             SCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred             CCCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence            113458999999999998765  12246677763

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.64  E-value=1.1e-15  Score=183.55  Aligned_cols=213  Identities=13%  Similarity=-0.011  Sum_probs=146.1

Q ss_pred             CCCCEEEEECCCcH-HHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~-IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+++||||||+|+ ||+++++.|+++|++|++++ |+..+.....+.+.+. +       + ....++.++.+|+.|.+
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~e-l-------~-~~G~~v~~v~~DVsd~e  720 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYAR-C-------G-ARGSQLVVVPFNQGSKQ  720 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHH-H-------C-CTTCEEEEEECCTTCHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHH-h-------h-ccCCeEEEEEcCCCCHH
Confidence            56789999999999 99999999999999999985 6666655544433211 0       0 01246899999999998


Q ss_pred             hHHHHh----------C-CCcEEEEcccCCCCc---------cCCCCcchHhHHHHHHHHHHHHH--h----cCCCEEEE
Q 009648          156 QIEPAL----------G-NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAAT--I----AKVNHFIM  209 (530)
Q Consensus       156 sl~~a~----------~-~vD~VI~~Ag~~~~~---------~~~~~~~~~vNv~gt~~Ll~aa~--~----~gv~r~V~  209 (530)
                      ++.+++          + .+|+||||||.....         ..++...+++|+.++.+++++++  .    .+.++||+
T Consensus       721 sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVn  800 (1878)
T 2uv9_A          721 DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILP  800 (1878)
T ss_dssp             HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCE
T ss_pred             HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEE
Confidence            887765          2 589999999965332         12245678999999999887743  2    13369999


Q ss_pred             EcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCccc-CCCcccccccceeecccCcccCC
Q 009648          210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFGG  281 (530)
Q Consensus       210 iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~-Gp~~~~~~~~~~~~~~~~~~~~g  281 (530)
                      +||......        ....|+.+|+.++.+++.       .+++++.|.||++. ++.........-.+..   ....
T Consensus       801 ISS~ag~~g--------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~---~plr  869 (1878)
T 2uv9_A          801 LSPNHGTFG--------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK---LGVR  869 (1878)
T ss_dssp             ECSCSSSSS--------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT---TTCC
T ss_pred             EcchhhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh---cCCC
Confidence            999865332        134699999998877541       23899999999998 5432110000000000   1113


Q ss_pred             CCCHHHHHHHHHHHHhCCC--CCCCcEEEEe
Q 009648          282 QVSNLQVAELLACMAKNRS--LSYCKVVEVI  310 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~--~~~g~vynv~  310 (530)
                      ..+.+|+|+++++++.+..  +..|.++.+.
T Consensus       870 ~~sPeEVA~avlfLaSd~a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          870 TFSQQEMAFNLLGLMAPAIVNLCQSDPVFAD  900 (1878)
T ss_dssp             CBCHHHHHHHHHHHHSHHHHHHHTTSCEEEE
T ss_pred             CCCHHHHHHHHHHHhCCcccccccCcEEEEE
Confidence            4689999999999986542  2346777763

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.61  E-value=2e-16  Score=184.91  Aligned_cols=212  Identities=13%  Similarity=-0.013  Sum_probs=144.0

Q ss_pred             CCCCEEEEECCCcH-HHHHHHHHHHhCCCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~-IG~~Lv~~Ll~~G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+++||||||+|+ ||+++++.|+++|++|+++ .|+.++...+.+++.+.         ......++.++.+|+.|.+
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ae---------l~a~Ga~V~vV~~DVTD~e  544 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK---------YGAKGSTLIVVPFNQGSKQ  544 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTT---------TCCTTCEEEEEECCSSSTT
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHH---------hhcCCCeEEEEEeCCCCHH
Confidence            56789999999998 9999999999999999998 57666555443332110         0011246899999999998


Q ss_pred             hHHHHhC-------------CCcEEEEcccCCCCc---------cCCCCcchHhHHHHHHHHHHHHHh--c----CCCEE
Q 009648          156 QIEPALG-------------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATI--A----KVNHF  207 (530)
Q Consensus       156 sl~~a~~-------------~vD~VI~~Ag~~~~~---------~~~~~~~~~vNv~gt~~Ll~aa~~--~----gv~r~  207 (530)
                      +++++++             ++|+||||||.....         ..++...+++|+.++.+++++++.  .    +.++|
T Consensus       545 sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrI  624 (1688)
T 2pff_A          545 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI  624 (1688)
T ss_dssp             HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEEC
T ss_pred             HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEE
Confidence            8877652             589999999965332         122356789999999999998732  1    23589


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHH-HH------CCCCEEEEEcCcccC-CCcccccccceeecccCccc
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL-IA------SGLPYTIVRPGGMER-PTDAYKETHNITLSQEDTLF  279 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l-~~------~gl~~tIvRPg~V~G-p~~~~~~~~~~~~~~~~~~~  279 (530)
                      |++||......        ....|+.+|++.+.++ +.      ..++++.|+||+|.| +.....  .... .......
T Consensus       625 VnISSiAG~~G--------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--e~~~-~~l~~ip  693 (1688)
T 2pff_A          625 LPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--NIIA-EGIEKMG  693 (1688)
T ss_dssp             CCCCSCTTTSS--------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--TTCS-TTTSSSS
T ss_pred             EEEEChHhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--hHHH-HHHHhCC
Confidence            99999765332        2357999999999983 31      238899999999984 321100  0000 0000011


Q ss_pred             CCCCCHHHHHHHHHHHHhCC--CCCCCcEEEE
Q 009648          280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEV  309 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~--~~~~g~vynv  309 (530)
                      ....+.+|+|+++++++.+.  .+..|+++.+
T Consensus       694 lR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          694 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            13457899999999999765  1123666655

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.60  E-value=7.6e-16  Score=163.15  Aligned_cols=203  Identities=9%  Similarity=0.028  Sum_probs=130.6

Q ss_pred             CCCCEEEEECCCcHHHHH--HHHHHHhCCCeEEEEECCchh------------HHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           78 KDDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~--Lv~~Ll~~G~~V~~~~R~~~k------------~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      ..+|+||||||+++||++  +++.|+++|++|++++|+...            ...+.+..++.             ..+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------g~~  124 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK-------------GLV  124 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT-------------TCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc-------------CCc
Confidence            567899999999999999  999999999999999997643            22332222221             256


Q ss_pred             eEEEEecCCCHhhHHHHh-------CCCcEEEEcccCCC--------------C--------------------------
Q 009648          144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASE--------------K--------------------------  176 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~--------------~--------------------------  176 (530)
                      +.++.+|+.|.+++++++       +++|++|||||...              .                          
T Consensus       125 ~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~  204 (418)
T 4eue_A          125 AKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA  204 (418)
T ss_dssp             EEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC
T ss_pred             EEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCC
Confidence            889999999998877665       46899999998630              0                          


Q ss_pred             ccCCCCcchHhHHHHHH-HHHHHHHhcC----CCEEEEEcCCCccCCCCccccccch--hHHHHHHHHHHHHHH------
Q 009648          177 EVFDITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------  243 (530)
Q Consensus       177 ~~~~~~~~~~vNv~gt~-~Ll~aa~~~g----v~r~V~iSS~~v~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------  243 (530)
                      +..++...+++|..+.. .+++++...+    .+++|++||.+....      ...+  ..|+.+|.+++.+.+      
T Consensus       205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~------~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          205 SIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT------YKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             CHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG------TTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC------CCccccHHHHHHHHHHHHHHHHHHHHh
Confidence            01112223445544444 5556655432    258999999865321      1223  579999999887754      


Q ss_pred             -H-CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCC
Q 009648          244 -A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       244 -~-~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                       . .|+++++|.||.|.++......................-..+|+++++.+++.+.
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~  336 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEK  336 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             CCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhcc
Confidence             4 6899999999999875321111000000000001111234578888888888764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.53  E-value=2.5e-14  Score=163.19  Aligned_cols=201  Identities=16%  Similarity=0.152  Sum_probs=144.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHH-hCCC-eEEEEECCc---hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELL-KLGF-RVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll-~~G~-~V~~~~R~~---~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ..++++|||||+|+||+.+++.|+ ++|+ +|++++|+.   ++.+.+.++++..         |    .++.++.||++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---------G----~~v~~~~~Dvs  594 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---------G----AEVSLQACDVA  594 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTT
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---------C----CcEEEEEeecC
Confidence            457899999999999999999999 7998 599999994   4455555544433         2    57899999999


Q ss_pred             CHhhHHHHhC------CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC
Q 009648          153 KRVQIEPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       153 d~~sl~~a~~------~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~  220 (530)
                      |.++++++++      .+|+||||||....      +..++...+++|+.|+.+|.+++. ... +||++||......  
T Consensus       595 d~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g--  670 (795)
T 3slk_A          595 DRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLG--  670 (795)
T ss_dssp             CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHT--
T ss_pred             CHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCC--
Confidence            9999998884      46999999996532      223355678899999999999983 334 8999999865322  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                          ......|+.+|...+.+.+   ..|++++.|.||.+.+.+-......... ..........+..+++.+++..++.
T Consensus       671 ----~~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~~-~~~~~~g~~~l~~~e~~~~~~~~l~  745 (795)
T 3slk_A          671 ----SGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQ-DRLARSGLLPISTEEGLSQFDAACG  745 (795)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHHH-HHHHHTTBCCCCHHHHHHHHHHHHT
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHHH-HHHHhcCCCCCCHHHHHHHHHHHHh
Confidence                1234679999988876654   4899999999999976542110000000 0000111235788999999888887


Q ss_pred             CCC
Q 009648          298 NRS  300 (530)
Q Consensus       298 ~~~  300 (530)
                      .+.
T Consensus       746 ~~~  748 (795)
T 3slk_A          746 GAH  748 (795)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            664

>3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum}

Probab=99.51  E-value=6.6e-15  Score=89.97  Aligned_cols=26  Identities=69%  Similarity=1.188  Sum_probs=24.2

Q ss_pred             cCCCCCCcCccCCCCCCCCCCCCCCC
Q 009648          437 SKARPLSPYFAYEDLKPPSSPSPTPS  462 (530)
Q Consensus       437 ~~~~plspy~~y~~lk~~~~~~~~~~  462 (530)
                      ++.||||||++|+||||||||+|++|
T Consensus         1 k~~rPlSpy~~Y~dlKPPsSPsPs~P   26 (26)
T 3mhp_C            1 KTEQPLSPYTAYDDLKPPSSPSPTKP   26 (26)
T ss_dssp             CCCCCSSTTTTBTTSSCSSCSSCCCC
T ss_pred             CCccccCccccccccCCCCCCCCCCC
Confidence            46899999999999999999999976

>3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum}

Probab=99.37  E-value=2.1e-13  Score=83.33  Aligned_cols=25  Identities=48%  Similarity=0.914  Sum_probs=23.3

Q ss_pred             CCCCCCCCccCCCCCCCCCCCCCCC
Q 009648          504 SIHHHSPYHMYEDLKPPTSPIPSPK  528 (530)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~  528 (530)
                      ..||||||+.|+||||||||+||++
T Consensus         2 ~~rPlSpy~~Y~dlKPPsSPsPs~P   26 (26)
T 3mhp_C            2 TEQPLSPYTAYDDLKPPSSPSPTKP   26 (26)
T ss_dssp             CCCCSSTTTTBTTSSCSSCSSCCCC
T ss_pred             CccccCccccccccCCCCCCCCCCC
Confidence            4799999999999999999999975

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.33  E-value=6.5e-12  Score=107.80  Aligned_cols=94  Identities=21%  Similarity=0.154  Sum_probs=79.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++++|+|+|+ |++|+.+++.|+++| ++|++++|+.++.+.+.                   ..++.++.+|+.+.+.+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------------------~~~~~~~~~d~~~~~~~   63 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------------------RMGVATKQVDAKDEAGL   63 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------------------TTTCEEEECCTTCHHHH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------------------hCCCcEEEecCCCHHHH
Confidence            3578999999 999999999999999 99999999988766543                   14678899999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEE
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V  208 (530)
                      .++++++|+||||++..                ...+++++|.+.|+++|.
T Consensus        64 ~~~~~~~d~vi~~~~~~----------------~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           64 AKALGGFDAVISAAPFF----------------LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             HHHTTTCSEEEECSCGG----------------GHHHHHHHHHHTTCEEEC
T ss_pred             HHHHcCCCEEEECCCch----------------hhHHHHHHHHHhCCCEEE
Confidence            99999999999998631                247889999999985554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.31  E-value=2e-11  Score=153.90  Aligned_cols=227  Identities=15%  Similarity=0.107  Sum_probs=140.3

Q ss_pred             CCCCEEEEECCCcH-HHHHHHHHHHhCCCeEEEEECCchh-----HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC
Q 009648           78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL  151 (530)
Q Consensus        78 ~~~k~VLVTGAtG~-IG~~Lv~~Ll~~G~~V~~~~R~~~k-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl  151 (530)
                      ..+|++|||||+++ ||+++++.|+++|++|++++|+.++     ++.+.+++..             ...++.++.+|+
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-------------~G~~~~~v~~Dv 2200 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-------------FDATLWVVPANM 2200 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-------------TTCEEEEEECCT
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-------------cCCeEEEEEecC
Confidence            57899999999999 9999999999999999999998765     3333222111             124688899999


Q ss_pred             CCHhhHHHHh-----------CCCcEEEEcccC----CC-------CccCCCCcc----hHhHHHHHHHHHHHHHh----
Q 009648          152 EKRVQIEPAL-----------GNASVVICCIGA----SE-------KEVFDITGP----YRIDFQATKNLVDAATI----  201 (530)
Q Consensus       152 ~d~~sl~~a~-----------~~vD~VI~~Ag~----~~-------~~~~~~~~~----~~vNv~gt~~Ll~aa~~----  201 (530)
                      +|.+++++++           +++|++|||||.    ..       ....++...    +++|+.++..+++++..    
T Consensus      2201 td~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D         2201 ASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAE 2280 (3089)
T ss_dssp             TCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998877663           358999999996    11       122334444    78888888888777653    


Q ss_pred             cCCC---EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH----H----CCCCEEEEEcCcccCCCcccccccce
Q 009648          202 AKVN---HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERPTDAYKETHNI  270 (530)
Q Consensus       202 ~gv~---r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tIvRPg~V~Gp~~~~~~~~~~  270 (530)
                      .+.+   .+|...+......+       ....|+.+|++++.+.+    +    .+++++.+.||+|.+....... ...
T Consensus      2281 ~~~g~~~~ii~~~ss~~g~~g-------~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~-~~~ 2352 (3089)
T 3zen_D         2281 RDIASRLHVVLPGSPNRGMFG-------GDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN-DAI 2352 (3089)
T ss_dssp             TTCCCCEEEEEEECSSTTSCS-------SCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT-TTT
T ss_pred             cCCCceeEEEEECCcccccCC-------CchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc-hhH
Confidence            3321   23332222111111       12369999999887765    2    2578999999999743211000 000


Q ss_pred             eecccCcccCCCCCHHHHHHHHHHHHhCCCC--CCCcEE--EEeCCCCCChhHHHHHHHh
Q 009648          271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSL--SYCKVV--EVIAETTAPLTPMEELLAK  326 (530)
Q Consensus       271 ~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~--~~g~vy--nv~~~~~~t~~~i~ell~~  326 (530)
                      . .............+|||.++++|+.....  ..+..+  .+.++-.....++.+++.+
T Consensus      2353 ~-~~~~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~ 2411 (3089)
T 3zen_D         2353 V-SAVEEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAK 2411 (3089)
T ss_dssp             H-HHHGGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHH
T ss_pred             H-HHHHhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHH
Confidence            0 00001112334799999999999865421  122333  3345543323455555543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.29  E-value=1.8e-11  Score=154.06  Aligned_cols=167  Identities=15%  Similarity=0.087  Sum_probs=120.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++++|||||+|+||+.+++.|+++|++ |++++|+..+.....+.++++.-      .|    .++.++.+|+.|.++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~------~g----~~v~~~~~Dvsd~~~ 1951 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR------QG----VQVLVSTSNASSLDG 1951 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH------TT----CEEEEECCCSSSHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh------CC----CEEEEEecCCCCHHH
Confidence            35789999999999999999999999986 78888987554332222222110      01    468889999999988


Q ss_pred             HHHHh------CCCcEEEEcccCCC------CccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcc
Q 009648          157 IEPAL------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l~~a~------~~vD~VI~~Ag~~~------~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~  222 (530)
                      +++++      ..+|+||||||...      .+..++...+++|+.|+.+|.+++...  ..++||++||...... .  
T Consensus      1952 v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g-~-- 2028 (2512)
T 2vz8_A         1952 ARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG-N-- 2028 (2512)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT-C--
T ss_pred             HHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC-C--
Confidence            77665      46899999999542      244557788999999999998887653  3479999999755322 1  


Q ss_pred             ccccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCC
Q 009648          223 AILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERP  260 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp  260 (530)
                         .....|+.+|...+.+.+   ..|++...+..|.+-+-
T Consensus      2029 ---~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A         2029 ---AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp             ---TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCTT
T ss_pred             ---CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCCc
Confidence               224579999999998876   58999988888876443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.06  E-value=2.3e-10  Score=117.55  Aligned_cols=118  Identities=10%  Similarity=0.045  Sum_probs=87.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECC----chhHHHHHHHHHHhhhhccccccCCCCCCCeEEE
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRS----VQRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~----~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v  147 (530)
                      +.++|+||||+||||++++..|+..|+       +|++++++    .++.......+.+.          ..  . +   
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~----------~~--~-~---   67 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC----------AF--P-L---   67 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT----------TC--T-T---
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh----------cc--c-c---
Confidence            357899999999999999999999885       89999888    54444332222210          00  1 1   


Q ss_pred             EecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEcC
Q 009648          148 ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS  212 (530)
Q Consensus       148 ~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iSS  212 (530)
                      ..|+....++.++++++|+|||+||.......+....+..|+.+++++++++++.+ .+ +||++|.
T Consensus        68 ~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN  134 (329)
T 1b8p_A           68 LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN  134 (329)
T ss_dssp             EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence            13555555688899999999999997654433444568899999999999999984 65 8898886

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.05  E-value=9.2e-10  Score=112.95  Aligned_cols=118  Identities=14%  Similarity=0.103  Sum_probs=86.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++|+|+|+||+||||..++..|+.+|  ++|++++++.+  ......+.+.           .....+..    +.+..+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~-----------~~~~~v~~----~~~t~d   69 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHM-----------DTGAVVRG----FLGQQQ   69 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTS-----------CSSCEEEE----EESHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcc-----------cccceEEE----EeCCCC
Confidence            45789999999999999999999999  89999998875  1111111111           00112222    233456


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.++++++|+|||+||............+..|+.+++++++++.+.+.+.+|+++|-
T Consensus        70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            888999999999999965544344456789999999999999999988888888874

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.02  E-value=1.4e-09  Score=111.00  Aligned_cols=119  Identities=18%  Similarity=0.127  Sum_probs=84.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEEC--CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R--~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+|+||||+||||++++..|+..|+  ++.++++  +.++.+.....+.+..         ......+.+...|    ++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~---------~~~~~~~~i~~~~----d~   67 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---------AGTRSDANIYVES----DE   67 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---------TTSCCCCEEEEEE----TT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH---------HhcCCCeEEEeCC----cc
Confidence            4799999999999999999999884  6888888  6554444332332210         0000133333322    23


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.++++++|+|||+||............+..|+.+++++++++++++ +++|+++|-
T Consensus        68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            56779999999999997654433445568999999999999999998 888888873

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.02  E-value=8e-10  Score=111.05  Aligned_cols=82  Identities=21%  Similarity=0.189  Sum_probs=71.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+...              .++.++.+|+.|.+++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~--------------~~~~~~~~D~~~~~~~  182 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDASR  182 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc--------------CCcEEEEecCCCHHHH
Confidence            45789999999999999999999999999999999988887776655432              2456788999999999


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      .++++.+|+||||+|.
T Consensus       183 ~~~~~~~DvlVn~ag~  198 (287)
T 1lu9_A          183 AEAVKGAHFVFTAGAI  198 (287)
T ss_dssp             HHHTTTCSEEEECCCT
T ss_pred             HHHHHhCCEEEECCCc
Confidence            9999999999999975

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.93  E-value=3.6e-09  Score=93.62  Aligned_cols=100  Identities=17%  Similarity=0.185  Sum_probs=75.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++|+|+|+ |++|+.+++.|.+.|++|++++|+.++.+.+.                   ..+..++.+|..+.+.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-------------------~~~~~~~~~d~~~~~~l~   64 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-------------------SYATHAVIANATEENELL   64 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-------------------TTCSEEEECCTTCHHHHH
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------------------HhCCEEEEeCCCCHHHHH
Confidence            3567999998 99999999999999999999999876544321                   123467889999988887


Q ss_pred             HH-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ++ ++++|+||++++..          .+.|    ..+++.+++.+.+++|..++
T Consensus        65 ~~~~~~~d~vi~~~~~~----------~~~~----~~~~~~~~~~~~~~ii~~~~  105 (144)
T 2hmt_A           65 SLGIRNFEYVIVAIGAN----------IQAS----TLTTLLLKELDIPNIWVKAQ  105 (144)
T ss_dssp             TTTGGGCSEEEECCCSC----------HHHH----HHHHHHHHHTTCSEEEEECC
T ss_pred             hcCCCCCCEEEECCCCc----------hHHH----HHHHHHHHHcCCCeEEEEeC
Confidence            76 78899999998741          1223    34666777788877776554

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.92  E-value=6.5e-09  Score=105.51  Aligned_cols=116  Identities=9%  Similarity=-0.020  Sum_probs=84.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEEC--CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R--~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+|+|+||+|+||..++..|+..|+  +++++++  +.++++.....+.+..        .  ....+.+.. |  +   
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~--------~--~~~~~~v~~-~--~---   64 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGI--------A--YDSNTRVRQ-G--G---   64 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHH--------T--TTCCCEEEE-C--C---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHH--------h--hCCCcEEEe-C--C---
Confidence            5899999999999999999999885  6888888  6655544333332220        0  112344443 2  2   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       .++++++|+|||+||............+..|+.+++++++++++.+.+.+|+++|-
T Consensus        65 -~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           65 -YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             -GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             -HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence             45688999999999965443333345689999999999999999988888888873

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.90  E-value=1.5e-08  Score=90.34  Aligned_cols=97  Identities=22%  Similarity=0.143  Sum_probs=73.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+++|+|+|+ |++|+++++.|.++|++|++++|++++.+.+.+                   .++.++.+|.+|.+.+.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~   64 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-------------------EGFDAVIADPTDESFYR   64 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-------------------CCCcEEECCCCCHHHHH
Confidence            3568999997 999999999999999999999999887666532                   35788999999999888


Q ss_pred             HH-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       159 ~a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                      ++ ++++|+||.+.+.           .+.|    ..++..+++.+..++|-.
T Consensus        65 ~~~~~~~d~vi~~~~~-----------~~~n----~~~~~~a~~~~~~~iia~  102 (141)
T 3llv_A           65 SLDLEGVSAVLITGSD-----------DEFN----LKILKALRSVSDVYAIVR  102 (141)
T ss_dssp             HSCCTTCSEEEECCSC-----------HHHH----HHHHHHHHHHCCCCEEEE
T ss_pred             hCCcccCCEEEEecCC-----------HHHH----HHHHHHHHHhCCceEEEE
Confidence            76 5789999998762           1233    345555666665455543

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.82  E-value=4.8e-08  Score=85.92  Aligned_cols=98  Identities=17%  Similarity=0.141  Sum_probs=73.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|+|+|+ |++|+.+++.|.+.|++|++++|++++.+.+.+.                  .++.++.+|..+.+.+.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~------------------~~~~~~~~d~~~~~~l~~   64 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLED   64 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh------------------cCcEEEEcCCCCHHHHHH
Confidence            468999986 9999999999999999999999998766554320                  246678899998887765


Q ss_pred             H-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       160 a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      + ++++|+||++.+..           ..|    ..+++.++..+.+++|..+
T Consensus        65 ~~~~~~d~vi~~~~~~-----------~~~----~~~~~~~~~~~~~~ii~~~  102 (140)
T 1lss_A           65 AGIEDADMYIAVTGKE-----------EVN----LMSSLLAKSYGINKTIARI  102 (140)
T ss_dssp             TTTTTCSEEEECCSCH-----------HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred             cCcccCCEEEEeeCCc-----------hHH----HHHHHHHHHcCCCEEEEEe
Confidence            5 68899999997531           222    3455667777777777644

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.79  E-value=5.4e-08  Score=101.26  Aligned_cols=165  Identities=10%  Similarity=-0.025  Sum_probs=106.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHH-hCCCeEEEEECCchh------------HHHHHHHHHHhhhhccccccCCCCCCCe
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEML  144 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll-~~G~~V~~~~R~~~k------------~~~l~~~~~~~~l~~~~~~~g~~~~~~v  144 (530)
                      ..+|+||||||+.+||++.+..|+ +.|..|+++.|..+.            ...+.+.+++.         |    ...
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~---------G----~~a  114 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE---------G----LYS  114 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH---------T----CCE
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc---------C----CCc
Confidence            457899999999999999999998 679999999986532            22333334333         2    578


Q ss_pred             EEEEecCCCHhhHHHHh-------CCCcEEEEcccCCCCccCC------------------------CC--------cch
Q 009648          145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD------------------------IT--------GPY  185 (530)
Q Consensus       145 ~~v~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~~~~~------------------------~~--------~~~  185 (530)
                      ..+.||+.|.+.+++++       +++|+|||++|.......+                        ..        ..-
T Consensus       115 ~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat  194 (401)
T 4ggo_A          115 VTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPAN  194 (401)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCC
T ss_pred             eeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCc
Confidence            89999999988877766       5789999999854211000                        00        001


Q ss_pred             HhHHHHHHH---------HHHHHHhcC----CCEEEEEcCCCccCCCCccccccch-hHHHHHHHHHHHHHHH-----CC
Q 009648          186 RIDFQATKN---------LVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIA-----SG  246 (530)
Q Consensus       186 ~vNv~gt~~---------Ll~aa~~~g----v~r~V~iSS~~v~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~~-----~g  246 (530)
                      +-++.++..         .+.+....+    ..++|-+|+.|....     ..... ..+|..|...|...+.     .+
T Consensus       195 ~eeie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t-----~P~Y~~G~mG~AKaaLEa~~r~La~eL~~  269 (401)
T 4ggo_A          195 DEEAAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEAT-----QALYRKGTIGKAKEHLEATAHRLNKENPS  269 (401)
T ss_dssp             HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG-----HHHHTTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCccee-----ecCCCccHHHHHHHHHHHHHHHHHHhcCC
Confidence            112233332         233333332    248888888766221     11111 2579999999988763     46


Q ss_pred             CCEEEEEcCcccCC
Q 009648          247 LPYTIVRPGGMERP  260 (530)
Q Consensus       247 l~~tIvRPg~V~Gp  260 (530)
                      +++.++.++.+.+.
T Consensus       270 ~~a~v~v~~a~vT~  283 (401)
T 4ggo_A          270 IRAFVSVNKGLVTR  283 (401)
T ss_dssp             EEEEEEECCCCCCT
T ss_pred             CcEEEEEcCccccc
Confidence            77888888777553

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.77  E-value=3.2e-08  Score=104.40  Aligned_cols=101  Identities=14%  Similarity=0.256  Sum_probs=80.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++|+|+|| |+||+.+++.|+++|   .+|++++|+.++.+.+.+.+...         +   ..++.++.+|+.|.+++
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~---------~---~~~~~~~~~D~~d~~~l   68 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK---------G---YGEIDITTVDADSIEEL   68 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT---------T---CCCCEEEECCTTCHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh---------c---CCceEEEEecCCCHHHH
Confidence            58999998 999999999999998   39999999999888877655432         0   14688999999999999


Q ss_pred             HHHhCC--CcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          158 EPALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       158 ~~a~~~--vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      .+++++  +|+||||++...                ...++++|.++|+ ++|-++
T Consensus        69 ~~~l~~~~~DvVin~ag~~~----------------~~~v~~a~l~~g~-~vvD~a  107 (405)
T 4ina_A           69 VALINEVKPQIVLNIALPYQ----------------DLTIMEACLRTGV-PYLDTA  107 (405)
T ss_dssp             HHHHHHHCCSEEEECSCGGG----------------HHHHHHHHHHHTC-CEEESS
T ss_pred             HHHHHhhCCCEEEECCCccc----------------ChHHHHHHHHhCC-CEEEec
Confidence            999987  899999998421                2466777777776 444443

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.76  E-value=4.6e-09  Score=112.38  Aligned_cols=114  Identities=18%  Similarity=0.232  Sum_probs=81.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|+|+| +|++|+++++.|++.|++|++++|+.++.+.+.+                 ...++.++.+|+.|.+++.+
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~-----------------~~~~~~~~~~Dv~d~~~l~~   64 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA-----------------GVQHSTPISLDVNDDAALDA   64 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT-----------------TCTTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH-----------------hcCCceEEEeecCCHHHHHH
Confidence            57899998 8999999999999999999999999876654321                 11357888999999999999


Q ss_pred             HhCCCcEEEEcccCCCCccC-----CC-CcchHh--HHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          160 ALGNASVVICCIGASEKEVF-----DI-TGPYRI--DFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~-----~~-~~~~~v--Nv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +++++|+||||++.......     .. ...+..  ....+.+++++|+++|+ +  +++..+
T Consensus        65 ~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv-~--~i~g~g  124 (450)
T 1ff9_A           65 EVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI-T--VMNEIG  124 (450)
T ss_dssp             HHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC-E--EECSCB
T ss_pred             HHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC-e--EEeCCC
Confidence            99999999999985322100     00 001100  12357889999999987 3  345444

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.73  E-value=4.5e-08  Score=101.62  Aligned_cols=95  Identities=20%  Similarity=0.227  Sum_probs=76.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|||+|+|| |++|+.+++.|.+ .++|.+.+|+..+++.+.                    ..+..+..|+.|.+++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------------------~~~~~~~~d~~d~~~l   71 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------------------EFATPLKVDASNFDKL   71 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------------------TTSEEEECCTTCHHHH
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------------------ccCCcEEEecCCHHHH
Confidence            34578999998 9999999998865 589999999987766542                    4567788999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      .++++++|+|||+++...                ...++++|.++|+ ++|=+|
T Consensus        72 ~~~~~~~DvVi~~~p~~~----------------~~~v~~~~~~~g~-~yvD~s  108 (365)
T 3abi_A           72 VEVMKEFELVIGALPGFL----------------GFKSIKAAIKSKV-DMVDVS  108 (365)
T ss_dssp             HHHHTTCSEEEECCCGGG----------------HHHHHHHHHHHTC-EEEECC
T ss_pred             HHHHhCCCEEEEecCCcc----------------cchHHHHHHhcCc-ceEeee
Confidence            999999999999987521                2467888888886 777665

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.66  E-value=2.4e-07  Score=83.74  Aligned_cols=76  Identities=13%  Similarity=0.157  Sum_probs=62.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++|+|+|+ |.+|+++++.|.+.|++|++++|+. ++.+.+...+                ..++.++.+|.+|.+.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----------------~~~~~~i~gd~~~~~~l~   65 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----------------GDNADVIPGDSNDSSVLK   65 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----------------CTTCEEEESCTTSHHHHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----------------cCCCeEEEcCCCCHHHHH
Confidence            467999995 9999999999999999999999984 4444432211                146889999999999988


Q ss_pred             HH-hCCCcEEEEccc
Q 009648          159 PA-LGNASVVICCIG  172 (530)
Q Consensus       159 ~a-~~~vD~VI~~Ag  172 (530)
                      ++ ++++|+||.+.+
T Consensus        66 ~a~i~~ad~vi~~~~   80 (153)
T 1id1_A           66 KAGIDRCRAILALSD   80 (153)
T ss_dssp             HHTTTTCSEEEECSS
T ss_pred             HcChhhCCEEEEecC
Confidence            87 899999999975

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.60  E-value=3.5e-07  Score=85.05  Aligned_cols=96  Identities=14%  Similarity=0.133  Sum_probs=73.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++|+|+| .|.+|+.+++.|.+. |++|++++|++++.+.+.+                   .++.++.+|..+.+.+
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-------------------~g~~~~~gd~~~~~~l   97 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-------------------EGRNVISGDATDPDFW   97 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-------------------TTCCEEECCTTCHHHH
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-------------------CCCCEEEcCCCCHHHH
Confidence            356799998 699999999999999 9999999999987665432                   3467788999998888


Q ss_pred             HHH--hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CCEEEE
Q 009648          158 EPA--LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIM  209 (530)
Q Consensus       158 ~~a--~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~r~V~  209 (530)
                      .++  ++++|+||.+.+.               ......++..+++.+ ..++|.
T Consensus        98 ~~~~~~~~ad~vi~~~~~---------------~~~~~~~~~~~~~~~~~~~ii~  137 (183)
T 3c85_A           98 ERILDTGHVKLVLLAMPH---------------HQGNQTALEQLQRRNYKGQIAA  137 (183)
T ss_dssp             HTBCSCCCCCEEEECCSS---------------HHHHHHHHHHHHHTTCCSEEEE
T ss_pred             HhccCCCCCCEEEEeCCC---------------hHHHHHHHHHHHHHCCCCEEEE
Confidence            887  7899999998753               122344556666665 345554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.59  E-value=1e-07  Score=97.90  Aligned_cols=117  Identities=12%  Similarity=0.086  Sum_probs=83.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--e-----EEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF--R-----VRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~-----V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      .++|+||||+|+||.+++..|+..|.  +     +++++++.  ++.+.....+.+.          ..  +.+.    +
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~----------~~--~~~~----~   66 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC----------AL--PLLK----D   66 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------CC--TTEE----E
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhh----------hh--cccC----C
Confidence            46899999999999999999998874  5     88998864  3444433333321          00  1121    2


Q ss_pred             CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC--EEEEEcC
Q 009648          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSS  212 (530)
Q Consensus       151 l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~--r~V~iSS  212 (530)
                      +.......++++++|+||++||.......+....++.|+..++++++++++++.+  +||.+|.
T Consensus        67 ~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           67 VIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             EEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            2112345778999999999999765544455677999999999999999998765  5777665

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.58  E-value=3.8e-07  Score=82.73  Aligned_cols=101  Identities=14%  Similarity=0.056  Sum_probs=74.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.                  ...++.++.+|..+.+.+
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~------------------~~~g~~~~~~d~~~~~~l   77 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLN------------------SEFSGFTVVGDAAEFETL   77 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC------------------TTCCSEEEESCTTSHHHH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH------------------hcCCCcEEEecCCCHHHH
Confidence            44678999995 99999999999999999999999987654321                  013456788999888777


Q ss_pred             HHH-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh-cCCCEEEEEcC
Q 009648          158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSS  212 (530)
Q Consensus       158 ~~a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~-~gv~r~V~iSS  212 (530)
                      .++ ++++|+||.+.+..           .    ....+++.++. .+..++|...+
T Consensus        78 ~~~~~~~ad~Vi~~~~~~-----------~----~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           78 KECGMEKADMVFAFTNDD-----------S----TNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             HTTTGGGCSEEEECSSCH-----------H----HHHHHHHHHHHTSCCSEEEEECS
T ss_pred             HHcCcccCCEEEEEeCCc-----------H----HHHHHHHHHHHHCCCCeEEEEEC
Confidence            765 78899999997631           1    23445556666 56666666543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.51  E-value=3.1e-07  Score=98.59  Aligned_cols=108  Identities=17%  Similarity=0.203  Sum_probs=78.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|| |++|+.+++.|++. |++|++++|+.++.+.+.+.                  .++.++.+|+.|.++
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~------------------~~~~~~~~D~~d~~~   81 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP------------------SGSKAISLDVTDDSA   81 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG------------------GTCEEEECCTTCHHH
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh------------------cCCcEEEEecCCHHH
Confidence            45678999997 99999999999998 79999999998877765321                  246778899999989


Q ss_pred             HHHHhCCCcEEEEcccCCCCcc-C-----CCCcchHhHH--HHHHHHHHHHHhcCC
Q 009648          157 IEPALGNASVVICCIGASEKEV-F-----DITGPYRIDF--QATKNLVDAATIAKV  204 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~-~-----~~~~~~~vNv--~gt~~Ll~aa~~~gv  204 (530)
                      +.++++++|+||||++...... .     .-..++++++  ....+++++|+++|+
T Consensus        82 l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv  137 (467)
T 2axq_A           82 LDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI  137 (467)
T ss_dssp             HHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC
Confidence            9999999999999998542100 0     0011122221  235778888888876

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.48  E-value=6.7e-07  Score=91.13  Aligned_cols=115  Identities=14%  Similarity=0.084  Sum_probs=80.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|+|+||+|++|..++..|+..|  ++|++++++.  .......+.+          . ....+++...+    ..+++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~----------~-~~~~~l~~~~~----t~d~~   63 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSH----------I-ETRATVKGYLG----PEQLP   63 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTT----------S-SSSCEEEEEES----GGGHH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhc----------c-CcCceEEEecC----CCCHH
Confidence            489999999999999999999988  7999999987  2222111111          1 11112332211    13477


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      ++++++|+||+++|............+..|+...+.+++.+.+.+.. +||++|-
T Consensus        64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            88999999999999765444444566889999999999999987544 6776654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.45  E-value=1.8e-06  Score=82.66  Aligned_cols=95  Identities=11%  Similarity=0.117  Sum_probs=73.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|+|+ |.+|+++++.|.++|++|++++|++++.+.+.+.                  .++.++.+|.+|.+.+.++
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~------------------~~~~~i~gd~~~~~~l~~a   61 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK------------------LKATIIHGDGSHKEILRDA   61 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH------------------SSSEEEESCTTSHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------------------cCCeEEEcCCCCHHHHHhc
Confidence            47999995 9999999999999999999999999877665321                  3578899999999988876


Q ss_pred             -hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh-cCCCEEEE
Q 009648          161 -LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIM  209 (530)
Q Consensus       161 -~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~-~gv~r~V~  209 (530)
                       ++++|+||.+.+..           ..|    ..++..+++ .+..++|-
T Consensus        62 ~i~~ad~vi~~~~~d-----------~~n----~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           62 EVSKNDVVVILTPRD-----------EVN----LFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             TCCTTCEEEECCSCH-----------HHH----HHHHHHHHHTSCCCEEEE
T ss_pred             CcccCCEEEEecCCc-----------HHH----HHHHHHHHHHcCCCeEEE
Confidence             78999999886531           222    334455555 56667664

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.39  E-value=4.4e-06  Score=74.43  Aligned_cols=74  Identities=24%  Similarity=0.197  Sum_probs=63.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+                   .++.++.+|.++.+.+.+
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-------------------~g~~~i~gd~~~~~~l~~   66 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-------------------RGVRAVLGNAANEEIMQL   66 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEESCTTSHHHHHH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------cCCCEEECCCCCHHHHHh
Confidence            467999995 999999999999999999999999987776542                   467889999999988876


Q ss_pred             H-hCCCcEEEEcccC
Q 009648          160 A-LGNASVVICCIGA  173 (530)
Q Consensus       160 a-~~~vD~VI~~Ag~  173 (530)
                      + +.++|+||.+.+.
T Consensus        67 a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A           67 AHLECAKWLILTIPN   81 (140)
T ss_dssp             TTGGGCSEEEECCSC
T ss_pred             cCcccCCEEEEECCC
Confidence            5 5789999999753

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.37  E-value=1e-06  Score=85.76  Aligned_cols=75  Identities=17%  Similarity=0.286  Sum_probs=55.4

Q ss_pred             CCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCC
Q 009648           79 DDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE  142 (530)
Q Consensus        79 ~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~  142 (530)
                      .+|+||||||                +|++|.+++++|+++|++|+++.|......                    ....
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------------------~~~~   61 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------------------EPHP   61 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------------------CCCT
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------------cCCC
Confidence            4689999999                999999999999999999999999753100                    0013


Q ss_pred             CeEEEEecCCCHh----hHHHHhCCCcEEEEcccCCC
Q 009648          143 MLELVECDLEKRV----QIEPALGNASVVICCIGASE  175 (530)
Q Consensus       143 ~v~~v~~Dl~d~~----sl~~a~~~vD~VI~~Ag~~~  175 (530)
                      ++.++  |+...+    .+.+.++++|++|||||..+
T Consensus        62 ~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           62 NLSIR--EITNTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             TEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             CeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence            55555  444443    34455678999999999654

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.28  E-value=2.9e-06  Score=82.33  Aligned_cols=180  Identities=11%  Similarity=0.085  Sum_probs=99.1

Q ss_pred             CCCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      +.+++||||||                +|+||.+++++|+++|++|++++|+.. +.                     ..
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------------------~~   63 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------------------TP   63 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------------------CC
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------------------cC
Confidence            46789999999                799999999999999999999988652 00                     01


Q ss_pred             CCeEEEEecCCCHhhHH----HHhCCCcEEEEcccCCCCccCCC-C-cc---------hHhHHHHHHHHHHHHHhc-CCC
Q 009648          142 EMLELVECDLEKRVQIE----PALGNASVVICCIGASEKEVFDI-T-GP---------YRIDFQATKNLVDAATIA-KVN  205 (530)
Q Consensus       142 ~~v~~v~~Dl~d~~sl~----~a~~~vD~VI~~Ag~~~~~~~~~-~-~~---------~~vNv~gt~~Ll~aa~~~-gv~  205 (530)
                      .+++  .+|+.+.+.+.    +.++++|++|||||......... . .+         +.+.+.-+..++..+.+. ..+
T Consensus        64 ~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~  141 (226)
T 1u7z_A           64 PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHR  141 (226)
T ss_dssp             TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSC
T ss_pred             CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCC
Confidence            2343  46888765543    34578999999999653221111 0 00         111122234456666554 223


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCH
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v  285 (530)
                      +|+ |+-..-.         +.+..|      +.+.+...|+.++++.+-...|-+-.........+...+.......+-
T Consensus       142 ~~~-VGFaaEt---------~~l~e~------A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~~~~~~~~~~~sK  205 (226)
T 1u7z_A          142 PYV-VGFAAET---------NNVEEY------ARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDGDKVLPLERK  205 (226)
T ss_dssp             CEE-EEEEEES---------SSHHHH------HHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEETTEEEEEEEEEH
T ss_pred             cEE-EEcchhh---------chHHHH------HHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEeCCCcEecCCCCH
Confidence            332 3321110         112223      333345689999998875422211100111122222222111123467


Q ss_pred             HHHHHHHHHHHh
Q 009648          286 LQVAELLACMAK  297 (530)
Q Consensus       286 ~DVA~ai~~ll~  297 (530)
                      ++||+.|+..+.
T Consensus       206 ~~vA~~I~~~i~  217 (226)
T 1u7z_A          206 ELLGQLLLDEIV  217 (226)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            889988887664

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.25  E-value=3.7e-06  Score=86.62  Aligned_cols=118  Identities=14%  Similarity=0.102  Sum_probs=81.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+++|.|+|++|+||..++..|+..|  .+|++++++.++++.....+.+.          .+...++.+       ..
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~----------~~~~~~i~~-------t~   68 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC----------GFEGLNLTF-------TS   68 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH----------CCTTCCCEE-------ES
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC----------cCCCCceEE-------cC
Confidence            446789999999999999999999998  59999999988776654444432          111122332       12


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE--EEEEcC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH--FIMVSS  212 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r--~V~iSS  212 (530)
                      +..++++++|+||.+||............+..|....+.+++.+.+.+.+-  +|.+|.
T Consensus        69 d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           69 DIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             CHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             CHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            466789999999999996544333334557889999999999999876543  455553

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.18  E-value=1.3e-05  Score=81.97  Aligned_cols=118  Identities=18%  Similarity=0.156  Sum_probs=83.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +..++|.|+|+ |++|..++..|+..|+  +|++++++.++++.....+.+. .+        .....+.+...|     
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~--------~~~~~v~i~~~~-----   67 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KA--------FAPQPVKTSYGT-----   67 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GG--------GSSSCCEEEEEC-----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cc--------cccCCeEEEeCc-----
Confidence            44679999995 9999999999999986  9999999988877654444432 00        011244554443     


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                        .++++++|+||.++|............+..|....+.+++.+.+.+.+ .++.+|.
T Consensus        68 --~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           68 --YEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             --GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             --HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence              246889999999999654433333445788999999999999887544 4555443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.18  E-value=9.1e-06  Score=82.74  Aligned_cols=82  Identities=15%  Similarity=0.152  Sum_probs=66.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC---chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~---~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ...+++|||+|+ |++|+.++..|++.|. +|+++.|+   .++.+.+.+++...              ..+.+...++.
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~--------------~~~~~~~~~~~  215 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK--------------TDCKAQLFDIE  215 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH--------------SSCEEEEEETT
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh--------------cCCceEEeccc
Confidence            356789999997 8999999999999998 99999999   77777777665543              12344456777


Q ss_pred             CHhhHHHHhCCCcEEEEcccC
Q 009648          153 KRVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~  173 (530)
                      +.+.+.+.+.++|+|||+...
T Consensus       216 ~~~~l~~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          216 DHEQLRKEIAESVIFTNATGV  236 (315)
T ss_dssp             CHHHHHHHHHTCSEEEECSST
T ss_pred             hHHHHHhhhcCCCEEEECccC
Confidence            877788889999999999753

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.17  E-value=6.7e-06  Score=79.43  Aligned_cols=72  Identities=18%  Similarity=0.139  Sum_probs=60.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++|+|+|+ |.+|+.+++.|.+.|+ |++++|++++.+.+.                    .++.++.+|.+|.+.+.
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------------------~~~~~i~gd~~~~~~l~   65 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------------------SGANFVHGDPTRVSDLE   65 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------------------TTCEEEESCTTCHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------------------cCCeEEEcCCCCHHHHH
Confidence            3568999996 9999999999999999 999999987665431                    25789999999999888


Q ss_pred             HH-hCCCcEEEEccc
Q 009648          159 PA-LGNASVVICCIG  172 (530)
Q Consensus       159 ~a-~~~vD~VI~~Ag  172 (530)
                      ++ ++++|+||.+.+
T Consensus        66 ~a~i~~ad~vi~~~~   80 (234)
T 2aef_A           66 KANVRGARAVIVDLE   80 (234)
T ss_dssp             HTTCTTCSEEEECCS
T ss_pred             hcCcchhcEEEEcCC
Confidence            77 899999999865

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.15  E-value=2.9e-06  Score=79.61  Aligned_cols=99  Identities=21%  Similarity=0.206  Sum_probs=66.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-  156 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.    ++         |      ... ..|+.+.+. 
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~---------g------~~~-~~d~~~~~~~   96 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL---------G------VEY-VGDSRSVDFA   96 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT---------C------CSE-EEETTCSTHH
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc---------C------CCE-EeeCCcHHHH
Confidence            35679999999999999999999999999999999887654432    11         1      111 246665433 


Q ss_pred             --HHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          157 --IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       157 --l~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        +.+..  +++|+||||+|..                ....+++.++..  ++||.+++..
T Consensus        97 ~~~~~~~~~~~~D~vi~~~g~~----------------~~~~~~~~l~~~--G~~v~~g~~~  140 (198)
T 1pqw_A           97 DEILELTDGYGVDVVLNSLAGE----------------AIQRGVQILAPG--GRFIELGKKD  140 (198)
T ss_dssp             HHHHHHTTTCCEEEEEECCCTH----------------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred             HHHHHHhCCCCCeEEEECCchH----------------HHHHHHHHhccC--CEEEEEcCCC
Confidence              33333  3699999998720                123344444433  4899988754

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.04  E-value=2.5e-05  Score=79.88  Aligned_cols=117  Identities=15%  Similarity=0.174  Sum_probs=73.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ...+++|.|+|+ |++|..++..|+..|.  +|+++++++++++.....+.+..          .....+.+...|    
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~----------~~~~~~~i~~~~----   70 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL----------PFTSPKKIYSAE----   70 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----------GGSCCCEEEECC----
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh----------hhcCCcEEEECc----
Confidence            355679999996 9999999999999886  99999999888776655444320          001244444333    


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                         .++++++|+||++||............++.|....+.+++.+.+.+.+ .++.+|
T Consensus        71 ---~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           71 ---YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ---GGGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             ---HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence               246889999999999754433334556788888899999999887544 444444

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.97  E-value=6.3e-06  Score=78.11  Aligned_cols=73  Identities=19%  Similarity=0.274  Sum_probs=53.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|+||+|++|+.+++.|++.|++|++++|+.++.+.+.+.+... +.          ...+.        ..++.++
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~----------~~~~~--------~~~~~~~   61 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI-AG----------DASIT--------GMKNEDA   61 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH-HS----------SCCEE--------EEEHHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-cc----------cCCCC--------hhhHHHH
Confidence            47999999999999999999999999999999988776654432211 00          01121        1245667


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||++..
T Consensus        62 ~~~~D~Vi~~~~   73 (212)
T 1jay_A           62 AEACDIAVLTIP   73 (212)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HhcCCEEEEeCC
Confidence            788999999975

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.97  E-value=3.5e-05  Score=81.33  Aligned_cols=95  Identities=22%  Similarity=0.202  Sum_probs=75.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|+|+|. |.+|+.+++.|.+.|++|+++++++++.+.+.+                   .++.++.||.++.+.+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-------------------~g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-------------------TTCCCEESCTTCHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEcCCCCHHHHHh
Confidence            457999995 999999999999999999999999988776542                   357789999999999887


Q ss_pred             H-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEE
Q 009648          160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIM  209 (530)
Q Consensus       160 a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~  209 (530)
                      + ++++|+||.+.+.               ......++..+++.+.. ++|-
T Consensus        64 agi~~A~~viv~~~~---------------~~~n~~i~~~ar~~~p~~~Iia  100 (413)
T 3l9w_A           64 AGAAKAEVLINAIDD---------------PQTNLQLTEMVKEHFPHLQIIA  100 (413)
T ss_dssp             TTTTTCSEEEECCSS---------------HHHHHHHHHHHHHHCTTCEEEE
T ss_pred             cCCCccCEEEECCCC---------------hHHHHHHHHHHHHhCCCCeEEE
Confidence            7 7899999999752               22345566677776654 4443

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.96  E-value=2.5e-05  Score=79.20  Aligned_cols=116  Identities=16%  Similarity=0.093  Sum_probs=75.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.+.....     +  ...++... .|      + +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~-----~--~~~~i~~t-~d------~-~   66 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIE-----G--FDVRVTGT-NN------Y-A   66 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHH-----T--CCCCEEEE-SC------G-G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhc-----C--CCeEEEEC-CC------H-H
Confidence            68999998 9999999999999996 99999999887765443333210000     0  01222221 22      3 4


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +++++|+||.++|...............|....+.+++.+.+.+...+|.+.|
T Consensus        67 a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  119 (309)
T 1ur5_A           67 DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  119 (309)
T ss_dssp             GGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred             HHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence            58899999999986543322223446777888889999998886666665555

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.95  E-value=3.7e-05  Score=75.51  Aligned_cols=106  Identities=15%  Similarity=0.271  Sum_probs=75.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      .+++|+|.| .|.+|+.+++.|++.|. +|++++++.                   .|.+.+.+.+.+..          
T Consensus        30 ~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n----------   98 (249)
T 1jw9_B           30 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN----------   98 (249)
T ss_dssp             HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC----------
T ss_pred             hCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC----------
Confidence            456899999 57899999999999996 999999987                   77777777666541          


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       +.-.++.+..++.+ +.+.+.++++|+||++...               ...-..+.++|.+.++ .+|+.+..
T Consensus        99 -p~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~---------------~~~~~~l~~~~~~~~~-p~i~~~~~  155 (249)
T 1jw9_B           99 -PHIAITPVNALLDD-AELAALIAEHDLVLDCTDN---------------VAVRNQLNAGCFAAKV-PLVSGAAI  155 (249)
T ss_dssp             -TTSEEEEECSCCCH-HHHHHHHHTSSEEEECCSS---------------HHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             -CCcEEEEEeccCCH-hHHHHHHhCCCEEEEeCCC---------------HHHHHHHHHHHHHcCC-CEEEeeec
Confidence             11234555555653 4567788999999999642               2233456677777775 56665443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.92  E-value=9.4e-05  Score=75.76  Aligned_cols=118  Identities=14%  Similarity=0.133  Sum_probs=84.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...++|.|+|+ |.+|..++..|+..|.  +|++++++.++++.....+.+..         .+. ....++..+  |. 
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~---------~~~-~~~~i~~~~--d~-   82 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS---------LFL-KTPKIVSSK--DY-   82 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG---------GGC-SCCEEEECS--SG-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh---------hcc-CCCeEEEcC--CH-
Confidence            45679999997 9999999999999986  99999999887777655554320         011 122233221  22 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                         +.++++|+||.+||........-...++.|....+.+++.+.+..-. .++.+|.
T Consensus        83 ---~~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN  137 (331)
T 4aj2_A           83 ---SVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN  137 (331)
T ss_dssp             ---GGGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ---HHhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence               25889999999999765544455677899999999999999987544 5555554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.92  E-value=1.7e-05  Score=82.39  Aligned_cols=105  Identities=15%  Similarity=0.161  Sum_probs=71.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |.||+.+++.|...|++|++++|+.++.+.+.+.   .         |    ..   +.+|+.+.+.+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~---~---------g----~~---~~~~~~~~~~l  223 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV---F---------G----GR---VITLTATEANI  223 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---T---------T----TS---EEEEECCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---c---------C----ce---EEEecCCHHHH
Confidence            45689999998 9999999999999999999999998776654321   1         1    11   44677778888


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      .++++++|+||+|++........         ......++.++. + ..||.+++.
T Consensus       224 ~~~~~~~DvVi~~~g~~~~~~~~---------li~~~~l~~mk~-g-g~iV~v~~~  268 (369)
T 2eez_A          224 KKSVQHADLLIGAVLVPGAKAPK---------LVTRDMLSLMKE-G-AVIVDVAVD  268 (369)
T ss_dssp             HHHHHHCSEEEECCC-------C---------CSCHHHHTTSCT-T-CEEEECC--
T ss_pred             HHHHhCCCEEEECCCCCccccch---------hHHHHHHHhhcC-C-CEEEEEecC
Confidence            89999999999999853210000         012334444432 3 479998865

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.91  E-value=2.4e-05  Score=80.13  Aligned_cols=118  Identities=13%  Similarity=0.037  Sum_probs=79.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.+.. . .   .+  ...++.+.       .+++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~-~-~---~~--~~~~i~~t-------~d~~   73 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVT-S-V---VD--TNVSVRAE-------YSYE   73 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHH-H-H---TT--CCCCEEEE-------CSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhh-h-c---cC--CCCEEEEe-------CCHH
Confidence            468999997 9999999999999998 99999999987776433333210 0 0   00  11233321       2355


Q ss_pred             HHhCCCcEEEEcccCCCCccC-----CCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~-----~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ++++++|+||.++|.......     ........|....+.+++.+.+..-.-+|.+.|
T Consensus        74 ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           74 AALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             HHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            678999999999986543222     233446677888888888888775444444444

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.91  E-value=5.6e-05  Score=76.92  Aligned_cols=119  Identities=13%  Similarity=0.087  Sum_probs=80.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC--chhHHHHHHHHHHhh-hhccccccCCCCCCCeEEEEecCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS--VQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~--~~k~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ++..++|.|+|+ |.+|..++..|+..|+ +|++++++  +.+.+.....+.+.. +.+        ...++..- .|  
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~--------~~~~i~~t-~d--   72 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQG--------FDANIIGT-SD--   72 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT--------CCCCEEEE-SC--
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc--------CCCEEEEc-CC--
Confidence            345679999996 9999999999999999 99999998  555555443333210 000        01222221 12  


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                           .++++++|+||.++|............+..|....+.+++.+.+.+.. .||.+|.
T Consensus        73 -----~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           73 -----YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             -----GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -----HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence                 246889999999999765443344456788999999999999887544 4555553

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.91  E-value=1.5e-05  Score=79.25  Aligned_cols=75  Identities=20%  Similarity=0.274  Sum_probs=55.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |++|+.++..|++.|++|+++.|+.++.+.+.+.+...              ..+.  ..|+   +.+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--------------~~~~--~~~~---~~~  176 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQ--ALSM---DEL  176 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEE--ECCS---GGG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--------------CCee--EecH---HHh
Confidence            45789999998 78999999999999999999999998877765433211              1222  1333   222


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      .+  +++|+||||++..
T Consensus       177 ~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          177 EG--HEFDLIINATSSG  191 (271)
T ss_dssp             TT--CCCSEEEECCSCG
T ss_pred             cc--CCCCEEEECCCCC
Confidence            22  6899999999854

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.89  E-value=5.4e-05  Score=76.91  Aligned_cols=81  Identities=15%  Similarity=0.154  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC---chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~---~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+++|||+|+ |++|+.++..|++.|. +|+++.|+   .++.+.+.+++...              .+..+...++.+
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~--------------~~~~v~~~~~~~  210 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN--------------TDCVVTVTDLAD  210 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH--------------SSCEEEEEETTC
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc--------------cCcceEEechHh
Confidence            56789999996 8999999999999997 89999999   77777776655432              123344456666


Q ss_pred             HhhHHHHhCCCcEEEEcccC
Q 009648          154 RVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~  173 (530)
                      .+.+.+.+.++|+|||+...
T Consensus       211 l~~~~~~l~~~DiIINaTp~  230 (312)
T 3t4e_A          211 QHAFTEALASADILTNGTKV  230 (312)
T ss_dssp             HHHHHHHHHHCSEEEECSST
T ss_pred             hhhhHhhccCceEEEECCcC
Confidence            54456677889999999764

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.88  E-value=2.5e-05  Score=79.44  Aligned_cols=75  Identities=23%  Similarity=0.279  Sum_probs=54.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.    ++         |      .. ..+|+.+.+++
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~---------g------~~-~~~d~~~~~~~  203 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QI---------G------FD-AAFNYKTVNSL  203 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT---------T------CS-EEEETTSCSCH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hc---------C------Cc-EEEecCCHHHH
Confidence            45789999999999999999999999999999999887665542    11         1      11 12476652333


Q ss_pred             HHHh-----CCCcEEEEccc
Q 009648          158 EPAL-----GNASVVICCIG  172 (530)
Q Consensus       158 ~~a~-----~~vD~VI~~Ag  172 (530)
                      .+.+     +++|+||||+|
T Consensus       204 ~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          204 EEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             HHHHHHHCTTCEEEEEESSC
T ss_pred             HHHHHHHhCCCCeEEEECCC
Confidence            3222     36999999998

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.88  E-value=2e-05  Score=80.58  Aligned_cols=118  Identities=14%  Similarity=0.065  Sum_probs=79.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.....+.+.....     +  ...++.. ..|      .
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~-----~--~~~~v~~-t~d------~   70 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVD-----G--FDAKFTG-AND------Y   70 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHH-----T--CCCCEEE-ESS------G
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhc-----C--CCCEEEE-eCC------H
Confidence            4578999997 9999999999999998 99999999988765444443321000     0  0122221 122      2


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                       ++++++|+||.++|............+..|....+.+++.+.+.+.. .||.+|.
T Consensus        71 -~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN  125 (324)
T 3gvi_A           71 -AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN  125 (324)
T ss_dssp             -GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             -HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence             57889999999999654433334456788999999999999887544 5555553

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.87  E-value=0.00011  Score=74.71  Aligned_cols=117  Identities=16%  Similarity=0.188  Sum_probs=79.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|.|+|| |.+|..++..|+..|  .+|.++++++++++.....+.+. .+        .....+++.. |  +   
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~--------~~~~~~~v~~-~--~---   68 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TP--------YSPTTVRVKA-G--E---   68 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GG--------GSSSCCEEEE-C--C---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hh--------hcCCCeEEEe-C--C---
Confidence            4579999998 999999999999888  58999999887766543333322 00        0012334432 2  2   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                       .++++++|+||.++|............+..|....+.+++.+.+.+..-+|.+.|
T Consensus        69 -~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           69 -YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             -GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence             4568899999999997544333333456778888888999888875554444444

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.87  E-value=4e-05  Score=76.83  Aligned_cols=80  Identities=20%  Similarity=0.254  Sum_probs=61.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+++|+|+|+ |++|+.++..|++.|. +|+++.|+.++.+.+.+.+....             ..+.+...++.   
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~-------------~~~~i~~~~~~---  186 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-------------GREAVVGVDAR---  186 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH-------------TSCCEEEECST---
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc-------------CCceEEEcCHH---
Confidence            356789999997 8999999999999998 79999999999888877665431             22334444543   


Q ss_pred             hHHHHhCCCcEEEEcccC
Q 009648          156 QIEPALGNASVVICCIGA  173 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~  173 (530)
                      ++.+++.++|+|||+...
T Consensus       187 ~l~~~l~~~DiVInaTp~  204 (283)
T 3jyo_A          187 GIEDVIAAADGVVNATPM  204 (283)
T ss_dssp             THHHHHHHSSEEEECSST
T ss_pred             HHHHHHhcCCEEEECCCC
Confidence            356677889999999853

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.87  E-value=0.00021  Score=72.63  Aligned_cols=117  Identities=15%  Similarity=0.174  Sum_probs=78.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.++|.|+|+ |.+|..++..|+..|  .+|+++++++++.+.....+.+.         .......+.+.. |  +  
T Consensus         4 ~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~---------~~~~~~~~~i~~-~--~--   68 (316)
T 1ldn_A            4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---------KVFAPKPVDIWH-G--D--   68 (316)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---------TTSSSSCCEEEE-C--C--
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH---------hhhcCCCeEEEc-C--c--
Confidence            34579999998 999999999998877  48999999987665543333321         001112344442 2  2  


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                        .++++++|+||.++|............+..|....+.+++.+.+.... .++.+|
T Consensus        69 --~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t  123 (316)
T 1ldn_A           69 --YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (316)
T ss_dssp             --GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             --HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence              246889999999998654433333455677888888888888877544 344433

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.85  E-value=3.3e-05  Score=79.08  Aligned_cols=100  Identities=22%  Similarity=0.219  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+    +         |      ... ..|+.+.+++
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~---------g------~~~-~~d~~~~~~~  227 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----I---------G------GEV-FIDFTKEKDI  227 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----T---------T------CCE-EEETTTCSCH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----c---------C------Cce-EEecCccHhH
Confidence            457899999999999999999999999999999999877654321    1         1      111 2476643334


Q ss_pred             HHHh-----CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          158 EPAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       158 ~~a~-----~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      .+.+     +++|+||+++|..               .....+++.++..  ++||.+++..
T Consensus       228 ~~~~~~~~~~~~D~vi~~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~~  272 (347)
T 2hcy_A          228 VGAVLKATDGGAHGVINVSVSE---------------AAIEASTRYVRAN--GTTVLVGMPA  272 (347)
T ss_dssp             HHHHHHHHTSCEEEEEECSSCH---------------HHHHHHTTSEEEE--EEEEECCCCT
T ss_pred             HHHHHHHhCCCCCEEEECCCcH---------------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            3333     2699999999731               1223333333333  4899887643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.85  E-value=9.5e-05  Score=74.51  Aligned_cols=116  Identities=13%  Similarity=0.062  Sum_probs=79.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++++++.....+.+...       . . .....+...+  |    .
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~-------~-~-~~~~~i~~t~--d----~   64 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-------G-I-DKYPKIVGGA--D----Y   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-------T-T-TCCCEEEEES--C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhh-------h-c-CCCCEEEEeC--C----H
Confidence            58999998 9999999999999997  999999999876643333332210       0 0 1122332221  2    4


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      ++++++|+||.++|............+..|....+.+++.+.+.+.. .||.+|.
T Consensus        65 ~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            57889999999999754433333455788888899999999987544 4555553

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.84  E-value=0.00013  Score=74.17  Aligned_cols=116  Identities=12%  Similarity=0.138  Sum_probs=77.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|.|+|| |.+|..++..|+..+.  +|++++++.++++.....+.+..        . . ...+.+.. |  +  
T Consensus         3 ~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~--------~-~-~~~~~v~~-~--~--   66 (318)
T 1ez4_A            3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ--------A-F-TAPKKIYS-G--E--   66 (318)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG--------G-G-SCCCEEEE-C--C--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH--------H-h-cCCeEEEE-C--C--
Confidence            44579999998 9999999999998875  89999999887776554444320        0 0 13344442 2  2  


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                        .++++++|+||.++|........-...+..|....+.+++.+.+.+.. .||.+|
T Consensus        67 --~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           67 --YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             --GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence              455889999999999654433333456788899999999999888544 445443

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.82  E-value=0.0003  Score=71.91  Aligned_cols=116  Identities=12%  Similarity=0.055  Sum_probs=82.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~  155 (530)
                      ..++|.|+|+ |.+|..++..|+..|.  +|+++++++++.+.....+.+..         .+. ....++ ..|+.   
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~---------~~~-~~~~i~~t~d~~---   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGS---------LFL-HTAKIVSGKDYS---   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHG---------GGS-CCSEEEEESSSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhh---------hcc-cCCeEEEcCCHH---
Confidence            4578999998 9999999999999986  99999999887776554444320         011 122222 23432   


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                          .++++|+||.+||........-...+..|....+.+++.+.+.+.. .++.+|.
T Consensus        86 ----~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           86 ----VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             ----SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ----HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence                2789999999999765554455667889999999999999887544 4555553

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.82  E-value=1.1e-05  Score=72.01  Aligned_cols=71  Identities=17%  Similarity=0.278  Sum_probs=54.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++|+.++.+.+.+.+                  ++.+.  +.   +++.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~------------------~~~~~--~~---~~~~~   76 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY------------------EYEYV--LI---NDIDS   76 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH------------------TCEEE--EC---SCHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh------------------CCceE--ee---cCHHH
Confidence            679999995 99999999999999999999999998877654422                  11221  22   23566


Q ss_pred             HhCCCcEEEEcccCC
Q 009648          160 ALGNASVVICCIGAS  174 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~  174 (530)
                      +++++|+||++.+..
T Consensus        77 ~~~~~Divi~at~~~   91 (144)
T 3oj0_A           77 LIKNNDVIITATSSK   91 (144)
T ss_dssp             HHHTCSEEEECSCCS
T ss_pred             HhcCCCEEEEeCCCC
Confidence            778999999998754

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.79  E-value=6.7e-05  Score=76.49  Aligned_cols=93  Identities=15%  Similarity=0.114  Sum_probs=72.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .++|+|.|+ |.+|+.+++.|.++|+ |+++++++++.+ +.+                   .++.++.||.+|.+.+++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------------------~~~~~i~gd~~~~~~L~~  172 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------------------SGANFVHGDPTRVSDLEK  172 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------------------TTCEEEESCTTSHHHHHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------------------CCcEEEEeCCCCHHHHHh
Confidence            468999995 9999999999999999 999999998776 432                   468899999999999988


Q ss_pred             H-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEE
Q 009648          160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIM  209 (530)
Q Consensus       160 a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~  209 (530)
                      + ++++|+||.+.+.               -.....++..+++.+.+ ++|-
T Consensus       173 a~i~~a~~vi~~~~~---------------d~~n~~~~~~ar~~~~~~~iia  209 (336)
T 1lnq_A          173 ANVRGARAVIVDLES---------------DSETIHCILGIRKIDESVRIIA  209 (336)
T ss_dssp             TCSTTEEEEEECCSS---------------HHHHHHHHHHHHTTCTTSEEEE
T ss_pred             cChhhccEEEEcCCc---------------cHHHHHHHHHHHHHCCCCeEEE
Confidence            7 8899999998642               12234455666776665 4443

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.79  E-value=2.6e-05  Score=79.00  Aligned_cols=99  Identities=16%  Similarity=0.205  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-  156 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |    .. .  ..|..+.+. 
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~---------g----~~-~--~~~~~~~~~~  198 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----A---------G----AW-Q--VINYREEDLV  198 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T----CS-E--EEETTTSCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------C----CC-E--EEECCCccHH
Confidence            457899999999999999999999999999999999877665432    1         1    11 1  246655433 


Q ss_pred             --HHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          157 --IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       157 --l~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        +.+..  +++|+||+|+|. .               ....+++.++..  ++||.+++..
T Consensus       199 ~~~~~~~~~~~~D~vi~~~g~-~---------------~~~~~~~~l~~~--G~iv~~g~~~  242 (327)
T 1qor_A          199 ERLKEITGGKKVRVVYDSVGR-D---------------TWERSLDCLQRR--GLMVSFGNSS  242 (327)
T ss_dssp             HHHHHHTTTCCEEEEEECSCG-G---------------GHHHHHHTEEEE--EEEEECCCTT
T ss_pred             HHHHHHhCCCCceEEEECCch-H---------------HHHHHHHHhcCC--CEEEEEecCC
Confidence              33333  269999999982 1               123334444333  4899888653

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.78  E-value=0.00011  Score=75.09  Aligned_cols=116  Identities=14%  Similarity=0.074  Sum_probs=79.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++|.|+| +|.+|..++..|+..|. +|+++++++++.+.....+.+....         ......+...+  |    .
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~---------~~~~~~v~~t~--d----~   68 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI---------EGVDFKVRGTN--D----Y   68 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH---------HTCCCCEEEES--C----G
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh---------cCCCcEEEEcC--C----H
Confidence            56899999 59999999999999988 9999999998876554444332100         00122222111  2    2


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++++|+||.++|............+..|....+.+++.+.+.+.. .||.+|
T Consensus        69 ~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           69 KDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            57889999999999654433333345778899999999999887644 555554

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.77  E-value=2.6e-05  Score=78.07  Aligned_cols=80  Identities=18%  Similarity=0.209  Sum_probs=57.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|++ .+|+.+++.|++.| +|++++|+.++.+.+.+.+....        +    ... .+.+|+.+   +
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~--------~----~~~-~~~~d~~~---~  187 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL--------N----KKF-GEEVKFSG---L  187 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH--------T----CCH-HHHEEEEC---T
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc--------c----ccc-ceeEEEee---H
Confidence            467899999985 99999999999999 99999999988877766554320        0    000 01123333   1


Q ss_pred             HHHhCCCcEEEEcccCCC
Q 009648          158 EPALGNASVVICCIGASE  175 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~  175 (530)
                      .+.++++|+||||+|...
T Consensus       188 ~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          188 DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             TCCCTTCCEEEECSCTTC
T ss_pred             HHhhCCCCEEEECCCCCC
Confidence            445678999999998643

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.76  E-value=0.00011  Score=74.74  Aligned_cols=116  Identities=10%  Similarity=0.034  Sum_probs=77.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|+ |.+|..++..|+..|.  +|+++++++++.+.....+.+....         ....+.+...|  +    .
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~---------~~~~~~v~~~~--~----~   64 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI---------HGFDTRVTGTN--D----Y   64 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH---------HTCCCEEEEES--S----S
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc---------cCCCcEEEECC--C----H
Confidence            58999996 9999999999999886  9999999998776554444432100         00123333222  1    3


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      ++++++|+||.++|............+..|....+.+++.+.+.+.. .||.+|.
T Consensus        65 ~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           65 GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            56889999999999754433344556788999999999999987544 4555443

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.75  E-value=5.4e-05  Score=77.80  Aligned_cols=75  Identities=17%  Similarity=0.267  Sum_probs=55.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.    ++         |      .. ...|..+.+  
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~---------g------a~-~~~d~~~~~~~  228 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QN---------G------AH-EVFNHREVNYI  228 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT---------T------CS-EEEETTSTTHH
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH----Hc---------C------CC-EEEeCCCchHH
Confidence            45789999999999999999999999999999999987766432    11         1      11 124665543  


Q ss_pred             -hHHHHhC--CCcEEEEccc
Q 009648          156 -QIEPALG--NASVVICCIG  172 (530)
Q Consensus       156 -sl~~a~~--~vD~VI~~Ag  172 (530)
                       .+.+...  ++|+||+|+|
T Consensus       229 ~~~~~~~~~~~~D~vi~~~G  248 (351)
T 1yb5_A          229 DKIKKYVGEKGIDIIIEMLA  248 (351)
T ss_dssp             HHHHHHHCTTCEEEEEESCH
T ss_pred             HHHHHHcCCCCcEEEEECCC
Confidence             2334443  6999999997

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.74  E-value=5.3e-05  Score=77.30  Aligned_cols=117  Identities=11%  Similarity=0.028  Sum_probs=76.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.+..-..     +  ...++... .|      +
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~-----~--~~~~i~~t-~d------~   67 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMA-----Y--SNCKVSGS-NT------Y   67 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHH-----T--CCCCEEEE-CC------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhc-----C--CCcEEEEC-CC------H
Confidence            3568999998 9999999999999998 99999999888776544443321000     0  01223221 22      3


Q ss_pred             HHHhCCCcEEEEcccCCCCccCC-----CCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          158 EPALGNASVVICCIGASEKEVFD-----ITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~-----~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                       ++++++|+||.++|........     .......|....+.+++.+.+..-. .||.+|
T Consensus        68 -~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  126 (322)
T 1t2d_A           68 -DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  126 (322)
T ss_dssp             -GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             -HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             5688999999999864332211     2334666777788888888776433 444443

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.73  E-value=0.00011  Score=74.79  Aligned_cols=116  Identities=14%  Similarity=0.097  Sum_probs=72.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|.|+|+ |++|..++..|+..|.  +|+++++++++++.....+.+          +......+.+..   .+   
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~----------~~~~~~~~~i~~---~~---   68 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH----------GLPFMGQMSLYA---GD---   68 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT----------SCCCTTCEEEC-----C---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH----------hHHhcCCeEEEE---CC---
Confidence            3568999998 9999999999999987  999999998766543332221          100112333332   12   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                       .++++++|+||.++|............+..|+...+.+++.+.+.+.+-+|.+.|
T Consensus        69 -~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           69 -YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             -GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             -HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence             3458999999999986543222223456788888899999998865444444444

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.73  E-value=0.00028  Score=71.28  Aligned_cols=112  Identities=21%  Similarity=0.161  Sum_probs=69.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++++++.....+.+          +......+.+...   +    .
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~----------~~~~~~~~~i~~~---~----~   62 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAH----------AAPVSHGTRVWHG---G----H   62 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTT----------SCCTTSCCEEEEE---C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhh----------hhhhcCCeEEEEC---C----H
Confidence            47999998 9999999999999998  999999998766543322211          1000122333322   2    2


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                      ++++++|+||.+++............+..|....+.+++.+.+.....+|.+
T Consensus        63 ~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~  114 (304)
T 2v6b_A           63 SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV  114 (304)
T ss_dssp             GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE
Confidence            4688999999999854432233344567888888999998887654434333

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.72  E-value=0.00021  Score=71.95  Aligned_cols=116  Identities=13%  Similarity=0.028  Sum_probs=82.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|| |+||..++..|+.+|  .++.+++.++.+.+.....+.+..-         .......++..+  |.    
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~---------~~~~~~~i~~~~--d~----   64 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA---------GIDKYPKIVGGA--DY----   64 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG---------GGTCCCEEEEES--CG----
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc---------cCCCCCeEecCC--CH----
Confidence            68999995 999999999998887  5899999998776665544443210         001122333222  22    


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ++++++|+||..||...+........++.|..-.+.+++++.+++.+-+|.+=|
T Consensus        65 ~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            357899999999997766555556778999999999999999886554544433

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.69  E-value=4.4e-05  Score=77.58  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=55.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+    +         |    .. .  ..|..+.+  
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~---------g----~~-~--~~d~~~~~~~  203 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----L---------G----CH-H--TINYSTQDFA  203 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T----CS-E--EEETTTSCHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C----CC-E--EEECCCHHHH
Confidence            456899999999999999999999999999999999877665432    2         1    11 1  23665533  


Q ss_pred             -hHHHHh--CCCcEEEEcccC
Q 009648          156 -QIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~--~~vD~VI~~Ag~  173 (530)
                       .+.+..  .++|+||+|+|.
T Consensus       204 ~~i~~~~~~~~~d~vi~~~g~  224 (333)
T 1wly_A          204 EVVREITGGKGVDVVYDSIGK  224 (333)
T ss_dssp             HHHHHHHTTCCEEEEEECSCT
T ss_pred             HHHHHHhCCCCCeEEEECCcH
Confidence             233333  369999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.69  E-value=5.4e-05  Score=77.79  Aligned_cols=76  Identities=12%  Similarity=0.195  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |    .. .  ..|..+.+  
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g----~~-~--~~~~~~~~~~  220 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEK----L---------G----AA-A--GFNYKKEDFS  220 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----H---------T----CS-E--EEETTTSCHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------C----Cc-E--EEecCChHHH
Confidence            457899999999999999999999999999999999877665421    2         1    11 1  24555433  


Q ss_pred             -hHHHHh--CCCcEEEEcccC
Q 009648          156 -QIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~--~~vD~VI~~Ag~  173 (530)
                       .+.+..  +++|+||+|+|.
T Consensus       221 ~~~~~~~~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          221 EATLKFTKGAGVNLILDCIGG  241 (354)
T ss_dssp             HHHHHHTTTSCEEEEEESSCG
T ss_pred             HHHHHHhcCCCceEEEECCCc
Confidence             333444  369999999984

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.67  E-value=4.9e-05  Score=77.48  Aligned_cols=76  Identities=16%  Similarity=0.274  Sum_probs=54.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-  156 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+   ++         |    .. .+  .|+.+.++ 
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~---------g----~~-~~--~d~~~~~~~  214 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KF---------G----FD-DA--FNYKEESDL  214 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TS---------C----CS-EE--EETTSCSCS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc---------C----Cc-eE--EecCCHHHH
Confidence            457899999999999999999999999999999999877665431   11         1    11 12  36554322 


Q ss_pred             ---HHHHh-CCCcEEEEccc
Q 009648          157 ---IEPAL-GNASVVICCIG  172 (530)
Q Consensus       157 ---l~~a~-~~vD~VI~~Ag  172 (530)
                         +.+.. +++|+||+|+|
T Consensus       215 ~~~~~~~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          215 TAALKRCFPNGIDIYFENVG  234 (345)
T ss_dssp             HHHHHHHCTTCEEEEEESSC
T ss_pred             HHHHHHHhCCCCcEEEECCC
Confidence               33332 36999999987

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.67  E-value=0.00022  Score=72.36  Aligned_cols=115  Identities=17%  Similarity=0.165  Sum_probs=77.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-C--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-G--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+|.|+||+|+||..++..|..+ +  .+++++++++ +.......+.+.             ...+.+... ..  ...
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~-------------~~~~~v~~~-~~--~~~   63 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-------------PTAVKIKGF-SG--EDA   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS-------------CSSEEEEEE-CS--SCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC-------------CCCceEEEe-cC--CCc
Confidence            58999999999999999988875 5  5899999887 443322222211             012333221 01  113


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      .++++++|+||.+||........-...++.|....+.+++++.+.+.+ .|+.+|.
T Consensus        64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            567889999999999765544444566888999999999999887544 5555553

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.66  E-value=5.5e-05  Score=76.25  Aligned_cols=76  Identities=22%  Similarity=0.243  Sum_probs=57.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.++..|++.|+ +|+++.|+.++.+.+.+.+.            ..  ..      ++.+.++
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~------------~~--~~------~~~~~~~  197 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD------------ER--RS------AYFSLAE  197 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSC------------SS--SC------CEECHHH
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhh------------hc--cC------ceeeHHH
Confidence            45789999996 8899999999999997 99999999988777654221            00  00      1113345


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.++++++|+||||.+..
T Consensus       198 ~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          198 AETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             HHHTGGGCSEEEECSCTT
T ss_pred             HHhhhccCCEEEECCCCC
Confidence            777888999999999754

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.66  E-value=8.1e-05  Score=75.52  Aligned_cols=119  Identities=11%  Similarity=0.025  Sum_probs=74.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+.++|.|+|+ |.+|..++..|+..|+ +|+++++++++++.....+......     .+  ...++... .   |   
T Consensus         2 ~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~-----~~--~~~~i~~t-~---d---   66 (317)
T 2ewd_A            2 IERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVM-----FG--STSKVIGT-D---D---   66 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-----HT--CCCCEEEE-S---C---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhh-----cC--CCcEEEEC-C---C---
Confidence            34578999997 9999999999999998 9999999987766542222211000     00  01223221 2   2   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      + ++++++|+||.++|..............-|....+.+++.+.+..-. .+|.+|.
T Consensus        67 ~-~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           67 Y-ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             G-GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             H-HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3 46789999999998654332222333455666677777777765333 3444443

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.65  E-value=7.4e-05  Score=75.94  Aligned_cols=77  Identities=21%  Similarity=0.287  Sum_probs=55.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-  156 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+   ++         |      ... ..|..+.+. 
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~---------g------~~~-~~~~~~~~~~  208 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---EL---------G------FDG-AIDYKNEDLA  208 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TT---------C------CSE-EEETTTSCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc---------C------CCE-EEECCCHHHH
Confidence            457899999999999999999999999999999999887665522   11         1      111 135554332 


Q ss_pred             --HHHHh-CCCcEEEEcccC
Q 009648          157 --IEPAL-GNASVVICCIGA  173 (530)
Q Consensus       157 --l~~a~-~~vD~VI~~Ag~  173 (530)
                        +.+.. +++|+||+|+|.
T Consensus       209 ~~~~~~~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          209 AGLKRECPKGIDVFFDNVGG  228 (336)
T ss_dssp             HHHHHHCTTCEEEEEESSCH
T ss_pred             HHHHHhcCCCceEEEECCCc
Confidence              33332 469999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.65  E-value=5.6e-05  Score=77.59  Aligned_cols=97  Identities=19%  Similarity=0.275  Sum_probs=64.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh---h
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---Q  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~---s  156 (530)
                      ++|||+||+|.||..+++.+...|+ +|++++|+.++.+.+.+.   +         |      .. ..+|..+.+   .
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~---------g------~~-~~~d~~~~~~~~~  222 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---L---------G------FD-AAINYKKDNVAEQ  222 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---S---------C------CS-EEEETTTSCHHHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---c---------C------Cc-eEEecCchHHHHH
Confidence            8999999999999999999999999 999999998766654321   1         1      11 124665532   2


Q ss_pred             HHHHhC-CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          157 IEPALG-NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       157 l~~a~~-~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +.+... ++|+||+|+|.                ......++.++..  ++||.++...
T Consensus       223 ~~~~~~~~~d~vi~~~G~----------------~~~~~~~~~l~~~--G~iv~~G~~~  263 (357)
T 2zb4_A          223 LRESCPAGVDVYFDNVGG----------------NISDTVISQMNEN--SHIILCGQIS  263 (357)
T ss_dssp             HHHHCTTCEEEEEESCCH----------------HHHHHHHHTEEEE--EEEEECCCGG
T ss_pred             HHHhcCCCCCEEEECCCH----------------HHHHHHHHHhccC--cEEEEECCcc
Confidence            333332 69999999982                1123334444333  4899887653

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.64  E-value=0.00031  Score=70.66  Aligned_cols=107  Identities=14%  Similarity=0.232  Sum_probs=75.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ....+|+|.| .|++|+.++..|++.| -++++++++.                  .|.+.+.++++++.          
T Consensus        34 L~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN----------  102 (292)
T 3h8v_A           34 IRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN----------  102 (292)
T ss_dssp             GGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC----------
T ss_pred             HhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC----------
Confidence            4567899999 6779999999999999 5889888876                  56677766666551          


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHh-----------CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEE
Q 009648          139 QPVEMLELVECDLEKRVQIEPAL-----------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF  207 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~-----------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~  207 (530)
                       +.-+++.+..++++.+.+...+           +++|+||+|..               |+..-..+-++|.+.++ .+
T Consensus       103 -P~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------------n~~~R~~in~~c~~~~~-Pl  165 (292)
T 3h8v_A          103 -PDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD---------------NFEARMTINTACNELGQ-TW  165 (292)
T ss_dssp             -TTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------------SHHHHHHHHHHHHHHTC-CE
T ss_pred             -CCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc---------------chhhhhHHHHHHHHhCC-CE
Confidence             1234555666777655565554           68999998852               23333456677888776 67


Q ss_pred             EEEcC
Q 009648          208 IMVSS  212 (530)
Q Consensus       208 V~iSS  212 (530)
                      |+.+.
T Consensus       166 i~~gv  170 (292)
T 3h8v_A          166 MESGV  170 (292)
T ss_dssp             EEEEE
T ss_pred             EEeee
Confidence            76544

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.61  E-value=0.00013  Score=75.38  Aligned_cols=77  Identities=22%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |.+|+.+++.|...|++|++++|+.++.+.+.+...                ..+..+   ..+.+.+
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~---~~~~~~~  224 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEI  224 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----------------ceeEee---eCCHHHH
Confidence            34589999998 999999999999999999999999988776643211                112222   2244567


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      .+.+.++|+|||+++..
T Consensus       225 ~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          225 ETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             HHHHHTCSEEEECCCCT
T ss_pred             HHHHcCCCEEEECCCcC
Confidence            77888999999999753

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.61  E-value=0.00032  Score=71.65  Aligned_cols=116  Identities=16%  Similarity=0.164  Sum_probs=77.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|.|+|| |.+|..++..|+..+.  +|++++++.++++.....+.+..          .....+.+.. |  +  
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----------~~~~~~~i~~-~--~--   70 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----------PFTSPKKIYS-A--E--   70 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----------GGSCCCEEEE-C--C--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----------HhcCCeEEEE-C--C--
Confidence            34579999998 9999999999988875  89999999887766544443220          0013444443 2  2  


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                        .++++++|+||.++|........-...+..|+...+.+++.+.+.+.. .||.+|
T Consensus        71 --~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           71 --YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             --GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             --HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence              445889999999998654433333345677888888999988877544 455543

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.60  E-value=0.00013  Score=74.48  Aligned_cols=116  Identities=15%  Similarity=0.086  Sum_probs=75.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+.+..-.  .   .  ...++... .|      + 
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~--~---~--~~~~i~~t-~d------~-   77 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMAL--I---G--SPAKIFGE-NN------Y-   77 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHH--H---T--CCCCEEEE-SC------G-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhc--c---C--CCCEEEEC-CC------H-
Confidence            468999997 9999999999999998 9999999988777543333322100  0   0  01233322 22      3 


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++++|+||.++|...............|....+.+++.+.+.... .||++|
T Consensus        78 ~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  131 (328)
T 2hjr_A           78 EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICIT  131 (328)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEec
Confidence            56889999999998543322222234566778888888888776434 344444

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.58  E-value=0.00079  Score=69.24  Aligned_cols=119  Identities=13%  Similarity=0.122  Sum_probs=79.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      +..-||.|+||+|+||..|+-.|+....       ++.+++.++.  +++.+.-.+...          .+ .....++.
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~----------~~-~~~~~~~~   90 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC----------AF-PLLDKVVV   90 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------TC-TTEEEEEE
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc----------Cc-cCCCcEEE
Confidence            3445899999999999999988876542       7888887653  233333233321          01 11222222


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEcC
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS  212 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iSS  212 (530)
                      ++     ...++++++|+||-+||...+....-...++.|..-.+.+++++.+.. -. .++.+|.
T Consensus        91 ~~-----~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           91 TA-----DPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             ES-----CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cC-----ChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            22     246789999999999998766555556678999999999999988753 22 4555554

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.56  E-value=0.00069  Score=68.31  Aligned_cols=115  Identities=15%  Similarity=0.082  Sum_probs=75.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+| +|.+|..++..|++.|  ++|++++|+.++.+.+...+.... .        .....+.+...   |   . 
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~--------~~~~~~~~~~~---d---~-   64 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-A--------NLEAHGNIVIN---D---W-   64 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-G--------GSSSCCEEEES---C---G-
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-h--------hcCCCeEEEeC---C---H-
Confidence            5899999 8999999999999999  899999999887776654433210 0        00112333322   2   2 


Q ss_pred             HHhCCCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALGNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ++++++|+||.+++....    ...........|......+++.+.+.....+|.+.|
T Consensus        65 ~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            457899999999986432    112223456678888888888887764443433333

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.55  E-value=0.00036  Score=68.57  Aligned_cols=107  Identities=18%  Similarity=0.245  Sum_probs=72.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ..+.+|+|.|+ |++|+++++.|++.|. ++++++++.                   .|.+.+.+.++++.         
T Consensus        26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n---------   95 (251)
T 1zud_1           26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN---------   95 (251)
T ss_dssp             HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC---------
T ss_pred             HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC---------
Confidence            34568999996 6699999999999995 788886643                   56677766666541         


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                        ..-+++.+..++. .+.+.+.++++|+||++...               ...-..+.++|.+.++ .+|+.+..
T Consensus        96 --p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~~~-p~i~~~~~  152 (251)
T 1zud_1           96 --PDIQLTALQQRLT-GEALKDAVARADVVLDCTDN---------------MATRQEINAACVALNT-PLITASAV  152 (251)
T ss_dssp             --TTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS---------------HHHHHHHHHHHHHTTC-CEEEEEEE
T ss_pred             --CCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC---------------HHHHHHHHHHHHHhCC-CEEEEecc
Confidence              1123444444443 45677888999999998531               2233456667777775 57776554

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.54  E-value=0.0002  Score=73.03  Aligned_cols=98  Identities=15%  Similarity=0.174  Sum_probs=66.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+++|||+|| |.||..+++.+...|++|++++|++++.+.+.+    +         |      ... ..|..+.   
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------G------a~~-~~d~~~~~~~  221 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----L---------G------ADL-VVNPLKEDAA  221 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----T---------T------CSE-EECTTTSCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----C---------C------CCE-EecCCCccHH
Confidence            45679999999 779999999999999999999999887665432    2         2      111 1466543   


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.+.++.+++|+||+++|..               ......++.++..  ++||.++..
T Consensus       222 ~~~~~~~~~~d~vid~~g~~---------------~~~~~~~~~l~~~--G~~v~~g~~  263 (339)
T 1rjw_A          222 KFMKEKVGGVHAAVVTAVSK---------------PAFQSAYNSIRRG--GACVLVGLP  263 (339)
T ss_dssp             HHHHHHHSSEEEEEESSCCH---------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHHHhCCCCEEEECCCCH---------------HHHHHHHHHhhcC--CEEEEeccc
Confidence            22333336899999999841               1234444554443  489888764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.54  E-value=0.00025  Score=70.37  Aligned_cols=75  Identities=15%  Similarity=0.253  Sum_probs=54.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |++|+.++..|++.|++|+++.|+.++.+.+.+.+...              ..+..  .|+.   .+
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--------------~~~~~--~~~~---~~  176 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQA--VSMD---SI  176 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEE--EEGG---GC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--------------CCeEE--eeHH---Hh
Confidence            45789999997 88999999999999999999999998888776544221              12322  3331   11


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      .+  +++|+||||++..
T Consensus       177 ~~--~~~DivIn~t~~~  191 (272)
T 1p77_A          177 PL--QTYDLVINATSAG  191 (272)
T ss_dssp             CC--SCCSEEEECCCC-
T ss_pred             cc--CCCCEEEECCCCC
Confidence            11  4899999999854

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.53  E-value=0.00014  Score=74.19  Aligned_cols=99  Identities=14%  Similarity=0.143  Sum_probs=68.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |    .. .+  .|..+.+  
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~---------g----a~-~~--~d~~~~~~~  224 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----L---------G----AD-ET--VNYTHPDWP  224 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTSTTHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----c---------C----CC-EE--EcCCcccHH
Confidence            457899999999999999999999999999999999877665432    2         1    11 12  4665532  


Q ss_pred             -hHHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          156 -QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       156 -sl~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                       .+.++.  +++|+||+++| ..               ....+++.++..  ++||.++...
T Consensus       225 ~~~~~~~~~~~~d~vi~~~g-~~---------------~~~~~~~~l~~~--G~~v~~g~~~  268 (343)
T 2eih_A          225 KEVRRLTGGKGADKVVDHTG-AL---------------YFEGVIKATANG--GRIAIAGASS  268 (343)
T ss_dssp             HHHHHHTTTTCEEEEEESSC-SS---------------SHHHHHHHEEEE--EEEEESSCCC
T ss_pred             HHHHHHhCCCCceEEEECCC-HH---------------HHHHHHHhhccC--CEEEEEecCC
Confidence             344444  36999999998 21               123344555443  3899887654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.51  E-value=0.00033  Score=71.94  Aligned_cols=94  Identities=20%  Similarity=0.176  Sum_probs=58.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|+|.||+|.||+.|++.|++++|   +++++.........       ..            ..+..+...|+ +.+ 
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~-------~~------------~~g~~i~~~~~-~~~-   64 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-------MG------------FAESSLRVGDV-DSF-   64 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-------EE------------ETTEEEECEEG-GGC-
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc-------cc------------cCCcceEEecC-CHH-
Confidence            46899999999999999999997764   55655422110000       00            01111111222 121 


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                         .++++|+||.|.|..                .+..+++.+.+.|+ ++|.+|+..
T Consensus        65 ---~~~~~DvV~~a~g~~----------------~s~~~a~~~~~aG~-kvId~Sa~~  102 (340)
T 2hjs_A           65 ---DFSSVGLAFFAAAAE----------------VSRAHAERARAAGC-SVIDLSGAL  102 (340)
T ss_dssp             ---CGGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred             ---HhcCCCEEEEcCCcH----------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence               257899999998742                35677788888887 577778754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.51  E-value=0.00014  Score=74.72  Aligned_cols=76  Identities=17%  Similarity=0.271  Sum_probs=55.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |     .-.+  .|..+.+  
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~~--~~~~~~~~~  225 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----L---------G-----AKRG--INYRSEDFA  225 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c---------C-----CCEE--EeCCchHHH
Confidence            457899999999999999999999999999999999987765532    2         1     1122  3444432  


Q ss_pred             -hHHHHh-CCCcEEEEcccC
Q 009648          156 -QIEPAL-GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~-~~vD~VI~~Ag~  173 (530)
                       .+.++. +++|+||+|+|.
T Consensus       226 ~~~~~~~~~g~Dvvid~~g~  245 (353)
T 4dup_A          226 AVIKAETGQGVDIILDMIGA  245 (353)
T ss_dssp             HHHHHHHSSCEEEEEESCCG
T ss_pred             HHHHHHhCCCceEEEECCCH
Confidence             233332 479999999984

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.49  E-value=0.00069  Score=68.64  Aligned_cols=113  Identities=16%  Similarity=0.069  Sum_probs=78.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|| |.+|..++..|+..+  .+|++++++.++++.....+.+..          .....+.+.. |  +    .
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----------~~~~~~~v~~-~--~----~   62 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----------PFAHPVWVWA-G--S----Y   62 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----------GGSCCCEEEE-C--C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----------hhcCCeEEEE-C--C----H
Confidence            57999998 999999999999887  699999999877776544443220          0012344443 2  2    3


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++++|+||.++|........-......|....+.+++.+.+.+.. .||.+|
T Consensus        63 ~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           63 GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            45889999999999654433333345677888888899988887544 455543

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.49  E-value=9.9e-05  Score=76.02  Aligned_cols=98  Identities=12%  Similarity=0.046  Sum_probs=61.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++++|.|.||+|+||+.+++.|.+++ .+|+++.+..+....+...+            +.+  .++  ....+.+.+  
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~------------~~~--~g~--~~~~~~~~~--   64 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVH------------PNL--RGR--TNLKFVPPE--   64 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTC------------GGG--TTT--CCCBCBCGG--
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhC------------chh--cCc--ccccccchh--
Confidence            35789999999999999999999876 48888776433211110000            000  000  011222322  


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       . +.++|+||.|+|..                .+..+++.+.++|+ ++|-+|+.
T Consensus        65 -~-~~~vDvV~~a~g~~----------------~s~~~a~~~~~aG~-~VId~Sa~  101 (345)
T 2ozp_A           65 -K-LEPADILVLALPHG----------------VFAREFDRYSALAP-VLVDLSAD  101 (345)
T ss_dssp             -G-CCCCSEEEECCCTT----------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred             -H-hcCCCEEEEcCCcH----------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence             2 57999999998753                25666777778887 68888874

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.49  E-value=0.00021  Score=76.35  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=63.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +.|+|+|.| .|.+|++|++.|.++||+|+++++++++.+.+.+.                  -.+..+.||-++++.++
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~------------------~~~~~i~Gd~~~~~~L~   62 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK------------------YDLRVVNGHASHPDVLH   62 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH------------------SSCEEEESCTTCHHHHH
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh------------------cCcEEEEEcCCCHHHHH
Confidence            357899999 58999999999999999999999999887766431                  25788999999999988


Q ss_pred             HH-hCCCcEEEEccc
Q 009648          159 PA-LGNASVVICCIG  172 (530)
Q Consensus       159 ~a-~~~vD~VI~~Ag  172 (530)
                      ++ ++++|++|-+.+
T Consensus        63 ~Agi~~ad~~ia~t~   77 (461)
T 4g65_A           63 EAGAQDADMLVAVTN   77 (461)
T ss_dssp             HHTTTTCSEEEECCS
T ss_pred             hcCCCcCCEEEEEcC
Confidence            76 588999997754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.48  E-value=0.00036  Score=71.27  Aligned_cols=77  Identities=22%  Similarity=0.317  Sum_probs=55.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~s  156 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+    +         |     .-.++..+ .+. +.
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g-----a~~v~~~~-~~~~~~  218 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----V---------G-----ADIVLPLE-EGWAKA  218 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------T-----CSEEEESS-TTHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c---------C-----CcEEecCc-hhHHHH
Confidence            457899999999999999999999999999999999888765432    2         1     11233333 232 23


Q ss_pred             HHHHhC--CCcEEEEcccC
Q 009648          157 IEPALG--NASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~--~vD~VI~~Ag~  173 (530)
                      +.++..  ++|+||+|+|.
T Consensus       219 v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          219 VREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             HHHHTTTSCEEEEEESCC-
T ss_pred             HHHHhCCCCceEEEECCch
Confidence            444443  69999999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.48  E-value=0.00021  Score=71.45  Aligned_cols=75  Identities=19%  Similarity=0.286  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |      ...+ .|..+.+++
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g------a~~~-~~~~~~~~~  183 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----L---------G------AEEA-ATYAEVPER  183 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----T---------T------CSEE-EEGGGHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----c---------C------CCEE-EECCcchhH
Confidence            456799999999999999999999999999999999887765432    1         1      1111 355441334


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      .+.++++|+||+ +|.
T Consensus       184 ~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          184 AKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             HHHTTSEEEEEE-CSC
T ss_pred             HHHhcCceEEEE-CCH
Confidence            445589999999 874

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.47  E-value=0.00034  Score=70.76  Aligned_cols=115  Identities=17%  Similarity=0.038  Sum_probs=73.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|+ |.+|..++..|+..  |++|++++|++++.+.+...+.+. +...    +    ....+...  .|   +.
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~-~~~~----~----~~~~i~~t--~d---~~   65 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYES-GPVG----L----FDTKVTGS--ND---YA   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTT-HHHH----T----CCCEEEEE--SC---GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhh-hhcc----c----CCcEEEEC--CC---HH
Confidence            47999998 99999999999985  799999999998777654322211 0000    0    11122111  22   22


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      . ++++|+||.+++............+..|......+++.+.+.... .+|.++
T Consensus        66 ~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           66 D-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             G-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             H-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            3 789999999998543221112234557778888888888876433 455553

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.46  E-value=0.00067  Score=69.30  Aligned_cols=97  Identities=10%  Similarity=0.178  Sum_probs=65.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh---h
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---Q  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~---s  156 (530)
                      +++|||+||+|.||..+++.+...|++|+++++++++.+.+.+    +         |     --.+  .|..+.+   .
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~---------G-----a~~~--~~~~~~~~~~~  224 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----I---------G-----AAHV--LNEKAPDFEAT  224 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----H---------T-----CSEE--EETTSTTHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CCEE--EECCcHHHHHH
Confidence            3789999999999999999999999999999999988766532    2         1     1122  3444322   2


Q ss_pred             HHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          157 IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +.++.  +++|+||+|+|..                ....+++.++..  ++||.++...
T Consensus       225 v~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~G~~~  266 (349)
T 3pi7_A          225 LREVMKAEQPRIFLDAVTGP----------------LASAIFNAMPKR--ARWIIYGRLD  266 (349)
T ss_dssp             HHHHHHHHCCCEEEESSCHH----------------HHHHHHHHSCTT--CEEEECCCSC
T ss_pred             HHHHhcCCCCcEEEECCCCh----------------hHHHHHhhhcCC--CEEEEEeccC
Confidence            33333  3799999999841                123344444333  5899987654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.44  E-value=0.00049  Score=68.80  Aligned_cols=73  Identities=19%  Similarity=0.234  Sum_probs=55.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |++|+.++..|++.|+ +|+++.|+.++.+.+.+.+...              ..+..+.  +.+   
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~--------------~~~~~~~--~~~---  183 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY--------------GEVKAQA--FEQ---  183 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--------------SCEEEEE--GGG---
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--------------CCeeEee--HHH---
Confidence            46789999996 7899999999999995 9999999999888877654322              2344442  222   


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                         +..++|+|||+...
T Consensus       184 ---l~~~aDiIInaTp~  197 (281)
T 3o8q_A          184 ---LKQSYDVIINSTSA  197 (281)
T ss_dssp             ---CCSCEEEEEECSCC
T ss_pred             ---hcCCCCEEEEcCcC
Confidence               11689999999864

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.44  E-value=0.00045  Score=70.14  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=74.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|+ |.+|..++..|++.|+  +|++++|++++.+.+...+... +.         ......+..   .|.    
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~-~~---------~~~~~~i~~---~d~----   62 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHG-TP---------FTRRANIYA---GDY----   62 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-GG---------GSCCCEEEE---CCG----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhh-hh---------hcCCcEEEe---CCH----
Confidence            47999997 9999999999999999  9999999988777654433321 00         001222222   232    


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                      ++++++|+||.+++...............|....+.+++.+.+.... .+|.++
T Consensus        63 ~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            35789999999998654322222234556777788888888776444 444443

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.44  E-value=0.001  Score=66.96  Aligned_cols=117  Identities=16%  Similarity=0.133  Sum_probs=72.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.|+|.|+|+ |.+|..++..|+..|+  +|++++|+.++.+.....+.+          +......+.+...  .+.  
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~----------~~~~~~~~~v~~~--~~~--   70 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH----------GSSFYPTVSIDGS--DDP--   70 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH----------TGGGSTTCEEEEE--SCG--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHh----------hhhhcCCeEEEeC--CCH--
Confidence            3468999997 9999999999999998  999999998665522111111          1000012233222  122  


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                        ++++++|+||.+++............+..|......+++.+++.+.+.+|.+.+
T Consensus        71 --~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~  124 (319)
T 1lld_A           71 --EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  124 (319)
T ss_dssp             --GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             --HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence              346799999999986443222223345567777777787777654444444444

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.43  E-value=0.00012  Score=75.85  Aligned_cols=99  Identities=16%  Similarity=0.235  Sum_probs=62.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ++++|+|.||+|.||+.+++.|.++. .+|+++.+..+....+...+..+             ...+   ..|+.-.+  
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~-------------~~~v---~~dl~~~~--   76 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL-------------RAQK---LPTLVSVK--   76 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG-------------TTSC---CCCCBCGG--
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh-------------cCcc---cccceecc--
Confidence            34689999999999999999999886 58888876543222211111100             0111   13332222  


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      .+.++++|+||.|+|...                +...+..+ ++|+ ++|-+|+.
T Consensus        77 ~~~~~~vDvVf~atp~~~----------------s~~~a~~~-~aG~-~VId~sa~  114 (359)
T 1xyg_A           77 DADFSTVDAVFCCLPHGT----------------TQEIIKEL-PTAL-KIVDLSAD  114 (359)
T ss_dssp             GCCGGGCSEEEECCCTTT----------------HHHHHHTS-CTTC-EEEECSST
T ss_pred             hhHhcCCCEEEEcCCchh----------------HHHHHHHH-hCCC-EEEECCcc
Confidence            345678999999987532                45566667 7776 67777775

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.42  E-value=4.6e-05  Score=78.71  Aligned_cols=95  Identities=17%  Similarity=0.083  Sum_probs=61.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-----C-eEEEEECCch--h-HHHHHHHHHHhhhhccccccCCCCC-CCeEEEEe
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-----F-RVRAGVRSVQ--R-AENLVQSVKQMKLDGELANKGIQPV-EMLELVEC  149 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-----~-~V~~~~R~~~--k-~~~l~~~~~~~~l~~~~~~~g~~~~-~~v~~v~~  149 (530)
                      +++|+|.||||++|+.|++.|++++     + +|+++.+..+  + .....               +.... ..+.+  .
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~---------------~~l~~~~~~~~--~   71 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHH---------------PHLTPLAHRVV--E   71 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTC---------------TTCGGGTTCBC--E
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhc---------------ccccccceeee--c
Confidence            4789999999999999999999987     3 7777764321  1 11100               00000 12222  2


Q ss_pred             cCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       150 Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      |+ +.    ..+.++|+||.|+|...                +..+++.+ +.|+ ++|-+|+..
T Consensus        72 ~~-~~----~~~~~~DvVf~alg~~~----------------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           72 PT-EA----AVLGGHDAVFLALPHGH----------------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             EC-CH----HHHTTCSEEEECCTTSC----------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             cC-CH----HHhcCCCEEEECCCCcc----------------hHHHHHHH-hCCC-EEEEECCCc
Confidence            22 22    23569999999988642                45677777 7775 788888864

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.40  E-value=0.00025  Score=67.77  Aligned_cols=66  Identities=20%  Similarity=0.307  Sum_probs=51.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|+|+| +|.+|+.+++.|++.|++|++++|+.++.+.+.+                   .++.+.        ++.+
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-------------------~g~~~~--------~~~~   79 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-------------------SAAQVT--------FQEE   79 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-------------------TTSEEE--------EHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------cCCcee--------cHHH
Confidence            46899999 8999999999999999999999999876554311                   133331        3566


Q ss_pred             HhCCCcEEEEcccC
Q 009648          160 ALGNASVVICCIGA  173 (530)
Q Consensus       160 a~~~vD~VI~~Ag~  173 (530)
                      +++++|+||.+...
T Consensus        80 ~~~~~DvVi~av~~   93 (215)
T 2vns_A           80 AVSSPEVIFVAVFR   93 (215)
T ss_dssp             HTTSCSEEEECSCG
T ss_pred             HHhCCCEEEECCCh
Confidence            78899999999763

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.40  E-value=0.0004  Score=70.51  Aligned_cols=98  Identities=15%  Similarity=0.103  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+    +         |     .-.+  .|..+.   
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g-----a~~~--~~~~~~~~~  206 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----Y---------G-----AEYL--INASKEDIL  206 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T-----CSEE--EETTTSCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CcEE--EeCCCchHH
Confidence            457899999999999999999999999999999999887664432    1         1     1122  344432   


Q ss_pred             hhHHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          155 VQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.+.+..  +++|+||+|+|..                ....+++.++..  +++|.++..
T Consensus       207 ~~~~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~G~~  249 (334)
T 3qwb_A          207 RQVLKFTNGKGVDASFDSVGKD----------------TFEISLAALKRK--GVFVSFGNA  249 (334)
T ss_dssp             HHHHHHTTTSCEEEEEECCGGG----------------GHHHHHHHEEEE--EEEEECCCT
T ss_pred             HHHHHHhCCCCceEEEECCChH----------------HHHHHHHHhccC--CEEEEEcCC
Confidence            2344444  3699999999841                123344444333  488888754

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.39  E-value=0.00052  Score=72.65  Aligned_cols=43  Identities=26%  Similarity=0.309  Sum_probs=38.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+++|||+||+|.||..+++.+...|.+|+++++++++.+.+
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~  261 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV  261 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            4578999999999999999999999999999999988877655

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.38  E-value=0.00035  Score=71.38  Aligned_cols=76  Identities=16%  Similarity=0.117  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|||+||+|.||..+++.+... |++|++++|++++.+.+.+    +         |    .. .+  .|..+.+.
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~---------g----~~-~~--~~~~~~~~  228 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A---------G----AD-YV--INASMQDP  228 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTTSCH
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----h---------C----CC-EE--ecCCCccH
Confidence            45789999999999999999999998 9999999999877665422    2         1    11 12  35544332


Q ss_pred             ---HHHHh--CCCcEEEEcccC
Q 009648          157 ---IEPAL--GNASVVICCIGA  173 (530)
Q Consensus       157 ---l~~a~--~~vD~VI~~Ag~  173 (530)
                         +.++.  +++|+||+|+|.
T Consensus       229 ~~~~~~~~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          229 LAEIRRITESKGVDAVIDLNNS  250 (347)
T ss_dssp             HHHHHHHTTTSCEEEEEESCCC
T ss_pred             HHHHHHHhcCCCceEEEECCCC
Confidence               45555  479999999984

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.37  E-value=0.00088  Score=67.52  Aligned_cols=68  Identities=19%  Similarity=0.231  Sum_probs=53.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+|+|.|.| .|.+|..+++.|++.||+|++.+|+.++.+.+.+                   .++.+       ..++
T Consensus        19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-------------------~g~~~-------~~~~   71 (310)
T 3doj_A           19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-------------------HGASV-------CESP   71 (310)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-------------------TTCEE-------CSSH
T ss_pred             ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCeE-------cCCH
Confidence            4457899998 8999999999999999999999999988877643                   12221       1345


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      .++++++|+||.|..
T Consensus        72 ~~~~~~aDvvi~~vp   86 (310)
T 3doj_A           72 AEVIKKCKYTIAMLS   86 (310)
T ss_dssp             HHHHHHCSEEEECCS
T ss_pred             HHHHHhCCEEEEEcC
Confidence            667778999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.37  E-value=0.00033  Score=70.93  Aligned_cols=76  Identities=22%  Similarity=0.276  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |     .-.+  .|..+.   
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------G-----a~~~--~~~~~~~~~  198 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----L---------G-----AWET--IDYSHEDVA  198 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CCEE--EeCCCccHH
Confidence            457899999999999999999999999999999999887765432    2         1     1122  344443   


Q ss_pred             hhHHHHhC--CCcEEEEcccC
Q 009648          155 VQIEPALG--NASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~~--~vD~VI~~Ag~  173 (530)
                      +.+.+...  ++|+||+|+|.
T Consensus       199 ~~~~~~~~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          199 KRVLELTDGKKCPVVYDGVGQ  219 (325)
T ss_dssp             HHHHHHTTTCCEEEEEESSCG
T ss_pred             HHHHHHhCCCCceEEEECCCh
Confidence            23444443  69999999984

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.37  E-value=0.00027  Score=72.23  Aligned_cols=97  Identities=18%  Similarity=0.130  Sum_probs=64.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      .+.+|||+|| |.||..+++.+...|+ +|++++|++++.+.+.+    +         |.     -.+  .|..+.+  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~---------Ga-----~~~--~~~~~~~~~  225 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----V---------GA-----DYV--INPFEEDVV  225 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----H---------TC-----SEE--ECTTTSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h---------CC-----CEE--ECCCCcCHH
Confidence            5678999999 9999999999999999 99999999877665432    2         11     112  3554422  


Q ss_pred             -hHHHHhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          156 -QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       156 -sl~~a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       .+.++..  ++|+||+++|..               .....+++.++..  ++||.+++.
T Consensus       226 ~~v~~~~~g~g~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~  269 (348)
T 2d8a_A          226 KEVMDITDGNGVDVFLEFSGAP---------------KALEQGLQAVTPA--GRVSLLGLY  269 (348)
T ss_dssp             HHHHHHTTTSCEEEEEECSCCH---------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHHHcCCCCCCEEEECCCCH---------------HHHHHHHHHHhcC--CEEEEEccC
Confidence             2333332  699999999841               1233444544443  489988764

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.36  E-value=0.00081  Score=67.31  Aligned_cols=66  Identities=11%  Similarity=0.041  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +.++|.|.| .|.+|..+++.|++.||+|++++|++++.+.+.+                   .++.+       ..++.
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~   66 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-------------------AGATL-------ADSVA   66 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-------------------TTCEE-------CSSHH
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCEE-------cCCHH
Confidence            356899998 7999999999999999999999999988777643                   12222       13467


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ++++ +|+||.|..
T Consensus        67 ~~~~-aDvvi~~vp   79 (296)
T 3qha_A           67 DVAA-ADLIHITVL   79 (296)
T ss_dssp             HHTT-SSEEEECCS
T ss_pred             HHHh-CCEEEEECC
Confidence            7788 999999974

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.36  E-value=0.00073  Score=67.21  Aligned_cols=45  Identities=22%  Similarity=0.154  Sum_probs=39.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV  124 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~  124 (530)
                      +.++|.|.| .|.+|+.++..|++.|++|++++|++++.+.+.+.+
T Consensus         3 ~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            3 GITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            357899998 599999999999999999999999998877766554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.35  E-value=0.00027  Score=73.52  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=58.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|+|+ |.||+.+++.|...|++|++++|+.++.+.+.+.+            |    ..+.   .+..+.+.+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~------------g----~~~~---~~~~~~~~l  225 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF------------C----GRIH---TRYSSAYEL  225 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------------T----TSSE---EEECCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc------------C----CeeE---eccCCHHHH
Confidence            46789999998 99999999999999999999999988766543211            1    1111   233455667


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      .++++++|+||+|++..
T Consensus       226 ~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          226 EGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             HHHHHHCSEEEECCCCT
T ss_pred             HHHHcCCCEEEECCCcC
Confidence            88888999999998743

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.35  E-value=0.0011  Score=65.97  Aligned_cols=65  Identities=23%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|.| .|.+|..+++.|++.||+|++.+|++++.+.+.+                   .++.+       ..++.++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~~~   54 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-------------------LGAER-------AATPCEV   54 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence            6899999 7999999999999999999999999988777643                   12221       1346677


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.|..
T Consensus        55 ~~~aDvvi~~vp   66 (287)
T 3pef_A           55 VESCPVTFAMLA   66 (287)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhcCCEEEEEcC
Confidence            778999999864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=97.35  E-value=9.6e-05  Score=80.30  Aligned_cols=44  Identities=25%  Similarity=0.280  Sum_probs=35.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ..+++++|+|| |++|++++..|++.|++|+++.|+.++.+.+.+
T Consensus       362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~  405 (523)
T 2o7s_A          362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAE  405 (523)
T ss_dssp             ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            45678999998 799999999999999999999999888777654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.30  E-value=0.00048  Score=72.31  Aligned_cols=73  Identities=26%  Similarity=0.392  Sum_probs=55.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.+++.|...|+ +|++++|+.++...+.+.+            |      ...  .+   .++
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~------------g------~~~--~~---~~~  220 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL------------G------GEA--VR---FDE  220 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH------------T------CEE--CC---GGG
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------------C------Cce--ec---HHh
Confidence            46789999997 9999999999999998 9999999988765554321            1      121  12   235


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++.++|+||++.+..
T Consensus       221 l~~~l~~aDvVi~at~~~  238 (404)
T 1gpj_A          221 LVDHLARSDVVVSATAAP  238 (404)
T ss_dssp             HHHHHHTCSEEEECCSSS
T ss_pred             HHHHhcCCCEEEEccCCC
Confidence            677778999999998753

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.30  E-value=0.0014  Score=66.02  Aligned_cols=67  Identities=28%  Similarity=0.248  Sum_probs=52.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++|.|+| .|.+|..+++.|++.|++|++.+|+.++.+.+.+.                   ++..       ..++.
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------------------g~~~-------~~~~~   60 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-------------------GAHL-------CESVK   60 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-------------------TCEE-------CSSHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------------------CCee-------cCCHH
Confidence            456899998 89999999999999999999999999887765431                   1111       13466


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ++++++|+||.+..
T Consensus        61 e~~~~aDvVi~~vp   74 (306)
T 3l6d_A           61 AALSASPATIFVLL   74 (306)
T ss_dssp             HHHHHSSEEEECCS
T ss_pred             HHHhcCCEEEEEeC
Confidence            67778999999974

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.30  E-value=0.00066  Score=69.88  Aligned_cols=99  Identities=16%  Similarity=0.193  Sum_probs=66.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+    +         |    .. .+  .|..+.   
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------G----a~-~~--~~~~~~~~~  221 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----L---------G----CD-RP--INYKTEPVG  221 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T----CS-EE--EETTTSCHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----c---------C----Cc-EE--EecCChhHH
Confidence            457899999999999999999999999999999999877665432    2         1    11 22  244332   


Q ss_pred             hhHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          155 VQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       155 ~sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      +.+.+.. +++|+||+|+|.                .....+++.++..  ++||.+++..
T Consensus       222 ~~~~~~~~~g~D~vid~~g~----------------~~~~~~~~~l~~~--G~iv~~g~~~  264 (362)
T 2c0c_A          222 TVLKQEYPEGVDVVYESVGG----------------AMFDLAVDALATK--GRLIVIGFIS  264 (362)
T ss_dssp             HHHHHHCTTCEEEEEECSCT----------------HHHHHHHHHEEEE--EEEEECCCGG
T ss_pred             HHHHHhcCCCCCEEEECCCH----------------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence            2233322 369999999873                0133445555443  4899988754

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.28  E-value=0.0032  Score=63.72  Aligned_cols=70  Identities=16%  Similarity=0.069  Sum_probs=49.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch---hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~---k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .|+|.|+| .|.+|..+++.|++.| ++|++.+|+.+   +.+...+.+.+.               ++   .. .    
T Consensus        24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~---------------g~---~~-~----   79 (317)
T 4ezb_A           24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAEL---------------GV---EP-L----   79 (317)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHT---------------TC---EE-E----
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHC---------------CC---CC-C----
Confidence            47899999 8999999999999999 99999999872   333333322221               22   11 0    


Q ss_pred             hHHHHhCCCcEEEEcccC
Q 009648          156 QIEPALGNASVVICCIGA  173 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~  173 (530)
                      ++.++++++|+||.|...
T Consensus        80 s~~e~~~~aDvVi~avp~   97 (317)
T 4ezb_A           80 DDVAGIACADVVLSLVVG   97 (317)
T ss_dssp             SSGGGGGGCSEEEECCCG
T ss_pred             CHHHHHhcCCEEEEecCC
Confidence            234567789999999753

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.28  E-value=0.0021  Score=65.12  Aligned_cols=67  Identities=22%  Similarity=0.281  Sum_probs=53.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+|++++.+.+.+                   .++.+       ..++.
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-------------------~g~~~-------~~~~~   82 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-------------------LGATI-------HEQAR   82 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------------------TTCEE-------ESSHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-------------------CCCEe-------eCCHH
Confidence            457999998 6999999999999999999999999988776532                   12222       13467


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ++++++|+||.+..
T Consensus        83 e~~~~aDvVi~~vp   96 (320)
T 4dll_A           83 AAARDADIVVSMLE   96 (320)
T ss_dssp             HHHTTCSEEEECCS
T ss_pred             HHHhcCCEEEEECC
Confidence            78889999999874

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.27  E-value=0.0005  Score=69.98  Aligned_cols=76  Identities=20%  Similarity=0.260  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+++|||+||+|.||..+++.+...|++|++++|+.++.+.+.+    +         |    .. .+  .|..+.+  
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------g----a~-~~--~~~~~~~~~  202 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----L---------G----AA-YV--IDTSTAPLY  202 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T----CS-EE--EETTTSCHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----C---------C----Cc-EE--EeCCcccHH
Confidence            457899999999999999999998899999999999988766543    2         1    11 12  3444432  


Q ss_pred             -hHHHHh--CCCcEEEEcccC
Q 009648          156 -QIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~--~~vD~VI~~Ag~  173 (530)
                       .+.+..  +++|+||+|+|.
T Consensus       203 ~~~~~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          203 ETVMELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             HHHHHHTTTSCEEEEEESSCH
T ss_pred             HHHHHHhCCCCCcEEEECCCC
Confidence             233443  369999999984

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.26  E-value=0.00054  Score=70.64  Aligned_cols=99  Identities=17%  Similarity=0.177  Sum_probs=70.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+   ++         |      ... ..|..+.+.+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~l---------G------a~~-v~~~~~~~~~~  246 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NF---------G------ADS-FLVSRDQEQMQ  246 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TS---------C------CSE-EEETTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc---------C------Cce-EEeccCHHHHH
Confidence            5789999996 999999999999999999999999887665432   11         1      111 24666777777


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      ++.+++|+||+++|....               ....++.++..  ++||.+++..
T Consensus       247 ~~~~~~D~vid~~g~~~~---------------~~~~~~~l~~~--G~iv~~g~~~  285 (366)
T 1yqd_A          247 AAAGTLDGIIDTVSAVHP---------------LLPLFGLLKSH--GKLILVGAPE  285 (366)
T ss_dssp             HTTTCEEEEEECCSSCCC---------------SHHHHHHEEEE--EEEEECCCCS
T ss_pred             HhhCCCCEEEECCCcHHH---------------HHHHHHHHhcC--CEEEEEccCC
Confidence            777899999999985311               12334444333  4899887643

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.25  E-value=0.0034  Score=65.14  Aligned_cols=119  Identities=12%  Similarity=0.091  Sum_probs=77.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC--e---EEEEECCchh----HHHHHHHHHHhhhhccccccCCCC-CCCeEE
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--R---VRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQP-VEMLEL  146 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~---V~~~~R~~~k----~~~l~~~~~~~~l~~~~~~~g~~~-~~~v~~  146 (530)
                      +....+|.|+||+|+||..++-.|+..+.  +   |.+.+.+.++    +......+..          +... ...+.+
T Consensus        29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h----------~~~p~~~~v~i   98 (375)
T 7mdh_A           29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED----------SLYPLLREVSI   98 (375)
T ss_dssp             CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT----------TTCTTEEEEEE
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHh----------hhhhhcCCcEE
Confidence            45567899999999999999999998763  2   6665544333    3333222221          1110 011222


Q ss_pred             EEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCC-EEEEEcC
Q 009648          147 VECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVN-HFIMVSS  212 (530)
Q Consensus       147 v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~-r~V~iSS  212 (530)
                        .+     ....+++++|+||.+||............++.|..-.+.+++++.+. +.. .||.+|.
T Consensus        99 --~~-----~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A           99 --GI-----DPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             --ES-----CHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --ec-----CCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence              11     23678899999999999765544444567889999999999998874 333 5665554

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.23  E-value=0.0017  Score=67.06  Aligned_cols=107  Identities=8%  Similarity=0.080  Sum_probs=73.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.|+ |++|+.++..|+..| -++++++++.                   .|.+.+.+.+.++          
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~----------  184 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR----------  184 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH----------
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH----------
Confidence            34678999995 779999999999999 4899998863                   3566666666655          


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                       .+.-+++.+..++.+...+.. ++++|+||++.....              ..-..+-++|.+.++ .+|+.+.
T Consensus       185 -np~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~--------------~~r~~ln~~c~~~~~-p~i~~~~  242 (353)
T 3h5n_A          185 -NSEISVSEIALNINDYTDLHK-VPEADIWVVSADHPF--------------NLINWVNKYCVRANQ-PYINAGY  242 (353)
T ss_dssp             -CTTSEEEEEECCCCSGGGGGG-SCCCSEEEECCCCST--------------THHHHHHHHHHHTTC-CEEEEEE
T ss_pred             -CCCCeEEEeecccCchhhhhH-hccCCEEEEecCChH--------------HHHHHHHHHHHHhCC-CEEEEEE
Confidence             112356667777776554666 899999999853110              012334567888886 6776543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.23  E-value=0.0011  Score=68.67  Aligned_cols=44  Identities=23%  Similarity=0.178  Sum_probs=37.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+.+|+|.|+| .|.+|..+++.|++.|++|++++|+.++.+.+.
T Consensus        19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            45568999998 899999999999999999999999998877654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.21  E-value=0.00043  Score=69.00  Aligned_cols=41  Identities=24%  Similarity=0.119  Sum_probs=36.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      +|+|+|+| .|.+|..++..|++.|++|++++|++++.+.+.
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~   43 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR   43 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            36899999 599999999999999999999999988776654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.21  E-value=0.00067  Score=67.50  Aligned_cols=73  Identities=16%  Similarity=0.197  Sum_probs=54.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |++|+.++..|++.|. +|+++.|+.++.+.+.+.+..               ..+..+  ++.+.. 
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---------------~~~~~~--~~~~l~-  178 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---------------SRLRIS--RYEALE-  178 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---------------TTEEEE--CSGGGT-
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---------------CCeeEe--eHHHhc-
Confidence            56789999996 7899999999999995 999999999988887654320               124443  332221 


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                        .  .++|+|||+...
T Consensus       179 --~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 --G--QSFDIVVNATSA  191 (272)
T ss_dssp             --T--CCCSEEEECSSG
T ss_pred             --c--cCCCEEEECCCC
Confidence              1  689999999753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.21  E-value=0.00054  Score=70.57  Aligned_cols=71  Identities=17%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc---hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--H
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--R  154 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~---~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~  154 (530)
                      +++|||+|| |.||..+++.+...|++|++++|+.   ++.+.+.    ++               +.+.+  | .+  .
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~----~~---------------ga~~v--~-~~~~~  237 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE----ET---------------KTNYY--N-SSNGY  237 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH----HH---------------TCEEE--E-CTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH----Hh---------------CCcee--c-hHHHH
Confidence            789999999 9999999999999999999999988   6654332    12               12333  4 33  1


Q ss_pred             hhHHHHhCCCcEEEEcccC
Q 009648          155 VQIEPALGNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~  173 (530)
                      +.+.+.-+++|+||+++|.
T Consensus       238 ~~~~~~~~~~d~vid~~g~  256 (366)
T 2cdc_A          238 DKLKDSVGKFDVIIDATGA  256 (366)
T ss_dssp             HHHHHHHCCEEEEEECCCC
T ss_pred             HHHHHhCCCCCEEEECCCC
Confidence            2233212679999999985

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.0026  Score=64.98  Aligned_cols=75  Identities=24%  Similarity=0.231  Sum_probs=53.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC----
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK----  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d----  153 (530)
                      ..+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+    +         |.    . .+  .|..+    
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----l---------Ga----~-~~--~~~~~~~~~  225 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----C---------GA----D-VT--LVVDPAKEE  225 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T---------TC----S-EE--EECCTTTSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----h---------CC----C-EE--EcCcccccH
Confidence            45679999997 999999999988899999999999877665432    2         21    1 22  23332    


Q ss_pred             HhhHHHHh-----CCCcEEEEcccC
Q 009648          154 RVQIEPAL-----GNASVVICCIGA  173 (530)
Q Consensus       154 ~~sl~~a~-----~~vD~VI~~Ag~  173 (530)
                      .+.+.+..     +++|+||+++|.
T Consensus       226 ~~~i~~~~~~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          226 ESSIIERIRSAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             HHHHHHHhccccCCCCCEEEECCCC
Confidence            33455544     369999999874

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.15  E-value=0.0021  Score=65.76  Aligned_cols=80  Identities=13%  Similarity=0.281  Sum_probs=58.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      .+.+|+|.| .|++|+.+++.|+..| -++++++++.                   .|...+.+.++++           
T Consensus        33 ~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i-----------  100 (340)
T 3rui_A           33 KNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-----------  100 (340)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred             hCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh-----------
Confidence            457899999 6779999999999999 4888887753                   4666666666655           


Q ss_pred             CCCCCeEEEEec--CC--------------CHhhHHHHhCCCcEEEEccc
Q 009648          139 QPVEMLELVECD--LE--------------KRVQIEPALGNASVVICCIG  172 (530)
Q Consensus       139 ~~~~~v~~v~~D--l~--------------d~~sl~~a~~~vD~VI~~Ag  172 (530)
                        ++.+++...+  +.              +.+.+..+++++|+||+|.-
T Consensus       101 --nP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          101 --FPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             --CTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             --CCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence              2455544433  31              23446778899999999963

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.14  E-value=0.0011  Score=65.97  Aligned_cols=65  Identities=17%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ++|.|.| .|.+|..+++.|++.||+|++.+|++++.+.+.+.                   ++.+       ..++.++
T Consensus         2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------------------g~~~-------~~~~~~~   54 (287)
T 3pdu_A            2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------------------GARQ-------ASSPAEV   54 (287)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------------------TCEE-------CSCHHHH
T ss_pred             CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------------------CCee-------cCCHHHH
Confidence            5799998 89999999999999999999999999888776431                   1221       1245667


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.+..
T Consensus        55 ~~~advvi~~v~   66 (287)
T 3pdu_A           55 CAACDITIAMLA   66 (287)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HHcCCEEEEEcC
Confidence            778999999974

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.13  E-value=0.0031  Score=64.64  Aligned_cols=78  Identities=13%  Similarity=0.106  Sum_probs=54.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+.+|||+|+ |.||...++.+...|.+ |+++++++++.+.+.+ +      +          ..+.....|-.+.++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l------~----------~~~~~~~~~~~~~~~  239 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I------C----------PEVVTHKVERLSAEE  239 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H------C----------TTCEEEECCSCCHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h------c----------hhcccccccccchHH
Confidence            45678999998 99999999999899987 9999999887766543 1      1          223233334333333


Q ss_pred             HH----HHh--CCCcEEEEcccC
Q 009648          157 IE----PAL--GNASVVICCIGA  173 (530)
Q Consensus       157 l~----~a~--~~vD~VI~~Ag~  173 (530)
                      +.    ++.  +++|+||+++|.
T Consensus       240 ~~~~v~~~t~g~g~Dvvid~~g~  262 (363)
T 3m6i_A          240 SAKKIVESFGGIEPAVALECTGV  262 (363)
T ss_dssp             HHHHHHHHTSSCCCSEEEECSCC
T ss_pred             HHHHHHHHhCCCCCCEEEECCCC
Confidence            33    333  369999999874

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.13  E-value=0.001  Score=67.65  Aligned_cols=81  Identities=21%  Similarity=0.150  Sum_probs=53.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~sl~  158 (530)
                      .|+|+|.| .|.+|..++..|.+.|++|++++|++++.+.+.+... ..+.      +    ..... ...+. ...++.
T Consensus         4 ~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~------~----~~~~~-~~~~~~~~~~~~   70 (359)
T 1bg6_A            4 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGA-IIAE------G----PGLAG-TAHPDLLTSDIG   70 (359)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTS-EEEE------S----SSCCE-EECCSEEESCHH
T ss_pred             cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCC-eEEe------c----ccccc-ccccceecCCHH
Confidence            47899999 5999999999999999999999999887766543100 0000      0    00000 01110 122356


Q ss_pred             HHhCCCcEEEEcccC
Q 009648          159 PALGNASVVICCIGA  173 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~  173 (530)
                      ++++++|+||.+...
T Consensus        71 ~~~~~~D~vi~~v~~   85 (359)
T 1bg6_A           71 LAVKDADVILIVVPA   85 (359)
T ss_dssp             HHHTTCSEEEECSCG
T ss_pred             HHHhcCCEEEEeCCc
Confidence            677899999999753

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.12  E-value=0.0041  Score=60.84  Aligned_cols=99  Identities=17%  Similarity=0.184  Sum_probs=64.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ++|+|.|++|.+|+.+++.+.+. |++|+++.+....+..+..                   .... +..|++.++...+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-------------------~~~D-vvIDfT~p~a~~~   60 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPDVVMG   60 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-------------------TTCC-EEEECSCTTTHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-------------------cCCc-EEEEccChHHHHH
Confidence            47999999999999999999876 8999977765444333221                   1223 4478888776554


Q ss_pred             Hh-----CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCC
Q 009648          160 AL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLG  214 (530)
Q Consensus       160 a~-----~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~  214 (530)
                      .+     .++++||...|...              .-...|.++|++. ++ .+++.+.++
T Consensus        61 ~~~~a~~~g~~~VigTTG~~~--------------e~~~~l~~aa~~~~~~-~vv~a~N~s  106 (245)
T 1p9l_A           61 NLEFLIDNGIHAVVGTTGFTA--------------ERFQQVESWLVAKPNT-SVLIAPNFA  106 (245)
T ss_dssp             HHHHHHHTTCEEEECCCCCCH--------------HHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred             HHHHHHHcCCCEEEcCCCCCH--------------HHHHHHHHHHHhCCCC-CEEEECCcc
Confidence            33     47899998876321              1123455556655 44 667766643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.11  E-value=0.00076  Score=66.96  Aligned_cols=66  Identities=23%  Similarity=0.313  Sum_probs=50.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|.|+|++|.+|+.+++.|++.|++|++++|+.++.+.+.+    .         |      +     +..+   ..+
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~---------g------~-----~~~~---~~~   63 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG----M---------G------I-----PLTD---GDG   63 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----T---------T------C-----CCCC---SSG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c---------C------C-----CcCC---HHH
Confidence            4689999999999999999999999999999999877665432    1         1      1     1112   334


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++++|+||.+..
T Consensus        64 ~~~~aDvVi~av~   76 (286)
T 3c24_A           64 WIDEADVVVLALP   76 (286)
T ss_dssp             GGGTCSEEEECSC
T ss_pred             HhcCCCEEEEcCC
Confidence            6678999999864

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.10  E-value=0.00063  Score=72.05  Aligned_cols=40  Identities=20%  Similarity=0.087  Sum_probs=36.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| +|.+|..++..|++.|++|++++|++++.+.+.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~   40 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence            4799998 899999999999999999999999998877654

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=97.10  E-value=0.014  Score=58.47  Aligned_cols=90  Identities=19%  Similarity=0.306  Sum_probs=61.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +.++|+|.|++|..|+.+++.|.+.|++++..+... +.                   | ....++.++       .++.
T Consensus         6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~-~~-------------------g-~~i~G~~vy-------~sl~   57 (288)
T 1oi7_A            6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPG-KG-------------------G-MEVLGVPVY-------DTVK   57 (288)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTT-CT-------------------T-CEETTEEEE-------SSHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCC-CC-------------------C-ceECCEEee-------CCHH
Confidence            456899999999999999999999999965433221 10                   0 000122222       2355


Q ss_pred             HHhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          159 PALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       159 ~a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ++.+  .+|++|.+..                -..+..+++.|.+.|++.+|.+++
T Consensus        58 el~~~~~~Dv~Ii~vp----------------~~~~~~~~~ea~~~Gi~~vVi~t~   97 (288)
T 1oi7_A           58 EAVAHHEVDASIIFVP----------------APAAADAALEAAHAGIPLIVLITE   97 (288)
T ss_dssp             HHHHHSCCSEEEECCC----------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             HHhhcCCCCEEEEecC----------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence            5555  8999998853                235778888999999977777664

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.08  E-value=0.00024  Score=70.76  Aligned_cols=34  Identities=24%  Similarity=0.432  Sum_probs=28.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEEC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVR  112 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R  112 (530)
                      ++++|+|+|++|++|+.+++.+.+ .|++|+++.+
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            347999999999999999999885 4788885544

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.07  E-value=0.0018  Score=65.51  Aligned_cols=114  Identities=12%  Similarity=0.173  Sum_probs=77.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~sl~~  159 (530)
                      +|.|+|| |.+|..++..|+..|. +|+++++++++++.....+.+....         ....+.+.. .|      . +
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~---------~~~~~~i~~t~d------~-~   63 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE---------LGVDIRISGSNS------Y-E   63 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH---------HTCCCCEEEESC------G-G
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh---------cCCCeEEEECCC------H-H
Confidence            4899998 9999999999998887 7999999988776654444332100         001222222 22      2 4


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcC
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS  212 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS  212 (530)
                      +++++|+||.++|........-......|....+.+++.+.+.... .+|.+|-
T Consensus        64 a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           64 DMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             GGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999999755433333445677888888899988876444 5565543

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.05  E-value=0.00043  Score=69.06  Aligned_cols=70  Identities=20%  Similarity=0.261  Sum_probs=53.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |.+|+.++..|++.|+ +|+++.|+.++.+.+.                    ..+..+     ..++
T Consensus       115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la--------------------~~~~~~-----~~~~  168 (277)
T 3don_A          115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS--------------------LNINKI-----NLSH  168 (277)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC--------------------SCCEEE-----CHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--------------------Hhcccc-----cHhh
Confidence            45789999996 8999999999999998 9999999988765431                    122221     2445


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +.+++.++|+|||+...
T Consensus       169 ~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          169 AESHLDEFDIIINTTPA  185 (277)
T ss_dssp             HHHTGGGCSEEEECCC-
T ss_pred             HHHHhcCCCEEEECccC
Confidence            67778899999999754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.05  E-value=0.001  Score=67.92  Aligned_cols=75  Identities=19%  Similarity=0.228  Sum_probs=52.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~s  156 (530)
                      ..+.+|||+||+|.||..+++.+...|++|+++ ++.++.+.+.    ++         |      ...+. +-.+. +.
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~----~l---------G------a~~i~-~~~~~~~~  207 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR----DL---------G------ATPID-ASREPEDY  207 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH----HH---------T------SEEEE-TTSCHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH----Hc---------C------CCEec-cCCCHHHH
Confidence            457899999999999999999999999999998 7776655432    22         1      12222 22222 22


Q ss_pred             HHHHh--CCCcEEEEcccC
Q 009648          157 IEPAL--GNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~  173 (530)
                      +.+..  +++|+||+|+|.
T Consensus       208 ~~~~~~~~g~D~vid~~g~  226 (343)
T 3gaz_A          208 AAEHTAGQGFDLVYDTLGG  226 (343)
T ss_dssp             HHHHHTTSCEEEEEESSCT
T ss_pred             HHHHhcCCCceEEEECCCc
Confidence            33443  379999999983

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.05  E-value=0.0013  Score=70.07  Aligned_cols=86  Identities=21%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccc-cccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGEL-ANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~-~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+|.|.| .|++|..++..|++.|++|++++|++++.+.+.+.......++.. .........++.+.       .++.+
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-------~d~~e   74 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-------TEIEQ   74 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-------SCHHH
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-------CCHHH
Confidence            6899998 699999999999999999999999998887765410000000000 00000001223221       23566


Q ss_pred             HhCCCcEEEEcccCC
Q 009648          160 ALGNASVVICCIGAS  174 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~  174 (530)
                      +++++|+||.|.+..
T Consensus        75 a~~~aDvViiaVptp   89 (450)
T 3gg2_A           75 AVPEADIIFIAVGTP   89 (450)
T ss_dssp             HGGGCSEEEECCCCC
T ss_pred             HHhcCCEEEEEcCCC
Confidence            788999999998743

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.04  E-value=0.003  Score=63.62  Aligned_cols=66  Identities=21%  Similarity=0.208  Sum_probs=53.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|-++| -|.+|..+++.|++.||+|++.+|+.++.+.+.+                   .+...       .++..+
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~-------------------~Ga~~-------a~s~~e   55 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-------------------AGASA-------ARSARD   55 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-------------------TTCEE-------CSSHHH
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-------------------cCCEE-------cCCHHH
Confidence            46899999 8999999999999999999999999998887654                   11111       235778


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++++|+||.|..
T Consensus        56 ~~~~~dvv~~~l~   68 (300)
T 3obb_A           56 AVQGADVVISMLP   68 (300)
T ss_dssp             HHTTCSEEEECCS
T ss_pred             HHhcCCceeecCC
Confidence            8899999999964

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.04  E-value=0.001  Score=67.13  Aligned_cols=69  Identities=13%  Similarity=0.097  Sum_probs=49.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..+|+|.|+| .|.+|..+++.|++.|+ +|++.+|+.  ++.+.+.+                   .++.+       .
T Consensus        22 ~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~-------------------~g~~~-------~   74 (312)
T 3qsg_A           22 SNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE-------------------LGVSC-------K   74 (312)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH-------------------TTCEE-------C
T ss_pred             CCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH-------------------CCCEE-------e
Confidence            3457999998 69999999999999999 999999973  44443321                   12222       1


Q ss_pred             hhHHHHhCCCcEEEEcccC
Q 009648          155 VQIEPALGNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~  173 (530)
                      .+..++++++|+||.|...
T Consensus        75 ~~~~e~~~~aDvVi~~vp~   93 (312)
T 3qsg_A           75 ASVAEVAGECDVIFSLVTA   93 (312)
T ss_dssp             SCHHHHHHHCSEEEECSCT
T ss_pred             CCHHHHHhcCCEEEEecCc
Confidence            2356677789999999753

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.04  E-value=0.0015  Score=66.69  Aligned_cols=75  Identities=17%  Similarity=0.197  Sum_probs=53.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--Hhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~s  156 (530)
                      .+.+|||+||+|.||..+++.+...|++|+++++++++.+.+.+    +         |.     -.+  .|..+  .+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----l---------Ga-----~~v--i~~~~~~~~~  209 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----M---------GA-----DIV--LNHKESLLNQ  209 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----H---------TC-----SEE--ECTTSCHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c---------CC-----cEE--EECCccHHHH
Confidence            57899999999999999999999999999999998887665532    2         11     112  23332  122


Q ss_pred             HHHHh-CCCcEEEEcccC
Q 009648          157 IEPAL-GNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~-~~vD~VI~~Ag~  173 (530)
                      +.++. +++|+||+|+|.
T Consensus       210 ~~~~~~~g~Dvv~d~~g~  227 (346)
T 3fbg_A          210 FKTQGIELVDYVFCTFNT  227 (346)
T ss_dssp             HHHHTCCCEEEEEESSCH
T ss_pred             HHHhCCCCccEEEECCCc
Confidence            33332 369999999873

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.03  E-value=0.0024  Score=64.01  Aligned_cols=72  Identities=21%  Similarity=0.316  Sum_probs=55.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|+|.| .|.||+.+++.|...|++|++++|+.++...+.+    .               +++.+.     .++
T Consensus       154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~---------------g~~~~~-----~~~  208 (300)
T 2rir_A          154 TIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITE----M---------------GLVPFH-----TDE  208 (300)
T ss_dssp             CSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------------TCEEEE-----GGG
T ss_pred             CCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C---------------CCeEEc-----hhh
Confidence            45688999999 5999999999999999999999999866544321    1               223221     245


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +.++++++|+||++...
T Consensus       209 l~~~l~~aDvVi~~~p~  225 (300)
T 2rir_A          209 LKEHVKDIDICINTIPS  225 (300)
T ss_dssp             HHHHSTTCSEEEECCSS
T ss_pred             HHHHhhCCCEEEECCCh
Confidence            77888999999999874

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.02  E-value=0.0041  Score=55.33  Aligned_cols=87  Identities=17%  Similarity=0.214  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           78 KDDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        78 ~~~k~VLVTGAt---G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .+.++|.|.|++   |.+|..+++.|++.|++|+.+.++.+..                        .++..       .
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------------------~G~~~-------~   60 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGLKC-------Y   60 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEEC-------B
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------------------CCeee-------c
Confidence            456789999997   8999999999999999977766553211                        11221       1


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      .++.++.+.+|+||-+...                ..+..+++.|.+.|++.++..+
T Consensus        61 ~s~~el~~~vDlvii~vp~----------------~~v~~v~~~~~~~g~~~i~~~~  101 (138)
T 1y81_A           61 RSVRELPKDVDVIVFVVPP----------------KVGLQVAKEAVEAGFKKLWFQP  101 (138)
T ss_dssp             SSGGGSCTTCCEEEECSCH----------------HHHHHHHHHHHHTTCCEEEECT
T ss_pred             CCHHHhCCCCCEEEEEeCH----------------HHHHHHHHHHHHcCCCEEEEcC
Confidence            2234444579999988641                2456677777778888766655

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.01  E-value=0.00067  Score=69.56  Aligned_cols=93  Identities=15%  Similarity=0.131  Sum_probs=59.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|.|.||+|.||+.|++.|.+++   ++|+++....+.-..       +.+          ....+.+  .|+. .+ 
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~-------~~~----------~~~~i~~--~~~~-~~-   61 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT-------YRF----------NGKTVRV--QNVE-EF-   61 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE-------EEE----------TTEEEEE--EEGG-GC-
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc-------eee----------cCceeEE--ecCC-hH-
Confidence            4689999999999999999999984   577777632110000       000          0012233  2221 11 


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                         .++++|+||.|.|..                .+...+..+.+.|+ ++|-+|+.
T Consensus        62 ---~~~~vDvVf~a~g~~----------------~s~~~a~~~~~~G~-~vId~s~~   98 (336)
T 2r00_A           62 ---DWSQVHIALFSAGGE----------------LSAKWAPIAAEAGV-VVIDNTSH   98 (336)
T ss_dssp             ---CGGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred             ---HhcCCCEEEECCCch----------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence               346899999998742                35667777788887 67777875

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=97.00  E-value=0.00052  Score=69.07  Aligned_cols=66  Identities=18%  Similarity=0.251  Sum_probs=45.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .+||.++| -|.+|..+++.|+++||+|++.+|+.++.+.+.+                   .++..       .++..+
T Consensus         5 s~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-------------------~G~~~-------~~s~~e   57 (297)
T 4gbj_A            5 SEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK-------------------LGATV-------VENAID   57 (297)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT-------------------TTCEE-------CSSGGG
T ss_pred             CCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------cCCeE-------eCCHHH
Confidence            35799998 8999999999999999999999999887655421                   12222       134567


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++.+|+||.|..
T Consensus        58 ~~~~~dvvi~~l~   70 (297)
T 4gbj_A           58 AITPGGIVFSVLA   70 (297)
T ss_dssp             GCCTTCEEEECCS
T ss_pred             HHhcCCceeeecc
Confidence            7889999999864

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=97.00  E-value=0.0023  Score=63.96  Aligned_cols=44  Identities=14%  Similarity=0.042  Sum_probs=38.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS  123 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~  123 (530)
                      ..++|.|.|+ |.+|..++..|++.|++|++++|++++.+...+.
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~   57 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   57 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence            3568999995 9999999999999999999999999887765443

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.97  E-value=0.0014  Score=67.08  Aligned_cols=95  Identities=15%  Similarity=0.121  Sum_probs=62.6

Q ss_pred             CEEEEECCCcHHHHHH-HHHH-HhCCCe-EEEEECCch---hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           81 NLAFVAGATGKVGSRT-VREL-LKLGFR-VRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~L-v~~L-l~~G~~-V~~~~R~~~---k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .+|||+|| |.||... ++.+ ...|.+ |++++++++   +.+.+.+    +               +.+.+  |..+.
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----l---------------Ga~~v--~~~~~  231 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----L---------------DATYV--DSRQT  231 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----T---------------TCEEE--ETTTS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----c---------------CCccc--CCCcc
Confidence            79999999 9999999 8877 677987 999999887   7665432    2               23344  55432


Q ss_pred             --hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          155 --VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       155 --~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        ..+.++-+++|+||+++|..               ......++.++..  ++||.++...
T Consensus       232 ~~~~i~~~~gg~Dvvid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~~  276 (357)
T 2b5w_A          232 PVEDVPDVYEQMDFIYEATGFP---------------KHAIQSVQALAPN--GVGALLGVPS  276 (357)
T ss_dssp             CGGGHHHHSCCEEEEEECSCCH---------------HHHHHHHHHEEEE--EEEEECCCCC
T ss_pred             CHHHHHHhCCCCCEEEECCCCh---------------HHHHHHHHHHhcC--CEEEEEeCCC
Confidence              22444423699999998741               1123344444433  4898887643

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.0018  Score=66.90  Aligned_cols=75  Identities=17%  Similarity=0.194  Sum_probs=56.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+    +         |.     -.+  .|..+.+.+
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----l---------Ga-----~~v--i~~~~~~~~  251 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----L---------GA-----DEV--VNSRNADEM  251 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------TC-----SEE--EETTCHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------CC-----cEE--eccccHHHH
Confidence            45679999997 889999999988899999999999888765532    2         21     112  456665545


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      +++.+++|+||+++|.
T Consensus       252 ~~~~~g~Dvvid~~g~  267 (369)
T 1uuf_A          252 AAHLKSFDFILNTVAA  267 (369)
T ss_dssp             HTTTTCEEEEEECCSS
T ss_pred             HHhhcCCCEEEECCCC
Confidence            5555789999999985

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.95  E-value=0.0023  Score=67.88  Aligned_cols=43  Identities=30%  Similarity=0.268  Sum_probs=38.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+||+|.||...++.+...|.+|+++++++++.+.+
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~  269 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC  269 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            4578999999999999999999999999999999988776655

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=96.95  E-value=0.0021  Score=65.86  Aligned_cols=102  Identities=16%  Similarity=0.104  Sum_probs=62.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCc---hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~---~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|.|.||||++|+.|++.|.++ ++++..+.++.   +.-+.+.+.+..+  .      +   ...+.+...  .+. 
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~--~------~---~~~~~v~~~--~~~-   69 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQL--K------G---IVELPLQPM--SDI-   69 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGG--T------T---TCCCBEEEE--SSG-
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccc--c------C---ccceeEecc--CCH-
Confidence            368999999999999999999985 57888876544   2222221111101  0      0   012333322  011 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                        .+++.++|+||.|.+.                ..+..++..+.+.|+ ++|-+|+..
T Consensus        70 --~~~~~~~Dvvf~a~p~----------------~~s~~~~~~~~~~g~-~vIDlSa~f  109 (337)
T 3dr3_A           70 --SEFSPGVDVVFLATAH----------------EVSHDLAPQFLEAGC-VVFDLSGAF  109 (337)
T ss_dssp             --GGTCTTCSEEEECSCH----------------HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred             --HHHhcCCCEEEECCCh----------------HHHHHHHHHHHHCCC-EEEEcCCcc
Confidence              2223789999999864                235667777777887 778788753

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.93  E-value=0.00041  Score=63.04  Aligned_cols=71  Identities=17%  Similarity=0.269  Sum_probs=50.7

Q ss_pred             CcHHHHHHHHHHHhCCCeEEEEECCchhHH---HHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH--hhHHHHh--
Q 009648           89 TGKVGSRTVRELLKLGFRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--VQIEPAL--  161 (530)
Q Consensus        89 tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~---~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--~sl~~a~--  161 (530)
                      +|+++..+++.|++.|++|++..|+.....   .+.+.+++.         |    .++..+.+|+.++  +++.+++  
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---------G----~~~~~i~~Dv~~~~~~~v~~~~~~   91 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---------G----MDYVYIPVDWQNPKVEDVEAFFAA   91 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---------T----CEEEECCCCTTSCCHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---------C----CeEEEecCCCCCCCHHHHHHHHHH
Confidence            357889999999999999999888754321   122222222         2    4567788999998  7776655  


Q ss_pred             -----CCCcEEEEcccC
Q 009648          162 -----GNASVVICCIGA  173 (530)
Q Consensus       162 -----~~vD~VI~~Ag~  173 (530)
                           ++ |++|||||.
T Consensus        92 i~~~~G~-dVLVnnAgg  107 (157)
T 3gxh_A           92 MDQHKGK-DVLVHCLAN  107 (157)
T ss_dssp             HHHTTTS-CEEEECSBS
T ss_pred             HHhcCCC-CEEEECCCC
Confidence                 34 999999985

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.92  E-value=0.0014  Score=65.19  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=29.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEE-ECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~-~R~~  114 (530)
                      +++|.|+||+|.+|+.+++.+.++ +++++++ +|+.
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            578999999999999999999876 6788774 5654

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.91  E-value=0.0018  Score=69.02  Aligned_cols=95  Identities=13%  Similarity=0.072  Sum_probs=65.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-C---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-F---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--  153 (530)
                      .++|+|.| .|.||+.+++.|++++ +   +|+++++..... .+.+.                  -++.++..++++  
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~------------------~g~~~~~~~Vdadn   72 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQ------------------YGVSFKLQQITPQN   72 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHH------------------HTCEEEECCCCTTT
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhh------------------cCCceeEEeccchh
Confidence            35799999 8999999999999874 4   788888766542 21110                  134666666644  


Q ss_pred             H-hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          154 R-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       154 ~-~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      . +.+.+++++.|+|||++-..                ....++++|.++|+ ++|-++
T Consensus        73 v~~~l~aLl~~~DvVIN~s~~~----------------~~l~Im~acleaGv-~YlDTa  114 (480)
T 2ph5_A           73 YLEVIGSTLEENDFLIDVSIGI----------------SSLALIILCNQKGA-LYINAA  114 (480)
T ss_dssp             HHHHTGGGCCTTCEEEECCSSS----------------CHHHHHHHHHHHTC-EEEESS
T ss_pred             HHHHHHHHhcCCCEEEECCccc----------------cCHHHHHHHHHcCC-CEEECC
Confidence            3 33566777779999865221                25678999999998 665544

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=96.90  E-value=0.0022  Score=66.14  Aligned_cols=34  Identities=38%  Similarity=0.337  Sum_probs=29.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~  113 (530)
                      +++|.|.||+|+||+.+++.|.+++ ++|+++.|+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            4689999999999999999998875 688888753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.90  E-value=0.0016  Score=67.82  Aligned_cols=75  Identities=17%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC-------
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-------  151 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl-------  151 (530)
                      .+.+|+|+|+ |-+|..+++.|...|++|++++|+..+.+.+.+    +               +.+++..|+       
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----l---------------Ga~~~~l~~~~~~~~g  242 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----V---------------GAQWLDLGIDAAGEGG  242 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----T---------------TCEECCCC--------
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------------CCeEEecccccccccc
Confidence            5679999996 999999999999999999999999988776543    1               122322111       


Q ss_pred             -----------CCHhhHHHHhCCCcEEEEcccC
Q 009648          152 -----------EKRVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       152 -----------~d~~sl~~a~~~vD~VI~~Ag~  173 (530)
                                 .+.+.+.++++++|+||+++..
T Consensus       243 ya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          243 YARELSEAERAQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             -----CHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred             chhhhhHHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence                       1235678888999999998753

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.89  E-value=0.0007  Score=64.77  Aligned_cols=43  Identities=12%  Similarity=0.148  Sum_probs=38.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEE-EECCchhHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQ  122 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~-~~R~~~k~~~l~~  122 (530)
                      ++|+|.|+| +|.+|..+++.|++.|++|++ .+|++++.+.+.+
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~   65 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD   65 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH
Confidence            357899999 899999999999999999999 8999988777654

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.89  E-value=0.0013  Score=68.10  Aligned_cols=93  Identities=17%  Similarity=0.225  Sum_probs=57.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|.|.||||++|..|++.|.+++|   +++.+.-....-..+                   ...+.++..-++..   
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~-------------------~~~~~~~~~~~~~~---   59 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL-------------------KFKDQDITIEETTE---   59 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEE-------------------EETTEEEEEEECCT---
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcc-------------------eecCCCceEeeCCH---
Confidence            46899999999999999999998876   444444221100000                   00111222222221   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                        ..+.++|+||.|+|.                ..+..++..+.+.|+ ++|-+|+.
T Consensus        60 --~~~~~~Dvvf~a~~~----------------~~s~~~a~~~~~~G~-~vIDlSa~   97 (366)
T 3pwk_A           60 --TAFEGVDIALFSAGS----------------STSAKYAPYAVKAGV-VVVDNTSY   97 (366)
T ss_dssp             --TTTTTCSEEEECSCH----------------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             --HHhcCCCEEEECCCh----------------HhHHHHHHHHHHCCC-EEEEcCCc
Confidence              125789999999873                235667777777887 67777875

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.88  E-value=0.0025  Score=64.49  Aligned_cols=36  Identities=25%  Similarity=0.408  Sum_probs=30.9

Q ss_pred             CCCE-EEEE-CCC-----------------cHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           79 DDNL-AFVA-GAT-----------------GKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        79 ~~k~-VLVT-GAt-----------------G~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .+++ |||| |||                 |..|.+++++++++|++|+++.|..
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            3455 8888 666                 9999999999999999999999864

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=96.88  E-value=0.0052  Score=63.13  Aligned_cols=108  Identities=14%  Similarity=0.183  Sum_probs=73.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC-------------------chhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~-------------------~~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|.++++.|+..|. ++++++.+                   ..|...+.++++++.         
T Consensus        34 L~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln---------  103 (346)
T 1y8q_A           34 LRASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN---------  103 (346)
T ss_dssp             HHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC---------
T ss_pred             HhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC---------
Confidence            3456899999 57799999999999995 88888532                   246666666666551         


Q ss_pred             CCCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                        +.-+++.+..++.+  .....++++|+||++..               |...-..|-++|.+.++ .||...+.|.
T Consensus       104 --p~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d---------------~~~~r~~ln~~~~~~~i-p~i~~~~~G~  161 (346)
T 1y8q_A          104 --PMVDVKVDTEDIEK--KPESFFTQFDAVCLTCC---------------SRDVIVKVDQICHKNSI-KFFTGDVFGY  161 (346)
T ss_dssp             --TTSEEEEECSCGGG--CCHHHHTTCSEEEEESC---------------CHHHHHHHHHHHHHTTC-EEEEEEEEBT
T ss_pred             --CCeEEEEEecccCc--chHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEeeccc
Confidence              11234455455533  24567889999999842               13344557778888875 7887766544

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.88  E-value=0.0059  Score=62.89  Aligned_cols=75  Identities=19%  Similarity=0.164  Sum_probs=52.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+.+|||+||+|.||...++.+...|++|+++. ++++.+.+.    ++         |     --++  .|..+.+  
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~----~l---------G-----a~~v--i~~~~~~~~  221 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK----SR---------G-----AEEV--FDYRAPNLA  221 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH----HT---------T-----CSEE--EETTSTTHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH----Hc---------C-----CcEE--EECCCchHH
Confidence            4578999999999999999999999999999887 566655432    22         2     1122  3444432  


Q ss_pred             -hHHHHh-CCCcEEEEcccC
Q 009648          156 -QIEPAL-GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~-~~vD~VI~~Ag~  173 (530)
                       .+.++. +++|+||.|+|.
T Consensus       222 ~~v~~~t~g~~d~v~d~~g~  241 (371)
T 3gqv_A          222 QTIRTYTKNNLRYALDCITN  241 (371)
T ss_dssp             HHHHHHTTTCCCEEEESSCS
T ss_pred             HHHHHHccCCccEEEECCCc
Confidence             334433 359999999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.87  E-value=0.0011  Score=67.94  Aligned_cols=75  Identities=16%  Similarity=0.169  Sum_probs=54.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~s  156 (530)
                      ..+.+|||+|| |.||..+++.+...|++|++++|++++.+.+.+    +         |     --++  .|..+. +.
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~v--~~~~~~~~~  236 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----M---------G-----ADHY--IATLEEGDW  236 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T-----CSEE--EEGGGTSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c---------C-----CCEE--EcCcCchHH
Confidence            35679999999 999999999888899999999999887765432    2         1     1122  344333 22


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      .+.+.+++|+||+++|.
T Consensus       237 ~~~~~~~~D~vid~~g~  253 (360)
T 1piw_A          237 GEKYFDTFDLIVVCASS  253 (360)
T ss_dssp             HHHSCSCEEEEEECCSC
T ss_pred             HHHhhcCCCEEEECCCC
Confidence            33333689999999985

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.87  E-value=0.0039  Score=62.33  Aligned_cols=72  Identities=25%  Similarity=0.347  Sum_probs=54.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|+|.| .|.||+.+++.|...|++|++++|+..+...+.+    +               +++++     +.++
T Consensus       152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~---------------g~~~~-----~~~~  206 (293)
T 3d4o_A          152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE----M---------------GMEPF-----HISK  206 (293)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------------TSEEE-----EGGG
T ss_pred             CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----C---------------CCeec-----Chhh
Confidence            35688999999 6999999999999999999999999866443321    1               22322     1245


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +.++++++|+||++...
T Consensus       207 l~~~l~~aDvVi~~~p~  223 (293)
T 3d4o_A          207 AAQELRDVDVCINTIPA  223 (293)
T ss_dssp             HHHHTTTCSEEEECCSS
T ss_pred             HHHHhcCCCEEEECCCh
Confidence            77888999999999753

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.86  E-value=0.0011  Score=68.24  Aligned_cols=106  Identities=17%  Similarity=0.176  Sum_probs=60.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|.|.||+|++|+.+++.|.++. .+|+++..+. .....+.+.+..+ .++..    ......+.+  .|+ |.+.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~-~~~~~----~~~~~~~~~--~~~-d~~~   74 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWI-EQGDI----PEEVQDLPI--VST-NYED   74 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCC-SSSSC----CHHHHTCBE--ECS-SGGG
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcc-ccccc----ccCCceeEE--eeC-CHHH
Confidence            35789999999999999999998775 5888886221 1111111100000 00000    000011222  233 3222


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                          ++++|+||.|.+.                ..+..++..+.++|+ ++|-.|+.
T Consensus        75 ----~~~vDvVf~atp~----------------~~s~~~a~~~~~aG~-~VId~s~~  110 (350)
T 2ep5_A           75 ----HKDVDVVLSALPN----------------ELAESIELELVKNGK-IVVSNASP  110 (350)
T ss_dssp             ----GTTCSEEEECCCH----------------HHHHHHHHHHHHTTC-EEEECSST
T ss_pred             ----hcCCCEEEECCCh----------------HHHHHHHHHHHHCCC-EEEECCcc
Confidence                4689999999863                135667888888887 57666664

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=96.86  E-value=0.0048  Score=68.21  Aligned_cols=107  Identities=17%  Similarity=0.175  Sum_probs=71.1

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ...+|+|.|+ |+||..+++.|+..|. ++++++.+.                   .|...+.+.++++           
T Consensus        16 ~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i-----------   83 (640)
T 1y8q_B           16 AGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF-----------   83 (640)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT-----------
T ss_pred             hcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH-----------
Confidence            3468999995 7899999999999995 888888653                   2344444444433           


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      .+.-+++.+..++.+.......+.++|+||+|..               |+..-..+-++|.++++ .+|+.++.
T Consensus        84 NP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~D---------------n~~aR~~ln~~c~~~~i-PlI~~g~~  142 (640)
T 1y8q_B           84 YPKANIVAYHDSIMNPDYNVEFFRQFILVMNALD---------------NRAARNHVNRMCLAADV-PLIESGTA  142 (640)
T ss_dssp             CTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCS---------------CHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             CCCCeEEEEecccchhhhhHhhhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence            1223566666777543323467899999999853               23344556677777775 56665443

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.0034  Score=64.60  Aligned_cols=42  Identities=24%  Similarity=0.182  Sum_probs=36.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||..+++.+...|. +|+++++++++.+.+
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            45679999995 9999999999988998 899999998887654

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.86  E-value=0.0049  Score=63.08  Aligned_cols=42  Identities=24%  Similarity=0.229  Sum_probs=36.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||..+++.+...|. +|+++++++++.+.+
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  212 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA  212 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            45679999996 9999999998888998 999999998776654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.86  E-value=0.0012  Score=67.29  Aligned_cols=96  Identities=10%  Similarity=0.034  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      .+.+|||+|| |.||..+++.+...|+ +|++++|++++.+.+.+                  .  ... ..|..+.+  
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~------------------l--a~~-v~~~~~~~~~  221 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP------------------Y--ADR-LVNPLEEDLL  221 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT------------------T--CSE-EECTTTSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH------------------h--HHh-ccCcCccCHH
Confidence            5678999999 9999999999989999 99999998876543211                  0  111 13554422  


Q ss_pred             -hHHHHh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          156 -QIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       156 -sl~~a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       .+.++. +++|+||+++|..               ......++.++..  ++||.++..
T Consensus       222 ~~~~~~~~~g~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~  264 (343)
T 2dq4_A          222 EVVRRVTGSGVEVLLEFSGNE---------------AAIHQGLMALIPG--GEARILGIP  264 (343)
T ss_dssp             HHHHHHHSSCEEEEEECSCCH---------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHHhcCCCCCEEEECCCCH---------------HHHHHHHHHHhcC--CEEEEEecC
Confidence             222222 3799999999841               1234445555443  388887753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.85  E-value=0.0067  Score=64.70  Aligned_cols=99  Identities=16%  Similarity=0.235  Sum_probs=76.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++|+|.| .|.||.+|++.| +++++|.++.++.++...+.+.+                 ++..++.||-+|.+.+.
T Consensus       234 ~~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l-----------------~~~~Vi~GD~td~~~L~  294 (461)
T 4g65_A          234 PYRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL-----------------ENTIVFCGDAADQELLT  294 (461)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC-----------------TTSEEEESCTTCHHHHH
T ss_pred             cccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC-----------------CCceEEeccccchhhHh
Confidence            356899999 688999999987 56799999999999988876532                 56789999999998876


Q ss_pred             H-HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 P-ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~-a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      + -++++|++|.+.+.           -++|+..+.    .|++.|+++.|-.-
T Consensus       295 ee~i~~~D~~ia~T~~-----------De~Ni~~~l----lAk~~gv~kvIa~v  333 (461)
T 4g65_A          295 EENIDQVDVFIALTNE-----------DETNIMSAM----LAKRMGAKKVMVLI  333 (461)
T ss_dssp             HTTGGGCSEEEECCSC-----------HHHHHHHHH----HHHHTTCSEEEEEC
T ss_pred             hcCchhhcEEEEcccC-----------cHHHHHHHH----HHHHcCCccccccc
Confidence            5 46889999998653           145554433    45678998877543

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.85  E-value=0.0027  Score=65.56  Aligned_cols=42  Identities=21%  Similarity=0.202  Sum_probs=35.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||...++.+...|+ +|+++++++++.+.+
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  223 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA  223 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            45779999998 9999999999999998 899888888776543

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.85  E-value=0.005  Score=63.46  Aligned_cols=75  Identities=16%  Similarity=0.229  Sum_probs=51.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|||+||+|.||..+++.+...|.+|+++++ .++.+.+    +++         |    .. .+  .|..+.+..
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~----~~l---------G----a~-~v--~~~~~~~~~  240 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV----RKL---------G----AD-DV--IDYKSGSVE  240 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH----HHT---------T----CS-EE--EETTSSCHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH----HHc---------C----CC-EE--EECCchHHH
Confidence            45689999999999999999999999999999884 4554433    222         1    11 22  354443322


Q ss_pred             HHHh--CCCcEEEEcccC
Q 009648          158 EPAL--GNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~--~~vD~VI~~Ag~  173 (530)
                      +++.  .++|+||+|+|.
T Consensus       241 ~~~~~~~g~D~vid~~g~  258 (375)
T 2vn8_A          241 EQLKSLKPFDFILDNVGG  258 (375)
T ss_dssp             HHHHTSCCBSEEEESSCT
T ss_pred             HHHhhcCCCCEEEECCCC
Confidence            2222  579999999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.84  E-value=0.0016  Score=65.59  Aligned_cols=75  Identities=15%  Similarity=0.193  Sum_probs=54.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|||+||+|.||...++.+...|.+|+++++.. +.+.    ++++         |.    . ++  .|..+.+.+
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~----~~~l---------Ga----~-~~--i~~~~~~~~  209 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAF----LKAL---------GA----E-QC--INYHEEDFL  209 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHH----HHHH---------TC----S-EE--EETTTSCHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHH----HHHc---------CC----C-EE--EeCCCcchh
Confidence            4578999999999999999999999999999988543 3322    2222         21    1 12  455554446


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      .+.++++|+||+|.|.
T Consensus       210 ~~~~~g~D~v~d~~g~  225 (321)
T 3tqh_A          210 LAISTPVDAVIDLVGG  225 (321)
T ss_dssp             HHCCSCEEEEEESSCH
T ss_pred             hhhccCCCEEEECCCc
Confidence            6777899999999873

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.84  E-value=0.0014  Score=66.81  Aligned_cols=97  Identities=20%  Similarity=0.255  Sum_probs=63.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC-Hh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~  155 (530)
                      .+.+|||+|| |.||..+++.+...  |++|+++++++++.+.+.+    +         |.     -++  .|..+ .+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----l---------Ga-----~~v--i~~~~~~~  228 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----L---------GA-----DYV--SEMKDAES  228 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----H---------TC-----SEE--ECHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----h---------CC-----CEE--eccccchH
Confidence            5679999999 99999999988888  9999999999887665432    2         10     112  23333 33


Q ss_pred             hHHHHhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          156 QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       156 sl~~a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      .+.++.+  ++|+||+++|..               ......++.++..  ++||.++..
T Consensus       229 ~~~~~~~g~g~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~  271 (344)
T 2h6e_A          229 LINKLTDGLGASIAIDLVGTE---------------ETTYNLGKLLAQE--GAIILVGME  271 (344)
T ss_dssp             HHHHHHTTCCEEEEEESSCCH---------------HHHHHHHHHEEEE--EEEEECCCC
T ss_pred             HHHHhhcCCCccEEEECCCCh---------------HHHHHHHHHhhcC--CEEEEeCCC
Confidence            3333332  699999999841               1233344444433  488887654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.83  E-value=0.0039  Score=63.25  Aligned_cols=75  Identities=16%  Similarity=0.215  Sum_probs=53.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+.+|||+|+ |.||...++.+...|.+|+++++++++.+.+.+    +         |     --.+  .|..+.   
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~~--i~~~~~~~~  223 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR----L---------G-----AEVA--VNARDTDPA  223 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T---------T-----CSEE--EETTTSCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----c---------C-----CCEE--EeCCCcCHH
Confidence            45789999997 889999999999999999999999887765432    2         2     1122  344432   


Q ss_pred             hhHHHHhCCCcEEEEcccC
Q 009648          155 VQIEPALGNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~  173 (530)
                      +.+.+..+++|+||.++|.
T Consensus       224 ~~~~~~~g~~d~vid~~g~  242 (340)
T 3s2e_A          224 AWLQKEIGGAHGVLVTAVS  242 (340)
T ss_dssp             HHHHHHHSSEEEEEESSCC
T ss_pred             HHHHHhCCCCCEEEEeCCC
Confidence            2233434589999999873

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.82  E-value=0.0031  Score=62.55  Aligned_cols=41  Identities=27%  Similarity=0.250  Sum_probs=38.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      +++|+|+|+ |++|+.++..|++.|.+|+++.|+.++.+.+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            789999995 99999999999999999999999999888765

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.81  E-value=0.0023  Score=63.91  Aligned_cols=68  Identities=15%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|+|+|+ |++|+.++..|.+.|. +|+++.|+.++.+.+.+                    .+..+  ++   +.
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~--------------------~~~~~--~~---~~  173 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG--------------------EFKVI--SY---DE  173 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT--------------------TSEEE--EH---HH
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH--------------------hcCcc--cH---HH
Confidence            46789999996 7899999999999998 99999999988776532                    22222  22   23


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +.+ + ++|+|||+...
T Consensus       174 l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          174 LSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             HTT-C-CCSEEEECSST
T ss_pred             HHh-c-cCCEEEECCcc
Confidence            334 4 89999999854

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.81  E-value=0.0053  Score=67.25  Aligned_cols=80  Identities=13%  Similarity=0.290  Sum_probs=58.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ...+|+|.| .|++|..+++.|+..| -++++++++.                   .|.+.+.+.++++           
T Consensus       325 ~~arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~i-----------  392 (615)
T 4gsl_A          325 KNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI-----------  392 (615)
T ss_dssp             HTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhh-----------
Confidence            467999999 6779999999999999 5888888754                   4667777777665           


Q ss_pred             CCCCCeEEE--EecC--------------CCHhhHHHHhCCCcEEEEccc
Q 009648          139 QPVEMLELV--ECDL--------------EKRVQIEPALGNASVVICCIG  172 (530)
Q Consensus       139 ~~~~~v~~v--~~Dl--------------~d~~sl~~a~~~vD~VI~~Ag  172 (530)
                        ++.+++.  ..++              .+.+.+.++++++|+||+|..
T Consensus       393 --NP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          393 --FPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             --CTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             --CCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence              2444444  3333              123446677899999999964

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.80  E-value=0.0013  Score=65.90  Aligned_cols=43  Identities=23%  Similarity=0.304  Sum_probs=37.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ++|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~   48 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLA   48 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence            346899998 8999999999999999999999999988776643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.80  E-value=0.0019  Score=62.83  Aligned_cols=67  Identities=16%  Similarity=0.239  Sum_probs=50.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|.|.| .|.+|+.+++.|.+.|++|.+++|+.++.+.+.+.+            |      +.+    .   .++.+
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------------g------~~~----~---~~~~~   56 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------------A------LPY----A---MSHQD   56 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------------T------CCB----C---SSHHH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------------C------CEe----e---CCHHH
Confidence            36899999 799999999999999999999999988776654321            1      110    1   23455


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++++|+||.+..
T Consensus        57 ~~~~~D~Vi~~v~   69 (259)
T 2ahr_A           57 LIDQVDLVILGIK   69 (259)
T ss_dssp             HHHTCSEEEECSC
T ss_pred             HHhcCCEEEEEeC
Confidence            6678999999974

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0018  Score=65.30  Aligned_cols=39  Identities=38%  Similarity=0.500  Sum_probs=35.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      +|||+||+|.||..+++.+...|++|+++++++++.+.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999999999999999999998877654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.79  E-value=0.0033  Score=65.35  Aligned_cols=42  Identities=21%  Similarity=0.218  Sum_probs=36.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      ..+++|+|+| .|.+|..+++.|...|++|++++|+..+.+.+
T Consensus       170 l~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          170 VPPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             ECCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3578999999 59999999999999999999999998776654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.78  E-value=0.0032  Score=65.98  Aligned_cols=76  Identities=18%  Similarity=0.282  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec--------
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD--------  150 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D--------  150 (530)
                      .+.+|+|+|+ |-+|..+++.|...|++|++++|+..+.+.+.+    +         |      ..++..+        
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~---------G------~~~~~~~~~~~~d~~  248 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----L---------G------AKFIAVEDEEFKAAE  248 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----T---------T------CEECCCCC-------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c---------C------Cceeecccccccccc
Confidence            4579999996 999999999999999999999999987666532    1         1      1222111        


Q ss_pred             --------CCC------HhhHHHHhCCCcEEEEcccCC
Q 009648          151 --------LEK------RVQIEPALGNASVVICCIGAS  174 (530)
Q Consensus       151 --------l~d------~~sl~~a~~~vD~VI~~Ag~~  174 (530)
                              +++      .+.+.++++++|+||+++...
T Consensus       249 ~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          249 TAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             ----------CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred             cccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence                    222      246888899999999997643

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.77  E-value=0.0048  Score=63.53  Aligned_cols=42  Identities=17%  Similarity=0.127  Sum_probs=36.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||..+++.+...|. +|+++++++++.+.+
T Consensus       190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            45679999995 9999999999988998 899999998887654

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.76  E-value=0.0011  Score=65.86  Aligned_cols=67  Identities=15%  Similarity=0.093  Sum_probs=49.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++++|.|.| .|.+|+.+++.|++.|++|++++|+.++.+.+.+                   .++.+    .   .++.
T Consensus         3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~----~---~~~~   55 (301)
T 3cky_A            3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-------------------QGAQA----C---ENNQ   55 (301)
T ss_dssp             -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-------------------TTCEE----C---SSHH
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCee----c---CCHH
Confidence            357899999 7999999999999999999999999877665432                   12221    1   2345


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ++++++|+||.+..
T Consensus        56 ~~~~~~D~vi~~vp   69 (301)
T 3cky_A           56 KVAAASDIIFTSLP   69 (301)
T ss_dssp             HHHHHCSEEEECCS
T ss_pred             HHHhCCCEEEEECC
Confidence            55667899999863

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=96.75  E-value=0.058  Score=54.02  Aligned_cols=89  Identities=22%  Similarity=0.352  Sum_probs=59.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ..+|+|.|++|..|+.+++.|.+.|++++..+ ++.+.                   + ....++.++       .++.+
T Consensus        13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V-nP~~~-------------------g-~~i~G~~vy-------~sl~e   64 (294)
T 2yv1_A           13 NTKAIVQGITGRQGSFHTKKMLECGTKIVGGV-TPGKG-------------------G-QNVHGVPVF-------DTVKE   64 (294)
T ss_dssp             TCCEEEETTTSHHHHHHHHHHHHTTCCEEEEE-CTTCT-------------------T-CEETTEEEE-------SSHHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHhCCCeEEEEe-CCCCC-------------------C-ceECCEeee-------CCHHH
Confidence            34688999999999999999999999844333 33210                   0 000122222       23555


Q ss_pred             HhC--CCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +.+  ++|++|.+..                -..+..+++.|.++|++.+|.+++
T Consensus        65 l~~~~~~Dv~ii~vp----------------~~~~~~~v~ea~~~Gi~~vVi~t~  103 (294)
T 2yv1_A           65 AVKETDANASVIFVP----------------APFAKDAVFEAIDAGIELIVVITE  103 (294)
T ss_dssp             HHHHHCCCEEEECCC----------------HHHHHHHHHHHHHTTCSEEEECCS
T ss_pred             HhhcCCCCEEEEccC----------------HHHHHHHHHHHHHCCCCEEEEECC
Confidence            555  8999998853                335778888899999976776654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.75  E-value=0.0022  Score=65.71  Aligned_cols=75  Identities=17%  Similarity=0.192  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+.+|||+|+ |.||..+++.+...|.+|+++++++++.+.+.+   ++         |.   .  ++  .|..+.+.+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~l---------Ga---~--~v--i~~~~~~~~~  239 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DL---------GA---D--DY--VIGSDQAKMS  239 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TS---------CC---S--CE--EETTCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---Hc---------CC---c--ee--eccccHHHHH
Confidence            5789999995 999999999888889999999999877655431   11         21   1  11  3555666666


Q ss_pred             HHhCCCcEEEEcccC
Q 009648          159 PALGNASVVICCIGA  173 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~  173 (530)
                      ++.+++|+||+++|.
T Consensus       240 ~~~~g~D~vid~~g~  254 (357)
T 2cf5_A          240 ELADSLDYVIDTVPV  254 (357)
T ss_dssp             HSTTTEEEEEECCCS
T ss_pred             HhcCCCCEEEECCCC
Confidence            666789999999985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.74  E-value=0.0041  Score=64.03  Aligned_cols=42  Identities=19%  Similarity=0.082  Sum_probs=36.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||..+++.+...|. +|+++++++++.+.+
T Consensus       194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            45679999995 9999999998888998 899999998887654

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.72  E-value=0.0021  Score=63.19  Aligned_cols=68  Identities=19%  Similarity=0.302  Sum_probs=51.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+ +|+|+|+ |..|+.++..|++.|. +|+++.|+.++.+.+.                    ..+..+  +   .+++
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la--------------------~~~~~~--~---~~~~  160 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD--------------------FPVKIF--S---LDQL  160 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC--------------------SSCEEE--E---GGGH
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH--------------------HHcccC--C---HHHH
Confidence            45 8999995 8899999999999998 9999999988766542                    112211  2   2446


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      .+++.++|+|||+...
T Consensus       161 ~~~~~~aDiVInatp~  176 (253)
T 3u62_A          161 DEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             HHHHHTCSEEEECSST
T ss_pred             HhhhcCCCEEEECCCC
Confidence            6778899999998753

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.70  E-value=0.0015  Score=64.84  Aligned_cols=65  Identities=17%  Similarity=0.229  Sum_probs=49.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|+| .|.+|..+++.|.+.|++|++++|+.++.+.+.+                   .++.+    .   .++.++
T Consensus         6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~----~---~~~~~~   58 (299)
T 1vpd_A            6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET----A---STAKAI   58 (299)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE----C---SSHHHH
T ss_pred             ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------CCCee----c---CCHHHH
Confidence            6899999 7999999999999999999999999887666532                   12221    1   224556


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.+..
T Consensus        59 ~~~~D~vi~~v~   70 (299)
T 1vpd_A           59 AEQCDVIITMLP   70 (299)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhCCCEEEEECC
Confidence            677999999975

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	530
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-16
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	1e-13
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-11
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	5e-09
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-09
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-08
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-08
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-08
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-06
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-06
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	8e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	6e-05
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-04
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	6e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.001
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.002
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	0.002
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	0.002
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	0.002
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.003
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	0.003

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (184), Expect = 3e-16
 Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 32/211 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG+ G  T+ + ++ G+ V   VR   R  +       +                
Sbjct: 7   AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVV--------------- 51

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
                 D+ +   ++  +     VI  +G           P  +  +  +N+V A     
Sbjct: 52  ----VGDVLQAADVDKTVAGQDAVIVLLGTRNDL-----SPTTVMSEGARNIVAAMKAHG 102

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
           V+  +  +S        P  +      V     +  + L  SGL Y  V P    ++P  
Sbjct: 103 VDKVVACTS--AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL- 159

Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
               T   T++ +       +S   +   + 
Sbjct: 160 ----TGAYTVTLDGRGPSRVISKHDLGHFML 186

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 69.4 bits (168), Expect = 1e-13
 Identities = 47/328 (14%), Positives = 88/328 (26%), Gaps = 56/328 (17%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G TG +G R V   + LG       R       +V ++ ++++       G      
Sbjct: 7   LIVGGTGYIGKRIVNASISLGHPTYVLFRP-----EVVSNIDKVQMLLYFKQLGA----- 56

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            +L+E  L+   ++                         G           LV+A   A 
Sbjct: 57  -KLIEASLDDHQRLVD---------ALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 106

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GMERP 260
                + S             L       + KRK   A+ A+ +PYT V      G    
Sbjct: 107 NIKRFLPSE-FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAG 165

Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQ------VAELLACMAKN--------------RS 300
           + A  + H +    +  ++G             V         +                
Sbjct: 166 SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI 225

Query: 301 LSYCKVVEVIAETT---APLT--PMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEE 355
           LS  +V+++    +           ++ LA +       K+    EK        +    
Sbjct: 226 LSQKEVIQIWERLSEQNLDKIYISSQDFLADM-------KDKSYEEKIVRCHLYQIFFRG 278

Query: 356 SSAPITEEPVQTKAKVTDPLSPYTSYED 383
                   P   +A    P   Y + + 
Sbjct: 279 DLYNFEIGPNAIEATKLYPEVKYVTMDS 306

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 59/327 (18%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GATG +G    +  L LG      VR    + N  ++    +L       G      
Sbjct: 7   LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA----QLLESFKASGA----- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
             +V   ++    +  A+ N  VVI  +G              +  ++  N++ A     
Sbjct: 58  -NIVHGSIDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVG 103

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG------- 256
                  S  G +        +     V   K K   A+ A G+PYT V           
Sbjct: 104 TVKRFFPSEFGNDV--DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR 161

Query: 257 -MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN--------------RSL 301
            + +          + +  +       V    +         +               +L
Sbjct: 162 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 221

Query: 302 SYCKVVEVIAETT-----APLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEES 356
           S  ++V +  +           P EE+L  I        ++  P     A S S+  +  
Sbjct: 222 SLNELVALWEKKIDKTLEKAYVPEEEVLKLI-------ADTPFPANISIAISHSIFVKGD 274

Query: 357 SAPITEEPVQTKAKVTDPLSPYTSYED 383
                  P   +A    P   YT+ ++
Sbjct: 275 QTNFEIGPAGVEASQLYPDVKYTTVDE 301

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 59.7 bits (143), Expect = 2e-10
 Identities = 49/282 (17%), Positives = 88/282 (31%), Gaps = 45/282 (15%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GATG+ G+  +R    +G  VRA V S++                    + +Q +  
Sbjct: 7   AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL----------------IAEELQAIPN 50

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
           + L +  L   V +   L   + +      S+            +    K+L DAA  A 
Sbjct: 51  VTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ---------AGDEIAIGKDLADAAKRAG 101

Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
                + SS+  +    P   + ++      K   E  +   GLP T V  G        
Sbjct: 102 TIQHYIYSSMPDHSLYGPWPAVPMWA----PKFTVENYVRQLGLPSTFVYAGIY------ 151

Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
               +N   S    LF  ++      E  A    +  L +      +           ++
Sbjct: 152 ----NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL------QI 201

Query: 324 LAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPV 365
               P +    + ++  E   P    +  S   +  +T   V
Sbjct: 202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQV 243

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.8 bits (130), Expect = 5e-09
 Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 18/254 (7%)

Query: 84  FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
            V GA+G+ G    ++L +    F  +  VRS Q  E +         D   A+      
Sbjct: 7   LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 66

Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 201
           + ++ +        +++P                    D   P ++D+   KN +DAA +
Sbjct: 67  QGIDALVILTSAVPKMKPGFDPTKGGRPEF-----IFEDGQYPEQVDWIGQKNQIDAAKV 121

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT 261
           A V H ++V S+G      P   L     +L+WKRKAE+ L  SG PYTI+R GG+    
Sbjct: 122 AGVKHIVVVGSMGGTNPDHPLNKLGNGN-ILVWKRKAEQYLADSGTPYTIIRAGGL---L 177

Query: 262 DAYKETHNITLSQEDTLF---GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
           D       + + ++D L       V    VAE+          +  K  ++ ++     T
Sbjct: 178 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTST 236

Query: 319 P---MEELLAKIPS 329
           P    + L +++ S
Sbjct: 237 PTKDFKALFSQVTS 250

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 55.2 bits (132), Expect = 7e-09
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 18/183 (9%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS  VR+LL   +        +   ++L  +  +  L    A+  +     
Sbjct: 4   LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DSLTYAGNRANLAPVDADPRL----- 57

Query: 144 LELVECDLEKRVQIEPALGNASVVICC--IGASEKEVFDITGPYRIDFQATKNLVDAATI 201
              V  D+     +   L     ++        ++ +   +     + Q T+ L+  A  
Sbjct: 58  -RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116

Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----KRKAEEALIA----SGLPYTIV 252
           A V   + VS+          +                K  ++    A     GL   I 
Sbjct: 117 AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176

Query: 253 RPG 255
           R  
Sbjct: 177 RCC 179

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 42/208 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVE 142
            + G  G VGS    +L+  G  V         R  N+   +     +            
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFE------------ 52

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
              L+  D+ + + IE        +     AS     + +  P    + +   T N++  
Sbjct: 53  ---LINHDVVEPLYIEV-----DQIYHL--ASPASPPNYMYNPIKTLKTNTIGTLNMLGL 102

Query: 199 ATIAKVNHFIMVSS----------LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---- 244
           A        ++ S+            +  +      +         KR AE    A    
Sbjct: 103 AKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 161

Query: 245 SGLPYTIVRPGGMERPTDAYKETHNITL 272
            G+   + R      P     +   ++ 
Sbjct: 162 EGVEVRVARIFNTFGPRMHMNDGRVVSN 189

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 52.4 bits (125), Expect = 5e-08
 Identities = 33/211 (15%), Positives = 53/211 (25%), Gaps = 44/211 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G  G +GS  VR ++K        +        L  +     L     +        
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNID------KLTYAGNLESLSDISESNRY----- 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDAA 199
                 D+    +I               A+E  V   ITGP      +   T  L++ A
Sbjct: 53  -NFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVA 111

Query: 200 -------TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----------------K 235
                     K N+F          +G       +   V L                  K
Sbjct: 112 RKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171

Query: 236 RKAEEALIA----SGLPYTIVRPGGMERPTD 262
             ++  + A     GLP  +        P  
Sbjct: 172 ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 52.1 bits (124), Expect = 8e-08
 Identities = 33/197 (16%), Positives = 52/197 (26%), Gaps = 30/197 (15%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A + G TG+ GS     LL+ G+ V    R         + V  +  D    N       
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKF---- 57

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
              L   DL     +   L            +   V      P     +D   T  L++A
Sbjct: 58  --HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEA 115

Query: 199 ATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA--- 244
                +     F   S+    G  +        P    + +    + K  A    +    
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA---VAKLYAYWITVNYRE 172

Query: 245 -SGLPYTIVRPGGMERP 260
             G+          E P
Sbjct: 173 SYGMYACNGILFNHESP 189

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 51.7 bits (122), Expect = 9e-08
 Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 13/139 (9%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V GA G V S  V +LL+ G++VR   RS  +  NL +                     
Sbjct: 15  LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-----------RF 63

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA-TIA 202
              V  D+ K+   +  +  A+ V                        T N + AA    
Sbjct: 64  ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE-VVTPAIGGTLNALRAAAATP 122

Query: 203 KVNHFIMVSSLGTNKFGFP 221
            V  F++ SS  +     P
Sbjct: 123 SVKRFVLTSSTVSALIPKP 141

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 47.3 bits (111), Expect = 2e-06
 Identities = 28/184 (15%), Positives = 59/184 (32%), Gaps = 23/184 (12%)

Query: 85  VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
           + G  G +GS  +  LLKL  +V          +  +  V+ +  + + +N         
Sbjct: 21  ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN--------F 72

Query: 145 ELVECDLE--KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
           + ++ D+          A  +  +    +G+  + + D       +     N++ AA  A
Sbjct: 73  KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132

Query: 203 KVNHFIMVSSLGTNKFGFPAAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTI 251
           KV  F   +S  ++ +G    +               + K   E          G     
Sbjct: 133 KVQSFTYAAS--SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190

Query: 252 VRPG 255
           +R  
Sbjct: 191 LRYF 194

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (111), Expect = 3e-06
 Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 29/199 (14%)

Query: 81  NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
           N+A + G TG+ GS     LL+ G+ V   VR          S    +++    N     
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVR-------RSSSFNTGRIEHLYKNPQAHI 54

Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLV 196
              ++L   DL     +   +            ++  V            +D   T  L+
Sbjct: 55  EGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114

Query: 197 DAATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALI-- 243
           DA     + +   F   S+    G  +        P    + + G    K  A   ++  
Sbjct: 115 DAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY-GA--AKLYAYWIVVNF 171

Query: 244 --ASGLPYTIVRPGGMERP 260
             A  L          E P
Sbjct: 172 REAYNLFAVNGILFNHESP 190

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 47.3 bits (111), Expect = 3e-06
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G +G +GS T  +LL+ G  V           +++  ++       L  K       
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE------RLGGKHP----- 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV-FDITGP---YRIDFQATKNLVDAA 199
              VE D+     +   L + ++      A  K V   +  P   Y  +   T  L+ A 
Sbjct: 53  -TFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAM 111

Query: 200 TIAKVNHFIMVS 211
             A V +FI  S
Sbjct: 112 RAANVKNFIFSS 123

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 46.0 bits (108), Expect = 6e-06
 Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 42/195 (21%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
           F+AG  G VGS   R+L + G                       + +  L +       +
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVELVLRT---------------RDELNLLDSR----AV 46

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
            +    +   +V +             +G               +     N++ AA    
Sbjct: 47  HDFFASERIDQVYLA---------AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND 97

Query: 204 VNHFIMVSSLGT--NKFGFPAAILNLFWGVLLW--------KRKAEEALIA----SGLPY 249
           VN  + + S          P A   L  G L          K    +   +     G  Y
Sbjct: 98  VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDY 157

Query: 250 TIVRPGGMERPTDAY 264
             V P  +  P D +
Sbjct: 158 RSVMPTNLYGPHDNF 172

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 45.5 bits (106), Expect = 8e-06
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 17/133 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + G  G +GS      L  G  +          +NL +      L    +         
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIV-------FDNLSRKGATDNLHWLSSLGNF----- 51

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLVDAA 199
            E V  D+  +  +   +       C   A +  +     +    + I+   T NL++A 
Sbjct: 52  -EFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAV 110

Query: 200 TIAKVNHFIMVSS 212
                N  I+ SS
Sbjct: 111 RQYNSNCNIIYSS 123

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.1 bits (100), Expect = 4e-05
 Identities = 28/224 (12%), Positives = 54/224 (24%), Gaps = 32/224 (14%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A + G TG+ GS     LL  G+ V   +R          +    +++    +       
Sbjct: 4   ALITGITGQDGSYLTEFLLGKGYEVHGLIR-------RSSNFNTQRINHIYIDPHNVNKA 56

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASE----------KEVFDITGPYRIDFQAT 192
           +++L   DL     +   +           A++              D+     +     
Sbjct: 57  LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116

Query: 193 KNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAEEALIA----S 245
                  +   V ++   SS        P       +        K  A    +      
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 246 GLPYTIVRP----GGMERPTDAYK----ETHNITLSQEDTLFGG 281
           GL                     +        I +  +  LF G
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG 220

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.0 bits (100), Expect = 6e-05
 Identities = 29/207 (14%), Positives = 48/207 (23%), Gaps = 42/207 (20%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            + GA G + S   R L   G  V A                    D +      + +  
Sbjct: 19  SITGAGGFIASHIARRLKHEGHYVIA-------------------SDWKKNEHMTEDMFC 59

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGA---SEKEVFDITGPYRIDFQATKNLVDAAT 200
            E    DL               V               + +     +   + N+++AA 
Sbjct: 60  DEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 119

Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAEEALIA-- 244
           I  +  F   SS     +     +      +                 K   EE      
Sbjct: 120 INGIKRFFYASS--ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177

Query: 245 --SGLPYTIVRPGGMERPTDAYKETHN 269
              G+   I R   +  P   +K    
Sbjct: 178 KDFGIECRIGRFHNIYGPFGTWKGGRE 204

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.3 bits (92), Expect = 5e-04
 Identities = 13/91 (14%), Positives = 23/91 (25%), Gaps = 4/91 (4%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRA----GVRSVQRAENLVQSVKQMKLDGELANKGIQ 139
            V G  G  G  T   L K  + V        R       L        +   ++     
Sbjct: 5   MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL 64

Query: 140 PVEMLELVECDLEKRVQIEPALGNASVVICC 170
             + +EL   D+     +  +  +       
Sbjct: 65  TGKSIELYVGDICDFEFLAESFKSFEPDSVV 95

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.0 bits (89), Expect = 6e-04
 Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 8/43 (18%)

Query: 71  TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
           TP +          +AGATG  G   +  +L      +    +
Sbjct: 1   TPKRV--------LLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 0.001
 Identities = 10/46 (21%), Positives = 17/46 (36%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK 128
            FV G TG  G      L  +G  V+    +     +L ++ +   
Sbjct: 11  VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD 56

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.4 bits (88), Expect = 0.001
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVR 112
           A V G TG+ G+   + LL+ G+RV   V 
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS TV ELL+ G+                   + ++   EL  + +     
Sbjct: 6   LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV----- 60

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV 178
            E  E D+  +  ++      S +     A  K V
Sbjct: 61  -EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV 94

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (86), Expect = 0.002
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)

Query: 84  FVAGATGKVGSRTVRELLKLGF--RVRAGVRS 113
           F+ GA+G+ G   ++E+L+ G   +V    R 
Sbjct: 18  FILGASGETGRVLLKEILEQGLFSKVTLIGRR 49

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 34/192 (17%), Positives = 52/192 (27%), Gaps = 11/192 (5%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
             V GA G +G        + G  V               S    K+  E+  +G + V 
Sbjct: 10  VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69

Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNL--VDAAT 200
             + VE   +         G   VV+   G      F        D     +L      T
Sbjct: 70  NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129

Query: 201 IAKVNHF--------IMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIASGLPYTI 251
            A  +H         IM +S       F  A  +    G+L            + +    
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNT 189

Query: 252 VRPGGMERPTDA 263
           + P    R T+ 
Sbjct: 190 IAPNAGSRMTET 201

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 41/205 (20%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A V GA+G +G+   R L++ G +V    R+V   E L    K     G           
Sbjct: 13  ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT---------- 62

Query: 143 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASE------------KEVFDI-- 181
            L    CDL     I               + I   G +             K++F++  
Sbjct: 63  -LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNV 121

Query: 182 TGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLF----WGVLLWKR- 236
                   +A +++ +        H I ++S+  ++   P ++ + +    + V      
Sbjct: 122 LALSICTREAYQSMKERN--VDDGHIININSMSGHR-VLPLSVTHFYSATKYAVTALTEG 178

Query: 237 -KAEEALIASGLPYTIVRPGGMERP 260
            + E     + +  T + PG +E  
Sbjct: 179 LRQELREAQTHIRATCISPGVVETQ 203

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (86), Expect = 0.003
 Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 16/130 (12%)

Query: 84  FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
            V G  G +GS TV EL++ G+           A+NL  S         +A   +     
Sbjct: 5   LVTGGAGYIGSHTVVELIENGYDCVV-------ADNLSNSTY-----DSVARLEVLTKHH 52

Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP----YRIDFQATKNLVDAA 199
           +   E DL  R  +E       +      A  K V + T      Y  +   T  L++  
Sbjct: 53  IPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELM 112

Query: 200 TIAKVNHFIM 209
               V+ F+ 
Sbjct: 113 QQYNVSKFVF 122

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 25/196 (12%)

Query: 83  AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
           A V G    +G   V+ELL+LG  V    R ++R ++    ++      + A        
Sbjct: 15  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR------- 67

Query: 143 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVFDITGP------YRIDF 189
            +  ++C++    ++           G  + ++   G       +             + 
Sbjct: 68  -VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNL 126

Query: 190 QATKNLVDAATIAKV--NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIAS 245
             T  +  A   + +  +   +V+ +   K GFP A+ +     GV    +        S
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 186

Query: 246 GLPYTIVRPGGMERPT 261
           G+    V PG +   T
Sbjct: 187 GIRINCVAPGVIYSQT 202

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	530
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.98
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.97
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.96
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.96
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.96
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.96
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.96
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.96
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.95
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.95
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.94
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.94
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.94
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.93
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.93
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.93
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.92
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.92
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.92
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.91
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.91
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.9
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.9
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.9
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.89
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.89
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.89
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.89
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.89
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.89
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.89
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.89
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.89
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.89
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.89
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.89
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.89
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.89
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.88
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.88
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.88
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.88
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.88
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.88
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.88
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.88
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.88
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.88
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.88
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.88
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.87
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.87
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.87
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.87
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.86
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.86
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.86
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.86
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.86
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.85
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.85
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.85
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.84
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.84
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.83
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.83
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.83
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.82
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.82
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.82
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.8
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.8
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.78
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.78
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.78
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.76
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.76
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.74
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.72
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.72
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.71
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.68
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.64
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.63
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.6
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.6
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.34
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.62
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.59
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.5
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.47
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.4
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.34
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.28
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.24
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.22
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.19
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.16
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.16
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.15
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.11
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.1
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.09
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.09
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.08
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.06
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.98
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.9
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.87
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.86
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.81
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.8
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.75
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.75
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.73
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.72
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.72
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.63
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.61
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.61
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.6
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.54
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.53
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.5
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.46
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.42
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.4
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.39
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.39
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.37
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.36
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.35
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.35
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.3
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.25
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.24
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.21
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.18
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.18
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.14
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.13
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.12
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.09
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.05
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.04
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.04
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.02
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.97
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.97
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.96
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.88
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.86
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.84
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.84
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.82
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.77
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	96.65
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.64
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.61
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.52
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.51
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.5
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.49
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.45
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.42
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.38
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.37
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.37
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.37
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.35
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.28
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.25
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.23
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.22
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.12
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.1
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.03
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.84
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.79
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.7
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.65
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.64
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	95.6
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.47
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.45
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.44
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.36
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.32
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.21
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.17
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.16
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.09
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.06
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.06
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.05
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	94.98
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.9
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	94.89
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.72
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.71
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.67
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	94.63
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.54
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.54
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.54
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.43
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.37
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.29
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.19
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.0
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.0
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.99
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.91
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.84
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.83
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.68
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.67
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.65
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.65
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.54
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.46
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.38
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.34
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.34
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.23
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.21
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.18
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.98
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.83
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.68
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.48
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	92.42
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.39
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.38
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	92.27
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.23
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.19
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.86
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.82
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.73
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	91.56
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.55
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.45
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.23
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	91.1
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.08
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.06
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	90.98
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	90.96
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.89
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.84
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	90.8
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.8
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.78
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.59
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.51
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.22
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.16
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	89.98
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.9
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	89.88
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.8
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	89.64
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.1
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	89.01
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.89
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.87
d1jyea_	271	Lac-repressor (lacR) core (C-terminal domain) {Esc	88.74
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.02
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.98
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	87.84
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	87.81
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	87.4
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.33
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	87.21
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	86.69
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	86.65
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.34
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	86.14
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	86.1
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	85.84
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.41
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.32
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.21
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	85.2
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	85.11
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	85.08
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	84.9
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.87
d1uwva2	358	rRNA (Uracil-5-)-methyltransferase RumA, catalytic	84.87
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	84.84
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	84.79
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	84.66
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	84.56
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	84.4
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	84.33
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	84.07
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	83.99
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	83.61
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	83.55
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	83.4
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	83.34
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.31
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	83.28
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	83.1
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.88
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.81
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	82.67
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	82.59
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	82.44
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	82.1
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.09
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.94
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	81.71
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.65
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	81.14
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.1
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	81.08
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	80.69
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.64
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	80.17

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=5e-32  Score=278.87  Aligned_cols=235  Identities=14%  Similarity=0.020  Sum_probs=178.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-----HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      |+|||||||||||++||++|+++||+|++++|....     ...+...             ......+++++++|++|.+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~Dl~d~~   68 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-------------PHTCNPKFHLHYGDLSDTS   68 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh-------------hhhcCCCeEEEEeecCCHH
Confidence            689999999999999999999999999999996432     2222110             1123468999999999999


Q ss_pred             hHHHHhCCC--cEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCC---EEEEEcCCCccCCC-----Cccc
Q 009648          156 QIEPALGNA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKFG-----FPAA  223 (530)
Q Consensus       156 sl~~a~~~v--D~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~---r~V~iSS~~v~~~~-----~~~~  223 (530)
                      .+.++++++  |+|||+|+...  ....++...+++|+.||.||+++|++.+++   ||||+||..++...     .++.
T Consensus        69 ~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          69 NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence            999999854  99999998643  334455677999999999999999987654   79999998774221     2344


Q ss_pred             cccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCC
Q 009648          224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVS  284 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~  284 (530)
                      +.+|.+.|+.+|+++|++++.    .+++++++||+++|||+.....               .......+.+....+++|
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~  228 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence            567888999999999998874    6899999999999999643211               011111122233346899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       285 v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ++|+|++++.++++..   +++|||++++..++.++++++.+.+|..
T Consensus       229 v~D~~~a~~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~~  272 (357)
T d1db3a_         229 AKDYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIK  272 (357)
T ss_dssp             HHHHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred             echHHHHHHHHHhCCC---CCeEEECCCCceehHHHHHHHHHHhCCc
Confidence            9999999999988754   7899999999999999999999999854

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-30  Score=243.65  Aligned_cols=203  Identities=17%  Similarity=0.167  Sum_probs=164.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .++||+||||||+||++|+++|+++||+|++++|+.++...                   ....+++++.+|+.|.+++.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------------------~~~~~~~~~~gD~~d~~~l~   62 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------------------EGPRPAHVVVGDVLQAADVD   62 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------------------SSCCCSEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------------------ccccccccccccccchhhHH
Confidence            46789999999999999999999999999999999876432                   12367999999999999999


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA  238 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~  238 (530)
                      ++++++|+|||++|....     ....+++..++++++++|++++++|||++||.++..  ...........|...|..+
T Consensus        63 ~al~~~d~vi~~~g~~~~-----~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~--~~~~~~~~~~~~~~~~~~~  135 (205)
T d1hdoa_          63 KTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW--DPTKVPPRLQAVTDDHIRM  135 (205)
T ss_dssp             HHHTTCSEEEECCCCTTC-----CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CTTCSCGGGHHHHHHHHHH
T ss_pred             HHhcCCCEEEEEeccCCc-----hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccC--CCccccccccccchHHHHH
Confidence            999999999999986422     233467889999999999999999999999987632  2222234456789999999


Q ss_pred             HHHHHHCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC
Q 009648          239 EEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE  312 (530)
Q Consensus       239 E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~  312 (530)
                      |+++++.|++||||||+++++...    .....+.........+|+++|||++++.+|+++. ..|+.+.+...
T Consensus       136 e~~l~~~~~~~tiirp~~~~~~~~----~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~s~~  204 (205)
T d1hdoa_         136 HKVLRESGLKYVAVMPPHIGDQPL----TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSHQ  204 (205)
T ss_dssp             HHHHHHTCSEEEEECCSEEECCCC----CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEECC
T ss_pred             HHHHHhcCCceEEEecceecCCCC----cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC-CCCEEEecCCc
Confidence            999999999999999999986422    2223333334445567999999999999999987 56888888764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.97  E-value=1.1e-29  Score=260.55  Aligned_cols=236  Identities=15%  Similarity=0.027  Sum_probs=185.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .|.++|+||||||+||||++|+++|+++||+|++++|.......                   ......++..+|+.|.+
T Consensus        11 ~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-------------------~~~~~~~~~~~D~~~~~   71 (363)
T d2c5aa1          11 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-------------------EDMFCDEFHLVDLRVME   71 (363)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-------------------GGGTCSEEEECCTTSHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-------------------hhcccCcEEEeechhHH
Confidence            35678899999999999999999999999999999876532110                   11245688889999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCCc---cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC------------
Q 009648          156 QIEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------------  220 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~---~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~------------  220 (530)
                      .+.++++++|+|||+|+.....   .......+.+|+.++.+|+++|++++++|||++||..++....            
T Consensus        72 ~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~  151 (363)
T d2c5aa1          72 NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKES  151 (363)
T ss_dssp             HHHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             HHHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccc
Confidence            9999999999999999765332   2344567889999999999999999999999999987643211            


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccc----------------eeecccCcccC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN----------------ITLSQEDTLFG  280 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~----------------~~~~~~~~~~~  280 (530)
                      +..+..+.+.|+.+|.++|++++.    .|+++++||++.+||+.+.......                ......+....
T Consensus       152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  231 (363)
T d2c5aa1         152 DAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  231 (363)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             cCCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE
Confidence            112346678899999999998863    6999999999999999764321111                11111223344


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      +++|++|+++++..++++..   +++||++++...++.++.+++.++++....
T Consensus       232 d~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~  281 (363)
T d2c5aa1         232 SFTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLP  281 (363)
T ss_dssp             CCEEHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred             EEeehhHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCc
Confidence            68999999999999998764   789999999999999999999999987653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=2.3e-29  Score=256.19  Aligned_cols=249  Identities=13%  Similarity=0.041  Sum_probs=192.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.|+|||||||||||++|+++|+++||+|++++|...........+....        ......+++++.+|+.|...+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d~~d~~~~   85 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLV--------SEKQWSNFKFIQGDIRNLDDC   85 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHS--------CHHHHTTEEEEECCTTSHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhh--------hhcccCCeeEEeecccccccc
Confidence            356799999999999999999999999999999974322111111111110        001126899999999999999


Q ss_pred             HHHhCCCcEEEEcccCCC--CccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhH
Q 009648          158 EPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~--~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      .....+.++|||+++...  ....+....+++|+.|+.+|+++|.++++++|||+||..++...     .++.+.++.+.
T Consensus        86 ~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  165 (341)
T d1sb8a_          86 NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP  165 (341)
T ss_dssp             HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred             ccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCc
Confidence            999999999999987542  23345566789999999999999999999999999998774332     33456778899


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccccc---------------ceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH---------------NITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~---------------~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|..+|++++.    .+++++++||+.|||+++......               .+.+...+....+++|++|+|++
T Consensus       166 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a  245 (341)
T d1sb8a_         166 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA  245 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchh
Confidence            99999999998863    689999999999999875432211               12222233344468999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP  334 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~  334 (530)
                      +..++.......+++||++.+...++.++++++.+.++.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~  288 (341)
T d1sb8a_         246 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVS  288 (341)
T ss_dssp             HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCC
T ss_pred             hhhhhhccccccceeeeecccccchHHHHHHHHHHHhcccccc
Confidence            9999987654568899999999999999999999998876543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.96  E-value=9.1e-30  Score=257.39  Aligned_cols=235  Identities=15%  Similarity=0.063  Sum_probs=183.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEE------EEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVR------AGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~------~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      |+|||||||||||++|++.|+++|++|+      .+++...  +...+.               ......+++++.+|+.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~d~~   65 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA---------------PVDADPRLRFVHGDIR   65 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG---------------GGTTCTTEEEEECCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh---------------hhhcCCCeEEEEeccc
Confidence            6899999999999999999999998554      4433211  111000               0122478999999999


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----Cccccc
Q 009648          153 KRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL  225 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~  225 (530)
                      +...+...+..+|+|||+|+....  ...+....+++|+.|+.+|+++|.+.++++|||+||..++...     .++.+.
T Consensus        66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~  145 (322)
T d1r6da_          66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL  145 (322)
T ss_dssp             CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCC
Confidence            999999999999999999975432  2234456789999999999999999999999999998774322     344556


Q ss_pred             cchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCHHHHHH
Q 009648          226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .+.+.|+.+|..+|.+++    +.++++++||++.||||++...           ....+.+...+....+++|++|+|+
T Consensus       146 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~  225 (322)
T d1r6da_         146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (322)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHH
Confidence            788899999999999886    3699999999999999976431           1122333333334446899999999


Q ss_pred             HHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       291 ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      +++.+++++.  .+++||++++...++.++.+.+.++++...
T Consensus       226 ai~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~  265 (322)
T d1r6da_         226 GIALVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGADW  265 (322)
T ss_dssp             HHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred             HHHHHHhCCC--CCCeeEEeecccchhHHHHHHHHHHhCCCc
Confidence            9999999876  488999999999999999999999998754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-30  Score=262.09  Aligned_cols=230  Identities=13%  Similarity=0.090  Sum_probs=174.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +|+||||||+||||++|+++|+++|++|++++|.... ...+.               ......++++...|+.     +
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---------------~~~~~~~~d~~~~~~~-----~   60 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---------------HWIGHENFELINHDVV-----E   60 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---------------GGTTCTTEEEEECCTT-----S
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---------------HhcCCCceEEEehHHH-----H
Confidence            4789999999999999999999999999999874321 11110               0112345666666654     4


Q ss_pred             HHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----c-----ccccc
Q 009648          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----P-----AAILN  226 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~-----~~~~~  226 (530)
                      .++.++|+|||||+....  ...+....+++|+.++.+|+++|++.++ +|||+||..++....     +     ..+..
T Consensus        61 ~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~  139 (312)
T d2b69a1          61 PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIG  139 (312)
T ss_dssp             CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred             HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCC
Confidence            456789999999986542  2345566789999999999999999987 899999987743221     1     12346


Q ss_pred             chhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccc-------------ceeecccCcccCCCCCHHHHH
Q 009648          227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH-------------NITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~-------------~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      +.+.|+.+|.++|.+++    ..|+++++||++.||||++......             .+.+...+....+++|++|+|
T Consensus       140 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~  219 (312)
T d2b69a1         140 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV  219 (312)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHH
Confidence            78899999999999986    3699999999999999976542211             122222333334689999999


Q ss_pred             HHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       290 ~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ++++.+++...   +++||++++...++.++.+++.++++....
T Consensus       220 ~~~~~~~~~~~---~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~  260 (312)
T d2b69a1         220 NGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSE  260 (312)
T ss_dssp             HHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHhhcc---CCceEecCCcccchhhHHHHHHHHhCCCCc
Confidence            99999987664   789999999999999999999999987543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=7e-29  Score=252.71  Aligned_cols=240  Identities=15%  Similarity=0.085  Sum_probs=179.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|+++|++|++++|-...........+..            ...+++++++|++|.+.+.++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~l~~~   68 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL------------GGKHPTFVEGDIRNEALMTEI   68 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH------------HTSCCEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh------------cCCCCEEEEeecCCHHHHHHH
Confidence            67999999999999999999999999999987332211111111111            126899999999999999999


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc------cccccchhH
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------AAILNLFWG  230 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~------~~~~~~~~~  230 (530)
                      ++  ++|+|||+|+....  ...+....+++|+.|+.+|+++|++.++++||++||..++.....      .....+.+.
T Consensus        69 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~  148 (338)
T d1udca_          69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP  148 (338)
T ss_dssp             HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred             HhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcch
Confidence            97  79999999986432  223456779999999999999999999999999999877543321      123467888


Q ss_pred             HHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCccccc--------c--------------cceeeccc------Cc
Q 009648          231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE--------T--------------HNITLSQE------DT  277 (530)
Q Consensus       231 Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~--------~--------------~~~~~~~~------~~  277 (530)
                      |+.+|..+|+++.+     .+++++++|++++||++.....        .              ..+.+.+.      +.
T Consensus       149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~  228 (338)
T d1udca_         149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSS
T ss_pred             HHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCC
Confidence            99999999998874     5899999999999998643210        0              01111111      12


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ...+++|++|++.++..++... ....+++||+++....++.++.+++.+++|...
T Consensus       229 ~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~  284 (338)
T d1udca_         229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV  284 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCC
T ss_pred             ceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCC
Confidence            2235799999998887766532 113578999999999999999999999998654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.96  E-value=8.7e-30  Score=262.66  Aligned_cols=237  Identities=12%  Similarity=0.064  Sum_probs=179.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|+++|+++|++|+++.++....... +.+           .......+++++++|++|...+..+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~-~~~-----------~~~~~~~~~~~~~~Dl~d~~~l~~~   68 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-ESL-----------SDISESNRYNFEHADICDSAEITRI   68 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-GGG-----------TTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH-HHH-----------HhhhhcCCcEEEEccCCCHHHHHHH
Confidence            5899999999999999999999999876655543211110 000           1122347899999999999999998


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcC---------CCEEEEEcCCCccCCCC-------
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK---------VNHFIMVSSLGTNKFGF-------  220 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~g---------v~r~V~iSS~~v~~~~~-------  220 (530)
                      ++  ++|+|||||+....  ...++...+++|+.++.+++++|++.+         +++||++||..++....       
T Consensus        69 ~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          69 FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             HHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence            86  58999999986432  234566789999999999999998764         45999999987743221       


Q ss_pred             --------ccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-----------ccceeecccCc
Q 009648          221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDT  277 (530)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-----------~~~~~~~~~~~  277 (530)
                              +.....+.+.|+.+|.++|.+++.    .|+++++||++.||||++....           ...+.+...+.
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence                    123356778899999999999874    7999999999999999764311           11222222333


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ....++|++|+|++++.++++..  .+++|||++++..++.++.+.+.+.++..
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~--~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~  280 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEI  280 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCC--CCCeEEECCCCCcchHHHHhHhhhhcccc
Confidence            33457999999999999999876  48899999999999999999988876543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.96  E-value=3.6e-28  Score=247.97  Aligned_cols=241  Identities=18%  Similarity=0.097  Sum_probs=180.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++||||||+||||++|+++|+++|++|++++|+.++...+.......           .......++.+|+.|.+.
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~   76 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-----------YPGRFETAVVEDMLKQGA   76 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----------STTTEEEEECSCTTSTTT
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-----------ccccccEEEeccccchhh
Confidence            456899999999999999999999999999999999988776655432221           111344567799999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcCCCccCCCC---------------
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF---------------  220 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS~~v~~~~~---------------  220 (530)
                      +.+++.++|+|+|+++..... .+....+++|+.|+.+++++|.+. ++++|||+||.++..++.               
T Consensus        77 ~~~~~~~~~~v~~~a~~~~~~-~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~  155 (342)
T d1y1pa1          77 YDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL  155 (342)
T ss_dssp             TTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred             hhhhcccchhhhhhccccccc-ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccc
Confidence            999999999999999865433 344566789999999999999986 799999999975432211               


Q ss_pred             ----------ccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccccc----e---------e
Q 009648          221 ----------PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHN----I---------T  271 (530)
Q Consensus       221 ----------~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~~~----~---------~  271 (530)
                                +..+.++.+.|+.+|+.+|.+++.      .+++++++||+++|||.........    +         .
T Consensus       156 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~  235 (342)
T d1y1pa1         156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS  235 (342)
T ss_dssp             HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC
T ss_pred             ccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcC
Confidence                      112345677899999999987653      3577899999999998532211100    0         0


Q ss_pred             ecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          272 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       272 ~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      ..........++|++|+|++++.+++++.  .++.|+++++...++.++++++.+++...
T Consensus       236 ~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~~~t~~eia~~i~k~~p~~  293 (342)
T d1y1pa1         236 PALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             cccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCCceEHHHHHHHHHHHcCCC
Confidence            00011122347999999999999999876  35556788888899999999999987543

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.95  E-value=1.6e-28  Score=250.63  Aligned_cols=241  Identities=15%  Similarity=0.039  Sum_probs=182.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|||||||||||++|+++|+++|++|.+++|+..........     +       ......+++++.+|+.|.+.+..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~-----~-------~~~~~~~i~~~~~Di~d~~~~~~   69 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN-----L-------EAILGDRVELVVGDIADAELVDK   69 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-----T-------GGGCSSSEEEEECCTTCHHHHHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHH-----H-------HHhhcCCeEEEEccCCCHHHHHH
Confidence            68999999999999999999999998877666532100000000     0       00123689999999999999999


Q ss_pred             HhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----------------C
Q 009648          160 ALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------------F  220 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----------------~  220 (530)
                      ++.++|.|+|+|+....  ...+....+++|+.|+.+|+++|...+. ++|++||..++...                 .
T Consensus        70 ~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~  148 (346)
T d1oc2a_          70 LAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFT  148 (346)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBC
T ss_pred             HHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccc
Confidence            99999999999986533  2245567789999999999999999986 89999987663210                 1


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccc-----------cccceeecccCcccCCCCCH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~-----------~~~~~~~~~~~~~~~g~V~v  285 (530)
                      +.....+.+.|+.+|.++|.+++.    .|+++++|||+.||||++...           ....+.+...+.....++|+
T Consensus       149 e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v  228 (346)
T d1oc2a_         149 AETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHT  228 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEH
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccch
Confidence            112345667899999999988863    689999999999999875321           11122233333444568999


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK  335 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~~~  335 (530)
                      +|+|++++.+++++.  .++.||++++...++.++.+.+.+.++......
T Consensus       229 ~D~a~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  276 (346)
T d1oc2a_         229 NDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAY  276 (346)
T ss_dssp             HHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCS
T ss_pred             hhHHHHHHHHHhhcc--cCccccccccccccchHHHHHHHHHhCCCCcce
Confidence            999999999998876  589999999999999999999999988765443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=9.3e-28  Score=228.08  Aligned_cols=227  Identities=26%  Similarity=0.345  Sum_probs=175.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCe--EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~--V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|||||||||||++|++.|+++||+  |+.++|++++...+                    ..+++++.+|+.|.+.
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------------------~~~~~~~~~d~~~~~~   61 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------------GGEADVFIGDITDADS   61 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------------TCCTTEEECCTTSHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------------------cCCcEEEEeeeccccc
Confidence            3579999999999999999999999965  66678988765442                    2578999999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCC---------------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc
Q 009648          157 IEPALGNASVVICCIGASEK---------------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~---------------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +.++++++|+|||+++....               ..........+|+.++.++++.+...+.+++.+.|+........+
T Consensus        62 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~  141 (252)
T d2q46a1          62 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP  141 (252)
T ss_dssp             HHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG
T ss_pred             cccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc
Confidence            99999999999999985321               112234557889999999999999999999999998776443322


Q ss_pred             cccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCcccCCCcccccccceeeccc---CcccCCCCCHHHHHHHHHHHHhC
Q 009648          222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQE---DTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~---~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      . .......|...+...+.+....|++++++||+++||+......   +.....   .....++||++|||++++.+|++
T Consensus       142 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         142 L-NKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             G-GGGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC---EEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred             c-ccccccchhhhhhhhhhhhhcccccceeecceEEECCCcchhh---hhhccCcccccCCCCeEEHHHHHHHHHHHhCC
Confidence            2 1233445788888888888999999999999999999754321   111111   12224679999999999999998


Q ss_pred             CCCCCCcEEEEeCCC---CCChhHHHHHHHhcCCC
Q 009648          299 RSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       299 ~~~~~g~vynv~~~~---~~t~~~i~ell~~v~g~  330 (530)
                      +. ..|++|||+++.   ..+..+|.+++.++.++
T Consensus       218 ~~-~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         218 EE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             GG-GTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             cc-ccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence            87 578999999754   34678899999888765

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.2e-27  Score=243.11  Aligned_cols=237  Identities=14%  Similarity=0.127  Sum_probs=178.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH-
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE-  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~-  158 (530)
                      |+|||||||||||++|+++|+++| ++|+++++...+...+                  ....+++++.+|+++.+.+. 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~------------------~~~~~~~~i~~Di~~~~~~~~   62 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------------LNHPHFHFVEGDISIHSEWIE   62 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG------------------TTCTTEEEEECCTTTCSHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh------------------ccCCCeEEEECccCChHHHHH
Confidence            589999999999999999999999 5899999876543332                  12478999999998875544 


Q ss_pred             HHhCCCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCc------------ccc
Q 009648          159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------------AAI  224 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~------------~~~  224 (530)
                      .+++++|+|||+|+....  ...+....+++|+.|+.+++++|.+.++ +++++||..++.....            ...
T Consensus        63 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~  141 (342)
T d2blla1          63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV  141 (342)
T ss_dssp             HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred             HHHhCCCccccccccccccccccCCccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            477889999999986532  2233345689999999999999999987 6678888655332211            112


Q ss_pred             ccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc-------------------ccceeecccCcccCC
Q 009648          225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTLFGG  281 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~-------------------~~~~~~~~~~~~~~g  281 (530)
                      ..+...|+.+|..+|++++.    .|++++++|++.+||+......                   ...+.+...+.....
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence            34667899999999999864    6999999999999998543211                   111222333344446


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC-CCChhHHHHHHHhcCCCCCCCCc
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAEPKE  336 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~-~~t~~~i~ell~~v~g~~~~~~~  336 (530)
                      ++|++|+|++++.+++++. ...+++|||++++ ..++.++++++.++++.......
T Consensus       222 ~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~  278 (342)
T d2blla1         222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH  278 (342)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGG
T ss_pred             ecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccc
Confidence            8999999999999998753 2458999998654 46999999999999887664433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1.5e-27  Score=239.68  Aligned_cols=236  Identities=13%  Similarity=-0.011  Sum_probs=178.0

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||||||||++|+++|+++||+|++++|.......  ..+..+           ...++++++.+|+.|...+.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~-----------~~~~~~~~~~~Dl~d~~~~~~~   67 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLREL-----------GIEGDIQYEDGDMADACSVQRA   67 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHT-----------TCGGGEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHh-----------cccCCcEEEEccccChHHhhhh
Confidence            689999999999999999999999999999997642110  111111           1236899999999999999888


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCccCCC-----CccccccchhH
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG-----FPAAILNLFWG  230 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v~~~~-----~~~~~~~~~~~  230 (530)
                      +.  ..++++|+|+....  ...+....+++|+.|+.+++++|++.+++ +||+.||..++...     .++.+..+.+.
T Consensus        68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~  147 (321)
T d1rpna_          68 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSP  147 (321)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             hccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccCh
Confidence            75  45788888875432  22334566889999999999999998865 67777776553221     23445667889


Q ss_pred             HHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCCCHHHHHHH
Q 009648          231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       231 Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                      |+.+|.++|++++.    .+++++++|++.+|||......               .........+....+++|++|+|++
T Consensus       148 Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~  227 (321)
T d1rpna_         148 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA  227 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHH
Confidence            99999999998864    7899999999999999643211               0111111222333457999999999


Q ss_pred             HHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       292 i~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                      ++.+++++.   ++.||++++...++.++.+.+.+.++...
T Consensus       228 ~~~~~~~~~---~~~~ni~~~~~~s~~~~~~~~~~~~~~~~  265 (321)
T d1rpna_         228 MWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDY  265 (321)
T ss_dssp             HHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred             HHHHHhcCC---cCCceecccccceehhhhHHHHHHhCCCc
Confidence            999999875   67899999999999999999999988654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.9e-27  Score=239.17  Aligned_cols=236  Identities=14%  Similarity=-0.035  Sum_probs=176.4

Q ss_pred             CEE-EEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-----HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           81 NLA-FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        81 k~V-LVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      |+| |||||+||||++|+++|+++||+|++++|..+.     .+.+....            ......+++++.+|++|.
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~Dl~d~   68 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP------------QAHIEGNMKLHYGDLTDS   68 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhch------------hhhccCCcEEEEeecCCc
Confidence            467 999999999999999999999999999996532     11111000            001135789999999999


Q ss_pred             hhHHHHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCC---CEEEEEcCCCccCCC-----Ccc
Q 009648          155 VQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPA  222 (530)
Q Consensus       155 ~sl~~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv---~r~V~iSS~~v~~~~-----~~~  222 (530)
                      +.+..++.  ++++|+|+++....  ...+....+++|+.|+.+|+++|+++++   .+|||+||..++...     .++
T Consensus        69 ~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          69 TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC
Confidence            99999985  56899999875422  2233445579999999999999998865   489999998774221     244


Q ss_pred             ccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCccccc---------------ccceeecccCcccCCCC
Q 009648          223 AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQV  283 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~---------------~~~~~~~~~~~~~~g~V  283 (530)
                      .+.++.+.|+.+|.++|++++.    .+++++++|++.+|||......               ...+.....+....+++
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence            5567888999999999999864    6999999999999999643211               11112222333445789


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR  331 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~  331 (530)
                      |++|+|++++.++++..   .+.|++......+..++.+.+....+..
T Consensus       229 ~v~D~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKT  273 (347)
T ss_dssp             EHHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCC
T ss_pred             EecHHHHHHHHHhhcCC---Cccceeccccccccchhhhhhhhhhcce
Confidence            99999999999999875   5678888888888888888888887764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=7e-27  Score=238.44  Aligned_cols=240  Identities=15%  Similarity=0.106  Sum_probs=176.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+|||||||||||++|+++|+++|++|++++|.... ..... .....            ...+++++.+|++|.+.+..
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~-~~~~~------------~~~~v~~~~~Dl~d~~~l~~   68 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVA-RLEVL------------TKHHIPFYEVDLCDRKGLEK   68 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHH-HHHHH------------HTSCCCEEECCTTCHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHH-hHHhh------------cccCCeEEEeecCCHHHHHH
Confidence            579999999999999999999999999999864321 11111 11110            12679999999999999999


Q ss_pred             HhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC---------Ccccccc
Q 009648          160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAILN  226 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~---------~~~~~~~  226 (530)
                      ++.  ++|+|||+|+....  ...+....+.+|+.++.+|+++|++.+++|||++||..++...         .++....
T Consensus        69 ~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          69 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             HHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCC
Confidence            886  78999999986532  2234456788999999999999999999999999998774321         1233456


Q ss_pred             chhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccc--------cc--------------eeecccC--
Q 009648          227 LFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET--------HN--------------ITLSQED--  276 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~--------~~--------------~~~~~~~--  276 (530)
                      +.+.|+.+|.++|+++++      .+++++++|++.+||+.......        ..              +.+.+.+  
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~  228 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD  228 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred             CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence            778899999999998863      57899999999999874321100        00              1111111  


Q ss_pred             ----cccCCCCCHHHHHHHHHHHHhCC-----CCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          277 ----TLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       277 ----~~~~g~V~v~DVA~ai~~ll~~~-----~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                          ....+++++.|++.+++.+++..     ....+++||++++...++.++++++.++++....
T Consensus       229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~  294 (347)
T d1z45a2         229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP  294 (347)
T ss_dssp             -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred             ccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCc
Confidence                11124677888888888877631     1135789999999999999999999999987543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=1.2e-26  Score=240.46  Aligned_cols=241  Identities=14%  Similarity=0.053  Sum_probs=168.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc----------------hhHHHHHHHHHHhhhhccccccCCCCCCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----------------QRAENLVQSVKQMKLDGELANKGIQPVEM  143 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~----------------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~  143 (530)
                      +|+|||||||||||++|+++|+++||+|++++.-.                .............            ...+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~   68 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------TGKS   68 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------------HCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh------------cCCC
Confidence            58999999999999999999999999999997211                1111111111111            1268


Q ss_pred             eEEEEecCCCHhhHHHHhCC--CcEEEEcccCCCCc--cCC---CCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCCCc
Q 009648          144 LELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFD---ITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT  215 (530)
Q Consensus       144 v~~v~~Dl~d~~sl~~a~~~--vD~VI~~Ag~~~~~--~~~---~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~~v  215 (530)
                      ++++.+||+|.+.+.++|++  +|+|||+|+.....  ..+   ....+++|+.|+.+|+++|++.+++ +||+.||..+
T Consensus        69 i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~  148 (393)
T d1i24a_          69 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE  148 (393)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred             cEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccc
Confidence            99999999999999999975  59999999854321  112   3356789999999999999998776 5666666554


Q ss_pred             cCCCCc------------------cccccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccc------
Q 009648          216 NKFGFP------------------AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET------  267 (530)
Q Consensus       216 ~~~~~~------------------~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~------  267 (530)
                      +.....                  .....+.+.|+.+|+.+|.+++    +.+++++++|++.|||++......      
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~  228 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  228 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccc
Confidence            322100                  0124566789999999998885    479999999999999997543211      


Q ss_pred             ----------------------cceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE-eCCCCCChhHHHHHH
Q 009648          268 ----------------------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV-IAETTAPLTPMEELL  324 (530)
Q Consensus       268 ----------------------~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv-~~~~~~t~~~i~ell  324 (530)
                                            ..+.+.+.+....+++|++|+|++++.++++.. ..+..+.+ .++...++.++++++
T Consensus       229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~-~~g~~~~~~~~~~~~si~el~~~i  307 (393)
T d1i24a_         229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFTEQFSVNELASLV  307 (393)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECSEEEEHHHHHHHH
T ss_pred             ccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhc-ccceeeeecCCCCeeEHHHHHHHH
Confidence                                  111222223333467999999999999999876 23332222 344557889999999


Q ss_pred             HhcCCCCCC
Q 009648          325 AKIPSQRAE  333 (530)
Q Consensus       325 ~~v~g~~~~  333 (530)
                      .++.+..+.
T Consensus       308 ~~~~~~~~~  316 (393)
T d1i24a_         308 TKAGSKLGL  316 (393)
T ss_dssp             HHHHHTTTC
T ss_pred             HHHHHhhCC
Confidence            998766554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1e-27  Score=232.13  Aligned_cols=204  Identities=19%  Similarity=0.222  Sum_probs=158.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++++|||||||||||++|+++|+++|  ++|++++|++.+...                   .....++++.+|+.+.+
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------------------~~~~~i~~~~~D~~~~~   72 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EAYKNVNQEVVDFEKLD   72 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------------------GGGGGCEEEECCGGGGG
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------------------cccceeeeeeecccccc
Confidence            346789999999999999999999999  499999998753221                   11357888899999999


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHH
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK  235 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK  235 (530)
                      ++.++++++|+||||+|.... ..+...++++|+.++.+++++|.+.++++||++|+.++...        ..+.|+++|
T Consensus        73 ~~~~~~~~~d~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~--------~~~~Y~~~K  143 (232)
T d2bkaa1          73 DYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVK  143 (232)
T ss_dssp             GGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHH
T ss_pred             ccccccccccccccccccccc-ccchhhhhhhcccccceeeecccccCccccccCCccccccC--------ccchhHHHH
Confidence            999999999999999986432 22334568899999999999999999999999999887432        235699999


Q ss_pred             HHHHHHHHHCCCC-EEEEEcCcccCCCcccccccce-----eecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          236 RKAEEALIASGLP-YTIVRPGGMERPTDAYKETHNI-----TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       236 ~~~E~~l~~~gl~-~tIvRPg~V~Gp~~~~~~~~~~-----~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +.+|+.+++.+++ ++|||||.+||+++.......+     ............|+++|+|+++++++.++.  .++++.+
T Consensus       144 ~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~--~~~~~i~  221 (232)
T d2bkaa1         144 GEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELL  221 (232)
T ss_dssp             HHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEE
T ss_pred             HHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc--cCCeEEE
Confidence            9999999998885 9999999999987643211111     001111222345999999999999998886  4666666


Q ss_pred             eC
Q 009648          310 IA  311 (530)
Q Consensus       310 ~~  311 (530)
                      .+
T Consensus       222 ~~  223 (232)
T d2bkaa1         222 EN  223 (232)
T ss_dssp             EH
T ss_pred             cH
Confidence            54

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.7e-27  Score=236.85  Aligned_cols=241  Identities=15%  Similarity=0.091  Sum_probs=177.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC------chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~------~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .|||||||||||||++|+++|+++|++|++++|.      ........+.+...            ...++.++++|++|
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d   69 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------------TGRSVEFEEMDILD   69 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------------HTCCCEEEECCTTC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh------------cCCCcEEEEeeccc
Confidence            4689999999999999999999999999999752      11111111111111            13689999999999


Q ss_pred             HhhHHHHhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc------c
Q 009648          154 RVQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------A  223 (530)
Q Consensus       154 ~~sl~~a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~------~  223 (530)
                      .+.+.+++.+  .++|+|+||....  ...++...+++|+.|+.+|+++|++.++++|||+||..+...+...      .
T Consensus        70 ~~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             cccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccccccccc
Confidence            9999998854  5689999986432  2234556789999999999999999999999999998774443211      1


Q ss_pred             cccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCccccc----------------------ccceeeccc-
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----------------------THNITLSQE-  275 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~----------------------~~~~~~~~~-  275 (530)
                      ...+.+.|+.+|..+|+.+++     .++.++++|++.+||+......                      ...+.+... 
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~  229 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND  229 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCc
Confidence            244667899999999988763     5899999999999998543210                      000111111 


Q ss_pred             -----CcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCCChhHHHHHHHhcCCCCC
Q 009648          276 -----DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA  332 (530)
Q Consensus       276 -----~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~  332 (530)
                           +....+++|++|+|.++..++.... ...+++|||+++...++.++++.+.++++...
T Consensus       230 ~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~  292 (346)
T d1ek6a_         230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI  292 (346)
T ss_dssp             SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC
T ss_pred             ccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCC
Confidence                 1112357999999999988765432 13578999999999999999999999999754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.94  E-value=2.4e-26  Score=237.47  Aligned_cols=248  Identities=17%  Similarity=0.071  Sum_probs=179.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEEC---------CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe
Q 009648           80 DNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVR---------SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC  149 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R---------~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~  149 (530)
                      .|+||||||+||||++|+++|++ .||+|+++++         ...........+...  ...   .......++.++.+
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~   76 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQS--DGP---KPPWADRYAALEVG   76 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHS--CSS---CCTTTTCCCEEEES
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhh--ccc---cccccccceEEEEC
Confidence            46899999999999999999996 6899999974         111222222222211  000   11122457899999


Q ss_pred             cCCCHhhHHHHhC---CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC----
Q 009648          150 DLEKRVQIEPALG---NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----  220 (530)
Q Consensus       150 Dl~d~~sl~~a~~---~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~----  220 (530)
                      |++|.+.+.++++   ++|+|||+|+....  ...+....+++|+.++.++++++++.++++++++|+........    
T Consensus        77 Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~  156 (383)
T d1gy8a_          77 DVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSV  156 (383)
T ss_dssp             CTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC---
T ss_pred             cccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccc
Confidence            9999999988884   68999999986432  22234456889999999999999999999999999876533221    


Q ss_pred             --------ccccccchhHHHHHHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccc-------------------
Q 009648          221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN-------------------  269 (530)
Q Consensus       221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~-------------------  269 (530)
                              ++....+.+.|+.+|+.+|++++.    .|++++++|++.+|||++.......                   
T Consensus       157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~  236 (383)
T d1gy8a_         157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI  236 (383)
T ss_dssp             --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred             cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence                    123456788899999999999874    6999999999999999765321100                   


Q ss_pred             -----------------eeecc------cCcccCCCCCHHHHHHHHHHHHhCC-------CCCCCcEEEEeCCCCCChhH
Q 009648          270 -----------------ITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-------SLSYCKVVEVIAETTAPLTP  319 (530)
Q Consensus       270 -----------------~~~~~------~~~~~~g~V~v~DVA~ai~~ll~~~-------~~~~g~vynv~~~~~~t~~~  319 (530)
                                       +.+.+      ++....+++|++|+|++++.+++..       ....+++|||+++...++.+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e  316 (383)
T d1gy8a_         237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE  316 (383)
T ss_dssp             SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred             cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence                             00000      0111235799999999999998642       11346899999999999999


Q ss_pred             HHHHHHhcCCCCC
Q 009648          320 MEELLAKIPSQRA  332 (530)
Q Consensus       320 i~ell~~v~g~~~  332 (530)
                      +.+++.++++...
T Consensus       317 l~~~i~~~~~~~~  329 (383)
T d1gy8a_         317 VIEVARKTTGHPI  329 (383)
T ss_dssp             HHHHHHHHHCCCC
T ss_pred             HHHHHHHHhCCCC
Confidence            9999999988653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=3.8e-26  Score=228.98  Aligned_cols=221  Identities=14%  Similarity=0.074  Sum_probs=170.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|+|||||||||||++|+++|+++|+.|+++++..+                                 +|+.|.+.+.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------------------~~~~~~~~~~~   48 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------------------LNLLDSRAVHD   48 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------------------CCTTCHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------------------ccccCHHHHHH
Confidence            578999999999999999999999999987654321                                 68999988888


Q ss_pred             HhC--CCcEEEEcccCCCCc---cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC-----ccc-----c
Q 009648          160 ALG--NASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA-----I  224 (530)
Q Consensus       160 a~~--~vD~VI~~Ag~~~~~---~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~-----~~~-----~  224 (530)
                      ++.  .+|+|||+|+.....   ..+....+++|+.++.+|+++|++++++||||+||.+++....     ++.     +
T Consensus        49 ~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          49 FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             HHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             HHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            874  589999999754321   2233455789999999999999999999999999988744221     111     1


Q ss_pred             ccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccccc--------------------ceeecccCcccC
Q 009648          225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--------------------NITLSQEDTLFG  280 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~~--------------------~~~~~~~~~~~~  280 (530)
                      ..+.+.|+.+|.++|++++    +.|+++++|||++||||++.+....                    .+.+...+....
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  208 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  208 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEE
Confidence            2234579999999999986    3699999999999999976542211                    111222233344


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-------CCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-------LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-------~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .++|++|+++++..++.+..       ......+++..+...++.++.+++.++++....
T Consensus       209 ~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~  268 (315)
T d1e6ua_         209 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR  268 (315)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred             EEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc
Confidence            67999999999999987642       234678999999988999999999999987754

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.93  E-value=2.7e-26  Score=231.89  Aligned_cols=239  Identities=13%  Similarity=-0.008  Sum_probs=175.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-----hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-----k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +|+|||||||||||++|+++|+++||+|++++|..+     +...+.....            ......++++.+|+.+.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Di~~~   68 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH------------NVNKALMKLHYADLTDA   68 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------------CCEEEEECCTTCH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhh------------hccccceEEEEccccCH
Confidence            478999999999999999999999999999999543     2222111000            01236789999999999


Q ss_pred             hhHHHHhC--CCcEEEEcccCCCCc--cCCCCcchHhHHHHHHHHHHHHHhc-----CCCEEEEEcCCCccCCC----Cc
Q 009648          155 VQIEPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG----FP  221 (530)
Q Consensus       155 ~sl~~a~~--~vD~VI~~Ag~~~~~--~~~~~~~~~vNv~gt~~Ll~aa~~~-----gv~r~V~iSS~~v~~~~----~~  221 (530)
                      +.+...++  ++|+|||+|+.....  ..++...+++|+.++.+++++++..     ...++++.||.......    .+
T Consensus        69 ~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          69 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence            99998885  679999999864332  2345567889999999999998753     33467777776543221    34


Q ss_pred             cccccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCcccccc---------------cceeecccCcccCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET---------------HNITLSQEDTLFGGQ  282 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~~---------------~~~~~~~~~~~~~g~  282 (530)
                      +.+..+.+.|+.+|..+|+++.    ..+++++++|++.||||.......               ......+......++
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~  228 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW  228 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence            4557788899999999998875    379999999999999996432110               011111222333357


Q ss_pred             CCHHHHHHHHHHHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      +|++|+|++++.+++++.   ...+++..+...+..++.+++.++++....
T Consensus       229 ~~v~D~a~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  276 (339)
T d1n7ha_         229 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNWK  276 (339)
T ss_dssp             EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCGG
T ss_pred             eeeehHHHHHHHHHhcCC---CCccccccccccccchhhhhhhhhhhcccC
Confidence            999999999999999876   456677777778899999999999987643

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.93  E-value=9.6e-26  Score=226.55  Aligned_cols=237  Identities=15%  Similarity=0.116  Sum_probs=174.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc--hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~--~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ||||||||||||++|+++|+++||+|++++|-.  .....+ ..+.              ...+++++.+|++|.+.+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~-~~~~--------------~~~~~~~i~~Di~~~~~l~~   66 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-HWLS--------------SLGNFEFVHGDIRNKNDVTR   66 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-HHHH--------------TTCCCEEEECCTTCHHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHH-HHhh--------------ccCCcEEEEcccCCHHHHHH
Confidence            699999999999999999999999999987532  222221 1111              13689999999999999999


Q ss_pred             HhCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCC---------------
Q 009648          160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF---------------  220 (530)
Q Consensus       160 a~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~---------------  220 (530)
                      ++++  +|+|||+|+....  ...+....+++|+.||.+|+++|.+.+++++|+.||.+......               
T Consensus        67 ~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          67 LITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             HHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence            9976  5999999986543  22345677899999999999999999998888777764422211               


Q ss_pred             -------ccccccchhHHHHHHHHHHHHHH----HCCCCEEEEEcCcccCCCccccc-------------------ccce
Q 009648          221 -------PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------THNI  270 (530)
Q Consensus       221 -------~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tIvRPg~V~Gp~~~~~~-------------------~~~~  270 (530)
                             ......+...|+..|...|.++.    ..++..+++|+..+|++......                   ...+
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  226 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCce
Confidence                   01224567889999999998865    47899999999999876432211                   1112


Q ss_pred             eecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEEeCC--CCCChhHHHHHHHhcCCCCCC
Q 009648          271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       271 ~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv~~~--~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .+.+.+....+++|++|++++++.++++.....+++|++..+  ...++.++.+++.++++....
T Consensus       227 ~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~  291 (338)
T d1orra_         227 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR  291 (338)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred             EEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce
Confidence            222333344468999999999999998754346889999554  445788999999998887643

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.93  E-value=4.2e-26  Score=225.99  Aligned_cols=234  Identities=17%  Similarity=0.144  Sum_probs=175.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH-HHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL-VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l-~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++||||||||||||++|+++|+++||+|++++|+....... .+.+...            ...+++++.+|+.|.+.+
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~------------~~~~v~~v~~d~~d~~~~   69 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF------------KQLGAKLIEASLDDHQRL   69 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH------------HTTTCEEECCCSSCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh------------ccCCcEEEEeecccchhh
Confidence            356799999999999999999999999999999976432211 1111111            126799999999999999


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      .+++.+++++||+++....         ..|..+..+++++|++.+..++|+.|+.+.... .......+...|...|..
T Consensus        70 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~-~~~~~~~~~~~~~~~~~~  139 (312)
T d1qyda_          70 VDALKQVDVVISALAGGVL---------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD-IMEHALQPGSITFIDKRK  139 (312)
T ss_dssp             HHHHTTCSEEEECCCCSSS---------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT-SCCCCCSSTTHHHHHHHH
T ss_pred             hhhccCcchhhhhhhhccc---------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCC-CcccccchhhhhhHHHHH
Confidence            9999999999999875322         235667788999999998788888898876432 223345566779999999


Q ss_pred             HHHHHHHCCCCEEEEEcCcccCCCccccc---------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCcE-E
Q 009648          238 AEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV-V  307 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~---------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~v-y  307 (530)
                      ++++.++.+++|+++|++.+||+......         ...+.+...+.....+|+++|+|++++.++.++. ..+++ |
T Consensus       140 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~-~~~~~~~  218 (312)
T d1qyda_         140 VRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMY  218 (312)
T ss_dssp             HHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEE
T ss_pred             HHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc-ccCceEE
Confidence            99999999999999999999986432211         1112222223333457999999999999999876 45555 5


Q ss_pred             EEeCCCCCChhHHHHHHHhcCCCCCCCC
Q 009648          308 EVIAETTAPLTPMEELLAKIPSQRAEPK  335 (530)
Q Consensus       308 nv~~~~~~t~~~i~ell~~v~g~~~~~~  335 (530)
                      ++.++...|+.++.+++.+++|......
T Consensus       219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~  246 (312)
T d1qyda_         219 IRPPMNILSQKEVIQIWERLSEQNLDKI  246 (312)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHHTCCCEEC
T ss_pred             EeCCCcCCCHHHHHHHHHHHHCCCCeEE
Confidence            6666677899999999999998766443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=2.5e-25  Score=211.36  Aligned_cols=187  Identities=22%  Similarity=0.280  Sum_probs=138.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .|+|||||||||||++|+++|+++|+  +|++++|+...                       ...++.   .++.|..++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------------------~~~~~~---~~~~d~~~~   55 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------------EHPRLD---NPVGPLAEL   55 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------------CCTTEE---CCBSCHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------------------hccccc---ccccchhhh
Confidence            47999999999999999999999997  67777776521                       113333   444454444


Q ss_pred             HHH-hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       158 ~~a-~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      ... ...+|+||||+|...........++++|+.++.+++++|++.++++||++|+.++...        ....|+.+|+
T Consensus        56 ~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~--------~~~~y~~~K~  127 (212)
T d2a35a1          56 LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------SSIFYNRVKG  127 (212)
T ss_dssp             GGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred             hhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc--------cccchhHHHH
Confidence            433 3568999999987644444445678999999999999999999999999999887432        2345999999


Q ss_pred             HHHHHHHHCCCC-EEEEEcCcccCCCcccccccceeecccCcccC--CCCCHHHHHHHHHHHHhCCC
Q 009648          237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNITLSQEDTLFG--GQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       237 ~~E~~l~~~gl~-~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~--g~V~v~DVA~ai~~ll~~~~  300 (530)
                      .+|+++++.+++ ++|+||+.|||+.+.+.....+.........+  ..||++|||++|+.+++++.
T Consensus       128 ~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         128 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            999999998875 99999999999976542221111111111111  24999999999999998875

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.92  E-value=1.1e-25  Score=221.02  Aligned_cols=227  Identities=18%  Similarity=0.189  Sum_probs=171.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH--HHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV--QSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~--~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+|||||||||||||++|+++|+++||+|++++|+........  ..+...            ...+++++.+|+.+...
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~~~   69 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDDHAS   69 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTCHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh------------ccCCcEEEEeecccchh
Confidence            3578999999999999999999999999999999865432211  111111            12578999999999999


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      +...+.+++.|||+++..             +..++.++++++...+++++++.|+.+...  ...........+...+.
T Consensus        70 ~~~~~~~~~~vi~~~~~~-------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~~~~~  134 (307)
T d1qyca_          70 LVEAVKNVDVVISTVGSL-------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDV--DNVHAVEPAKSVFEVKA  134 (307)
T ss_dssp             HHHHHHTCSEEEECCCGG-------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCT--TSCCCCTTHHHHHHHHH
T ss_pred             hhhhhhhceeeeeccccc-------------ccchhhHHHHHHHHhccccceeeecccccc--ccccccccccccccccc
Confidence            999999999999998743             234567888999999999999988876532  22223344566788888


Q ss_pred             HHHHHHHHCCCCEEEEEcCcccCCCccccccc--------ceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCCCc-EE
Q 009648          237 KAEEALIASGLPYTIVRPGGMERPTDAYKETH--------NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK-VV  307 (530)
Q Consensus       237 ~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~~~--------~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~g~-vy  307 (530)
                      ..+.++++.+++++++|++++||+........        ...+.........+|+++|+|++++++++++. ..++ +|
T Consensus       135 ~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~  213 (307)
T d1qyca_         135 KVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTLY  213 (307)
T ss_dssp             HHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEEE
T ss_pred             cccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChh-hcCceeE
Confidence            99999999999999999999998754332111        11222223333457999999999999998876 3455 45


Q ss_pred             EEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          308 EVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       308 nv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ++++++..|+.++++++.+++|....
T Consensus       214 ~~~~~~~~s~~ei~~~~~~~~G~~~~  239 (307)
T d1qyca_         214 LRLPANTLSLNELVALWEKKIDKTLE  239 (307)
T ss_dssp             CCCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred             EeCCCCccCHHHHHHHHHHHHCCCCc
Confidence            66777888999999999999997654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.92  E-value=3.4e-25  Score=217.35  Aligned_cols=213  Identities=14%  Similarity=0.127  Sum_probs=170.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|||||||||||++|+++|.++||+|++++|+.                                  +|+.|.+.+.++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------------~D~~d~~~~~~~   47 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------------LDITNVLAVNKF   47 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------------CCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------------ccCCCHHHHHHH
Confidence            6799999999999999999999999999998863                                  689999999999


Q ss_pred             hC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHH
Q 009648          161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       161 ~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      ++  +.|+|||+|+....  ........+.+|+....++++.+...+. +++++|+..+....     .+....++...|
T Consensus        48 l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~  126 (281)
T d1vl0a_          48 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAY  126 (281)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             HHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhh
Confidence            86  56999999986532  2223345577888889999888887765 77778876553322     233446677889


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCCCccccc--------ccceeecccCcccCCCCCHHHHHHHHHHHHhCCCCCC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY  303 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~--------~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~~~~~  303 (530)
                      +.+|...|+++++.+++++|+|+++|||+++++..        ...+.+.  ......+++++|+++++..++++..   
T Consensus       127 ~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~---  201 (281)
T d1vl0a_         127 GKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN---  201 (281)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC---
T ss_pred             hhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc---
Confidence            99999999999999999999999999999876521        1111111  1234578999999999999999876   


Q ss_pred             CcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          304 CKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       304 g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      .++||+++++.+++.++++.+.+.+|....
T Consensus       202 ~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~  231 (281)
T d1vl0a_         202 YGTFHCTCKGICSWYDFAVEIFRLTGIDVK  231 (281)
T ss_dssp             CEEEECCCBSCEEHHHHHHHHHHHHCCCCE
T ss_pred             cCceeEeCCCccchHHHHHHHHHHhCCCce
Confidence            579999999999999999999999998653

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.91  E-value=8.6e-24  Score=207.53  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=164.6

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++++.             ..++.++.+|++|.+
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-------------g~~~~~~~~Dvt~~~   72 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-------------GYESSGYAGDVSKKE   72 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-------------TCCEEEEECCTTCHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHH
Confidence            4578899999999999999999999999999999999999888887776543             257899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      ++++++       +++|++|||||....      +..++...+++|+.++..+.+++    ++++.++||++||......
T Consensus        73 ~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~  152 (251)
T d2c07a1          73 EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG  152 (251)
T ss_dssp             HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred             HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC
Confidence            887766       578999999996432      22345677999999988877765    4556789999999865332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                            ......|+.+|++++.+.+       ..|++++.|.||+|.++...................+.+...+|||++
T Consensus       153 ------~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~  226 (251)
T d2c07a1         153 ------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANL  226 (251)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence                  2234679999999998876       379999999999998874322111111111122334456789999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|+.+. .+..|+++.|.++.
T Consensus       227 v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         227 ACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhCchhCCCcCcEEEECCCc
Confidence            99999754 33578899888873

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.91  E-value=2.2e-24  Score=219.15  Aligned_cols=241  Identities=13%  Similarity=0.060  Sum_probs=170.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+|||||||||||++|++.|+++||+|++++|+..+...+.+..              ...++++++.+|++|.+.+.
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~--------------~~~~~i~~~~~Dl~d~~~l~   72 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA--------------RVADGMQSEIGDIRDQNKLL   72 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT--------------TTTTTSEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh--------------hcccCCeEEEeeccChHhhh
Confidence            5689999999999999999999999999999999887655443211              11367999999999999999


Q ss_pred             HHhC--CCcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-------Cccccccc
Q 009648          159 PALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------FPAAILNL  227 (530)
Q Consensus       159 ~a~~--~vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-------~~~~~~~~  227 (530)
                      ++++  .+|+|||+|+....  ...++...+.+|+.++.+++++|++.+..++++.+|.+....+       .++....+
T Consensus        73 ~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          73 ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG  152 (356)
T ss_dssp             HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             hhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCC
Confidence            8886  46999999986432  2234566789999999999999998765544444444332222       12344567


Q ss_pred             hhHHHHHHHHHHHHHH-------------HCCCCEEEEEcCcccCCCcccccc-----------cceeecccCcccCCCC
Q 009648          228 FWGVLLWKRKAEEALI-------------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQV  283 (530)
Q Consensus       228 ~~~Y~~sK~~~E~~l~-------------~~gl~~tIvRPg~V~Gp~~~~~~~-----------~~~~~~~~~~~~~g~V  283 (530)
                      ...|+.+|...|..++             ..++.++++||+.+|||++.....           ....+.........++
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  232 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ  232 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccc
Confidence            7889999999987765             247899999999999998643211           1111112222333579


Q ss_pred             CHHHHHHHHHHHHhCCCC---CCCcE--EEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          284 SNLQVAELLACMAKNRSL---SYCKV--VEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~---~~g~v--ynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      |++|+|++++.++.+...   ..+..  +++......+..++.+.+.+.++....
T Consensus       233 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  287 (356)
T d1rkxa_         233 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS  287 (356)
T ss_dssp             ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred             ccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCcc
Confidence            999999999988875421   12223  333344455778888888888876543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.90  E-value=5e-23  Score=201.32  Aligned_cols=210  Identities=18%  Similarity=0.187  Sum_probs=162.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++.                .++.++.+|++|.+++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v   67 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW   67 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------------CcceEEEeecCCHHHH
Confidence            678999999999999999999999999999999999988777655321                4678999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|++|||||....      +..+|...+++|+.++.++.+++.    +++-++||++||......  
T Consensus        68 ~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~--  145 (244)
T d1nffa_          68 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG--  145 (244)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc--
Confidence            7766       578999999996532      233456779999999888877654    456679999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|+.++.+.+       ..|++++.|.||+|.++........     ......+.+...+|||++++
T Consensus       146 ----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~pl~R~~~p~diA~~v~  216 (244)
T d1nffa_         146 ----TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVV  216 (244)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCCSSSSCBCHHHHHHHHH
T ss_pred             ----cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhccccCCCCHHHHHHHHH
Confidence                2235679999999998876       2799999999999987643221111     11223445688999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++.+. .+..|+++.|.++..
T Consensus       217 fL~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         217 YLASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHhChhhCCCcCCEEEECCCee
Confidence            999754 345789999988753

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.2e-23  Score=205.54  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=161.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|++|||||+++||+++++.|+++|++|++++|++++++++.+++.                .++..+.+|++|.+++
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----------------~~~~~~~~Dv~~~~~v   65 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----------------ANGKGLMLNVTDPASI   65 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----------------CCCcEEEEEecCHHHh
Confidence            468999999999999999999999999999999999988887765432                4578899999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|++|||||....      +..++...+++|+.++..+.+++.    +++-++||++||......  
T Consensus        66 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~--  143 (243)
T d1q7ba_          66 ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG--  143 (243)
T ss_dssp             HHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred             hhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC--
Confidence            7766       468999999986432      233456779999999888877764    456679999999865332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                          ......|+.+|++++.+.+       .+|++++.|.||+|.++...................+.+...+|||++++
T Consensus       144 ----~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~  219 (243)
T d1q7ba_         144 ----NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA  219 (243)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence                2234679999999998876       27999999999999765321111000000111223345678999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++.+. .+..|+++.+.++.
T Consensus       220 fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCeEEECCCe
Confidence            999754 33578999998874

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=7.5e-23  Score=201.22  Aligned_cols=219  Identities=12%  Similarity=0.122  Sum_probs=166.1

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++++.             ..++.++.+|++|.++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~-------------g~~~~~~~~Dvs~~~~   74 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL-------------GGQAFACRCDITSEQE   74 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc-------------CCcEEEEEccCCCHHH
Confidence            467899999999999999999999999999999999999988888877654             2578999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCc-----cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~-----~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       +++|++|||||.....     ..+|...+++|+.++.++.+++.    +.+.++||++||......  
T Consensus        75 ~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~--  152 (255)
T d1fmca_          75 LSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--  152 (255)
T ss_dssp             HHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--
T ss_pred             HHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc--
Confidence            77665       5799999999965332     23356679999999888877654    456679999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                          ......|+.+|++.+.+.+       .+|++++.|.||+|.++......... ..........+.+...+|||+++
T Consensus       153 ----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v  228 (255)
T d1fmca_         153 ----NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA  228 (255)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred             ----ccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                2235679999999988776       27999999999999775321110000 00011122334567899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++.+. .+..|+++.|.++..
T Consensus       229 ~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         229 LFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHHhCchhcCCcCCEEEECcCcc
Confidence            9999754 345799999998863

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=9.8e-23  Score=199.94  Aligned_cols=220  Identities=13%  Similarity=0.138  Sum_probs=164.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.+++.++.+++.+.        .    ..++.++.+|++|.++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--------~----g~~~~~~~~Dv~~~~~   69 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--------Y----GVETMAFRCDVSNYEE   69 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------H----CCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--------h----CCcEEEEEccCCCHHH
Confidence            367899999999999999999999999999999999998888776665432        1    2578899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|++|||||....      +..+|...+++|+.++..+.+++.    +++.+++|+++|......+
T Consensus        70 v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~  149 (251)
T d1vl8a_          70 VKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT  149 (251)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc
Confidence            77766       579999999996432      333456779999999888877755    4566799999997553332


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc--ceeecccCcccCCCCCHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~--~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .     .....|+.+|++++.+.+       ..|++++.|.||+|.++........  ...........+.+...+|||+
T Consensus       150 ~-----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~  224 (251)
T d1vl8a_         150 M-----PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKG  224 (251)
T ss_dssp             S-----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             C-----ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            2     234679999999998876       2799999999999988753221110  0111111223345678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++|+.+. .+..|+++.|.++.
T Consensus       225 ~v~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         225 VAVFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCchhCCCcCcEEEeCcCe
Confidence            999999764 33578999988874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.89  E-value=8.1e-23  Score=200.97  Aligned_cols=216  Identities=13%  Similarity=0.048  Sum_probs=159.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+||||||+++||+++++.|+++|++|++++|+.+++..+.+++                ..++.++.+|++|.+++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v   66 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------------GDAARYQHLDVTIEEDW   66 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------GGGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------CCceEEEEcccCCHHHH
Confidence            57899999999999999999999999999999999998776654421                25789999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|++|||||....      +..++...+++|+.++.++.+++.    +.+.++||++||......  
T Consensus        67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~--  144 (254)
T d1hdca_          67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG--  144 (254)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc--
Confidence            7766       578999999996432      223456779999999888877764    456679999999876432  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCC-CCHHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQVAELL  292 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~-V~v~DVA~ai  292 (530)
                          ......|+.+|++++.+.+       ..|++++.|.||+|.++...................+.+ ...+|||+++
T Consensus       145 ----~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v  220 (254)
T d1hdca_         145 ----LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV  220 (254)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                2235679999999998876       278999999999998753211100000000111122223 2589999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETTA  315 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~~  315 (530)
                      ++++.+. .+..|+++.|.++...
T Consensus       221 ~fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         221 VKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHhchhhCCCCCceEEeCCCccC
Confidence            9999754 3457999999988543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=1.8e-22  Score=196.94  Aligned_cols=213  Identities=16%  Similarity=0.097  Sum_probs=158.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+.                  -+++++.+|++|.++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~------------------~~~~~~~~Dv~~~~~   63 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------------VGAHPVVMDVADPAS   63 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------------TTCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------------------cCCeEEEEecCCHHH
Confidence            35789999999999999999999999999999999998877765431                  356789999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh----cCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~----~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|++|||||....      +..+|...+++|+.++.++.+++..    .+.++++++||.+.  .+
T Consensus        64 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~--~~  141 (242)
T d1ulsa_          64 VERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LG  141 (242)
T ss_dssp             HHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GC
T ss_pred             HHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccc--cC
Confidence            87766       478999999996532      2234667799999999988887653    45557777777543  22


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++.+.+.+.       .|++++.|.||+|.++...................+.+...+|||+++
T Consensus       142 -----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v  216 (242)
T d1ulsa_         142 -----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAA  216 (242)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence                 22356799999999988762       789999999999987643221111111111122334567899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      ++++.+. .+..|+++.|.++..
T Consensus       217 ~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         217 LFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHhchhhCCCCCcEEEECCCcc
Confidence            9999754 335799999988853

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.89  E-value=1.6e-22  Score=199.11  Aligned_cols=220  Identities=14%  Similarity=0.100  Sum_probs=165.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++.+.           ....++.++.+|++|.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~-----------~~~~~~~~~~~Dvt~~~~v   70 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-----------APDAEVLTTVADVSDEAQV   70 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTCCEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-----------CCCCeEEEEeccCCCHHHH
Confidence            46889999999999999999999999999999999999888877666543           1235788999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++       +++|++|||||....       +..+|...+++|+.++.++.+++.    +.+-++||++||...... 
T Consensus        71 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-  149 (258)
T d1iy8a_          71 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-  149 (258)
T ss_dssp             HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-
Confidence            7766       579999999995321       223456779999999998887754    456679999999876332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc------cccc--eeecccCcccCCCCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHN--ITLSQEDTLFGGQVS  284 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~------~~~~--~~~~~~~~~~~g~V~  284 (530)
                           ......|+.+|++++.+.+       ..||+++.|.||+|.++.....      ....  ..........+.+..
T Consensus       150 -----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~  224 (258)
T d1iy8a_         150 -----IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE  224 (258)
T ss_dssp             -----CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcC
Confidence                 2335679999999987765       3799999999999987632110      0000  000111223345678


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          285 NLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       285 v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .+|||+++++|+.+. .+..|+++.|.++..
T Consensus       225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         225 APEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            999999999999754 345789999998864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.89  E-value=1.3e-22  Score=199.01  Aligned_cols=216  Identities=13%  Similarity=0.070  Sum_probs=159.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+.+.              ...++.++.+|++|.+++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~~~~~v   69 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG--------------TPDQIQFFQHDSSDEDGW   69 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------CTTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--------------CCCcEEEEEccCCCHHHH
Confidence            678999999999999999999999999999999999988777655432              125799999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCC-EEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVN-HFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~-r~V~iSS~~v~~~~  219 (530)
                      ++++       +++|++|||||....      +..+|...+++|+.++.++.+++.    +++.+ +||++||...... 
T Consensus        70 ~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-  148 (251)
T d1zk4a1          70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-  148 (251)
T ss_dssp             HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-
Confidence            7666       578999999996432      223356679999999998888765    34544 8999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCcccccc-cceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++++.+.+         .+|++++.|.||+|.++....... ............+.+...+|||
T Consensus       149 -----~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA  223 (251)
T d1zk4a1         149 -----DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA  223 (251)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred             -----CCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence                 2234679999999876644         358999999999998753211110 0111111223344567899999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++|+.+. .+..|+++.|.++.
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         224 YICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhCCCcCcEEEECccc
Confidence            9999999754 33568899988874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.89  E-value=1.4e-22  Score=206.38  Aligned_cols=228  Identities=17%  Similarity=0.102  Sum_probs=167.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hhH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQI  157 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~sl  157 (530)
                      ++|+|||||||||||++||++|+++||+|++++|+..+....  .+.              ...+++++++|+.|. +.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~--------------~~~~v~~~~gD~~d~~~~~   65 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQ--------------AIPNVTLFQGPLLNNVPLM   65 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHH--------------TSTTEEEEESCCTTCHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhc--------------ccCCCEEEEeeCCCcHHHH
Confidence            468999999999999999999999999999999988764431  111              126899999999985 457


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      ..+++++|+++++....          ...|+..+.+++++|.++|+.++|+.||........    ......|..+|..
T Consensus        66 ~~a~~~~~~~~~~~~~~----------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~----~~~~~~~~~~k~~  131 (350)
T d1xgka_          66 DTLFEGAHLAFINTTSQ----------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG----PWPAVPMWAPKFT  131 (350)
T ss_dssp             HHHHTTCSEEEECCCST----------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS----SCCCCTTTHHHHH
T ss_pred             HHHhcCCceEEeecccc----------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC----cccchhhhhhHHH
Confidence            88999999999886432          134678899999999999998888888875422211    1223347788999


Q ss_pred             HHHHHHHCCCCEEEEEcCcccCCCccccc-ccc----------eeecccCcccCCCCCH-HHHHHHHHHHHhCCC-CCCC
Q 009648          238 AEEALIASGLPYTIVRPGGMERPTDAYKE-THN----------ITLSQEDTLFGGQVSN-LQVAELLACMAKNRS-LSYC  304 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~Gp~~~~~~-~~~----------~~~~~~~~~~~g~V~v-~DVA~ai~~ll~~~~-~~~g  304 (530)
                      .++++++.+++++++|++++++....... ...          +...........+++. +||+++++.++.+.. ...|
T Consensus       132 ~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G  211 (350)
T d1xgka_         132 VENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  211 (350)
T ss_dssp             HHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCC
Confidence            99999999999999999998764321100 000          0111111111234664 899999999997642 2358


Q ss_pred             cEEEEeCCCCCChhHHHHHHHhcCCCCCCCCcc
Q 009648          305 KVVEVIAETTAPLTPMEELLAKIPSQRAEPKES  337 (530)
Q Consensus       305 ~vynv~~~~~~t~~~i~ell~~v~g~~~~~~~~  337 (530)
                      ++|+++++ .+|+.++++++.+++|+.......
T Consensus       212 ~~~~~~g~-~~T~~eia~~l~~~~G~~v~~~~v  243 (350)
T d1xgka_         212 HRIALTFE-TLSPVQVCAAFSRALNRRVTYVQV  243 (350)
T ss_dssp             CEEEECSE-EECHHHHHHHHHHHHTSCEEEEEC
T ss_pred             eEEEEeCC-cCCHHHHHHHHHHHHCCcceEEEC
Confidence            89999886 589999999999999987655443

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.89  E-value=1.2e-22  Score=199.74  Aligned_cols=216  Identities=12%  Similarity=0.113  Sum_probs=161.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++                ..++.++.+|++|.+++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----------------~~~~~~~~~Dvt~~~~v   66 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----------------GPAACAIALDVTDQASI   66 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----------------CTTEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------CCceEEEEeeCCCHHHH
Confidence            57899999999999999999999999999999999998877765532                15788999999999988


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hc-CCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~-gv~r~V~iSS~~v~~~~  219 (530)
                      ++++       +++|++|||||....      +..++...+++|+.++..+.+++.    +. +.++||++||.+.... 
T Consensus        67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-  145 (256)
T d1k2wa_          67 DRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-  145 (256)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-
Confidence            7766       578999999996432      223356779999999988887644    22 3569999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-----cce------eecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNI------TLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-----~~~------~~~~~~~~~~g  281 (530)
                           ......|+.+|++++.+.+       ..|++++.|.||++.++.......     ...      .........+.
T Consensus       146 -----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  220 (256)
T d1k2wa_         146 -----EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGR  220 (256)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred             -----cccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence                 2234679999999998876       279999999999998875221000     000      00011122345


Q ss_pred             CCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      +...+|||+++++|+.+.. +..|+++.|.++..+
T Consensus       221 ~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         221 MGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEECcchhh
Confidence            6789999999999986543 357999999888543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.89  E-value=2e-22  Score=198.58  Aligned_cols=219  Identities=16%  Similarity=0.124  Sum_probs=164.9

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++...             ..++.++.+|++|.+
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-------------g~~~~~~~~Dv~~~~   70 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK-------------GFKVEASVCDLSSRS   70 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCEEEEEECCTTCHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCCceEEEeeCCCHH
Confidence            3578999999999999999999999999999999999999988887776543             257889999999988


Q ss_pred             hHHHHh-------C-CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccC
Q 009648          156 QIEPAL-------G-NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~-------~-~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~  217 (530)
                      ++++++       . .+|++|||||....      +..++...+++|+.++..+.+++.    +.+.++||++||.....
T Consensus        71 ~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~  150 (259)
T d2ae2a_          71 ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL  150 (259)
T ss_dssp             HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc
Confidence            877655       3 48999999996432      233456779999999888877654    45667999999986633


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----cceeecccCcccCCCCCH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~~~~~~~~~~~~~g~V~v  285 (530)
                      .      ......|+.+|+.++.+.+.       .|++++.|.||+|.++.......     ..+.........+.+...
T Consensus       151 ~------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  224 (259)
T d2ae2a_         151 A------VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEP  224 (259)
T ss_dssp             C------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCH
T ss_pred             c------cccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCH
Confidence            2      22346799999999988762       78999999999997753211000     000001112334456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|||+++++|+.+. .+..|+++.|.++-
T Consensus       225 edvA~~v~fL~S~~s~~itG~~i~VDGG~  253 (259)
T d2ae2a_         225 KELAAMVAFLCFPAASYVTGQIIYVDGGL  253 (259)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence            99999999999764 34578999888874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.1e-22  Score=199.61  Aligned_cols=214  Identities=15%  Similarity=0.131  Sum_probs=160.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|++|||||+++||+++++.|+++|++|++++|++++++.+.++                 ..++.++.+|++|.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-----------------~~~~~~~~~Dvs~~~~   65 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQE-----------------LPGAVFILCDVTQEDD   65 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------------CTTEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-----------------cCCCeEEEccCCCHHH
Confidence            46789999999999999999999999999999999998887766542                 1568899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       +++|++|||||....       +..+|...+++|+.++.++++++.    +.+ ++||++||......
T Consensus        66 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~  144 (250)
T d1ydea1          66 VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIG  144 (250)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHC
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCccccccccccc
Confidence            87766       478999999995321       222356779999999888887765    334 69999999865322


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc-c-----ccceeecccCcccCCCCCH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E-----THNITLSQEDTLFGGQVSN  285 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~-~-----~~~~~~~~~~~~~~g~V~v  285 (530)
                            ......|+.+|.+.+.+.+       ..|++++.|.||+|.++..... .     ...+.........+.+...
T Consensus       145 ------~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p  218 (250)
T d1ydea1         145 ------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQP  218 (250)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCH
T ss_pred             ------ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCH
Confidence                  2234679999999998865       3799999999999976531110 0     0000001112233456789


Q ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEeCCCC
Q 009648          286 LQVAELLACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       286 ~DVA~ai~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      +|||+++++|+.+..+..|+++.|.++..
T Consensus       219 ~eva~~v~fL~Sda~~itG~~i~vDGG~~  247 (250)
T d1ydea1         219 AEVGAAAVFLASEANFCTGIELLVTGGAE  247 (250)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence            99999999999765556799999988853

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.89  E-value=1.8e-22  Score=198.88  Aligned_cols=219  Identities=14%  Similarity=0.055  Sum_probs=159.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ++++|++|||||+++||+++++.|+++|++|++++|+. +.++.+.+++...        .    ..++.++.+|++|.+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~--------~----g~~~~~~~~Dv~~~~   68 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--------H----GVKVLYDGADLSKGE   68 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--------H----TSCEEEECCCTTSHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh--------c----CCcEEEEECCCCCHH
Confidence            46789999999999999999999999999999999975 4556655544332        0    257899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~  218 (530)
                      ++++++       +++|++|||||....      +..++...+++|+.++.++++++    ++++.++||++||......
T Consensus        69 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~  148 (260)
T d1x1ta1          69 AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA  148 (260)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec
Confidence            887766       578999999996432      23345677999999988776664    4556679999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-----ce-------eecccCccc
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----NI-------TLSQEDTLF  279 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-----~~-------~~~~~~~~~  279 (530)
                            ......|+.+|++.+.+.+       ..|++++.|.||+|.++........     ..       .........
T Consensus       149 ------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  222 (260)
T d1x1ta1         149 ------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS  222 (260)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred             ------cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence                  2234679999999998776       2789999999999987642111000     00       000111223


Q ss_pred             CCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +.+...+|||+++++|+.+. .+..|+++.|.++.
T Consensus       223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~  257 (260)
T d1x1ta1         223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcch
Confidence            45678999999999999754 34578999988874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.89  E-value=1.8e-22  Score=198.88  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=151.8

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|+||||||+++||+++++.|+++|++|++++|+.++++++.+++...             ..++.++.+|++|.+
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-------------~~~~~~~~~Dv~~~~   70 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK-------------GFQVTGSVCDASLRP   70 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTSHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCceEEEeccCCCHH
Confidence            3568999999999999999999999999999999999999888887766543             257899999999988


Q ss_pred             hHHHHh--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccC
Q 009648          156 QIEPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       156 sl~~a~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~  217 (530)
                      ++++++        +.+|++|||||....      +..++...+++|+.++..+.+++.    +.+.++||++||.....
T Consensus        71 ~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~  150 (259)
T d1xq1a_          71 EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV  150 (259)
T ss_dssp             HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC------
T ss_pred             HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc
Confidence            776655        248999999996432      333466779999999888877654    45778999999986633


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ceeecccCcccCCCCCHHHHH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      .      ......|+.+|++++.+.+       ..|++++.|.||+|.++........ ...........+.+...+|||
T Consensus       151 ~------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA  224 (259)
T d1xq1a_         151 S------ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVS  224 (259)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGH
T ss_pred             c------ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHH
Confidence            2      1234579999999998776       2799999999999987643211111 111111122234457899999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++++|+.+. .+..|+++.|.++.
T Consensus       225 ~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         225 SLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHHHhCchhcCCcCcEEEeCCCE
Confidence            9999999654 33568888888774

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.1e-22  Score=196.66  Aligned_cols=214  Identities=16%  Similarity=0.117  Sum_probs=160.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+++||+++++.|+++|++|++++|+.++++.+.+++                 .+++.+.+|+.|.++
T Consensus         4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-----------------~~~~~~~~Dv~d~~~   66 (244)
T d1pr9a_           4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----------------PGIEPVCVDLGDWEA   66 (244)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEEeCCCHHH
Confidence            367899999999999999999999999999999999988877665421                 467889999999999


Q ss_pred             HHHHhC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCCCCcc
Q 009648          157 IEPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l~~a~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++++++   ++|++|||||....      +..++...+++|+.++..+.+++..     .+.++||++||......    
T Consensus        67 v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----  142 (244)
T d1pr9a_          67 TERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----  142 (244)
T ss_dssp             HHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc----
Confidence            988874   67999999996432      2334567799999998887776542     35579999999876432    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc--cceeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~--~~~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|++.+.+.+.       .|++++.|.||+|.++.......  ............+.+...+|||++++
T Consensus       143 --~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~  220 (244)
T d1pr9a_         143 --VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL  220 (244)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred             --ccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              22346799999999988762       78999999999998763211100  00111112233455678999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++.+. .+..|+++.|.++.
T Consensus       221 fL~S~~a~~itG~~i~vDGG~  241 (244)
T d1pr9a_         221 FLLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhCchhCCcCCcEEEECccH
Confidence            999764 34578899888874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.89  E-value=2.3e-22  Score=198.92  Aligned_cols=221  Identities=15%  Similarity=0.177  Sum_probs=164.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++..              ...+.++.+|+.|.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~--------------~~~~~~~~~Dv~~~~~   68 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------------PDVISFVHCDVTKDED   68 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--------------CCceEEEEccCCCHHH
Confidence            46789999999999999999999999999999999999888777654422              2568899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCc--------cCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccC
Q 009648          157 IEPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK  217 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~--------~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~  217 (530)
                      +++++       +++|++|||||.....        ..++...+++|+.++..+.+++.    +++.+++|++||.....
T Consensus        69 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~  148 (268)
T d2bgka1          69 VRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT  148 (268)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred             HHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc
Confidence            87766       5789999999954321        12345668999999888877764    45667999999986643


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cce----eecccCcccCCCCCH
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI----TLSQEDTLFGGQVSN  285 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~~----~~~~~~~~~~g~V~v  285 (530)
                      .+..     ....|+.+|++++.+.+       ..|++++.|.||+|.++....... ...    .........+.+...
T Consensus       149 ~~~~-----~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p  223 (268)
T d2bgka1         149 AGEG-----VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA  223 (268)
T ss_dssp             CCTT-----SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred             cccc-----cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCH
Confidence            3211     12369999999998876       279999999999998874321110 000    001112234456789


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCCCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAETTAP  316 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~~~t  316 (530)
                      +|||+++++|+.+. .+..|+++.|.++....
T Consensus       224 edvA~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         224 EDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence            99999999999754 34579999999986543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=2.2e-22  Score=197.08  Aligned_cols=213  Identities=13%  Similarity=0.020  Sum_probs=157.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+++||+++++.|+++|++|++++|+.+..+.. +   +               .+..++++|++|.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~---~---------------~~~~~~~~Dv~~~~~   62 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-E---A---------------IGGAFFQVDLEDERE   62 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-H---H---------------HTCEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-H---H---------------cCCeEEEEeCCCHHH
Confidence            36789999999999999999999999999999999998654322 1   1               234678999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|++|||||....      +..+|...+++|+.++.++.+++.    +++-++||++||...... 
T Consensus        63 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~-  141 (248)
T d2d1ya1          63 RVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA-  141 (248)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB-
T ss_pred             HHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc-
Confidence            77666       578999999996432      223356779999999888887765    456679999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-----c-cceeecccCcccCCCCCHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----T-HNITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-----~-~~~~~~~~~~~~~g~V~v~  286 (530)
                           ......|+.+|++++.+.+       ..|++++.|.||+|.++......     . ............+.+...+
T Consensus       142 -----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  216 (248)
T d2d1ya1         142 -----EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE  216 (248)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHH
T ss_pred             -----ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHH
Confidence                 2335679999999998765       27999999999999775321100     0 0000111122334567899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      |||+++++|+.+. .+..|+++.|.++..
T Consensus       217 dia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         217 EVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            9999999999754 335789999988753

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.88  E-value=2.6e-22  Score=197.13  Aligned_cols=215  Identities=17%  Similarity=0.118  Sum_probs=161.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|.+|||||+++||+++++.|+++|++|++++|++++++.+.+++++.         |    .++.++.+|++|.+++++
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~---------g----~~~~~~~~Dv~~~~~v~~   67 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---------G----GHAVAVKVDVSDRDQVFA   67 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeeCCCHHHHHH
Confidence            356799999999999999999999999999999999998888777654         2    578999999999988776


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hc-CCCEEEEEcCCCccCCCCc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~-gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++       +++|++|||||....      +..+|...+++|+.++.++++++.    +. +.++||++||.+....   
T Consensus        68 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~---  144 (255)
T d1gega_          68 AVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG---  144 (255)
T ss_dssp             HHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc---
Confidence            65       579999999996432      233456779999999998887754    33 3458999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-----ccc------eeecccCcccCCCC
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THN------ITLSQEDTLFGGQV  283 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-----~~~------~~~~~~~~~~~g~V  283 (530)
                         ......|+.+|++.+.+.+       ..|++++.|.||+|.++......     ...      ..........+.+.
T Consensus       145 ---~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~  221 (255)
T d1gega_         145 ---NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS  221 (255)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred             ---CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCc
Confidence               2234679999999998876       37999999999999765321100     000      00001122334567


Q ss_pred             CHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ..+|||+++++|+.+. .+..|+++.|.++.
T Consensus       222 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         222 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence            8999999999999754 33468999988875

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=1.6e-22  Score=197.44  Aligned_cols=214  Identities=15%  Similarity=0.070  Sum_probs=160.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|++|||||+++||+++++.|+++|++|++++|+.+++.++.++                 ..++..+.+|+.|.++
T Consensus         2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-----------------~~~~~~~~~Dv~~~~~   64 (242)
T d1cyda_           2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-----------------CPGIEPVCVDLGDWDA   64 (242)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------------STTCEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-----------------cCCCeEEEEeCCCHHH
Confidence            36789999999999999999999999999999999998877765442                 1467889999999999


Q ss_pred             HHHHhC---CCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh-----cCCCEEEEEcCCCccCCCCcc
Q 009648          157 IEPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       157 l~~a~~---~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~-----~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++++++   ++|++|||||....      +..++...+++|+.++..+.+++..     .+.+++|++||......    
T Consensus        65 v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----  140 (242)
T d1cyda_          65 TEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT----  140 (242)
T ss_dssp             HHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----
T ss_pred             HHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc----
Confidence            988885   57999999996432      3333567799999999988876542     24469999999865332    


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-cc-eeecccCcccCCCCCHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-ITLSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-~~-~~~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                        ......|+.+|++++.+.+.       .|++++.|.||+|.++....... .. ..........+.+...+|||++++
T Consensus       141 --~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~  218 (242)
T d1cyda_         141 --FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSIL  218 (242)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHH
T ss_pred             --CCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              22356799999999988762       78999999999998763211110 00 000111223445678999999999


Q ss_pred             HHHhCC-CCCCCcEEEEeCCC
Q 009648          294 CMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       294 ~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|+.+. .+..|+++.|.++.
T Consensus       219 fL~S~~s~~itG~~i~vDGG~  239 (242)
T d1cyda_         219 FLLSDRSASTSGGGILVDAGY  239 (242)
T ss_dssp             HHHSGGGTTCCSSEEEESTTG
T ss_pred             HHhCchhcCcCCceEEeCcch
Confidence            999764 34578999988874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.88  E-value=2.2e-22  Score=197.78  Aligned_cols=215  Identities=18%  Similarity=0.176  Sum_probs=163.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.+|||||+++||+++++.|+++|++|++++|+.++++.+.+++++.             ..++.++.+|++|.++++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-------------g~~~~~~~~Dvs~~~~v~   67 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-------------GVEADGRTCDVRSVPEIE   67 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEeecCCHHHHH
Confidence            3678999999999999999999999999999999999988888777654             257899999999998887


Q ss_pred             HHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh------cCCCEEEEEcCCCccCCC
Q 009648          159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~------~gv~r~V~iSS~~v~~~~  219 (530)
                      +++       +++|++|||||....      +..++...+++|+.++.++++++..      .+.++||++||...... 
T Consensus        68 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~-  146 (257)
T d2rhca1          68 ALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-  146 (257)
T ss_dssp             HHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-
T ss_pred             HHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-
Confidence            766       468999999996432      3334567799999999999998753      35569999999866332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc-----ccc------eeecccCcccCC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----THN------ITLSQEDTLFGG  281 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~-----~~~------~~~~~~~~~~~g  281 (530)
                           ......|+.+|++++.+.+.       .|++++.|.||+|.++......     ...      ..........+.
T Consensus       147 -----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR  221 (257)
T d2rhca1         147 -----VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR  221 (257)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSS
T ss_pred             -----cccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCC
Confidence                 22346799999999988762       6899999999999765321100     000      000111223345


Q ss_pred             CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          282 QVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      +...+|||+++++|+.+. .+..|+++.|.++
T Consensus       222 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         222 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            678999999999999654 3457899988876

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=1.9e-22  Score=196.20  Aligned_cols=207  Identities=14%  Similarity=0.077  Sum_probs=153.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+++||+++++.|+++|++|++++|+.++                        ..++..+++|++|.++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~------------------------~~~~~~~~~Dv~~~~~   59 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGA------------------------PKGLFGVEVDVTDSDA   59 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCC------------------------CTTSEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcch------------------------hcCceEEEEecCCHHH
Confidence            5788999999999999999999999999999999998753                        1456789999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHH----HHhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~a----a~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|++|||||....      +..+|...+++|+.++..+.++    +++.+.++||++||...... 
T Consensus        60 v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~-  138 (237)
T d1uzma1          60 VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-  138 (237)
T ss_dssp             HHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred             HHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC-
Confidence            77766       478999999996422      3344667799999998777665    44567779999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                           ......|+.+|++++.+.+       ..|++++.|.||+|.++...................+.+...+|||+++
T Consensus       139 -----~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v  213 (237)
T d1uzma1         139 -----IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV  213 (237)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred             -----CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence                 2234679999999998776       2799999999999987632111000000111122334567899999999


Q ss_pred             HHHHhCC-CCCCCcEEEEeCCC
Q 009648          293 ACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++++.+. .+..|+++.+.++-
T Consensus       214 ~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         214 SFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhcCCcCCeEEECCCC
Confidence            9999754 33578999988873

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.88  E-value=5.8e-22  Score=193.87  Aligned_cols=215  Identities=12%  Similarity=0.103  Sum_probs=153.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+..+..  ...++..             ..++.++.+|++|.+++
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~~~~~~~-------------g~~~~~~~~Dvs~~~~v   67 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA--EAAIRNL-------------GRRVLTVKCDVSQPGDV   67 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH--HHHHHHT-------------TCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--HHHHHHc-------------CCcEEEEEeeCCCHHHH
Confidence            56899999999999999999999999999999999875322  2222222             26789999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++       +++|++|||||....      +..+|...+++|+.++..+.+++.    +++.++||++||......  
T Consensus        68 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--  145 (247)
T d2ew8a1          68 EAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK--  145 (247)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc--
Confidence            7765       579999999996532      333466779999999888877654    556679999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-ccce-eecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-~~~~-~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|++.+.+.+       ..|++++.|.||+|.++...... .... .........+.+...+|||++
T Consensus       146 ----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~  221 (247)
T d2ew8a1         146 ----IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGA  221 (247)
T ss_dssp             ----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHH
T ss_pred             ----CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHH
Confidence                2335679999999987765       37899999999999876432111 0000 111111223345678999999


Q ss_pred             HHHHHhCC-CCCCCcEEEEeCCC
Q 009648          292 LACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       292 i~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +++|+.+. .+..|+++.|.++.
T Consensus       222 v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         222 AAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHhCchhcCCcCCeEEECCCE
Confidence            99999754 33578999998874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.88  E-value=5e-22  Score=195.95  Aligned_cols=218  Identities=15%  Similarity=0.115  Sum_probs=161.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch-hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~-k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.+ .++.+.+++++.             ..++.++.+|++|.++
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~-------------g~~~~~~~~Dvt~~~~   71 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV-------------GGEAIAVKGDVTVESD   71 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCEEEEEECCTTSHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence            57899999999999999999999999999999999864 566666666543             2578899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCC-CEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv-~r~V~iSS~~v~~~  218 (530)
                      +++++       +++|++|||||....      +..++...+++|+.++.++.+++.    +++. ++||++||.+....
T Consensus        72 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~  151 (261)
T d1geea_          72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP  151 (261)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc
Confidence            87766       478999999996432      333456779999999888877654    4443 46889999865332


Q ss_pred             CCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccc-ccce-eecccCcccCCCCCHHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~-~~~~-~~~~~~~~~~g~V~v~DVA  289 (530)
                            ......|+.+|++++.+.+       ..|++++.|.||+|.++...... .... .........+.+...+|||
T Consensus       152 ------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA  225 (261)
T d1geea_         152 ------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA  225 (261)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred             ------CccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence                  2234679999999998876       27999999999999876432111 0000 0011122334567899999


Q ss_pred             HHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          290 ELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       290 ~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      +++++|+.+. .+..|+++.|.++..
T Consensus       226 ~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         226 AVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCee
Confidence            9999999754 335799999988853

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.88  E-value=8.5e-22  Score=195.26  Aligned_cols=223  Identities=16%  Similarity=0.155  Sum_probs=161.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++.+.+          ....++.++.+|++|.++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~----------~~~~~~~~~~~Dvs~~~~   71 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG----------VSEKQVNSVVADVTTEDG   71 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----------CCGGGEEEEECCTTSHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----------CCCCceEEEEccCCCHHH
Confidence            3678999999999999999999999999999999999999888887776541          123578999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCccC----------CCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCcc
Q 009648          157 IEPAL-------GNASVVICCIGASEKEVF----------DITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN  216 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~~~----------~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~  216 (530)
                      +++++       +++|++|||||.......          +|...+++|+.++.++.+++...   +.+++|+++|....
T Consensus        72 v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~  151 (272)
T d1xkqa_          72 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAG  151 (272)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS
T ss_pred             HHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcc
Confidence            77766       578999999996532111          24566889999998888876532   23466666664332


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc--------c-eeecccCcccC
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--------N-ITLSQEDTLFG  280 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~--------~-~~~~~~~~~~~  280 (530)
                      ..+     ......|+.+|++.+.+.+       ..|++++.|.||+|.++........        . ..........+
T Consensus       152 ~~~-----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  226 (272)
T d1xkqa_         152 PQA-----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG  226 (272)
T ss_dssp             SSC-----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS
T ss_pred             ccC-----CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC
Confidence            222     2234679999999987765       3799999999999987632111000        0 00011122334


Q ss_pred             CCCCHHHHHHHHHHHHhCC--CCCCCcEEEEeCCCC
Q 009648          281 GQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT  314 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~--~~~~g~vynv~~~~~  314 (530)
                      .+...+|||+++++|+.++  .+..|+++.|.++..
T Consensus       227 R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         227 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence            5678999999999999643  335799999998854

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.88  E-value=2.3e-22  Score=196.49  Aligned_cols=214  Identities=16%  Similarity=0.090  Sum_probs=157.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +.||||||+++||+++++.|+++|++|++.+ |+.+..+.+.++++..             ..++.++.+|++|.+++++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-------------g~~~~~~~~Dv~~~~~v~~   68 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-------------GGQAITFGGDVSKEADVEA   68 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-------------TCEEEEEECCTTSHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------------CCcEEEEeCCCCCHHHHHH
Confidence            4799999999999999999999999999875 5666777777766654             2578899999999988877


Q ss_pred             Hh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCcc
Q 009648          160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++       +++|++|||||....      +..+|...+++|+.++.++.+++.    +++-++||++||......    
T Consensus        69 ~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~----  144 (244)
T d1edoa_          69 MMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----  144 (244)
T ss_dssp             HHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----
T ss_pred             HHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC----
Confidence            66       478999999996432      333466779999999888877654    456779999999865322    


Q ss_pred             ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ......|+.+|.+.+.+.+       ..|++++.|.||++.++...................+.+...+|||++++++
T Consensus       145 --~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL  222 (244)
T d1edoa_         145 --NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFL  222 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              2234679999999998876       3799999999999976532111000000111223344567899999999999


Q ss_pred             HhCC--CCCCCcEEEEeCCC
Q 009648          296 AKNR--SLSYCKVVEVIAET  313 (530)
Q Consensus       296 l~~~--~~~~g~vynv~~~~  313 (530)
                      +..+  .+..|+++.+.++-
T Consensus       223 a~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         223 ALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHCSGGGGCCSCEEEESTTT
T ss_pred             HCCchhcCCcCCeEEeCCCe
Confidence            7433  33568899888873

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.4e-21  Score=196.23  Aligned_cols=222  Identities=14%  Similarity=0.113  Sum_probs=164.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|++|||||+++||+++++.|+++|++|++++|+.++++...+++....        ......++.++.+|++|.++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~--------~~~~~~~~~~~~~Dvs~~~~   80 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL--------PPTKQARVIPIQCNIRNEEE   80 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTS--------CTTCCCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhh--------ccccCceEEEEeccCCCHHH
Confidence            4789999999999999999999999999999999999999888877765431        11223689999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      +++++       +++|++|||||....      +..++...+++|+.++..+.+++.    +.+.+++|++|+.+...  
T Consensus        81 v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~--  158 (297)
T d1yxma1          81 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG--  158 (297)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC--
T ss_pred             HHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc--
Confidence            77766       578999999985432      233456779999999998888765    34556888887754322  


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc---ccce-eecccCcccCCCCCHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---THNI-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~---~~~~-~~~~~~~~~~g~V~v~DV  288 (530)
                           ......|+.+|++++.+.+.       .|++++.|.||+|.++......   .... .........+.+...+||
T Consensus       159 -----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedv  233 (297)
T d1yxma1         159 -----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV  233 (297)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred             -----ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHH
Confidence                 12346799999999988763       7899999999999876421110   0011 001112233456789999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++++|+.+. .+..|+++.|.++.
T Consensus       234 A~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         234 SSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            99999999754 34579999998885

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.88  E-value=3.3e-22  Score=197.02  Aligned_cols=216  Identities=13%  Similarity=0.069  Sum_probs=161.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++++.             ..++.++.+|++|.+++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~-------------g~~~~~~~~Dv~~~~~v   69 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK-------------GVEARSYVCDVTSEEAV   69 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-------------TSCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence            57899999999999999999999999999999999999888887766543             25789999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCC
Q 009648          158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~  219 (530)
                      ++++       +++|++|||||....       +..+|...+++|+.++.++.+++.    +.+.++||++||...... 
T Consensus        70 ~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-  148 (260)
T d1zema1          70 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-  148 (260)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-
T ss_pred             HHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-
Confidence            7666       578999999995421       222356778999999888877754    456679999999765332 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-------------ccc-ce--eecccC
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------------ETH-NI--TLSQED  276 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-------------~~~-~~--~~~~~~  276 (530)
                           ......|+.+|++.+.+.+.       .|++++.|.||+|.++.....             ... ..  ......
T Consensus       149 -----~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T d1zema1         149 -----PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS  223 (260)
T ss_dssp             -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred             -----CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhc
Confidence                 22346799999999988762       789999999999987631100             000 00  000012


Q ss_pred             cccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCC
Q 009648          277 TLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAE  312 (530)
Q Consensus       277 ~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~  312 (530)
                      ...+.+...+|||+++++|+.+. .+..|+++.|.++
T Consensus       224 ~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         224 VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            22345678899999999999764 3346888887664

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.4e-22  Score=195.43  Aligned_cols=219  Identities=13%  Similarity=0.133  Sum_probs=162.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|++|||||+++||+++++.|+++|++|++++|+.++++.+..++.+.           ....++.++.+|++|.++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~~~v~   70 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-----------FEPQKTLFIQCDVADQQQLR   70 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-----------SCGGGEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----------cCCCcEEEEEeecCCHHHHH
Confidence            5789999999999999999999999999999999998888776654322           12357899999999998887


Q ss_pred             HHh-------CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHH----hcC---CCEEEEEcCCCccCCCCcccc
Q 009648          159 PAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAK---VNHFIMVSSLGTNKFGFPAAI  224 (530)
Q Consensus       159 ~a~-------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~----~~g---v~r~V~iSS~~v~~~~~~~~~  224 (530)
                      +++       +++|++|||||....  .+++..+++|+.++.++.+++.    +++   .++||++||......      
T Consensus        71 ~~~~~~~~~~G~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~------  142 (254)
T d2gdza1          71 DTFRKVVDHFGRLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP------  142 (254)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC------
T ss_pred             HHHHHHHHHcCCcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC------
Confidence            766       578999999997543  4567889999998887776665    332   257999999876332      


Q ss_pred             ccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCccccccc-cee--e-----cccCcccCCCCCHHH
Q 009648          225 LNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETH-NIT--L-----SQEDTLFGGQVSNLQ  287 (530)
Q Consensus       225 ~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~~--~-----~~~~~~~~g~V~v~D  287 (530)
                      ......|+.+|++++.+.+         ..|++++.|.||+|.++........ ...  .     .......+.+...+|
T Consensus       143 ~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  222 (254)
T d2gdza1         143 VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPL  222 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHH
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHH
Confidence            2234679999998876643         3789999999999976531110000 000  0     001112235678999


Q ss_pred             HHHHHHHHHhCCCCCCCcEEEEeCCCCCCh
Q 009648          288 VAELLACMAKNRSLSYCKVVEVIAETTAPL  317 (530)
Q Consensus       288 VA~ai~~ll~~~~~~~g~vynv~~~~~~t~  317 (530)
                      ||+++++|+.++. ..|+++.|.++..+.+
T Consensus       223 vA~~v~fL~s~~~-itG~~i~VdGG~~~~~  251 (254)
T d2gdza1         223 IANGLITLIEDDA-LNGAIMKITTSKGIHF  251 (254)
T ss_dssp             HHHHHHHHHHCTT-CSSCEEEEETTTEEEE
T ss_pred             HHHHHHHHHcCCC-CCCCEEEECCCCeeec
Confidence            9999999999876 6799999999875433

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.88  E-value=1.2e-21  Score=193.25  Aligned_cols=221  Identities=15%  Similarity=0.157  Sum_probs=159.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++...+          ....++.++.+|++|.+++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~----------~~~~~~~~~~~Dvt~~~~v   72 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----------VSEQNVNSVVADVTTDAGQ   72 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----------CCcCceEEEEccCCCHHHH
Confidence            578999999999999999999999999999999999999888887776541          1225799999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccC
Q 009648          158 EPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNK  217 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~  217 (530)
                      ++++       +++|++|||||....          +..+|...+++|+.++.++.+++...   +.+++|+++|.....
T Consensus        73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~  152 (264)
T d1spxa_          73 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL  152 (264)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS
T ss_pred             HHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc
Confidence            7766       578999999995321          22235667899999988888776532   234677777765433


Q ss_pred             CCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ce--------eecccCcccCC
Q 009648          218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI--------TLSQEDTLFGG  281 (530)
Q Consensus       218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~--------~~~~~~~~~~g  281 (530)
                      .+.     .....|+.+|++.+.+.+       ..|++++.|.||+|.++........ ..        .........+.
T Consensus       153 ~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R  227 (264)
T d1spxa_         153 HAT-----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV  227 (264)
T ss_dssp             SCC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS
T ss_pred             ccC-----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence            322     234579999999988776       2799999999999987643211000 00        00011122345


Q ss_pred             CCCHHHHHHHHHHHHhCC--CCCCCcEEEEeCCC
Q 009648          282 QVSNLQVAELLACMAKNR--SLSYCKVVEVIAET  313 (530)
Q Consensus       282 ~V~v~DVA~ai~~ll~~~--~~~~g~vynv~~~~  313 (530)
                      +...+|||+++++|+.++  .+..|+++.|.++.
T Consensus       228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence            678999999999999643  44579999998874

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.88  E-value=1e-21  Score=193.42  Aligned_cols=218  Identities=19%  Similarity=0.160  Sum_probs=161.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+++||+++++.|+++|++|++++|++++++++.+.+...             ...+.++.+|+.|.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~-------------~~~~~~~~~D~s~~~~   69 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-------------GLNVEGSVCDLLSRTE   69 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCCceEEEeecCCHHH
Confidence            467899999999999999999999999999999999999888887766654             2578899999999988


Q ss_pred             HHHHh--------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~--------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++        +.+|+||||||....      +..++...+++|+.++..+.+++.    +.+.+++|++||......
T Consensus        70 ~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~  149 (258)
T d1ae1a_          70 RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA  149 (258)
T ss_dssp             HHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc
Confidence            77665        247999999996533      333456779999999888877654    457779999999876432


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc------eeecccCcccCCCCCH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN------ITLSQEDTLFGGQVSN  285 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~------~~~~~~~~~~~g~V~v  285 (530)
                            ......|+.+|.+.+.+.+.       .|++++.|.||++.++.........      +.........+.+...
T Consensus       150 ------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~p  223 (258)
T d1ae1a_         150 ------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKP  223 (258)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCH
T ss_pred             ------cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCH
Confidence                  22356799999999988763       6899999999999876422111000      0000111233456899


Q ss_pred             HHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          286 LQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       286 ~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      +|||+++++++.+. .+..|+++.|.++.
T Consensus       224 ediA~~v~fL~S~~s~~itG~~i~vDGG~  252 (258)
T d1ae1a_         224 QEVSALIAFLCFPAASYITGQIIWADGGF  252 (258)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhChhhCCCcCcEEEeCCCe
Confidence            99999999999654 33478889888874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.87  E-value=6.8e-22  Score=196.23  Aligned_cols=221  Identities=15%  Similarity=0.149  Sum_probs=162.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++.+.+.          ...++.++.+|++|.+++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~----------~~~~~~~~~~Dv~~~~~v   71 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----------PAEKINAVVADVTEASGQ   71 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC----------CCcceEEEEeeCCCHHHH
Confidence            5689999999999999999999999999999999999998888877765421          124789999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCC
Q 009648          158 EPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~  218 (530)
                      ++++       +.+|++|||||....        +..+|...+++|+.++..+.+++.    +.+.+++|++||.+....
T Consensus        72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~  151 (274)
T d1xhla_          72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA  151 (274)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence            7766       578999999995321        112356678999999888877765    445567887777554221


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccc-----c---cee-ecccCcccCCC
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----H---NIT-LSQEDTLFGGQ  282 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~-----~---~~~-~~~~~~~~~g~  282 (530)
                            ......|+.+|.+++.+.+.       .|++++.|.||+|.++.......     .   ... ........+.+
T Consensus       152 ------~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~  225 (274)
T d1xhla_         152 ------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC  225 (274)
T ss_dssp             ------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred             ------CCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCC
Confidence                  22346799999999988762       79999999999998763211100     0   000 01112234456


Q ss_pred             CCHHHHHHHHHHHHhC--CCCCCCcEEEEeCCCC
Q 009648          283 VSNLQVAELLACMAKN--RSLSYCKVVEVIAETT  314 (530)
Q Consensus       283 V~v~DVA~ai~~ll~~--~~~~~g~vynv~~~~~  314 (530)
                      ...+|||+++++|+..  ..+..|+++.|.++..
T Consensus       226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            7899999999999963  3446799999999854

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.87  E-value=9.4e-22  Score=193.07  Aligned_cols=215  Identities=16%  Similarity=0.150  Sum_probs=158.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+++|++|||||+++||+++++.|+++|++|++++|+.++++.+.+++                ..+..++.+|++|.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~   66 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----------------GERSMFVRHDVSSEAD   66 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----------------CTTEEEECCCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------CCCeEEEEeecCCHHH
Confidence            367899999999999999999999999999999999998877765533                1567889999999888


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc---CCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~---gv~r~V~iSS~~v~~~~~  220 (530)
                      +++++       +++|++|||||....      +..+|...+++|+.++..+++++..+   +.++||++||......  
T Consensus        67 ~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~--  144 (253)
T d1hxha_          67 WTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP--  144 (253)
T ss_dssp             HHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC--
T ss_pred             HHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC--
Confidence            77665       578999999996432      22345677999999988887776532   3379999999876332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCccccc----ccceee-cccCcccCCCCCHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKE----THNITL-SQEDTLFGGQVSNL  286 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~----~~~~~~-~~~~~~~~g~V~v~  286 (530)
                          ......|+.+|++.+.+.+.         ++++++.|.||+|.++......    ...... .......+.+...+
T Consensus       145 ----~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe  220 (253)
T d1hxha_         145 ----IEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE  220 (253)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred             ----ccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH
Confidence                22346799999998877651         3599999999999875321100    000010 11112234567899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |||+++++++.+. .+..|+++.|.++-
T Consensus       221 dvA~~v~fL~S~~s~~itG~~i~VDGG~  248 (253)
T d1hxha_         221 RIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEECccH
Confidence            9999999999754 33578999988874

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.87  E-value=8.1e-23  Score=201.02  Aligned_cols=220  Identities=13%  Similarity=0.044  Sum_probs=161.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+||||||+||||++|++.|.++|+.|. ++++...                              +.+|+.|.+.+.++
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~------------------------------~~~Dl~~~~~~~~~   49 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE------------------------------FCGDFSNPKGVAET   49 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS------------------------------SCCCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc------------------------------ccCcCCCHHHHHHH
Confidence            6899999999999999999999987554 4443310                              23799999999999


Q ss_pred             hCC--CcEEEEcccCCCC--ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHH
Q 009648          161 LGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV  231 (530)
Q Consensus       161 ~~~--vD~VI~~Ag~~~~--~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y  231 (530)
                      +++  +|+||||||....  ...+....+++|+.++.+|+++|++.++ +++++||..++...     .+.....+.+.|
T Consensus        50 i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y  128 (298)
T d1n2sa_          50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (298)
T ss_dssp             HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             HHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchH
Confidence            975  5999999986532  3344456789999999999999998886 78888887664332     233446677889


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEcCcccCC-Ccccccccc------eeecccCcccCCCCCHHHHHHHHHHHHhC---CCC
Q 009648          232 LLWKRKAEEALIASGLPYTIVRPGGMERP-TDAYKETHN------ITLSQEDTLFGGQVSNLQVAELLACMAKN---RSL  301 (530)
Q Consensus       232 ~~sK~~~E~~l~~~gl~~tIvRPg~V~Gp-~~~~~~~~~------~~~~~~~~~~~g~V~v~DVA~ai~~ll~~---~~~  301 (530)
                      +.+|..+|++++.....+.++|.+..++. +........      ..+.........+++++|+++++..++..   .. 
T Consensus       129 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~-  207 (298)
T d1n2sa_         129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP-  207 (298)
T ss_dssp             HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG-
T ss_pred             hhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccc-
Confidence            99999999999987778888888877644 332211110      01111122344678999999998887652   22 


Q ss_pred             CCCcEEEEeCCCCCChhHHHHHHHhcCCCCCC
Q 009648          302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRAE  333 (530)
Q Consensus       302 ~~g~vynv~~~~~~t~~~i~ell~~v~g~~~~  333 (530)
                      ..+++||++++...+..++++++.++.+..+.
T Consensus       208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~  239 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGI  239 (298)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTC
T ss_pred             cccccccccCCCceecHHHHHHHHhhhhccCc
Confidence            35899999999989999999999887765543

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.8e-21  Score=191.42  Aligned_cols=210  Identities=19%  Similarity=0.186  Sum_probs=152.7

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+++|+||||||+++||+++++.|+++|++|++++|+.++++.+.+++++.         +  ...++.++.+|+.|++
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~---------~--~~~~~~~~~~Dls~~~   74 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA---------G--YPGTLIPYRCDLSNEE   74 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T--CSSEEEEEECCTTCHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C--CCceEEEEEccCCCHH
Confidence            3467899999999999999999999999999999999999999888877654         1  1257889999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcC--CCEEEEEcCCCcc
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTN  216 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~g--v~r~V~iSS~~v~  216 (530)
                      ++++++       +++|++|||||....      +..++...+++|+.+..++.+++.    +++  -++||++||....
T Consensus        75 ~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~  154 (257)
T d1xg5a_          75 DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGH  154 (257)
T ss_dssp             HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGT
T ss_pred             HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhc
Confidence            877665       579999999996422      233356679999999888766653    443  4699999998653


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH---------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ  287 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~D  287 (530)
                      ...    +......|+.+|..++.+.+         ..|++++.|.||.+-++...................+.++..+|
T Consensus       155 ~~~----p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~ped  230 (257)
T d1xg5a_         155 RVL----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPED  230 (257)
T ss_dssp             SCC----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHH
T ss_pred             CCC----CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHH
Confidence            221    12234569999999887754         26899999999998765321111111111111122345688999


Q ss_pred             HHHHHHHHHhCCC
Q 009648          288 VAELLACMAKNRS  300 (530)
Q Consensus       288 VA~ai~~ll~~~~  300 (530)
                      ||+++++++.++.
T Consensus       231 vA~~v~fL~s~~a  243 (257)
T d1xg5a_         231 VAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHHHHHHHSCT
T ss_pred             HHHHHHHHhCChh
Confidence            9999999998875

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.86  E-value=2.6e-21  Score=188.41  Aligned_cols=192  Identities=13%  Similarity=0.129  Sum_probs=149.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCe-------EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFR-------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~-------V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +.||||||+++||+++++.|+++|++       |++++|+.++++.+.++++..             ..++.++.+|++|
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~-------------g~~~~~~~~Dvt~   68 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-------------GALTDTITADISD   68 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-------------TCEEEEEECCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCC
Confidence            45899999999999999999999987       899999999888887766543             2578899999999


Q ss_pred             HhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCcc
Q 009648          154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN  216 (530)
Q Consensus       154 ~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~  216 (530)
                      .+++++++       +++|++|||||....      +..++...+++|+.++..+.+++.    +++.++||++||....
T Consensus        69 ~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~  148 (240)
T d2bd0a1          69 MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT  148 (240)
T ss_dssp             HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence            98877666       578999999996432      334466779999999888776654    5566799999998764


Q ss_pred             CCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                      ..      ......|+.+|++.+.+.+       ..|++++.|.||+|.++.....         ...........+|||
T Consensus       149 ~~------~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~---------~~~~~~~~~~PedvA  213 (240)
T d2bd0a1         149 KA------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---------DDEMQALMMMPEDIA  213 (240)
T ss_dssp             SC------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---------CSTTGGGSBCHHHHH
T ss_pred             CC------CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc---------CHhhHhcCCCHHHHH
Confidence            32      2235679999999887765       3789999999999987642111         111112346789999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      +++++++.++.
T Consensus       214 ~~v~~l~s~~~  224 (240)
T d2bd0a1         214 APVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHTSCT
T ss_pred             HHHHHHHcCCc
Confidence            99999998765

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.86  E-value=1.4e-21  Score=192.34  Aligned_cols=225  Identities=13%  Similarity=0.068  Sum_probs=160.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+++||+++++.|+++|++|++++|+.+++.++.+++.+.        .    ..++.++.+|++|.++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~--------~----g~~~~~~~~Dv~~~~~   73 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--------F----GVKTKAYQCDVSNTDI   73 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--------H----TCCEEEEECCTTCHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--------h----CCceEEEEccCCCHHH
Confidence            467899999999999999999999999999999999998887776655432        0    2578999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----h-cCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----I-AKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~-~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       +++|++|||||....      +..++...+++|+.++.++.+++.    + .+.++++.+++......
T Consensus        74 v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~  153 (260)
T d1h5qa_          74 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII  153 (260)
T ss_dssp             HHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccc
Confidence            87766       468999999986432      223456778999999888777654    2 34456676676544222


Q ss_pred             CCcc-ccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHH
Q 009648          219 GFPA-AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       219 ~~~~-~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                      .... ........|+.+|.+.+.+.+       ..|++++.|.||+|.++...................+.+...+|||+
T Consensus       154 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~  233 (260)
T d1h5qa_         154 NQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTG  233 (260)
T ss_dssp             CEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             cccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            1110 112234579999999988765       37999999999999876432211111111112233445678999999


Q ss_pred             HHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          291 LLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      ++++|+.+.. +..|+++.|.++.
T Consensus       234 ~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         234 QAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhcchhCCCcCceEEECCCe
Confidence            9999997653 3468999988874

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=6.1e-22  Score=195.23  Aligned_cols=226  Identities=14%  Similarity=0.093  Sum_probs=150.7

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCC-eEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCCHhhHH
Q 009648           83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQIE  158 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~sl~  158 (530)
                      ||||||+||||++||+.|+++|+ +|+++++-..  +...+.+    .              ....+.. .|+.+.....
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~----~--------------~~~~~~~~~~~~~~~~~~   63 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD----L--------------NIADYMDKEDFLIQIMAG   63 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT----S--------------CCSEEEEHHHHHHHHHTT
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc----c--------------chhhhccchHHHHHHhhh
Confidence            89999999999999999999995 7888864222  2221110    0              1111111 1111111112


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC-----CccccccchhHHHH
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL  233 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~-----~~~~~~~~~~~Y~~  233 (530)
                      ..+..+++|+|+|+.......+......+|+.++.+++++++..+++ ||+.||..+....     .......+...|+.
T Consensus        64 ~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~  142 (307)
T d1eq2a_          64 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGY  142 (307)
T ss_dssp             CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHH
T ss_pred             hcccchhhhhhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence            23357899999998665555555667888899999999999999985 5555555442221     12234566778999


Q ss_pred             HHHHHHHHHHH----CCCCEEEEEcCcccCCCcccccccc---------------ee-ecccCcccCCCCCHHHHHHHHH
Q 009648          234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN---------------IT-LSQEDTLFGGQVSNLQVAELLA  293 (530)
Q Consensus       234 sK~~~E~~l~~----~gl~~tIvRPg~V~Gp~~~~~~~~~---------------~~-~~~~~~~~~g~V~v~DVA~ai~  293 (530)
                      +|..+|.+++.    .+++++++|++.+|||+........               .. ..........++|++|++.++.
T Consensus       143 ~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~  222 (307)
T d1eq2a_         143 SKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNL  222 (307)
T ss_dssp             HHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHH
T ss_pred             ccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHH
Confidence            99999998874    7899999999999999765322111               01 1112233346799999999999


Q ss_pred             HHHhCCCCCCCcEEEEeCCCCCChhHHHHHHHhcCCC
Q 009648          294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ  330 (530)
Q Consensus       294 ~ll~~~~~~~g~vynv~~~~~~t~~~i~ell~~v~g~  330 (530)
                      .++++..   .+.||++++...++.++++++.++.+.
T Consensus       223 ~~~~~~~---~~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         223 WFLENGV---SGIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             HHHHHCC---CEEEEESCSCCBCHHHHHHHC------
T ss_pred             HHhhhcc---ccccccccccchhHHHHHHHHHHhcCC
Confidence            9999875   689999999999999999988776553

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.86  E-value=4.1e-21  Score=187.08  Aligned_cols=214  Identities=13%  Similarity=0.076  Sum_probs=157.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|++|||||+++||+++++.|+++|++|++.+|+.+++..+.+   ++             ..++.++++|+.|.+++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~-------------~~~~~~~~~Dls~~~~i   66 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---AL-------------EAEAIAVVADVSDPKAV   66 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TC-------------CSSEEEEECCTTSHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---Hc-------------CCceEEEEecCCCHHHH
Confidence            568999999999999999999999999999999999987765443   22             25789999999999888


Q ss_pred             HHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCcc
Q 009648          158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++++       +++|++|||||....      +..++...+++|+.+..++.+++...  +.+.++++|+.+...     
T Consensus        67 ~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~-----  141 (241)
T d2a4ka1          67 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-----  141 (241)
T ss_dssp             HHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-----
T ss_pred             HHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-----
Confidence            7666       578999999985422      22335677999999999999987754  334566666554321     


Q ss_pred             ccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHH
Q 009648          223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM  295 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~l  295 (530)
                        ...+..|+.+|++.|.+.+.       .|++++.|.||.|.++...................+.+...+|||+++++|
T Consensus       142 --~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL  219 (241)
T d2a4ka1         142 --AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL  219 (241)
T ss_dssp             --HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred             --ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence              23356799999999988763       789999999999976532111100111111223344567899999999999


Q ss_pred             HhCC-CCCCCcEEEEeCCCC
Q 009648          296 AKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       296 l~~~-~~~~g~vynv~~~~~  314 (530)
                      +.+. .+..|+++.+.++..
T Consensus       220 ~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         220 LSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HSGGGTTCCSCEEEESTTTT
T ss_pred             hcchhCCCcCceEEeCCCcc
Confidence            9754 345788998888853

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.86  E-value=4.1e-21  Score=186.15  Aligned_cols=208  Identities=13%  Similarity=0.100  Sum_probs=154.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC-Hhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~s  156 (530)
                      +++|+||||||+++||+++++.|+++|++|++++|+.+.++.                      .+.+++.+|+++ .+.
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----------------------~~~~~~~~Dv~~~~~~   59 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----------------------SGHRYVVCDLRKDLDL   59 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----------------------TCSEEEECCTTTCHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----------------------cCCcEEEcchHHHHHH
Confidence            467899999999999999999999999999999999765443                      234678899986 355


Q ss_pred             HHHHhCCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCcccccc
Q 009648          157 IEPALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAILN  226 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~~~~  226 (530)
                      +.+.++++|++|||||....      +..++...+++|+.++..+.+++    ++.+.+++|+++|......      ..
T Consensus        60 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~------~~  133 (234)
T d1o5ia_          60 LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP------IE  133 (234)
T ss_dssp             HHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------CT
T ss_pred             HHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc------cc
Confidence            66777899999999995422      22335667889999887777665    4556679999999765332      23


Q ss_pred             chhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCccccccc-ceeecccCcccCCCCCHHHHHHHHHHHHhC
Q 009648          227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELLACMAKN  298 (530)
Q Consensus       227 ~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~-~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~  298 (530)
                      ....|..+|++++.+.+       ..|++++.|.||++.++........ ...........+.+...+|||+++++|+.+
T Consensus       134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence            35679999999987765       2799999999999988753211110 011111223345567899999999999975


Q ss_pred             C-CCCCCcEEEEeCCC
Q 009648          299 R-SLSYCKVVEVIAET  313 (530)
Q Consensus       299 ~-~~~~g~vynv~~~~  313 (530)
                      . .+..|+++.|.++.
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence            4 33578999998874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=9.6e-21  Score=184.91  Aligned_cols=195  Identities=16%  Similarity=0.111  Sum_probs=151.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|+||||||+++||++++++|+++|++|++++|+.++++.+.+++...             ..++.++.+|++|.++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~-------------~~~~~~~~~Dvs~~~~   70 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-------------GAKVHTFVVDCSNRED   70 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEeeCCCHHH
Confidence            567899999999999999999999999999999999999999888877644             2689999999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~  219 (530)
                      +..++       +++|++|||||......      .+++..+++|+.++.++++++    ++++.++||++||..+... 
T Consensus        71 v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~-  149 (244)
T d1yb1a_          71 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS-  149 (244)
T ss_dssp             HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred             HHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC-
Confidence            77665       56899999999653322      224567999999988877664    4567789999999876432 


Q ss_pred             CccccccchhHHHHHHHHHHHHHHH----------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHH
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA  289 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~~----------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA  289 (530)
                           ......|+.+|++.+.+.+.          .|++++.|.||+|.++....          ........+..+|+|
T Consensus       150 -----~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~----------~~~~~~~~~~pe~va  214 (244)
T d1yb1a_         150 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV  214 (244)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred             -----CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC----------cCccccCCCCHHHHH
Confidence                 23356799999998876541          47999999999997653211          011122346799999


Q ss_pred             HHHHHHHhCCC
Q 009648          290 ELLACMAKNRS  300 (530)
Q Consensus       290 ~ai~~ll~~~~  300 (530)
                      +.++..+..+.
T Consensus       215 ~~i~~~~~~~~  225 (244)
T d1yb1a_         215 NRLMHGILTEQ  225 (244)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHhcCC
Confidence            99999887764

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.85  E-value=6.1e-21  Score=189.45  Aligned_cols=213  Identities=12%  Similarity=0.032  Sum_probs=155.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      +++|+||||||+++||+++++.|+++|++|++++|+.++++++.+++                ..++..+.+|+.|.+++
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----------------~~~~~~~~~Dv~~~~~~   66 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----------------GDNVLGIVGDVRSLEDQ   66 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------GGGEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------------CCCeeEEecccccHHHH
Confidence            57899999999999999999999999999999999998877665432                15689999999999887


Q ss_pred             HHHh-------CCCcEEEEcccCCCCcc------C-----CCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCc
Q 009648          158 EPAL-------GNASVVICCIGASEKEV------F-----DITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT  215 (530)
Q Consensus       158 ~~a~-------~~vD~VI~~Ag~~~~~~------~-----~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v  215 (530)
                      ++++       +.+|++|||||......      .     +|...+++|+.++..+++++.    +.+ +++|+++|...
T Consensus        67 ~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~  145 (276)
T d1bdba_          67 KQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAG  145 (276)
T ss_dssp             HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred             HHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechh
Confidence            7765       57899999999542211      1     145678999999888877754    445 68999998755


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH------CCCCEEEEEcCcccCCCcccccc----cce------eecccCccc
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET----HNI------TLSQEDTLF  279 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tIvRPg~V~Gp~~~~~~~----~~~------~~~~~~~~~  279 (530)
                      ...      ......|+.+|++++.+.+.      .+++++.|.||+|.++.......    ...      .........
T Consensus       146 ~~~------~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  219 (276)
T d1bdba_         146 FYP------NGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI  219 (276)
T ss_dssp             TST------TSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT
T ss_pred             ccC------CCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC
Confidence            322      12345799999999887762      45999999999997763211100    000      001112223


Q ss_pred             CCCCCHHHHHHHHHHHHhC--CCCCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~--~~~~~g~vynv~~~~  313 (530)
                      +.+...+|||+++++++..  ..+..|++++|.++.
T Consensus       220 gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         220 GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            4456899999999999852  344679999998874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=5.9e-21  Score=187.02  Aligned_cols=217  Identities=12%  Similarity=0.088  Sum_probs=153.6

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .+++|++|||||+|  +||++++++|+++|++|++.+|++.......+....              ..+..++.+|+.|.
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~   70 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--------------LGGALLFRADVTQD   70 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------------TTCCEEEECCTTCH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc--------------cCcccccccccCCH
Confidence            36789999999998  899999999999999999999987654443332221              14678899999999


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          155 VQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      +++++++       +++|++|||||....          ...++...+++|+.+...+++++...  +-+++|++||...
T Consensus        71 ~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~  150 (256)
T d1ulua_          71 EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS  150 (256)
T ss_dssp             HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence            8877766       578999999985321          11234456889999999999887643  2358999999876


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|++++.+.+.       +|++++.|.||.|..+.........  ..........+.+...+
T Consensus       151 ~~~------~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  224 (256)
T d1ulua_         151 EKV------VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE  224 (256)
T ss_dssp             TSB------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH
T ss_pred             cCC------CCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH
Confidence            432      23356799999999988762       7999999999999876432211110  00011122334567899


Q ss_pred             HHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      |||+++++|+.+.. +..|+++.|.++.
T Consensus       225 dvA~~v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         225 EVGNLGLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhCCccCCeEEECcCE
Confidence            99999999997643 3578899888874

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.85  E-value=3e-20  Score=183.71  Aligned_cols=220  Identities=16%  Similarity=0.145  Sum_probs=160.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      .++++|+||||||+++||+++++.|+++|++|++++|+. +.++.+.+.+++.             ..++.++.+|+.|.
T Consensus        14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~-------------g~~~~~~~~D~~~~   80 (272)
T d1g0oa_          14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN-------------GSDAACVKANVGVV   80 (272)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------------TCCEEEEECCTTCH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh-------------CCceeeEeCCCCCH
Confidence            357899999999999999999999999999999998875 4555555554433             26789999999999


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCC
Q 009648          155 VQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~  219 (530)
                      +++.+++       +++|++|||+|....      ...++...+++|+.++..+++++...  .-+++++++|.......
T Consensus        81 ~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~  160 (272)
T d1g0oa_          81 EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA  160 (272)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS
T ss_pred             HHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc
Confidence            8877666       578999999986432      22335567899999999999998753  33588888886442221


Q ss_pred             CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc------ccccee-------ecccCccc
Q 009648          220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHNIT-------LSQEDTLF  279 (530)
Q Consensus       220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~------~~~~~~-------~~~~~~~~  279 (530)
                           ......|+.+|++.+.+.+       ..|++++.|+||+|.++.....      ......       ........
T Consensus       161 -----~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  235 (272)
T d1g0oa_         161 -----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL  235 (272)
T ss_dssp             -----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT
T ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC
Confidence                 2334569999999998876       3799999999999976531110      000000       01112334


Q ss_pred             CCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      +.+...+|||+++++|+.+.. +..|+++.|.++.
T Consensus       236 gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         236 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            567889999999999997543 3478889888874

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=1.1e-20  Score=185.55  Aligned_cols=216  Identities=14%  Similarity=0.117  Sum_probs=159.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHh---CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~---~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .+++|.++||||+++||+++++.|++   +|++|++++|+.++++.+.+++...           ....++.++.+|++|
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~-----------~~~~~~~~~~~Dvs~   71 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-----------QPDLKVVLAAADLGT   71 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTSEEEEEECCTTS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhh-----------cCCceEEEEEccCCC
Confidence            46788999999999999999999986   6999999999999998888777643           112578999999999


Q ss_pred             HhhHHHHhC-----------CCcEEEEcccCCCC---------ccCCCCcchHhHHHHHHHHHHHHHhc----C--CCEE
Q 009648          154 RVQIEPALG-----------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA----K--VNHF  207 (530)
Q Consensus       154 ~~sl~~a~~-----------~vD~VI~~Ag~~~~---------~~~~~~~~~~vNv~gt~~Ll~aa~~~----g--v~r~  207 (530)
                      .++++++++           ..|++|||||....         +..++...+++|+.++..+.+++...    +  .++|
T Consensus        72 ~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~I  151 (259)
T d1oaaa_          72 EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV  151 (259)
T ss_dssp             HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred             HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccc
Confidence            988877752           35899999985421         11235567999999999999988753    2  3589


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-----CCCCEEEEEcCcccCCCccccc-c-c--cee-ecccCc
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE-T-H--NIT-LSQEDT  277 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tIvRPg~V~Gp~~~~~~-~-~--~~~-~~~~~~  277 (530)
                      |++||......      ...+..|+.+|++++.+.+.     .|++++.|.||+|.++...... . .  ... ......
T Consensus       152 v~isS~~~~~~------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  225 (259)
T d1oaaa_         152 VNISSLCALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK  225 (259)
T ss_dssp             EEECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             cccccccccCC------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC
Confidence            99999866332      23356799999999877763     7999999999999876321100 0 0  000 000111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      ..+.....+|+|+++++++.+..+..|+++++
T Consensus       226 ~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         226 SDGALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             HTTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             CCCCCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            22345789999999999998776667777765

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.84  E-value=3.1e-20  Score=182.44  Aligned_cols=219  Identities=15%  Similarity=0.135  Sum_probs=157.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc-hhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~-~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.+|+||||||+++||+++++.|+++|++|++++|+. +..+.+.+++.+.         |    .++.++.+|++|.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~---------g----~~~~~~~~D~~~~~   69 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---------G----AQGVAIQADISKPS   69 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc---------C----CCceEecCCCCCHH
Confidence            36789999999999999999999999999999876554 4466666666544         2    57899999999998


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      ++++++       +++|++|||||....      +..++...+++|+.+..++++++..+  .-+++++++|......+.
T Consensus        70 ~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~  149 (259)
T d1ja9a_          70 EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI  149 (259)
T ss_dssp             HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC
T ss_pred             HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC
Confidence            887766       478999999996532      22234567999999999999888753  234777777764433332


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-------cccce------eecccCcccC
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------ETHNI------TLSQEDTLFG  280 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-------~~~~~------~~~~~~~~~~  280 (530)
                           .....|+.+|++.+.+.+.       .|++++.|.||++.++.....       .....      .........+
T Consensus       150 -----~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~  224 (259)
T d1ja9a_         150 -----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK  224 (259)
T ss_dssp             -----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred             -----CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC
Confidence                 2345799999999887762       699999999999976521100       00000      0001122234


Q ss_pred             CCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCC
Q 009648          281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET  313 (530)
Q Consensus       281 g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~  313 (530)
                      .+...+|||+++++|+.+.. +..|+++.|.++.
T Consensus       225 R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         225 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            56789999999999998653 3468888888764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.6e-20  Score=183.39  Aligned_cols=214  Identities=15%  Similarity=0.102  Sum_probs=157.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++++|++|||||+++||+++++.|+++|++|++++|++++++++.+                  ..+++...+|+.+.+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------------------~~~~~~~~~d~~~~~~   64 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------------------YPGIQTRVLDVTKKKQ   64 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------------------STTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------------------ccCCceeeeecccccc
Confidence            4678999999999999999999999999999999999876554321                  2568888999988766


Q ss_pred             HHHHh---CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEEcCCCccCCCCccc
Q 009648          157 IEPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       157 l~~a~---~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                      ++..+   .++|++|||||....      +..++...+++|+.++..+.+++.    +.+.++||++||......+    
T Consensus        65 ~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----  140 (245)
T d2ag5a1          65 IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----  140 (245)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----
T ss_pred             ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC----
Confidence            55544   689999999996433      233456779999999888877765    4466799999987553222    


Q ss_pred             cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccc------ceeecccCcccCCCCCHHHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH------NITLSQEDTLFGGQVSNLQVAE  290 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~------~~~~~~~~~~~~g~V~v~DVA~  290 (530)
                       ......|+.+|++.+.+++.       .|++++.|.||+|.++........      ...........+.+...+|||+
T Consensus       141 -~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~  219 (245)
T d2ag5a1         141 -VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM  219 (245)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred             -ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence             23456799999999988763       799999999999987642211000      0000111233445678999999


Q ss_pred             HHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          291 LLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       291 ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ++.+|+.+. .+..|+++.|.++.
T Consensus       220 ~v~fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         220 LCVYLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHhChhhCCCcCceEEeCCCc
Confidence            999999764 34578999988874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.83  E-value=6.6e-20  Score=179.84  Aligned_cols=215  Identities=14%  Similarity=0.071  Sum_probs=154.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~  155 (530)
                      ..++|+||||||+++||+.++++|+++|++|+++.|+.++...+.+. ...           ....++.++.+|+. +.+
T Consensus         2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~-~~~-----------~~~~~~~~~~~d~~~~~~   69 (254)
T d1sbya1           2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAEL-KAI-----------NPKVNITFHTYDVTVPVA   69 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHH-HHH-----------CTTSEEEEEECCTTSCHH
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHH-Hhh-----------CCCCCEEEEEeecCCCHH
Confidence            36789999999999999999999999999999999988776554332 221           12357899999997 555


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHh----c---CCCEEEEEcCCCccCCCCc
Q 009648          156 QIEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI----A---KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~----~---gv~r~V~iSS~~v~~~~~~  221 (530)
                      ++++++       +++|++|||||...  ..+++..+++|+.++.++.+++..    .   ..++||++||......   
T Consensus        70 ~~~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~---  144 (254)
T d1sbya1          70 ESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA---  144 (254)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---
T ss_pred             HHHHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC---
Confidence            555544       67999999999653  456778899999999988887653    2   2468999999876332   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeec--ccCcccCCCCCHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~--~~~~~~~g~V~v~DVA~ai  292 (530)
                         ...+..|+.+|++...+.+       ..|++++.|.||+|.++.........-...  ............+++|+++
T Consensus       145 ---~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~  221 (254)
T d1sbya1         145 ---IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             ---CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHH
Confidence               2335679999999887765       379999999999998763111100000000  0001111234689999999


Q ss_pred             HHHHhCCCCCCCcEEEEeCCC
Q 009648          293 ACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       293 ~~ll~~~~~~~g~vynv~~~~  313 (530)
                      +.+++...  .|+++.+.++.
T Consensus       222 ~~~~~~~~--tG~vi~vdgG~  240 (254)
T d1sbya1         222 VKAIEANK--NGAIWKLDLGT  240 (254)
T ss_dssp             HHHHHHCC--TTCEEEEETTE
T ss_pred             HHhhhCCC--CCCEEEECCCE
Confidence            99988764  68889888874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.83  E-value=1.2e-19  Score=180.88  Aligned_cols=219  Identities=14%  Similarity=0.141  Sum_probs=155.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|++|||||+|+||+++++.|+++|++|++++|+..++..+.+++...        .    ...+.++.+|+.|.++
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--------~----g~~~~~~~~D~~~~~~   89 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--------T----GNKVHAIQCDVRDPDM   89 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------H----SSCEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--------c----CCceEEEEecccChHH
Confidence            477899999999999999999999999999999999998888777655432        1    2578899999999988


Q ss_pred             HHHHh-------CCCcEEEEcccCCCCccC------CCCcchHhHHHHHHHHHHHHH-----hcCCCEEEEEcCCCccCC
Q 009648          157 IEPAL-------GNASVVICCIGASEKEVF------DITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF  218 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~~~~------~~~~~~~vNv~gt~~Ll~aa~-----~~gv~r~V~iSS~~v~~~  218 (530)
                      +++++       .++|++|||||.......      ++...+.+|+.+...+...+.     ..+.+.++.+++......
T Consensus        90 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~  169 (294)
T d1w6ua_          90 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG  169 (294)
T ss_dssp             HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred             HHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc
Confidence            77655       578999999996533221      234457778777766655533     234456777777644221


Q ss_pred             CCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--ccce-eecccCcccCCCCCHHHH
Q 009648          219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--THNI-TLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--~~~~-~~~~~~~~~~g~V~v~DV  288 (530)
                            ......|+.+|.+.+.+.+.       .|++++.|.||+|.++......  .... .........+.+...+||
T Consensus       170 ------~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi  243 (294)
T d1w6ua_         170 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL  243 (294)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred             ------ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHH
Confidence                  12345699999999988762       7899999999999876432111  1100 111112334456789999


Q ss_pred             HHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          289 AELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       289 A~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |+++.+|+.+. .+..|+++.|.++.
T Consensus       244 A~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         244 ANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHhCchhcCCCCcEEEECCCh
Confidence            99999999764 33579999998874

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.4e-19  Score=174.38  Aligned_cols=210  Identities=14%  Similarity=0.122  Sum_probs=151.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|++|||||+++||++++++|+++|++|++++|+.++++.+.+++.                .....+.+|+.+.+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----------------~~~~~~~~~~~~~~~   65 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------------NNCVFAPADVTSEKD   65 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------------TTEEEEECCTTCHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------------CCccccccccccccc
Confidence            4678999999999999999999999999999999999988877655432                567888899998766


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------------ccCCCCcchHhHHHHHHHHHHHHHhc----------CCCEE
Q 009648          157 IEPAL-------GNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHF  207 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------------~~~~~~~~~~vNv~gt~~Ll~aa~~~----------gv~r~  207 (530)
                      ++..+       ...|.++++++....            ...++...+++|+.++.++.+++..+          +.++|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~I  145 (248)
T d2o23a1          66 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVI  145 (248)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred             ccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEE
Confidence            55444       467999988764321            11234566899999999999887542          34589


Q ss_pred             EEEcCCCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccce-eecccCccc
Q 009648          208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLF  279 (530)
Q Consensus       208 V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~-~~~~~~~~~  279 (530)
                      |++||......      ......|+.+|.+.+.+.+.       .|++++.|.||++.++.......... .+.....+.
T Consensus       146 i~isS~~~~~~------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~  219 (248)
T d2o23a1         146 INTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP  219 (248)
T ss_dssp             EEECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred             EEecchhhccC------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCC
Confidence            99999876332      23356799999999988763       78999999999998764321111100 111111122


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 009648          280 GGQVSNLQVAELLACMAKNRSLSYCKVVEV  309 (530)
Q Consensus       280 ~g~V~v~DVA~ai~~ll~~~~~~~g~vynv  309 (530)
                      +.+...+|||+++++++++. +..|++++|
T Consensus       220 ~R~g~peevA~~v~fL~s~~-~itGq~I~v  248 (248)
T d2o23a1         220 SRLGDPAEYAHLVQAIIENP-FLNGEVIRL  248 (248)
T ss_dssp             CSCBCHHHHHHHHHHHHHCT-TCCSCEEEE
T ss_pred             CCCcCHHHHHHHHHHHHhCC-CCCceEeEC
Confidence            44678999999999999864 456887765

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.82  E-value=3.1e-20  Score=186.73  Aligned_cols=205  Identities=16%  Similarity=0.049  Sum_probs=148.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc---------hhHHHHHHHHHHhhhhccccccCCCCCCCeEEE
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV  147 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~---------~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v  147 (530)
                      ..++|++|||||+++||+++++.|+++|++|++.+|+.         ..++.+.+++..                ....+
T Consensus         4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~   67 (302)
T d1gz6a_           4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----------------RGGKA   67 (302)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----------------TTCEE
T ss_pred             CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh----------------ccccc
Confidence            46789999999999999999999999999999987754         334444443332                22445


Q ss_pred             EecCCCHhhHHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHH----hcCCCEEEEE
Q 009648          148 ECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMV  210 (530)
Q Consensus       148 ~~Dl~d~~sl~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~----~~gv~r~V~i  210 (530)
                      .+|+.|.+++++++       +++|++|||||....      +..++...+++|+.++.++++++.    +++-++||++
T Consensus        68 ~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~i  147 (302)
T d1gz6a_          68 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMT  147 (302)
T ss_dssp             EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEe
Confidence            67888876655444       579999999996532      233456779999999888877754    5577799999


Q ss_pred             cCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCC
Q 009648          211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV  283 (530)
Q Consensus       211 SS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V  283 (530)
                      ||......      ......|+.+|++++.+.+       ..|++++.|.||++..........          .....+
T Consensus       148 sS~~~~~~------~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~----------~~~~~~  211 (302)
T d1gz6a_         148 ASASGIYG------NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE----------DLVEAL  211 (302)
T ss_dssp             CCHHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH----------HHHHHS
T ss_pred             CChhhcCC------CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH----------hhHhcC
Confidence            99865322      2234679999999988765       379999999999885543211100          011235


Q ss_pred             CHHHHHHHHHHHHhCCCCCCCcEEEEeCCC
Q 009648          284 SNLQVAELLACMAKNRSLSYCKVVEVIAET  313 (530)
Q Consensus       284 ~v~DVA~ai~~ll~~~~~~~g~vynv~~~~  313 (530)
                      ..+|||.++++|+.+.....|+++.+.++.
T Consensus       212 ~PedvA~~v~fL~S~~a~itG~~i~vdGG~  241 (302)
T d1gz6a_         212 KPEYVAPLVLWLCHESCEENGGLFEVGAGW  241 (302)
T ss_dssp             CGGGTHHHHHHHTSTTCCCCSCEEEEETTE
T ss_pred             CHHHHHHHHHHHcCCCcCCCCcEEEeCCCc
Confidence            689999999999976555578888887763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.82  E-value=4.4e-20  Score=180.75  Aligned_cols=208  Identities=14%  Similarity=0.074  Sum_probs=148.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL  161 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~  161 (530)
                      ++|||||+++||+.+++.|+++|++|++++|+.++.+++......                   ++.+|+.|.+++++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------------------~~~~dv~~~~~~~~~~   62 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------------------YPQLKPMSEQEPAELI   62 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------------------CTTSEECCCCSHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------------------EEEeccCCHHHHHHHH
Confidence            689999999999999999999999999999998887766442221                   1236666655544443


Q ss_pred             -------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCccc
Q 009648          162 -------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA  223 (530)
Q Consensus       162 -------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~  223 (530)
                             +++|++|||||....       +..++...+++|+.++.++++++    ++++.++||++||......     
T Consensus        63 ~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-----  137 (252)
T d1zmta1          63 EAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----  137 (252)
T ss_dssp             HHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-----
Confidence                   679999999985321       22235567889999988877765    4556789999999876332     


Q ss_pred             cccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccc-cc-------eeecccCcccCCCCCHHHH
Q 009648          224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HN-------ITLSQEDTLFGGQVSNLQV  288 (530)
Q Consensus       224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~-~~-------~~~~~~~~~~~g~V~v~DV  288 (530)
                       ......|+.+|.+++.+.+       ..|++++.|.||+|.++....... ..       ..........+.+...+||
T Consensus       138 -~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedv  216 (252)
T d1zmta1         138 -WKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKEL  216 (252)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHH
T ss_pred             -cccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence             2234679999999998876       379999999999998764321100 00       0000111223456789999


Q ss_pred             HHHHHHHHhCCC-CCCCcEEEEeCCCC
Q 009648          289 AELLACMAKNRS-LSYCKVVEVIAETT  314 (530)
Q Consensus       289 A~ai~~ll~~~~-~~~g~vynv~~~~~  314 (530)
                      |+++++|+.+.. +..|+++.|.++..
T Consensus       217 A~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         217 GELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             HHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             HHHHHHHhCchhcCCcCCeEEECCCce
Confidence            999999997654 35789999998854

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.80  E-value=9.2e-19  Score=170.50  Aligned_cols=165  Identities=16%  Similarity=0.135  Sum_probs=125.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHh---CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~---~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ||+||||||+++||+++++.|++   +|++|++++|+.++++.+.+..+.              ..++.++.+|++|.++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dvs~~~~   67 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--------------HSNIHILEIDLRNFDA   67 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH--------------CTTEEEEECCTTCGGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc--------------CCcEEEEEEEeccHHH
Confidence            57899999999999999999974   689999999999988776543222              2689999999999988


Q ss_pred             HHHHh---------CCCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hc-----------CCC
Q 009648          157 IEPAL---------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IA-----------KVN  205 (530)
Q Consensus       157 l~~a~---------~~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~-----------gv~  205 (530)
                      +++++         .++|++|||||....       +..++...+++|+.++..+++++.    +.           +.+
T Consensus        68 v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g  147 (248)
T d1snya_          68 YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA  147 (248)
T ss_dssp             HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC
T ss_pred             HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccc
Confidence            77654         358999999996422       112245678999999888877754    21           357


Q ss_pred             EEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCC
Q 009648          206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT  261 (530)
Q Consensus       206 r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~  261 (530)
                      ++|++||......+.   ....+..|+.+|++...+.+       ..|++++.|.||+|.++.
T Consensus       148 ~ii~i~S~~g~~~~~---~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         148 AIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             EEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             ccccccccccccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            999999975432221   12345689999999887765       378999999999998763

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=2.8e-19  Score=178.11  Aligned_cols=205  Identities=14%  Similarity=0.142  Sum_probs=142.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEE---EEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~---~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +|.||||||+++||+++++.|+++|++|+   +..|+.+....+.+..+...          ....++.++.+|++|.++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~Dv~~~~~   71 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA----------CPPGSLETLQLDVRDSKS   71 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT----------CCTTSEEEEECCTTCHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh----------ccCCceEEEeccccchHh
Confidence            46789999999999999999999997654   44566665555554444331          223689999999999999


Q ss_pred             HHHHh-----CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCc
Q 009648          157 IEPAL-----GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       157 l~~a~-----~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~  221 (530)
                      +.+++     +.+|++|||||....      +..++...+++|+.|+.++.+++    ++++.++||++||......   
T Consensus        72 ~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~---  148 (285)
T d1jtva_          72 VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG---  148 (285)
T ss_dssp             HHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC---
T ss_pred             hhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC---
Confidence            88877     358999999986432      22345667999999988877764    4567789999999866332   


Q ss_pred             cccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccc-cccceeecc----------------cCc
Q 009648          222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQ----------------EDT  277 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~-~~~~~~~~~----------------~~~  277 (530)
                         ......|+.+|++.+.+.+       ..|++++.|.||+|.++..... ....-....                ...
T Consensus       149 ---~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T d1jtva_         149 ---LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV  225 (285)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence               2234579999999887765       3799999999999987632111 000000000                001


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCC
Q 009648          278 LFGGQVSNLQVAELLACMAKNRS  300 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~  300 (530)
                      ........+|||++|+++++.+.
T Consensus       226 ~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         226 FREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             HHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             hcccCCCHHHHHHHHHHHHhCCC
Confidence            11124679999999999998764

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=9.5e-19  Score=173.00  Aligned_cols=189  Identities=17%  Similarity=0.104  Sum_probs=139.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +.+|||||+++||+++++.|+++ |++|++.+|+.++++.+.++++..             ..+++++.+|+.|.+++++
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dvs~~~sv~~   70 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-------------GLSPRFHQLDIDDLQSIRA   70 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-------------TCCCEEEECCTTCHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEEEecCCHHHHHH
Confidence            34499999999999999999986 899999999999998888777653             2578999999999988776


Q ss_pred             Hh-------CCCcEEEEcccCCCCcc------CCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCC------
Q 009648          160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF------  218 (530)
Q Consensus       160 a~-------~~vD~VI~~Ag~~~~~~------~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~------  218 (530)
                      ++       +++|++|||||......      .++...+++|+.++..+.+++...  .-+|+|++||......      
T Consensus        71 ~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~  150 (275)
T d1wmaa1          71 LRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSP  150 (275)
T ss_dssp             HHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCH
T ss_pred             HHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccch
Confidence            65       57899999999653221      124456899999999999998753  2359999999643100      


Q ss_pred             ---------C--------------------CccccccchhHHHHHHHHHHHHHH-------H----CCCCEEEEEcCccc
Q 009648          219 ---------G--------------------FPAAILNLFWGVLLWKRKAEEALI-------A----SGLPYTIVRPGGME  258 (530)
Q Consensus       219 ---------~--------------------~~~~~~~~~~~Y~~sK~~~E~~l~-------~----~gl~~tIvRPg~V~  258 (530)
                               +                    .......+...|+.+|+....+.+       .    .|++++.|.||+|.
T Consensus       151 y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~  230 (275)
T d1wmaa1         151 ELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  230 (275)
T ss_dssp             HHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             hhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence                     0                    000011223469999998775542       1    48999999999997


Q ss_pred             CCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHh
Q 009648          259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK  297 (530)
Q Consensus       259 Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~  297 (530)
                      ++....               ....+.+|+|+.+++++.
T Consensus       231 T~m~~~---------------~~~~~pee~A~~~~~~a~  254 (275)
T d1wmaa1         231 TDMAGP---------------KATKSPEEGAETPVYLAL  254 (275)
T ss_dssp             STTTCT---------------TCSBCHHHHTHHHHHHHS
T ss_pred             CCcccC---------------cccCCHHHHHHHHHHHHc
Confidence            653211               123468999999999874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.78  E-value=1.9e-18  Score=168.50  Aligned_cols=198  Identities=14%  Similarity=0.049  Sum_probs=135.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .+|+||||||+++||++++++|+++|+  +|++.+|+.++++++.+                ....+++++.+|++|.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----------------~~~~~~~~~~~Dvs~~~~   65 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----------------IKDSRVHVLPLTVTCDKS   65 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----------------CCCTTEEEEECCTTCHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----------------hhCCceEEEEEecCCHHH
Confidence            358999999999999999999999995  78889999988776532                123689999999999988


Q ss_pred             HHHHh-------C--CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHH----hc-----------CCC
Q 009648          157 IEPAL-------G--NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IA-----------KVN  205 (530)
Q Consensus       157 l~~a~-------~--~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~----~~-----------gv~  205 (530)
                      +++++       +  ++|+||||||....       +..++...+++|+.++.++.+++.    +.           ...
T Consensus        66 v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~  145 (250)
T d1yo6a1          66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA  145 (250)
T ss_dssp             HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceec
Confidence            77665       2  48999999996422       111245679999999988877754    21           125


Q ss_pred             EEEEEcCCCccCCC-CccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeecccCc
Q 009648          206 HFIMVSSLGTNKFG-FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT  277 (530)
Q Consensus       206 r~V~iSS~~v~~~~-~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~  277 (530)
                      ++|.+|+....... .......+...|+.+|++...+.+       ..|++++.|.||+|-++...              
T Consensus       146 ~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~--------------  211 (250)
T d1yo6a1         146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG--------------  211 (250)
T ss_dssp             EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred             cccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC--------------
Confidence            78888875432221 111123345679999999887765       37899999999999765211              


Q ss_pred             ccCCCCCHHHHHHHHHHHHhCCCCC-CCcEE
Q 009648          278 LFGGQVSNLQVAELLACMAKNRSLS-YCKVV  307 (530)
Q Consensus       278 ~~~g~V~v~DVA~ai~~ll~~~~~~-~g~vy  307 (530)
                       ....++.++.++.++.++...... .|+.|
T Consensus       212 -~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~  241 (250)
T d1yo6a1         212 -KNAALTVEQSTAELISSFNKLDNSHNGRFF  241 (250)
T ss_dssp             --------HHHHHHHHHHHTTCCGGGTTCEE
T ss_pred             -CCCCCCHHHHHHHHHHHHhcCCCCCCeEEE
Confidence             112367899999999988764432 34444

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.78  E-value=1.3e-18  Score=170.09  Aligned_cols=199  Identities=19%  Similarity=0.146  Sum_probs=143.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchh---HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..++||||||+|+||+++++.|+++|+ +|+++.|+..+   ...+.++++..             ..++.++.+|++|.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-------------g~~v~~~~~Dv~d~   74 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-------------GARTTVAACDVTDR   74 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-------------TCEEEEEECCTTCH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-------------cccccccccccchH
Confidence            346999999999999999999999998 58888897543   44444433322             25799999999999


Q ss_pred             hhHHHHhC------CCcEEEEcccCCCCc------cCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcc
Q 009648          155 VQIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA  222 (530)
Q Consensus       155 ~sl~~a~~------~vD~VI~~Ag~~~~~------~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~  222 (530)
                      ++++++++      ++|.||||+|.....      ..++...+++|+.+..+|.+++...+.++||++||......    
T Consensus        75 ~~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g----  150 (259)
T d2fr1a1          75 ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFG----  150 (259)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTC----
T ss_pred             HHHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccC----
Confidence            99888874      479999999964332      12234568899999999999998888889999999865332    


Q ss_pred             ccccchhHHHHHHHHHHHHHH---HCCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHHHHHHhCC
Q 009648          223 AILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR  299 (530)
Q Consensus       223 ~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~  299 (530)
                        ......|+.+|...+.+.+   ..|++++.|.||.+.+.+-...... -.+.   ......++.+++++++..++.+.
T Consensus       151 --~~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~-~~~~---~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         151 --APGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVA-DRFR---RHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             --CTTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CT---TTTEECBCHHHHHHHHHHHHHTT
T ss_pred             --CcccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchHH-HHHH---hcCCCCCCHHHHHHHHHHHHhCC
Confidence              1223569999999887765   4899999999999876542111000 0001   11113478999999999999887


Q ss_pred             C
Q 009648          300 S  300 (530)
Q Consensus       300 ~  300 (530)
                      .
T Consensus       225 ~  225 (259)
T d2fr1a1         225 E  225 (259)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.9e-18  Score=166.37  Aligned_cols=198  Identities=15%  Similarity=0.121  Sum_probs=144.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +.++|+||||||+++||+++++.|+++|++|++++|+.++++++.+++...            ....+.++.+|+.+.+.
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~------------~~~~~~~~~~d~~~~~~   78 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL------------GAASAHYIAGTMEDMTF   78 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH------------TCSEEEEEECCTTCHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh------------hcccchhhhhhhhhHHH
Confidence            478899999999999999999999999999999999999988877655433            12567888999998766


Q ss_pred             HHHHh-------CCCcEEEEcccCCCC------ccCCCCcchHhHHHHHHHHHHHHHh---cCCCEEEEEcCCCccCCCC
Q 009648          157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       157 l~~a~-------~~vD~VI~~Ag~~~~------~~~~~~~~~~vNv~gt~~Ll~aa~~---~gv~r~V~iSS~~v~~~~~  220 (530)
                      +...+       +.+|++|||||....      +..++...+++|+.++..+.+++..   .+-+++|++||.+....  
T Consensus        79 ~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~--  156 (269)
T d1xu9a_          79 AEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA--  156 (269)
T ss_dssp             HHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC--
T ss_pred             HHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC--
Confidence            55433       578999999985432      2223456689999988877776542   23469999999876332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ......|+.+|++++.+.+.         .|++++.|.||+|.++.....        ..+......++.+++|+.
T Consensus       157 ----~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~--------~~~~~~~~~~~~e~~a~~  224 (269)
T d1xu9a_         157 ----YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA--------VSGIVHMQAAPKEECALE  224 (269)
T ss_dssp             ----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH--------SCGGGGGGCBCHHHHHHH
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh--------ccCCccccCCCHHHHHHH
Confidence                23356899999998876541         468999999999976521100        001111224678999999


Q ss_pred             HHHHHhCCC
Q 009648          292 LACMAKNRS  300 (530)
Q Consensus       292 i~~ll~~~~  300 (530)
                      ++..+....
T Consensus       225 i~~~~~~~~  233 (269)
T d1xu9a_         225 IIKGGALRQ  233 (269)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHhhcCC
Confidence            998776554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=1.2e-17  Score=162.70  Aligned_cols=216  Identities=13%  Similarity=0.103  Sum_probs=151.9

Q ss_pred             CCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +++|+||||||+|  +||+++++.|+++|++|++.+|++.....+.+....              .....++..|+.+..
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~   68 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--------------LGSDIVLQCDVAEDA   68 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH--------------TTCCCEEECCTTCHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh--------------cCCcceeecccchHH
Confidence            6789999999998  899999999999999999999997655544332222              246678889999877


Q ss_pred             hHHHHh-------CCCcEEEEcccCCCCccCC-----------CCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCc
Q 009648          156 QIEPAL-------GNASVVICCIGASEKEVFD-----------ITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT  215 (530)
Q Consensus       156 sl~~a~-------~~vD~VI~~Ag~~~~~~~~-----------~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v  215 (530)
                      ++...+       ...|++|||++.......+           +...+.+|+.+...+.+++...  +.+.+|++||.+.
T Consensus        69 ~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~  148 (258)
T d1qsga_          69 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA  148 (258)
T ss_dssp             HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhh
Confidence            766555       4579999999864322211           1233556677777777777653  3347899999765


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccccccee--ecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~~~--~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|.+.+.+.+.       +|++++.|+||+|.++...........  ........+.+...+
T Consensus       149 ~~~------~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe  222 (258)
T d1qsga_         149 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE  222 (258)
T ss_dssp             TSB------CTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccC------CCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH
Confidence            332      22345799999999988763       789999999999988753321111100  011122334568899


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |||+++.+|+.+. .+..|+++.|.++.
T Consensus       223 eia~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         223 DVGNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhcCccCceEEECcCH
Confidence            9999999999764 34578899998884

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.74  E-value=5.3e-18  Score=164.03  Aligned_cols=196  Identities=13%  Similarity=0.102  Sum_probs=139.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|+||||||+|+||+++++.|+++|++|.+++|+.....                       ....++.+|..+.+.+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~   57 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQAD   57 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------------cccceeecccCcHHHHH
Confidence            4789999999999999999999999999999998764211                       23344455665544433


Q ss_pred             H-------HhC--CCcEEEEcccCCCC-------ccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCC
Q 009648          159 P-------ALG--NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF  220 (530)
Q Consensus       159 ~-------a~~--~vD~VI~~Ag~~~~-------~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~  220 (530)
                      .       .++  ++|++|||||....       ...++...+++|+.++.++.+++..+  +.++||++||......  
T Consensus        58 ~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~--  135 (236)
T d1dhra_          58 QVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG--  135 (236)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--
T ss_pred             HHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCC--
Confidence            2       222  48999999985321       11224566899999999999888753  3369999999866332  


Q ss_pred             ccccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHH
Q 009648          221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL  291 (530)
Q Consensus       221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~a  291 (530)
                          ...+..|+.+|++++.+.+.         .|++++.|.||+|.++.....        .....+..++..+|+|+.
T Consensus       136 ----~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~pe~va~~  203 (236)
T d1dhra_         136 ----TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS--------MPEADFSSWTPLEFLVET  203 (236)
T ss_dssp             ----CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH--------STTSCGGGSEEHHHHHHH
T ss_pred             ----ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh--------CccchhhcCCCHHHHHHH
Confidence                23356899999999988763         479999999999987642111        111123456789999999


Q ss_pred             HHHHHhCCCC-CCCcEEEEeC
Q 009648          292 LACMAKNRSL-SYCKVVEVIA  311 (530)
Q Consensus       292 i~~ll~~~~~-~~g~vynv~~  311 (530)
                      +++++..... ..|+.+.|..
T Consensus       204 ~~~l~s~~~~~i~G~~i~v~~  224 (236)
T d1dhra_         204 FHDWITGNKRPNSGSLIQVVT  224 (236)
T ss_dssp             HHHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHHhCCCccCCCCCeEEEEE
Confidence            9999976542 4577776644

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.73  E-value=1.5e-16  Score=156.50  Aligned_cols=227  Identities=13%  Similarity=0.055  Sum_probs=143.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC-chhHHHHHHHHHHhhhhcccc-----ccCCCCCCCeEEEEecCCCH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELA-----NKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~-~~k~~~l~~~~~~~~l~~~~~-----~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ..+|||||+++||+++++.|+++|++|++++|+ .+..+.+.+++....-.....     .........+....+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            478999999999999999999999999998775 455666666555431000000     00000112233445668887


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCCcc------CCCC--------------cchHhHHHHHHHHHHHHHh------
Q 009648          155 VQIEPAL-------GNASVVICCIGASEKEV------FDIT--------------GPYRIDFQATKNLVDAATI------  201 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~~~------~~~~--------------~~~~vNv~gt~~Ll~aa~~------  201 (530)
                      +++++++       +++|++|||||......      .++.              ..+.+|+.+...+.+++.+      
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            7777665       67999999999643211      1111              2467888888888887543      


Q ss_pred             ----cCCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccce
Q 009648          202 ----AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI  270 (530)
Q Consensus       202 ----~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~  270 (530)
                          .+..++|++++......      ......|+.+|.+.+.+.+       ..|++++.|.||++....+....... 
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~-  235 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQP------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWE-  235 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHH-
T ss_pred             HHhcCCCCcccccccccccCC------ccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHHHH-
Confidence                23447888888765332      2234679999999998876       27999999999975432211100000 


Q ss_pred             eecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCCC
Q 009648          271 TLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETT  314 (530)
Q Consensus       271 ~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~~  314 (530)
                      .......+.+.+...+|||+++++|+.+. .+..|+++.|.++..
T Consensus       236 ~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         236 GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence            00011112345678999999999999764 335789999988853

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=2.2e-17  Score=158.65  Aligned_cols=202  Identities=16%  Similarity=0.105  Sum_probs=142.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |++|||||+++||+++++.|+++|++|++++|+.+.                         .++..+++|+.+...+..+
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------------------~~~~~~~~d~~~~~~~~~~   56 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------------------EDLIYVEGDVTREEDVRRA   56 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------------------SSSEEEECCTTCHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------------------ccceEeeccccchhhhHHH
Confidence            789999999999999999999999999999998642                         3567788999987665555


Q ss_pred             h------CCCcEEEEcccCCCC----------ccCCCCcchHhHHHHHHHHHHHHHh----------cCCCEEEEEcCCC
Q 009648          161 L------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATI----------AKVNHFIMVSSLG  214 (530)
Q Consensus       161 ~------~~vD~VI~~Ag~~~~----------~~~~~~~~~~vNv~gt~~Ll~aa~~----------~gv~r~V~iSS~~  214 (530)
                      +      ...+.++++++....          ....+...+++|+.+..++++.+..          .+.++||++||..
T Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~  136 (241)
T d1uaya_          57 VARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVA  136 (241)
T ss_dssp             HHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTH
T ss_pred             HHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchh
Confidence            4      244666666653211          1112345578888888877776542          2446999999986


Q ss_pred             ccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc-eeecccCcccCCCCCHH
Q 009648          215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       215 v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~-~~~~~~~~~~~g~V~v~  286 (530)
                      ....      ......|+.+|++++.+.+.       +|++++.|.||+|.++......... ..+.......+.+...+
T Consensus       137 ~~~~------~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pe  210 (241)
T d1uaya_         137 AFEG------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE  210 (241)
T ss_dssp             HHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHH
T ss_pred             hccC------CCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHH
Confidence            5322      22356799999999988762       7999999999999875321111000 01111122224456899


Q ss_pred             HHHHHHHHHHhCCCCCCCcEEEEeCCCC
Q 009648          287 QVAELLACMAKNRSLSYCKVVEVIAETT  314 (530)
Q Consensus       287 DVA~ai~~ll~~~~~~~g~vynv~~~~~  314 (530)
                      |||+++++|+.+. +..|+++.|.++..
T Consensus       211 dvA~~v~fL~s~~-~iTG~~i~VDGG~~  237 (241)
T d1uaya_         211 EYAALVLHILENP-MLNGEVVRLDGALR  237 (241)
T ss_dssp             HHHHHHHHHHHCT-TCCSCEEEESTTCC
T ss_pred             HHHHHHHHHHhCC-CCCCCEEEECCccc
Confidence            9999999999864 46799999988754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.72  E-value=1.3e-17  Score=160.91  Aligned_cols=196  Identities=14%  Similarity=0.068  Sum_probs=137.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH-
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE-  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~-  158 (530)
                      ..+||||||+|+||+++++.|+++|++|++++|+.....                       .....+.+|+.+.+... 
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~   58 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQS   58 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------------------cccceeccccCchhHHHH
Confidence            357999999999999999999999999999999875311                       23344556766543322 


Q ss_pred             ------HHh--CCCcEEEEcccCCCCc---c----CCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCc
Q 009648          159 ------PAL--GNASVVICCIGASEKE---V----FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP  221 (530)
Q Consensus       159 ------~a~--~~vD~VI~~Ag~~~~~---~----~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~  221 (530)
                            ..+  +.+|+||||||.....   .    .+++..+++|+.++..+++++..+  +.++||++||.+....   
T Consensus        59 ~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~---  135 (235)
T d1ooea_          59 ILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP---  135 (235)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---
T ss_pred             HHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC---
Confidence                  222  4589999999953221   1    123456899999999998888754  3369999999865332   


Q ss_pred             cccccchhHHHHHHHHHHHHHHH---------CCCCEEEEEcCcccCCCcccccccceeecccCcccCCCCCHHHHHHHH
Q 009648          222 AAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL  292 (530)
Q Consensus       222 ~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~~~~~~g~V~v~DVA~ai  292 (530)
                         ...+..|+.+|++++.+.+.         .+++++.|.||++..+.....        ..+..+..++..+|+++.+
T Consensus       136 ---~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~--------~~~~~~~~~~~~~~va~~~  204 (235)
T d1ooea_         136 ---TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW--------MPNADHSSWTPLSFISEHL  204 (235)
T ss_dssp             ---CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH--------STTCCGGGCBCHHHHHHHH
T ss_pred             ---cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhh--------CcCCccccCCCHHHHHHHH
Confidence               23457899999999988763         367899999999976532110        1112234568899999999


Q ss_pred             HHHHhCCC--CCCCcEEEEeCC
Q 009648          293 ACMAKNRS--LSYCKVVEVIAE  312 (530)
Q Consensus       293 ~~ll~~~~--~~~g~vynv~~~  312 (530)
                      +.++..+.  ...|..+.|...
T Consensus       205 ~~~l~~~~~~~~tG~~i~v~~~  226 (235)
T d1ooea_         205 LKWTTETSSRPSSGALLKITTE  226 (235)
T ss_dssp             HHHHHCGGGCCCTTCEEEEEEE
T ss_pred             HHHhcCccccCCCceEEEEEee
Confidence            87765532  245777777544

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.71  E-value=1.9e-16  Score=155.43  Aligned_cols=217  Identities=12%  Similarity=0.110  Sum_probs=141.3

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++++|++|||||+|  +||+++++.|+++|++|++++|++...+.+ +++.+.             .....++.+|+.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~-~~l~~~-------------~~~~~~~~~d~~~~   67 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRV-RPIAQE-------------LNSPYVYELDVSKE   67 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHH-HHHHHH-------------TTCCCEEECCTTCH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHhh-------------CCceeEeeecccch
Confidence            36789999999887  799999999999999999999996433333 223222             14567789999998


Q ss_pred             hhHHHHh-------CCCcEEEEcccCCCCccC------CCCcchHhH----HHHHHHHHHHHHhc-CCC-EEEEEcCCCc
Q 009648          155 VQIEPAL-------GNASVVICCIGASEKEVF------DITGPYRID----FQATKNLVDAATIA-KVN-HFIMVSSLGT  215 (530)
Q Consensus       155 ~sl~~a~-------~~vD~VI~~Ag~~~~~~~------~~~~~~~vN----v~gt~~Ll~aa~~~-gv~-r~V~iSS~~v  215 (530)
                      +++.+++       +.+|++|||+|.......      +....+..+    ......++..+.+. +.+ .++.+|+.+.
T Consensus        68 ~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~  147 (274)
T d2pd4a1          68 EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS  147 (274)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred             hhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccc
Confidence            7766665       578999999996432111      111112222    22233333333332 223 4555555544


Q ss_pred             cCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccccccc--eeecccCcccCCCCCHH
Q 009648          216 NKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL  286 (530)
Q Consensus       216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~~~~--~~~~~~~~~~~g~V~v~  286 (530)
                      ...      ......|+.+|.+.+.+.+.       .|++++.|.||++..+.........  ..........+.+...+
T Consensus       148 ~~~------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (274)
T d2pd4a1         148 TKY------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE  221 (274)
T ss_dssp             TSB------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred             ccc------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHH
Confidence            222      22345699999999888763       7999999999999886543211101  00111123344668999


Q ss_pred             HHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          287 QVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       287 DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      |||+++.+++.+. .+..|+++.|.++.
T Consensus       222 dIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         222 EVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            9999999999864 33578999999885

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.68  E-value=1.9e-15  Score=147.06  Aligned_cols=213  Identities=18%  Similarity=0.157  Sum_probs=137.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh-HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH----h
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR----V  155 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~----~  155 (530)
                      .++|||||+++||+++++.|+++|++|++++|+.++ .+.+.+++...            ....+.++..|+.+.    +
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~   69 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA------------RAGSAVLCKGDLSLSSSLLD   69 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH------------STTCEEEEECCCSSSTTHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh------------cCCceEEEecccccchhHHH
Confidence            368999999999999999999999999999998654 44555544433            125667777776542    2


Q ss_pred             hHH-------HHhCCCcEEEEcccCCCCccCC-----------------CCcchHhHHHHHHHHHHHHHh---------c
Q 009648          156 QIE-------PALGNASVVICCIGASEKEVFD-----------------ITGPYRIDFQATKNLVDAATI---------A  202 (530)
Q Consensus       156 sl~-------~a~~~vD~VI~~Ag~~~~~~~~-----------------~~~~~~vNv~gt~~Ll~aa~~---------~  202 (530)
                      .+.       +.++++|++|||||........                 +...+..|..+...+...+..         .
T Consensus        70 ~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (266)
T d1mxha_          70 CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRS  149 (266)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------C
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccccc
Confidence            232       2346799999999964322110                 112233444444444444332         1


Q ss_pred             CCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH-------HCCCCEEEEEcCcccCCCcccccccceeeccc
Q 009648          203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQE  275 (530)
Q Consensus       203 gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tIvRPg~V~Gp~~~~~~~~~~~~~~~  275 (530)
                      ....++.+++......      ...+..|+.+|+..+.+.+       ..|++++.|.||++..+...........  ..
T Consensus       150 ~~~~~~~~~~~~~~~~------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~--~~  221 (266)
T d1mxha_         150 RNLSVVNLCDAMTDLP------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEY--RR  221 (266)
T ss_dssp             CCEEEEEECCGGGGSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHH--HT
T ss_pred             ccccchhhhhcccccc------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHH--Hh
Confidence            2336666776654222      2345679999999998876       3799999999999987643321111111  11


Q ss_pred             CcccCC-CCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          276 DTLFGG-QVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       276 ~~~~~g-~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                      ....+. +...+|||+++++|+.+. .+..|+++.|.++.
T Consensus       222 ~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         222 KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            112222 368999999999999875 34578899998874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.64  E-value=1.7e-15  Score=147.88  Aligned_cols=218  Identities=11%  Similarity=0.054  Sum_probs=139.3

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++++|+||||||+|  +||+++++.|+++|++|++.+|+..+..+.   +.+            ....+...+++|+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~---~~~------------~~~~~~~~~~~dv~~~   67 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQR---ITD------------RLPAKAPLLELDVQNE   67 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHH---HHT------------TSSSCCCEEECCTTCH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHH---HHH------------HcCCceeeEeeecccc
Confidence            46789999999654  699999999999999999999998764331   111            1125677889999998


Q ss_pred             hhHHHHh----------CCCcEEEEcccCCCCccCC-----------CCcchHhHHHHHHHHHHHHHhc-CCCEEEEEcC
Q 009648          155 VQIEPAL----------GNASVVICCIGASEKEVFD-----------ITGPYRIDFQATKNLVDAATIA-KVNHFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~----------~~vD~VI~~Ag~~~~~~~~-----------~~~~~~vNv~gt~~Ll~aa~~~-gv~r~V~iSS  212 (530)
                      +++..++          +.+|++|||+|........           +...+.+|+.....+.+++... +...+|++++
T Consensus        68 ~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  147 (268)
T d2h7ma1          68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  147 (268)
T ss_dssp             HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccc
Confidence            7655443          3479999999964322211           1122445555555555555443 2223444444


Q ss_pred             CCccCCCCccccccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCccccc--------ccceee----c
Q 009648          213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------THNITL----S  273 (530)
Q Consensus       213 ~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~~--------~~~~~~----~  273 (530)
                      .+....      ...+..|+.+|.+.+.+.+.       .|++++.|.||.|.++......        ......    .
T Consensus       148 ~~~~~~------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (268)
T d2h7ma1         148 FDPSRA------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW  221 (268)
T ss_dssp             CCCSSC------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred             cccccc------CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH
Confidence            333222      22345799999999988762       7899999999999764211000        000000    0


Q ss_pred             ccCc-ccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCCCCC
Q 009648          274 QEDT-LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA  315 (530)
Q Consensus       274 ~~~~-~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~~~~  315 (530)
                      .... +...+...+|||+++.+++.+.. +..|+++.|.++.+.
T Consensus       222 ~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         222 DQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             HHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            0111 12235779999999999997643 346888999888643

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.63  E-value=3e-15  Score=148.17  Aligned_cols=230  Identities=10%  Similarity=0.047  Sum_probs=142.4

Q ss_pred             CCCCCEEEEECCCc--HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCe-EEEEec--C
Q 009648           77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECD--L  151 (530)
Q Consensus        77 ~~~~k~VLVTGAtG--~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v-~~v~~D--l  151 (530)
                      .+++|++|||||+|  +||+++++.|+++|++|++.+|+......... ......+....... .....+ ....+|  +
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETS-LRRGKFDQSRVLPD-GSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHH-HHTTTTTGGGBCTT-SSBCCEEEEEEECTTC
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHH-HHHhhhhhhhhhhh-hhhhhhhhhhhhhhhc
Confidence            46789999999987  89999999999999999999997654333221 11111110000000 000111 222222  2


Q ss_pred             C------------------CH-------hhHHHHhCCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHH
Q 009648          152 E------------------KR-------VQIEPALGNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDA  198 (530)
Q Consensus       152 ~------------------d~-------~sl~~a~~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~a  198 (530)
                      .                  +.       +.+.+.++++|++|||||....        +..++...+++|+.+..+++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~  162 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence            1                  11       2233445789999999986321        2223556789999999999998


Q ss_pred             HHhc--CCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCccccccc
Q 009648          199 ATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKETH  268 (530)
Q Consensus       199 a~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~~~~~~~  268 (530)
                      +...  .-++++.+++.+.....     ......|..+|...+.+++        ..|++++.|+||++.++........
T Consensus       163 ~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~  237 (297)
T d1d7oa_         163 FLPIMNPGGASISLTYIASERII-----PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             HGGGEEEEEEEEEEECGGGTSCC-----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             HHHHhhcCCcceeeeehhhcccc-----cccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC
Confidence            8754  22356666665543322     1223469999988776654        3689999999999988754321110


Q ss_pred             --ceeecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcEEEEeCCC
Q 009648          269 --NITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET  313 (530)
Q Consensus       269 --~~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~vynv~~~~  313 (530)
                        ...........+.+...+|||+++++|+.+. .+..|+++.|.++.
T Consensus       238 ~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         238 DTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence              0011111223445678999999999999754 33578899888874

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.60  E-value=3.2e-15  Score=151.19  Aligned_cols=228  Identities=11%  Similarity=0.110  Sum_probs=143.1

Q ss_pred             CCEEEEEC--CCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe--------
Q 009648           80 DNLAFVAG--ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC--------  149 (530)
Q Consensus        80 ~k~VLVTG--AtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~--------  149 (530)
                      +|.+||||  ++.+||+.+++.|+++|++|++..|+........... ..++...................+        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYK-NGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHH-TTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHH-HHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            57899999  5579999999999999999999998876544433211 111111100001111122233333        


Q ss_pred             ------------cCCCHhhHH-------HHhCCCcEEEEcccCCCC--------ccCCCCcchHhHHHHHHHHHHHHHhc
Q 009648          150 ------------DLEKRVQIE-------PALGNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA  202 (530)
Q Consensus       150 ------------Dl~d~~sl~-------~a~~~vD~VI~~Ag~~~~--------~~~~~~~~~~vNv~gt~~Ll~aa~~~  202 (530)
                                  |+.+.++++       +.++++|++|||||....        +..+|...+++|+.+...+++++..+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        444443333       445789999999985422        22235567889999999999988764


Q ss_pred             --CCCEEEEEcCCCccCCCCccccccchhHHHHHHHHHHHHHH--------HCCCCEEEEEcCcccCCCccccc------
Q 009648          203 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKE------  266 (530)
Q Consensus       203 --gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tIvRPg~V~Gp~~~~~~------  266 (530)
                        ..++||.+||.+....-     ......|+.+|..++.+.+        ++||+++.|.||.|.++-.....      
T Consensus       161 m~~~GsIv~iss~~~~~~~-----p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~  235 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVV-----PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTY  235 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCC-----TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------
T ss_pred             cccccccccceeehhcccc-----cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhh
Confidence              33589999987663321     1123458999999997765        25999999999998652100000      


Q ss_pred             ---------------------------ccc------------eeecccCcccCCCCCHHHHHHHHHHHHhCC-CCCCCcE
Q 009648          267 ---------------------------THN------------ITLSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKV  306 (530)
Q Consensus       267 ---------------------------~~~------------~~~~~~~~~~~g~V~v~DVA~ai~~ll~~~-~~~~g~v  306 (530)
                                                 ...            ..........+.+...+|||.++++|+.+. .+..|++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~  315 (329)
T d1uh5a_         236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             ------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence                                       000            000001112345678999999999999764 3457899


Q ss_pred             EEEeCCC
Q 009648          307 VEVIAET  313 (530)
Q Consensus       307 ynv~~~~  313 (530)
                      +.|.++-
T Consensus       316 i~VDGG~  322 (329)
T d1uh5a_         316 IYVDNGL  322 (329)
T ss_dssp             EEESTTG
T ss_pred             EEECCCc
Confidence            9888874

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.60  E-value=2.2e-14  Score=138.72  Aligned_cols=202  Identities=13%  Similarity=0.154  Sum_probs=127.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +|.||||||+++||+++++.|+++|++|++++|+..+                              +..|+.+.+....
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------------~~~d~~~~~~~~~   50 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------------VIADLSTAEGRKQ   50 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------------EECCTTSHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------------HHHHhcCHHHHHH
Confidence            4789999999999999999999999999999997631                              1256766544433


Q ss_pred             Hh--------CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHH----HhcCCCEEEEEcCCCccCCCCccc----
Q 009648          160 AL--------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA----  223 (530)
Q Consensus       160 a~--------~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa----~~~gv~r~V~iSS~~v~~~~~~~~----  223 (530)
                      .+        +.+|++|||||..... ..+.....+|..+...+.+..    .+......+.+++...........    
T Consensus        51 ~~~~~~~~~~~~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (257)
T d1fjha_          51 AIADVLAKCSKGMDGLVLCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL  129 (257)
T ss_dssp             HHHHHHTTCTTCCSEEEECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH
T ss_pred             HHHHHHHHhCCCCcEEEEcCCCCCcH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhh
Confidence            22        4589999999864322 223344567777766665553    344555666666643322111000    


Q ss_pred             ------------------cccchhHHHHHHHHHHHHHHH-------CCCCEEEEEcCcccCCCcccc-cccc--eeeccc
Q 009648          224 ------------------ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHN--ITLSQE  275 (530)
Q Consensus       224 ------------------~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tIvRPg~V~Gp~~~~~-~~~~--~~~~~~  275 (530)
                                        .......|+.+|.+.+.+.+.       .|++++.|.||+|.++..... ....  ..+...
T Consensus       130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~  209 (257)
T d1fjha_         130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF  209 (257)
T ss_dssp             HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred             hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence                              011234699999999988763       799999999999987642211 1111  111111


Q ss_pred             CcccCCCCCHHHHHHHHHHHHhCCC-CCCCcEEEEeCC
Q 009648          276 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE  312 (530)
Q Consensus       276 ~~~~~g~V~v~DVA~ai~~ll~~~~-~~~g~vynv~~~  312 (530)
                      ....+.+...+|||+++++|+.+.. +..|+++.+.++
T Consensus       210 ~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            1234456789999999999997543 357889988877

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.34  E-value=1.4e-12  Score=121.38  Aligned_cols=84  Identities=21%  Similarity=0.194  Sum_probs=75.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..++|+||||||+|+||+.+++.|+++|++|++++|+.++.+.+.+.+...              .++.++.+|+.|.+.
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~d~~~~~~   85 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDAS   85 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHH
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc--------------cchhhhhhhcccHHH
Confidence            467899999999999999999999999999999999999988887766543              356678899999999


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      ++++++++|+||||||..
T Consensus        86 ~~~~~~~iDilin~Ag~g  103 (191)
T d1luaa1          86 RAEAVKGAHFVFTAGAIG  103 (191)
T ss_dssp             HHHHTTTCSEEEECCCTT
T ss_pred             HHHHhcCcCeeeecCccc
Confidence            999999999999999853

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.62  E-value=1.8e-07  Score=80.69  Aligned_cols=95  Identities=18%  Similarity=0.186  Sum_probs=74.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|+|+ |.+|+.|++.|.+.|++|+++++++++.+.+.++                  -++.++.||..|.+.+.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~------------------~~~~vi~Gd~~~~~~l~~~   61 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLEDA   61 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh------------------hhhhhccCcccchhhhhhc
Confidence            68999996 9999999999999999999999999887765431                  2568899999999998877


Q ss_pred             -hCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          161 -LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       161 -~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                       ++.+|+||.+...           .+.|+..+    ..++..+.+++|-
T Consensus        62 ~i~~a~~vv~~t~~-----------d~~N~~~~----~~~k~~~~~~iI~   96 (132)
T d1lssa_          62 GIEDADMYIAVTGK-----------EEVNLMSS----LLAKSYGINKTIA   96 (132)
T ss_dssp             TTTTCSEEEECCSC-----------HHHHHHHH----HHHHHTTCCCEEE
T ss_pred             ChhhhhhhcccCCc-----------HHHHHHHH----HHHHHcCCceEEE
Confidence             5889999987432           14454333    3456677777664

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.59  E-value=3e-07  Score=81.22  Aligned_cols=118  Identities=12%  Similarity=0.115  Sum_probs=81.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      |.++|||.|.|+ |++|..++..|+.+|  .+|+++++++++.+.....+.+..          .......+..+|+   
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~----------~~~~~~~~~~~d~---   67 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----------AFTAPKKIYSGEY---   67 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----------GGSCCCEEEECCG---
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccc----------cccCCceEeeccH---
Confidence            455779999995 999999999999988  699999999987766554444321          1123345555664   


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                          +.++++|+||.+||.......+....++.|....+.+++.+.+.+.+-+|.+-|
T Consensus        68 ----~~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          68 ----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             ----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ----HHhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence                246799999999997665555566778899999999999999987766655543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.50  E-value=1.2e-06  Score=77.46  Aligned_cols=118  Identities=16%  Similarity=0.189  Sum_probs=86.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      +..++||.|+|| |++|..++..|+.+|  .+++++++++++.+.....+.+.         ..+....+.+...|.   
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~---------~~~~~~~~~~~~~d~---   69 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---------KVFAPKPVDIWHGDY---   69 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---------TTSSSSCCEEEECCG---
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC---------ccccCCCeEEEECCH---
Confidence            345678999996 999999999999987  48999999998876655555432         112223455555554   


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEc
Q 009648          155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS  211 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iS  211 (530)
                          +.++++|+||.++|............+..|..-.+.+++.+++++.+ .||.+|
T Consensus        70 ----~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          70 ----DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             ----GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ----HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence                34778999999999876655566677889999999999999888655 444443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.47  E-value=1e-06  Score=77.65  Aligned_cols=117  Identities=16%  Similarity=0.092  Sum_probs=81.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+|.|+||+|.||..++..|+.+|  .++.++++++.  +.+.+...+....         ......+++...--.|   
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~---------~~~~~~~~~~~~~~~d---   68 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---------AGTRSDANIYVESDEN---   68 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---------TTSCCCCEEEEEETTC---
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcc---------cccccCCccccCCcch---
Confidence            579999999999999999999998  59999998763  3444443343321         0111233332221112   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                       .+.++++|+||.+||.......+....++.|....+.+++...+.+-+.++.+
T Consensus        69 -~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          69 -LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             -GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             -HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence             24677999999999976655555566789999999999999988876555544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.40  E-value=1.1e-06  Score=77.38  Aligned_cols=114  Identities=16%  Similarity=0.088  Sum_probs=82.2

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      ||.|+||+|.+|..++..|+.+|  -++++++.+..+...+  .+.           ..........+    ....+..+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~-----------~~~~~~~~~~~----~~~~~~~~   64 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLS-----------HIETRATVKGY----LGPEQLPD   64 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHT-----------TSSSSCEEEEE----ESGGGHHH
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHh-----------hhhhhcCCCeE----EcCCChHH
Confidence            69999999999999999999888  4799999876543332  111           11111111111    23455778


Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      +++++|+||.+||.......+....++.|....+.+++.+.+++.+-+|.+-|
T Consensus        65 ~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          65 CLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             HhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            89999999999997666555667789999999999999999997665555543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.34  E-value=2.5e-06  Score=75.80  Aligned_cols=75  Identities=20%  Similarity=0.336  Sum_probs=61.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .|+|+|.|| |++|+.+++.|.++||+|++++|+.++...+.+.                 .........+..+......
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~-----------------~~~~~~~~~~~~~~~~~~~   63 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-----------------VQHSTPISLDVNDDAALDA   63 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT-----------------CTTEEEEECCTTCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc-----------------ccccccccccccchhhhHh
Confidence            578999986 9999999999999999999999999988876431                 2445556667777777888


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      .+...|.+|.+..
T Consensus        64 ~i~~~~~~i~~~~   76 (182)
T d1e5qa1          64 EVAKHDLVISLIP   76 (182)
T ss_dssp             HHTTSSEEEECSC
T ss_pred             hhhccceeEeecc
Confidence            8899999998754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.28  E-value=1.7e-06  Score=74.26  Aligned_cols=72  Identities=22%  Similarity=0.278  Sum_probs=60.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+++|.|+ |.+|+++++.|.++|++|++++.++++.+.+.+                   ....++.+|.++.+.+.++
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~~a   60 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-------------------YATHAVIANATEENELLSL   60 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-------------------TCSEEEECCTTCTTHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-------------------hCCcceeeecccchhhhcc
Confidence            46888875 999999999999999999999999987766421                   3456778999999998877


Q ss_pred             -hCCCcEEEEccc
Q 009648          161 -LGNASVVICCIG  172 (530)
Q Consensus       161 -~~~vD~VI~~Ag  172 (530)
                       +.++|+||.+.+
T Consensus        61 ~i~~a~~vi~~~~   73 (134)
T d2hmva1          61 GIRNFEYVIVAIG   73 (134)
T ss_dssp             TGGGCSEEEECCC
T ss_pred             CCccccEEEEEcC
Confidence             688999988865

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.24  E-value=9.6e-06  Score=71.85  Aligned_cols=122  Identities=12%  Similarity=0.045  Sum_probs=84.0

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++.+++||.|.|+ |.+|..++..|+..| .++++++.+++++......+.+..-.        .. -..... ++    
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~--------~~-~~~~~~-~~----   67 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV--------VD-TNVSVR-AE----   67 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH--------TT-CCCCEE-EE----
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccc--------cC-CeeEEe-cc----
Confidence            3556789999997 999999998888888 58999999988777665555432100        00 111111 11    


Q ss_pred             hhHHHHhCCCcEEEEcccCCCCcc-----CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          155 VQIEPALGNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~~~~-----~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      .....+++++|+||.++|......     ......+..|....+.+++.+.+.+.+-+|.+-|
T Consensus        68 ~~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          68 YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             CSHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CchhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            224667889999999999654322     1334568889999999999999887665655543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.22  E-value=1.2e-05  Score=71.67  Aligned_cols=117  Identities=15%  Similarity=0.119  Sum_probs=84.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ..+++|.|.|+ |.+|..++..|+.+|.  ++.++++++++.......+.+...         +.........+|+    
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~---------~~~~~~~~~~~d~----   83 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL---------FLQTPKIVADKDY----   83 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG---------GCCCSEEEECSSG----
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc---------ccCCCeEEeccch----
Confidence            34568999996 9999999999999994  899999998877665555543211         1112222233333    


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEE-EEEc
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF-IMVS  211 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~-V~iS  211 (530)
                         +.++++|+||.+||.......+....++.|....+.+++..++.+.+-+ |.+|
T Consensus        84 ---~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          84 ---SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             ---GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ---hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence               2367999999999987666566677888999999999999998866544 4444

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=1.1e-05  Score=71.83  Aligned_cols=115  Identities=14%  Similarity=0.052  Sum_probs=82.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ....+|.|+|+ |.||..++..|+.+|  .++++++++++++......+.+..         ............|+    
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~---------~~~~~~~~~~~~d~----   82 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGS---------LFLSTPKIVFGKDY----   82 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTT---------TTCSCCEEEEESSG----
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcc---------hhcCCCeEEeccch----
Confidence            34458999995 999999999999998  489999999887766555554331         11112233333343    


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                         +.++++|+||.+||.......+....++.|....+.+++.+.+++.+-+|.
T Consensus        83 ---~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivi  133 (159)
T d2ldxa1          83 ---NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKII  133 (159)
T ss_dssp             ---GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEE
T ss_pred             ---hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEE
Confidence               345789999999997666556666778999999999999988876554443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.16  E-value=1e-05  Score=71.08  Aligned_cols=114  Identities=15%  Similarity=0.091  Sum_probs=78.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |+|.|+|+ |.||..++..|+.+|  .+++++++++++.+.....+.+..         ........+...|.       
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~---------~~~~~~~~~~~~d~-------   64 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM---------ANLEAHGNIVINDW-------   64 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG---------GGSSSCCEEEESCG-------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccc---------cccCCccceeccCH-------
Confidence            68999995 999999999999887  589999999887766554444331         01112334444443       


Q ss_pred             HHhCCCcEEEEcccCCCC----ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 PALGNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~----~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +.++++|+||.+||....    ...+-...++.|....+.+++.+.+.+.+-+|.+-
T Consensus        65 ~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            336799999999996431    11223455788999999999999988766555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.16  E-value=1e-05  Score=70.97  Aligned_cols=114  Identities=18%  Similarity=0.163  Sum_probs=77.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHh-CC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLK-LG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~-~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+|.|+|++|.||..++..|+. .+  .++.+++..+ ......-.+.+.           ........+ ..-   ...
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~-----------~~~~~~~~~-~~~---~~~   64 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI-----------PTAVKIKGF-SGE---DAT   64 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTS-----------CSSCEEEEE-CSS---CCH
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCC-----------ccccCCcEE-EcC---CCc
Confidence            6899999999999999988764 34  7899998764 443332222211           111222222 111   222


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCE-EEEEc
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS  211 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r-~V~iS  211 (530)
                       ++++++|+||.+||.......+....+..|....+.+++.+.+.+.+. ||.+|
T Consensus        65 -~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          65 -PALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             -HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             -cccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence             468899999999998766666667789999999999999999886554 44444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.15  E-value=9.7e-06  Score=70.66  Aligned_cols=113  Identities=19%  Similarity=0.125  Sum_probs=81.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |||.|.|+ |.+|..++..|+.+|  .++.++++++++.......+....          .......+..+|.       
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~----------~~~~~~~~~~~~~-------   62 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT----------PFTRRANIYAGDY-------   62 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG----------GGSCCCEEEECCG-------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccc----------cccccccccCCcH-------
Confidence            58999996 999999999998887  589999999887766544443320          1123444544442       


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +.++++|+||.+||............+..|..-.+.+++...+.+.+-+|.+-
T Consensus        63 ~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence            34779999999999766554444566788999999999999988766555543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.11  E-value=9.4e-06  Score=70.80  Aligned_cols=114  Identities=16%  Similarity=0.059  Sum_probs=79.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      |||.|+|| |.+|..++..|+..|  .++.++++++.+.......+.+...         .......+...+  |    .
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~---------~~~~~~~i~~~~--~----~   64 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP---------VGLFDTKVTGSN--D----Y   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH---------HHTCCCEEEEES--C----G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccc---------hhcccceEEecC--C----H
Confidence            57999996 999999999999988  6999999999876655433322110         011233443322  2    2


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                      ++++++|+||.+||........-...++.|..-.+.+++.+.+.+.+-++.+
T Consensus        65 ~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          65 ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            3478999999999976554444456678888889999999988765545444

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.11  E-value=1.6e-05  Score=69.51  Aligned_cols=113  Identities=17%  Similarity=0.104  Sum_probs=80.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .||.|+|+ |++|..++..|+.+|  .+++++++++.+.+.....+++.          ........+...+  +    .
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a----------~~~~~~~~i~~~~--~----~   64 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHG----------SSFYPTVSIDGSD--D----P   64 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHT----------GGGSTTCEEEEES--C----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhc----------cccCCCceeecCC--C----H
Confidence            37999996 999999999999998  48999999988766544444332          0111233443332  1    1


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                      +.++++|+||.+||............++.|..-.+.+++.+++.+.+-++.+
T Consensus        65 ~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          65 EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            2467899999999977665555556788999999999999998876545443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.10  E-value=2.1e-06  Score=76.50  Aligned_cols=47  Identities=23%  Similarity=0.373  Sum_probs=43.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM  127 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~  127 (530)
                      |||.|+||+|.+|++|++.|+++||+|++.+|++++.+.+.+++...
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            67999999999999999999999999999999999999888877644

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.09  E-value=1.4e-05  Score=69.87  Aligned_cols=115  Identities=15%  Similarity=0.076  Sum_probs=81.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCCHhhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~sl  157 (530)
                      |+|.|+|+ |.+|..++..|+.+|  .++.++++++++.+.....+.+..-       .  ......+.. .|+      
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~-------~--~~~~~~i~~~~d~------   64 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-------G--IDKYPKIVGGADY------   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-------T--TTCCCEEEEESCG------
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhcc-------c--cCCCCccccCCCH------
Confidence            68999996 999999999999887  5899999998876665444443210       0  011223332 232      


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                       +.++++|+||..||............+..|..-...+++.+.+.+.+.++.+-|
T Consensus        65 -~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          65 -SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             -GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             -HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence             357899999999997665555556678889999999999999886655555443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.09  E-value=6.9e-06  Score=71.85  Aligned_cols=112  Identities=14%  Similarity=0.110  Sum_probs=72.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.|+|+ |.+|..++..|+.+|  .+++++++++++.......+.+          ............+|.       
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~----------~~~~~~~~~~~~~~~-------   63 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH----------GLPFMGQMSLYAGDY-------   63 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT----------SCCCTTCEEEC--CG-------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeecc----------CcccCCCeeEeeCcH-------
Confidence            46999996 999999999999988  4899999998765544333322          111223444443332       


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEE
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV  210 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~i  210 (530)
                      +.++++|+||.+||............+..|..-.+.+++.+.+.+.+-++.+
T Consensus        64 ~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          64 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            3578999999999976655455556688899999999999998865544433

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.08  E-value=1.8e-05  Score=69.16  Aligned_cols=111  Identities=10%  Similarity=-0.008  Sum_probs=77.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC--eEEEEECC--chhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF--RVRAGVRS--VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~--~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ||.|+||+|.||..++..|+.+|.  ++.+++.+  +++.......+.+..          .......+..+|..     
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~----------~~~~~~~i~~~~~~-----   66 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGI----------AYDSNTRVRQGGYE-----   66 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHH----------TTTCCCEEEECCGG-----
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcc----------cccCCceEeeCCHH-----
Confidence            699999999999999999999983  78888854  333333333333210          01234455555542     


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                        .++++|+||.+||.......+....++.|..-.+.+++...+.+.+-++.
T Consensus        67 --~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~i  116 (142)
T d1o6za1          67 --DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISL  116 (142)
T ss_dssp             --GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEE
T ss_pred             --HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence              35799999999997665555556678899999999999999886554444

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.06  E-value=5.8e-06  Score=73.19  Aligned_cols=118  Identities=14%  Similarity=0.125  Sum_probs=75.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEE--ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAG--VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~--~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      ++.++|.|+||+|+||.+++..|+..+.       ...++  .++..+...+...+...            ....+..+.
T Consensus         2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~   69 (154)
T d1y7ta1           2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC------------AFPLLAGLE   69 (154)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT------------TCTTEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc------------ccccccccc
Confidence            4567999999999999999999987652       11222  22333333322222211            113333333


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcC-CC-EEEEEc
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS  211 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~g-v~-r~V~iS  211 (530)
                      ..    .....+++++|+||.++|.......+....+..|+.-.+.+++.+.+.. -. .|+.+|
T Consensus        70 ~~----~~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          70 AT----DDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             EE----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cC----CchhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence            32    2246788999999999998766555556678889999999999998853 22 454544

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.98  E-value=1.5e-05  Score=69.54  Aligned_cols=114  Identities=15%  Similarity=0.080  Sum_probs=74.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~sl~  158 (530)
                      ++|.|+|+ |.+|..++..|+.++ .++.+++.++++.......+.....         .......+. ..|+       
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~---------~~~~~~~i~~~~d~-------   64 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP---------IEGFDVRVTGTNNY-------   64 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHH---------HHTCCCCEEEESCG-------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhcccc---------ccCCCCEEEecCcH-------
Confidence            58999996 999999999998887 5999999988876655443332100         001122232 2232       


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +.++++|+||.+||............++.|....+.+++...+.+.+-++.+-
T Consensus        65 ~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv  117 (142)
T d1uxja1          65 ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV  117 (142)
T ss_dssp             GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence            23578999999999765544555667889999999999999988766555553

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.90  E-value=5.4e-05  Score=66.57  Aligned_cols=116  Identities=12%  Similarity=0.085  Sum_probs=79.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      +.||.|.|+ |.+|..++..|+.++ .++.++++++++.......+.+...         .......+...|  +    .
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~---------~~~~~~~v~~~~--~----~   66 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNV---------MAYSNCKVSGSN--T----Y   66 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHH---------HHTCCCCEEEEC--C----G
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhcc---------ccCCCcEEEecc--c----c
Confidence            358999995 999999998887777 5899999998877766555544310         001223333222  1    2


Q ss_pred             HHhCCCcEEEEcccCCCCcc-----CCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          159 PALGNASVVICCIGASEKEV-----FDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~-----~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +.++++|+||.++|......     .+....+..|....+.+++.+++.+.+-+|.+-
T Consensus        67 ~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          67 DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            45678999999999654321     123456889999999999999988766555543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.87  E-value=0.0001  Score=64.88  Aligned_cols=116  Identities=13%  Similarity=0.073  Sum_probs=74.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-------eEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-------~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      .++|.|+||+|.||.+++..|+..+.       .+++++.+..  +.+.+...+...          .  ......+.+-
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~----------~--~~~~~~~~~~   70 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC----------A--LPLLKDVIAT   70 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------C--CTTEEEEEEE
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccc----------c--cccccccccC
Confidence            56899999999999999999986541       3455544432  233332222111          0  1222222221


Q ss_pred             CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-CCC-EEEEEc
Q 009648          151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVN-HFIMVS  211 (530)
Q Consensus       151 l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-gv~-r~V~iS  211 (530)
                          ....++++++|+||.++|............++.|..-.+.+++...++ +-. .+|.+|
T Consensus        71 ----~~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          71 ----DKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ----SCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence                124578899999999999876655566677899999999999998775 433 344444

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.86  E-value=1.6e-05  Score=70.72  Aligned_cols=73  Identities=25%  Similarity=0.362  Sum_probs=58.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+++|||+|+ |.+|+.+++.|.+.|. +|+++.|+.++...+.+.+.                  ..+     .+.++
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~------------------~~~-----~~~~~   77 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------------------GEA-----VRFDE   77 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------------------CEE-----CCGGG
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh------------------ccc-----ccchh
Confidence            56789999997 9999999999999997 79999999988887765321                  122     23456


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+.+..+|+||+|.+..
T Consensus        78 ~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          78 LVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             HHHHHHTCSEEEECCSSS
T ss_pred             HHHHhccCCEEEEecCCC
Confidence            888899999999998753

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.81  E-value=2.1e-05  Score=70.91  Aligned_cols=78  Identities=18%  Similarity=0.119  Sum_probs=54.9

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|||+||+|.+|..+++.....|.+|++++|++++.+.+.+    +         |    ....+..-|-...+.+
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~---------G----a~~vi~~~~~~~~~~~   90 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I---------G----FDAAFNYKTVNSLEEA   90 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T----CSEEEETTSCSCHHHH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h---------h----hhhhcccccccHHHHH
Confidence            457899999999999999999999999999999999887666543    1         1    1111211222223333


Q ss_pred             HHHh--CCCcEEEEccc
Q 009648          158 EPAL--GNASVVICCIG  172 (530)
Q Consensus       158 ~~a~--~~vD~VI~~Ag  172 (530)
                      .+..  +++|+||++.|
T Consensus        91 ~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          91 LKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             HHHHCTTCEEEEEESSC
T ss_pred             HHHhhcCCCceeEEecC
Confidence            3333  56999999987

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.80  E-value=0.00018  Score=64.78  Aligned_cols=118  Identities=12%  Similarity=0.041  Sum_probs=77.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-----C--eEEEEECCch--hHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-----F--RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-----~--~V~~~~R~~~--k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      .+..+|.|+||+|+||..++-.|+..+     .  .+++++....  ++..+.-++...            ....+.-+.
T Consensus        22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~------------a~~~~~~~~   89 (175)
T d7mdha1          22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDS------------LYPLLREVS   89 (175)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT------------TCTTEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccc------------ccccccCcc
Confidence            445589999999999999999998753     1  4555555442  223322222211            012222222


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCC-C-EEEEEc
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVS  211 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv-~-r~V~iS  211 (530)
                      .-    ....++++++|+||-.+|............++.|....+.+++++.+..- . +++.++
T Consensus        90 ~~----~~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          90 IG----IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             EE----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cc----ccchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            11    12567899999999999987766666677889999999999999998632 2 455544

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.75  E-value=3.9e-05  Score=68.43  Aligned_cols=81  Identities=19%  Similarity=0.051  Sum_probs=55.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .|+|.|.|| |.+|..++..|.++||+|++++|++++.+.+.+.....           ...+.............++.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~e   68 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII-----------AEGPGLAGTAHPDLLTSDIGL   68 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE-----------EESSSCCEEECCSEEESCHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCc-----------hhhhhhhhhhhhhhhhhhhHh
Confidence            378999995 99999999999999999999999988776654311000           000112222222211234778


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      +++++|+||.+.-
T Consensus        69 ~~~~aD~iii~v~   81 (184)
T d1bg6a2          69 AVKDADVILIVVP   81 (184)
T ss_dssp             HHTTCSEEEECSC
T ss_pred             HhcCCCEEEEEEc
Confidence            8999999999863

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=3.5e-05  Score=67.57  Aligned_cols=100  Identities=13%  Similarity=0.026  Sum_probs=62.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      |++|.|.||||++|+.+++.|+++.    .+++++.++........                   ...-.....++.+. 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-------------------~~~~~~~~~~~~~~-   60 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-------------------FGGTTGTLQDAFDL-   60 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-------------------GGTCCCBCEETTCH-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-------------------ccCCceeeecccch-
Confidence            4589999999999999999988864    47777776543211100                   00111112233332 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCC
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG  219 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~  219 (530)
                         ..+.++|+||.|++.                ..+..++..+.+.|.+ ++.++..+.++..
T Consensus        61 ---~~~~~~DivF~a~~~----------------~~s~~~~~~~~~~g~~-~~VID~Ss~fR~~  104 (146)
T d1t4ba1          61 ---EALKALDIIVTCQGG----------------DYTNEIYPKLRESGWQ-GYWIDAASSLRMK  104 (146)
T ss_dssp             ---HHHHTCSEEEECSCH----------------HHHHHHHHHHHHTTCC-CEEEECSSTTTTC
T ss_pred             ---hhhhcCcEEEEecCc----------------hHHHHhhHHHHhcCCC-eecccCCcccccC
Confidence               246789999999863                2366777888888864 3345555555543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=4.5e-05  Score=68.14  Aligned_cols=97  Identities=16%  Similarity=0.217  Sum_probs=65.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ-  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s-  156 (530)
                      ..+.+|||+||+|.||...++.+...|++|+++++++++.+.+.+    +         |     --++  .|..+.+. 
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~----~---------G-----a~~v--i~~~~~~~~   86 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----N---------G-----AHEV--FNHREVNYI   86 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T-----CSEE--EETTSTTHH
T ss_pred             CCCCEEEEEeccccccccccccccccCcccccccccccccccccc----c---------C-----cccc--cccccccHH
Confidence            356799999999999999999999999999999998876655432    2         2     1122  36655433 


Q ss_pred             --HHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          157 --IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       157 --l~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                        +.+..  +++|+||++.|..                .....++.++..  ++||.+..
T Consensus        87 ~~i~~~t~~~g~d~v~d~~g~~----------------~~~~~~~~l~~~--G~iv~~G~  128 (174)
T d1yb5a2          87 DKIKKYVGEKGIDIIIEMLANV----------------NLSKDLSLLSHG--GRVIVVGS  128 (174)
T ss_dssp             HHHHHHHCTTCEEEEEESCHHH----------------HHHHHHHHEEEE--EEEEECCC
T ss_pred             HHhhhhhccCCceEEeecccHH----------------HHHHHHhccCCC--CEEEEEec
Confidence              33333  3589999998631                123344444443  48998764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.72  E-value=3.7e-05  Score=68.81  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|||+||+|.||...++.+...|.+|+++++++++.+.+.+    +         |      .+.+ .|..+....
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----l---------G------a~~~-i~~~~~~~~   85 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----L---------G------AEEA-ATYAEVPER   85 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----T---------T------CSEE-EEGGGHHHH
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----c---------c------ccee-eehhhhhhh
Confidence            457799999999999999999999999999999999887766543    2         2      1111 244443333


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      ....+++|+||++.|
T Consensus        86 ~~~~~g~D~v~d~~G  100 (171)
T d1iz0a2          86 AKAWGGLDLVLEVRG  100 (171)
T ss_dssp             HHHTTSEEEEEECSC
T ss_pred             hhccccccccccccc
Confidence            345578999999877

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=7e-05  Score=67.61  Aligned_cols=84  Identities=12%  Similarity=0.075  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++|+|+|+ |+.|+.++..|++.|. +++++.|+.++...+....++++.           .-.......|+.+.+.
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~~~~~~~   83 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE-----------NTDCVVTVTDLADQQA   83 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH-----------HSSCEEEEEETTCHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh-----------hcCcceEeeecccccc
Confidence            46789999995 8899999999999995 899999998877665544333311           1234455689999888


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +...+..+|+|||+...
T Consensus        84 ~~~~~~~~diiIN~Tp~  100 (182)
T d1vi2a1          84 FAEALASADILTNGTKV  100 (182)
T ss_dssp             HHHHHHTCSEEEECSST
T ss_pred             hhhhhcccceeccccCC
Confidence            99999999999999753

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.63  E-value=0.00022  Score=63.04  Aligned_cols=99  Identities=20%  Similarity=0.245  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC--CCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~~  155 (530)
                      ..+.+|+|+| +|.||...+..+...|.+|+++++++++.+.+.+    +         |    .... +..|-  .+..
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~---------g----a~~~-~~~~~~~~~~~   85 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----C---------G----ADVT-LVVDPAKEEES   85 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T---------T----CSEE-EECCTTTSCHH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----c---------C----CcEE-Eeccccccccc
Confidence            3456899997 7899999999999999999999999988765533    1         1    1222 22332  2333


Q ss_pred             hHHHHh-----CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          156 QIEPAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       156 sl~~a~-----~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      .+.+.+     +++|+||.|+|..               ......++.++..  +++++++.
T Consensus        86 ~~~~~~~~~~g~g~D~vid~~g~~---------------~~~~~a~~~~~~~--G~iv~~G~  130 (170)
T d1e3ja2          86 SIIERIRSAIGDLPNVTIDCSGNE---------------KCITIGINITRTG--GTLMLVGM  130 (170)
T ss_dssp             HHHHHHHHHSSSCCSEEEECSCCH---------------HHHHHHHHHSCTT--CEEEECSC
T ss_pred             hhhhhhhcccccCCceeeecCCCh---------------HHHHHHHHHHhcC--CceEEEec
Confidence            333333     4699999998741               1223344444443  48888764

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=5.9e-05  Score=70.67  Aligned_cols=178  Identities=11%  Similarity=0.061  Sum_probs=96.7

Q ss_pred             CCCCEEEEECC----------------CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCC
Q 009648           78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV  141 (530)
Q Consensus        78 ~~~k~VLVTGA----------------tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~  141 (530)
                      +.+++||||+|                ||..|.+|++++.++|++|+++.-...-                      ...
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------------------~~p   61 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL----------------------PTP   61 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------------------CCC
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc----------------------Ccc
Confidence            45677888765                8999999999999999999998865421                      123


Q ss_pred             CCeEEEEecCCC--HhhHHHHhCCCcEEEEcccCCCCccCCCC-----------cchHhHHHHHHHHHHHHHhcCCCEEE
Q 009648          142 EMLELVECDLEK--RVQIEPALGNASVVICCIGASEKEVFDIT-----------GPYRIDFQATKNLVDAATIAKVNHFI  208 (530)
Q Consensus       142 ~~v~~v~~Dl~d--~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~-----------~~~~vNv~gt~~Ll~aa~~~gv~r~V  208 (530)
                      ..+.++...-.+  .+.+.+.+.++|++|++|+..+.......           ..+.+++.-+..+++...+....+.+
T Consensus        62 ~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~  141 (223)
T d1u7za_          62 PFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPY  141 (223)
T ss_dssp             TTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCE
T ss_pred             cccccceehhhHHHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCce
Confidence            466666543211  13345556789999999997644222110           01112222244556666554333323


Q ss_pred             EEcCCCccCCCCccccccchhHHHHHHHHHHHHHHHCCCCEEEEEcCc----ccCCCcccccccceeecccCcccCCCCC
Q 009648          209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG----MERPTDAYKETHNITLSQEDTLFGGQVS  284 (530)
Q Consensus       209 ~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tIvRPg~----V~Gp~~~~~~~~~~~~~~~~~~~~g~V~  284 (530)
                      .|+-. .. .       +....+      +.+-+...|+.+++...-.    .+|..    ......+...+.......+
T Consensus       142 ~VGFa-aE-t-------~~l~~~------A~~Kl~~K~~D~IvAN~v~~~~~~fgsd----~n~v~ii~~~~~~~~~~~s  202 (223)
T d1u7za_         142 VVGFA-AE-T-------NNVEEY------ARQKRIRKNLDLICANDVSQPTQGFNSD----NNALHLFWQDGDKVLPLER  202 (223)
T ss_dssp             EEEEE-EE-S-------SSHHHH------HHHHHHHHTCSEEEEEECSSTTSSTTSS----EEEEEEEETTEEEEEEEEE
T ss_pred             EEEEe-ec-c-------cchhhH------HHHHHHhcCCCEEEeecccCCCCCcCCC----ceEEEEEECCCeEEcCCCC
Confidence            33321 11 0       111112      2233555789999876422    23321    1223333333222223356


Q ss_pred             HHHHHHHHHHHH
Q 009648          285 NLQVAELLACMA  296 (530)
Q Consensus       285 v~DVA~ai~~ll  296 (530)
                      -.++|+.|+..+
T Consensus       203 K~~iA~~Il~~I  214 (223)
T d1u7za_         203 KELLGQLLLDEI  214 (223)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            788999888654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.61  E-value=0.00016  Score=62.98  Aligned_cols=76  Identities=11%  Similarity=0.107  Sum_probs=61.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      .+|+|.|. |-+|+.+++.|.+.|++|++++.++++.....+...               ..++.++.||.+|++.++++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~---------------~~~~~vi~Gd~~d~~~L~~a   67 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---------------GDNADVIPGDSNDSSVLKKA   67 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---------------CTTCEEEESCTTSHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh---------------cCCcEEEEccCcchHHHHHh
Confidence            36999995 899999999999999999999999876554433222               25789999999999988765


Q ss_pred             -hCCCcEEEEccc
Q 009648          161 -LGNASVVICCIG  172 (530)
Q Consensus       161 -~~~vD~VI~~Ag  172 (530)
                       ++.+|+||.+.+
T Consensus        68 ~i~~a~~vi~~~~   80 (153)
T d1id1a_          68 GIDRCRAILALSD   80 (153)
T ss_dssp             TTTTCSEEEECSS
T ss_pred             ccccCCEEEEccc
Confidence             478999999864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.60  E-value=5.2e-05  Score=67.94  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=54.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---  154 (530)
                      ..+.+|||+||+|.||..+++.+...|.+|++++++.++.+.+.+    +         |     --++  .|..+.   
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~----~---------G-----a~~v--i~~~~~~~~   83 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L---------G-----VEYV--GDSRSVDFA   83 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T---------C-----CSEE--EETTCSTHH
T ss_pred             CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc----c---------c-----cccc--ccCCccCHH
Confidence            346799999999999999999998899999999999877665432    1         1     1122  344443   


Q ss_pred             hhHHHHh--CCCcEEEEccc
Q 009648          155 VQIEPAL--GNASVVICCIG  172 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag  172 (530)
                      +.+.+..  +++|+||++.|
T Consensus        84 ~~v~~~t~~~g~d~v~d~~g  103 (183)
T d1pqwa_          84 DEILELTDGYGVDVVLNSLA  103 (183)
T ss_dssp             HHHHHHTTTCCEEEEEECCC
T ss_pred             HHHHHHhCCCCEEEEEeccc
Confidence            3344443  46999999987

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.00049  Score=60.59  Aligned_cols=66  Identities=23%  Similarity=0.269  Sum_probs=51.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      +++|.|.| .|.+|+.+++.|+++||+|++.+|+.++.+.+...             +      ..       ...+..+
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~-------------~------~~-------~~~~~~e   53 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-------------G------AS-------AARSARD   53 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-------------T------CE-------ECSSHHH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh-------------h------cc-------ccchhhh
Confidence            35799998 89999999999999999999999999887765431             1      00       1124667


Q ss_pred             HhCCCcEEEEccc
Q 009648          160 ALGNASVVICCIG  172 (530)
Q Consensus       160 a~~~vD~VI~~Ag  172 (530)
                      ++..+|+||-|..
T Consensus        54 ~~~~~diii~~v~   66 (162)
T d3cuma2          54 AVQGADVVISMLP   66 (162)
T ss_dssp             HHTSCSEEEECCS
T ss_pred             hccccCeeeeccc
Confidence            8889999999864

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.53  E-value=0.00025  Score=62.38  Aligned_cols=65  Identities=17%  Similarity=0.232  Sum_probs=51.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|.| .|.+|+.+++.|+++||+|++.+|+.++.+.+.+                   .+...       ..+..++
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-------------------~~~~~-------~~~~~e~   53 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET-------ASTAKAI   53 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-------------------hhhhh-------cccHHHH
Confidence            5799998 7999999999999999999999999988777643                   11111       1245677


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||-|..
T Consensus        54 ~~~~d~ii~~v~   65 (161)
T d1vpda2          54 AEQCDVIITMLP   65 (161)
T ss_dssp             HHHCSEEEECCS
T ss_pred             HhCCCeEEEEcC
Confidence            788999999964

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.50  E-value=0.0001  Score=65.75  Aligned_cols=76  Identities=20%  Similarity=0.279  Sum_probs=56.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh--
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--  155 (530)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+.+    +         |     --++  .|..+.+  
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~----l---------G-----a~~v--i~~~~~d~~   86 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----A---------G-----AWQV--INYREEDLV   86 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh----c---------C-----CeEE--EECCCCCHH
Confidence            446799999999999999999999999999999999988776543    2         2     1123  3555533  


Q ss_pred             -hHHHHh--CCCcEEEEcccC
Q 009648          156 -QIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       156 -sl~~a~--~~vD~VI~~Ag~  173 (530)
                       .+.++-  +++|+||++.|.
T Consensus        87 ~~v~~~t~g~g~d~v~d~~g~  107 (179)
T d1qora2          87 ERLKEITGGKKVRVVYDSVGR  107 (179)
T ss_dssp             HHHHHHTTTCCEEEEEECSCG
T ss_pred             HHHHHHhCCCCeEEEEeCccH
Confidence             334433  358999999874

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.46  E-value=0.00011  Score=64.10  Aligned_cols=93  Identities=19%  Similarity=0.166  Sum_probs=57.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++|.|.||||++|+.|++.|.+++   .++..+..+...                    |    ..+.+..-|+.-.+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~--------------------G----k~i~~~~~~~~~~~~   57 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA--------------------G----QRMGFAESSLRVGDV   57 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT--------------------T----CEEEETTEEEECEEG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC--------------------C----cceeeccccchhccc
Confidence            4689999999999999999998765   477776654321                    1    112211111111111


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      -...+.++|+||.+++.                ..+..++..+.+.|. ++|-.|+.
T Consensus        58 ~~~~~~~~d~vf~a~p~----------------~~s~~~~~~~~~~g~-~VID~Ss~   97 (144)
T d2hjsa1          58 DSFDFSSVGLAFFAAAA----------------EVSRAHAERARAAGC-SVIDLSGA   97 (144)
T ss_dssp             GGCCGGGCSEEEECSCH----------------HHHHHHHHHHHHTTC-EEEETTCT
T ss_pred             hhhhhccceEEEecCCc----------------chhhhhccccccCCc-eEEeechh
Confidence            12235679999998753                235566666777775 67766664

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00015  Score=64.58  Aligned_cols=73  Identities=18%  Similarity=0.248  Sum_probs=54.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|||.| +|+.+++++..|.+.|.+|+++.|+.++.+.+.+.+...              ..+..+  ++.+.   
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~--------------~~~~~~--~~~~~---   75 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQAL--SMDEL---   75 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEEEC--CSGGG---
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc--------------cccccc--ccccc---
Confidence            5678999999 588999999999999999999999999988877654322              233333  22221   


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                        ....+|+||||..
T Consensus        76 --~~~~~dliIN~Tp   88 (170)
T d1nyta1          76 --EGHEFDLIINATS   88 (170)
T ss_dssp             --TTCCCSEEEECCS
T ss_pred             --cccccceeecccc
Confidence              1356899999974

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.40  E-value=0.00015  Score=66.37  Aligned_cols=40  Identities=20%  Similarity=0.087  Sum_probs=36.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|++|..++..|++.||+|++++.+.++.+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            6799997 999999999999999999999999988777654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.39  E-value=0.00021  Score=62.99  Aligned_cols=39  Identities=21%  Similarity=0.205  Sum_probs=34.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL  120 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l  120 (530)
                      |||.|.| .|.+|..+++.|.+.||+|++++|+.+..+..
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a   39 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA   39 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHH
Confidence            6799998 69999999999999999999999998766654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.39  E-value=0.0019  Score=53.18  Aligned_cols=96  Identities=23%  Similarity=0.277  Sum_probs=68.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|||.| .|.+|.+-++.|++.|.+|++++........  ...               ...+++++..++.+.  
T Consensus         9 ~l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~--~~~---------------~~~~i~~~~~~~~~~--   68 (113)
T d1pjqa1           9 QLRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFT--VWA---------------NEGMLTLVEGPFDET--   68 (113)
T ss_dssp             CCBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHH--HHH---------------TTTSCEEEESSCCGG--
T ss_pred             EeCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHH--HHH---------------hcCCceeeccCCCHH--
Confidence            35678999999 7889999999999999999999876643221  110               125788888777543  


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                         .+.+++.||.+.+.               -.-...+.+.|++.|+  +|++..
T Consensus        69 ---dl~~~~lv~~at~d---------------~~~n~~i~~~a~~~~i--lVNv~D  104 (113)
T d1pjqa1          69 ---LLDSCWLAIAATDD---------------DTVNQRVSDAAESRRI--FCNVVD  104 (113)
T ss_dssp             ---GGTTCSEEEECCSC---------------HHHHHHHHHHHHHTTC--EEEETT
T ss_pred             ---HhCCCcEEeecCCC---------------HHHHHHHHHHHHHcCC--EEEeCC
Confidence               36689999988542               1224567788888876  787654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.37  E-value=0.00013  Score=56.71  Aligned_cols=43  Identities=40%  Similarity=0.448  Sum_probs=38.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      .+++|||+||+|.+|...++.+...|++|+++++++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4678999999999999999998999999999999998887764

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.36  E-value=0.00014  Score=65.44  Aligned_cols=100  Identities=21%  Similarity=0.260  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-hh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~s  156 (530)
                      ..+.+|||.||+|.+|...++.+...|.+|++.++++++.+.+.+    +         |     --+++  |..+. +.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~----l---------G-----a~~vi--~~~~~~~~   89 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV----L---------G-----AKEVL--AREDVMAE   89 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH----T---------T-----CSEEE--ECC-----
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh----c---------c-----cceee--ecchhHHH
Confidence            346689999999999999999999999999999999988776543    1         1     11222  32221 11


Q ss_pred             HHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          157 IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .....  +++|+||++.|...                ....++.++..  +|||.+...+.
T Consensus        90 ~~~~~~~~gvD~vid~vgg~~----------------~~~~l~~l~~~--Griv~~G~~~g  132 (176)
T d1xa0a2          90 RIRPLDKQRWAAAVDPVGGRT----------------LATVLSRMRYG--GAVAVSGLTGG  132 (176)
T ss_dssp             ----CCSCCEEEEEECSTTTT----------------HHHHHHTEEEE--EEEEECSCCSS
T ss_pred             HHHHhhccCcCEEEEcCCchh----------------HHHHHHHhCCC--ceEEEeecccC
Confidence            22233  47999999987421                12233333332  48998887654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.35  E-value=0.00032  Score=62.62  Aligned_cols=74  Identities=16%  Similarity=0.245  Sum_probs=57.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|+|.| +|+.|+.++..|.+.+.+|+++.|+.++.+.+.+.+...              ..+..+..|-.     
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--------------~~~~~~~~~~~-----   75 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQAVSMDSI-----   75 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEEEEGGGC-----
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--------------cccchhhhccc-----
Confidence            4678999999 577899999999998899999999999988887765432              34555554422     


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                        .+..+|+||||...
T Consensus        76 --~~~~~diiIN~tp~   89 (171)
T d1p77a1          76 --PLQTYDLVINATSA   89 (171)
T ss_dssp             --CCSCCSEEEECCCC
T ss_pred             --cccccceeeecccc
Confidence              24679999999764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.0012  Score=58.15  Aligned_cols=77  Identities=23%  Similarity=0.278  Sum_probs=54.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+.+|+|.|+ |.||...+..+...|. +|+++++++.+.+...+    +         |     --+++..+-.+...
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~----~---------G-----a~~~~~~~~~~~~~   85 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----I---------G-----ADLVLQISKESPQE   85 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T---------T-----CSEEEECSSCCHHH
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH----h---------C-----Cccccccccccccc
Confidence            34568999986 9999999999999998 89999999987775432    1         1     11333334445444


Q ss_pred             HHHHh-----CCCcEEEEcccC
Q 009648          157 IEPAL-----GNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~-----~~vD~VI~~Ag~  173 (530)
                      ..+.+     .++|+||.|.|.
T Consensus        86 ~~~~~~~~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          86 IARKVEGQLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHHHHHTSCCSEEEECSCC
T ss_pred             ccccccccCCCCceEEEeccCC
Confidence            44433     468999999884

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.30  E-value=0.00033  Score=61.93  Aligned_cols=75  Identities=17%  Similarity=0.195  Sum_probs=57.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+|+|.|+ |.||...++.+...|++|++++++.++.+.+.+    +         |     .-.+  .|..+.+..
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~----l---------G-----ad~~--i~~~~~~~~   87 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----L---------G-----ADEV--VNSRNADEM   87 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------T-----CSEE--EETTCHHHH
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc----c---------C-----CcEE--EECchhhHH
Confidence            45779999986 889999999888899999999999887654432    2         1     1122  467777767


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      ....+++|+||.+.|.
T Consensus        88 ~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          88 AAHLKSFDFILNTVAA  103 (168)
T ss_dssp             HTTTTCEEEEEECCSS
T ss_pred             HHhcCCCceeeeeeec
Confidence            7777899999999874

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.25  E-value=0.0012  Score=58.71  Aligned_cols=73  Identities=14%  Similarity=0.174  Sum_probs=55.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      .+|.|.| -|.+|..+++.|+++||+|++.+|++++.+.+.+.             +... ...    .-....+++..+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-------------~~~~-~~~----~~a~~~~~~~~~   63 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-------------EAKG-TKV----LGAHSLEEMVSK   63 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-------------TTTT-SSC----EECSSHHHHHHH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh-------------cccc-ccc----cchhhhhhhhhh
Confidence            4699999 79999999999999999999999999998877541             1100 011    113356678888


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      +..+|.+|-+.-
T Consensus        64 ~~~~~~ii~~~~   75 (176)
T d2pgda2          64 LKKPRRIILLVK   75 (176)
T ss_dssp             BCSSCEEEECSC
T ss_pred             hcccceEEEecC
Confidence            899999998864

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.00052  Score=62.42  Aligned_cols=46  Identities=13%  Similarity=0.111  Sum_probs=39.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ  126 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~  126 (530)
                      -++|.|.|| |.+|+.++..++.+|++|++++++++.++...+.+++
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            468999996 9999999999999999999999999877766665543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.00025  Score=62.81  Aligned_cols=76  Identities=16%  Similarity=0.177  Sum_probs=54.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC-CHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~s  156 (530)
                      ..+.+|+|+|+ |.||...+..+...|.+|+++++++++.+...+    +         |    .. +++  |.. +.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~----l---------G----a~-~~i--~~~~~~~~   84 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----M---------G----AD-HYI--ATLEEGDW   84 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T----CS-EEE--EGGGTSCH
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc----c---------C----Cc-EEe--eccchHHH
Confidence            45678999996 999999998888889999999999988776532    2         2    11 222  222 2233


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      .+...+++|+||.|.+..
T Consensus        85 ~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          85 GEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             HHHSCSCEEEEEECCSCS
T ss_pred             HHhhhcccceEEEEecCC
Confidence            445567899999998753

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.18  E-value=0.00048  Score=62.10  Aligned_cols=48  Identities=23%  Similarity=0.296  Sum_probs=39.6

Q ss_pred             CCEEEE-ECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHh
Q 009648           80 DNLAFV-AGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM  127 (530)
Q Consensus        80 ~k~VLV-TGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~  127 (530)
                      +.+|+| .||+|.+|...++.....|.+|++++|+.++.++..+.++++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l   77 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL   77 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc
Confidence            455666 599999999999988888999999999988777766666655

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.18  E-value=0.0011  Score=59.73  Aligned_cols=45  Identities=18%  Similarity=0.083  Sum_probs=38.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK  125 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~  125 (530)
                      -++|.|.|| |.+|+.++..++..|++|++++++++.++...+.+.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            467999996 999999999999999999999999987766655544

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=0.00021  Score=62.43  Aligned_cols=36  Identities=28%  Similarity=0.265  Sum_probs=33.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA  117 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~  117 (530)
                      |||+|+|+ |.+|..++..|.+.||+|++++|+..+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            68999997 9999999999999999999999988643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.13  E-value=0.00099  Score=59.40  Aligned_cols=42  Identities=24%  Similarity=0.140  Sum_probs=36.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||+|+ |.||...+..+...|. +|+++++++++.+.+
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a   69 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA   69 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence            34679999996 8999999999999997 899999999887654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.12  E-value=0.0001  Score=65.76  Aligned_cols=43  Identities=37%  Similarity=0.443  Sum_probs=38.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      +.+|||+||+|.+|...++.....|++|++++|+++|.+.+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~   66 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ   66 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence            4469999999999999998888889999999999988877643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.09  E-value=0.00073  Score=58.66  Aligned_cols=65  Identities=15%  Similarity=0.093  Sum_probs=48.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |||.|.| .|.+|+.+++.|+++||+|++.+|+..+...+...  ..               ++    .     ++..++
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--~~---------------~~----~-----~~~~e~   53 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR--TV---------------GV----T-----ETSEED   53 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH--HH---------------TC----E-----ECCHHH
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh--cc---------------cc----c-----ccHHHH
Confidence            5799998 79999999999999999999999887665443321  00               11    1     124567


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++.+|+||-|.-
T Consensus        54 ~~~~diIi~~v~   65 (152)
T d1i36a2          54 VYSCPVVISAVT   65 (152)
T ss_dssp             HHTSSEEEECSC
T ss_pred             HhhcCeEEEEec
Confidence            889999999964

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.05  E-value=0.00068  Score=58.69  Aligned_cols=40  Identities=23%  Similarity=0.240  Sum_probs=35.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR  116 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k  116 (530)
                      +...++|.|.||.|.+|+.+++.|.++||+|++.+|+...
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            3456789999999999999999999999999999987643

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.04  E-value=0.00078  Score=58.68  Aligned_cols=94  Identities=18%  Similarity=0.058  Sum_probs=56.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      |+|.|.||||++|+.|++.|+++.    .++..+..+...-..                  ........ ...+..+   
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~------------------~~~~~~~~-~~~~~~~---   58 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA------------------PNFGKDAG-MLHDAFD---   58 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC------------------CCSSSCCC-BCEETTC---
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc------------------cccCCcce-eeecccc---
Confidence            589999999999999999998753    466655544321000                  00001111 1112223   


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC-EEEEEcCC
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSL  213 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~-r~V~iSS~  213 (530)
                       ...++++|+||.|...                ..+..++..+.+.|.+ .+|=.|+.
T Consensus        59 -~~~~~~~DvvF~alp~----------------~~s~~~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          59 -IESLKQLDAVITCQGG----------------SYTEKVYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             -HHHHTTCSEEEECSCH----------------HHHHHHHHHHHHTTCCSEEEESSST
T ss_pred             -hhhhccccEEEEecCc----------------hHHHHHhHHHHHcCCceEEEeCCcc
Confidence             2446889999999863                2366777888888875 34445543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.04  E-value=0.00048  Score=62.50  Aligned_cols=82  Identities=20%  Similarity=0.174  Sum_probs=57.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhh-hhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ++.+++|.|.| +|-.|.+++..|.+.||+|++.+|+++..+.+........ ++      +..-..++.+.       .
T Consensus         4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~------~~~l~~~i~~t-------~   69 (189)
T d1n1ea2           4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLK------GVQLASNITFT-------S   69 (189)
T ss_dssp             CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTST------TCBCCTTEEEE-------S
T ss_pred             cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccc------ccccccccccc-------h
Confidence            34456899999 7889999999999999999999999988777654321110 11      11112333322       3


Q ss_pred             hHHHHhCCCcEEEEccc
Q 009648          156 QIEPALGNASVVICCIG  172 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag  172 (530)
                      ++.++++++|+||.+.-
T Consensus        70 ~l~~a~~~ad~iiiavP   86 (189)
T d1n1ea2          70 DVEKAYNGAEIILFVIP   86 (189)
T ss_dssp             CHHHHHTTCSCEEECSC
T ss_pred             hhhhccCCCCEEEEcCc
Confidence            47888999999999863

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00024  Score=63.86  Aligned_cols=42  Identities=40%  Similarity=0.452  Sum_probs=37.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      +.+|||+||+|.+|...++.....|++|++++|++++.+.+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            458999999999999999999999999999999999876654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.97  E-value=0.00083  Score=60.16  Aligned_cols=80  Identities=23%  Similarity=0.264  Sum_probs=51.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|.| +|..|..|+..|.++|++|++..|..+.  +..+.+...+         ....-...+...++.-.+++.++
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~---------~~~~~~~~~~~~~i~~~~~~~~~   68 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGR---------EHPRLGVKLNGVEIFWPEQLEKC   68 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTC---------CBTTTTBCCCSEEEECGGGHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhh---------hhhhhcchhccccccccccHHHH
Confidence            6899999 6999999999999999999999986442  1112222110         00001111111222334668899


Q ss_pred             hCCCcEEEEccc
Q 009648          161 LGNASVVICCIG  172 (530)
Q Consensus       161 ~~~vD~VI~~Ag  172 (530)
                      ++++|+||.+.-
T Consensus        69 ~~~ad~Ii~avp   80 (180)
T d1txga2          69 LENAEVVLLGVS   80 (180)
T ss_dssp             HTTCSEEEECSC
T ss_pred             Hhccchhhcccc
Confidence            999999999864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.97  E-value=0.0048  Score=54.47  Aligned_cols=42  Identities=21%  Similarity=0.333  Sum_probs=38.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS  123 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~  123 (530)
                      |+|.|.| .|.+|..+++.|++.||+|++.+|+.++.+.+.+.
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            5799998 99999999999999999999999999998887653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.96  E-value=0.00063  Score=59.33  Aligned_cols=65  Identities=17%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|.|.| +|.+|++|++.|++.|++|++..|+.++...+.+.+            |      +.+       ..+.+++
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------------g------~~~-------~~~~~~~   54 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------------A------LPY-------AMSHQDL   54 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------------T------CCB-------CSSHHHH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------------c------eee-------echhhhh
Confidence            5799998 999999999999999999999999988877765422            1      111       1235677


Q ss_pred             hCCCcEEEEcc
Q 009648          161 LGNASVVICCI  171 (530)
Q Consensus       161 ~~~vD~VI~~A  171 (530)
                      ++++|+||-|.
T Consensus        55 ~~~~dvIilav   65 (152)
T d2ahra2          55 IDQVDLVILGI   65 (152)
T ss_dssp             HHTCSEEEECS
T ss_pred             hhccceeeeec
Confidence            78999999885

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0011  Score=52.64  Aligned_cols=90  Identities=18%  Similarity=0.161  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+|+|.|. |..|..+++.|.++|++|++.+.+......  +                .....+.+..+.+ +    
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~----------------~~~~~~~~~~~~~-~----   58 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--D----------------KLPEAVERHTGSL-N----   58 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--G----------------GSCTTSCEEESBC-C----
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--H----------------HHhhccceeeccc-c----
Confidence            56789999996 889999999999999999999986542111  0                0012334444443 2    


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEE
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V  208 (530)
                      ...+.++|.||..-|....                ..+++.|+++|+ .+|
T Consensus        59 ~~~~~~~d~vi~SPGi~~~----------------~~~~~~a~~~gi-~ii   92 (93)
T d2jfga1          59 DEWLMAADLIVASPGIALA----------------HPSLSAAADAGI-EIV   92 (93)
T ss_dssp             HHHHHHCSEEEECTTSCTT----------------SHHHHHHHHTTC-EEE
T ss_pred             hhhhccCCEEEECCCCCCC----------------CHHHHHHHHcCC-CeE
Confidence            2335678999999886422                247777888887 443

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.88  E-value=0.0023  Score=56.19  Aligned_cols=78  Identities=14%  Similarity=0.139  Sum_probs=53.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-h
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~  155 (530)
                      ..+.+|+|+|++|.+|..++..+...| .+|+++++++.+.+.+.+    +         |     --+++..+-.|. +
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~---------G-----a~~~i~~~~~~~~~   87 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A---------G-----ADYVINASMQDPLA   87 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H---------T-----CSEEEETTTSCHHH
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----c---------C-----CceeeccCCcCHHH
Confidence            346789999999999999999999888 599999999877665532    2         1     113333332232 2


Q ss_pred             hHHHHh--CCCcEEEEcccC
Q 009648          156 QIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       156 sl~~a~--~~vD~VI~~Ag~  173 (530)
                      .+.+..  +++|+||.|+|.
T Consensus        88 ~~~~~~~~~~~d~vid~~g~  107 (170)
T d1jvba2          88 EIRRITESKGVDAVIDLNNS  107 (170)
T ss_dssp             HHHHHTTTSCEEEEEESCCC
T ss_pred             HHHHHhhcccchhhhccccc
Confidence            233332  458999999874

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.86  E-value=0.0018  Score=57.41  Aligned_cols=104  Identities=20%  Similarity=0.242  Sum_probs=74.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..-+|+|.| .|-.|..-++.+...|.+|++++++.++++.+...+.                ..++..   ..+.+.+.
T Consensus        31 ~pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~----------------~~~~~~---~~~~~~l~   90 (168)
T d1pjca1          31 KPGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEIE   90 (168)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHHH
T ss_pred             CCcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc----------------ccceee---hhhhhhHH
Confidence            346899999 7999999999999999999999999998887765332                233333   34667789


Q ss_pred             HHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                      +.+..+|+||.++-........         .-++.+++.|+...+  ||=++..
T Consensus        91 ~~~~~aDivI~aalipG~~aP~---------lIt~~mv~~Mk~GSV--IVDvaid  134 (168)
T d1pjca1          91 TAVAEADLLIGAVLVPGRRAPI---------LVPASLVEQMRTGSV--IVDVAVD  134 (168)
T ss_dssp             HHHHTCSEEEECCCCTTSSCCC---------CBCHHHHTTSCTTCE--EEETTCT
T ss_pred             HhhccCcEEEEeeecCCcccCe---------eecHHHHhhcCCCcE--EEEeecC
Confidence            9999999999998643322111         125666666665433  6666654

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.84  E-value=0.00091  Score=59.87  Aligned_cols=32  Identities=19%  Similarity=0.207  Sum_probs=27.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEE
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV  111 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~  111 (530)
                      |++|.|.||||++|..|++.|..+ .++|..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            468999999999999999999998 56776554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.84  E-value=0.0035  Score=55.30  Aligned_cols=78  Identities=19%  Similarity=0.208  Sum_probs=52.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEE-EecCCC-
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEK-  153 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d-  153 (530)
                      ...+.+|+|.|+ |++|...+..+...| .+|+++++++++.+...+    +         |     ..+.+ ..|..+ 
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~---------G-----a~~~i~~~~~~~~   86 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----V---------G-----ATECVNPQDYKKP   86 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T---------T-----CSEEECGGGCSSC
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----h---------C-----CeeEEecCCchhH
Confidence            355779999998 668999999999988 699999999988776543    1         1     12222 123222 


Q ss_pred             HhhHHHHh--CCCcEEEEcccC
Q 009648          154 RVQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       154 ~~sl~~a~--~~vD~VI~~Ag~  173 (530)
                      .....+..  +++|+||.+.|.
T Consensus        87 ~~~~~~~~~~~G~D~vid~~G~  108 (176)
T d2jhfa2          87 IQEVLTEMSNGGVDFSFEVIGR  108 (176)
T ss_dssp             HHHHHHHHTTSCBSEEEECSCC
T ss_pred             HHHHHHHHhcCCCCEEEecCCc
Confidence            12222222  579999999885

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.82  E-value=0.0013  Score=55.26  Aligned_cols=70  Identities=19%  Similarity=0.199  Sum_probs=56.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      |+|+|.| -|-+|+.+++.|  +|++|++++.++++.+.+..                   .++.++.||.++++.++++
T Consensus         1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-------------------~~~~~i~Gd~~~~~~L~~a   58 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLR-------------------SGANFVHGDPTRVSDLEKA   58 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-------------------TTCEEEESCTTSHHHHHHT
T ss_pred             CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-------------------cCccccccccCCHHHHHHh
Confidence            4688998 588999999998  57788999999887665432                   4689999999999988765


Q ss_pred             -hCCCcEEEEccc
Q 009648          161 -LGNASVVICCIG  172 (530)
Q Consensus       161 -~~~vD~VI~~Ag  172 (530)
                       ++.++.||.+..
T Consensus        59 ~i~~A~~vi~~~~   71 (129)
T d2fy8a1          59 NVRGARAVIVNLE   71 (129)
T ss_dssp             TCTTCSEEEECCS
T ss_pred             hhhcCcEEEEecc
Confidence             478999998753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.77  E-value=0.0012  Score=58.44  Aligned_cols=43  Identities=21%  Similarity=0.399  Sum_probs=37.6

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~  122 (530)
                      .+++|||+|+ |+.|++++..|.+.|. +|.++.|+.++.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAA   59 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHH
Confidence            4578999995 8899999999999995 89999999998887754

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=96.65  E-value=0.001  Score=58.17  Aligned_cols=24  Identities=33%  Similarity=0.483  Sum_probs=22.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF  105 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~  105 (530)
                      +|.|.||||++|..|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988864

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0026  Score=52.59  Aligned_cols=68  Identities=13%  Similarity=0.150  Sum_probs=53.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ...||.|.| +|.+|+-|+.+..+.|++|++++.+++.-...                     -.-+++.+|+.|.+.+.
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---------------------va~~~i~~~~~d~~~l~   67 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---------------------VAHRSHVINMLDGDALR   67 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---------------------GSSEEEECCTTCHHHHH
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---------------------cCCeEEECCCCCHHHHH
Confidence            446899999 89999999999999999999999887532210                     11267789999999988


Q ss_pred             HHhC--CCcEEE
Q 009648          159 PALG--NASVVI  168 (530)
Q Consensus       159 ~a~~--~vD~VI  168 (530)
                      ++..  ++|+|.
T Consensus        68 ~~~~~~~~DviT   79 (111)
T d1kjqa2          68 RVVELEKPHYIV   79 (111)
T ss_dssp             HHHHHHCCSEEE
T ss_pred             HHHHhhCCceEE
Confidence            8774  579884

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.61  E-value=0.0021  Score=57.62  Aligned_cols=74  Identities=22%  Similarity=0.237  Sum_probs=48.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCe-EEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH---h
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~-V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---~  155 (530)
                      +.+|||+||+|.||...++.+...|.+ |++++++.++...+...+            |     --.+  .|..+.   +
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~------------g-----ad~v--i~~~~~~~~~   91 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL------------G-----FDAA--VNYKTGNVAE   91 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS------------C-----CSEE--EETTSSCHHH
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc------------c-----ceEE--eeccchhHHH
Confidence            368999999999999999998889975 445566666655543211            1     1123  344432   2


Q ss_pred             hHHHHh-CCCcEEEEccc
Q 009648          156 QIEPAL-GNASVVICCIG  172 (530)
Q Consensus       156 sl~~a~-~~vD~VI~~Ag  172 (530)
                      .++++. +++|+||.+.|
T Consensus        92 ~~~~~~~~GvDvv~D~vG  109 (187)
T d1vj1a2          92 QLREACPGGVDVYFDNVG  109 (187)
T ss_dssp             HHHHHCTTCEEEEEESSC
T ss_pred             HHHHHhccCceEEEecCC
Confidence            233333 47999999987

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.52  E-value=0.0058  Score=54.15  Aligned_cols=77  Identities=17%  Similarity=0.157  Sum_probs=51.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC--H
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--R  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~  154 (530)
                      ..+.+|+|+| +|.||...+..+...|. .|++.++++++.+...+    +         |     -.+++...-.|  .
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~----~---------G-----a~~~i~~~~~~~~~   87 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----L---------G-----ATDCLNPRELDKPV   87 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T---------T-----CSEEECGGGCSSCH
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH----h---------C-----CCcccCCccchhhh
Confidence            4567899998 59999999999999997 68888888887654332    1         1     12233221112  1


Q ss_pred             hhHHHHh--CCCcEEEEcccC
Q 009648          155 VQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag~  173 (530)
                      ..+.+..  +++|+||.|.|.
T Consensus        88 ~~~~~~~~~~G~d~vie~~G~  108 (174)
T d1e3ia2          88 QDVITELTAGGVDYSLDCAGT  108 (174)
T ss_dssp             HHHHHHHHTSCBSEEEESSCC
T ss_pred             hhhHhhhhcCCCcEEEEeccc
Confidence            2222222  679999999984

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.51  E-value=0.005  Score=53.61  Aligned_cols=43  Identities=19%  Similarity=0.190  Sum_probs=36.8

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      ..+.+|+|.|+ |.||...+..+...|++|+++++++.+.+...
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~   68 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR   68 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence            45678999986 99999999988889999999999998876543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.50  E-value=0.0057  Score=55.29  Aligned_cols=76  Identities=22%  Similarity=0.187  Sum_probs=51.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-  154 (530)
                      ...+.+|||+|+ |.||...+..+...|. +|+++++++++++...+    +               +...+ .|-.+. 
T Consensus        23 v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~---------------Ga~~~-~~~~~~~   81 (195)
T d1kola2          23 VGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----Q---------------GFEIA-DLSLDTP   81 (195)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T---------------TCEEE-ETTSSSC
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----c---------------cccEE-EeCCCcC
Confidence            355779999985 8999888888777775 88889998887765432    1               22333 233222 


Q ss_pred             --hhHHHHh--CCCcEEEEcccC
Q 009648          155 --VQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       155 --~sl~~a~--~~vD~VI~~Ag~  173 (530)
                        +.+.++.  .++|++|.+.|.
T Consensus        82 ~~~~i~~~t~g~g~D~vid~vG~  104 (195)
T d1kola2          82 LHEQIAALLGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HHHHHHHHHSSSCEEEEEECCCT
T ss_pred             HHHHHHHHhCCCCcEEEEECccc
Confidence              2344444  368999999984

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.49  E-value=0.0008  Score=60.03  Aligned_cols=47  Identities=23%  Similarity=0.323  Sum_probs=40.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ  126 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~  126 (530)
                      .++++|||.| +|+.++.++..|.+.| +|+++.|+.++.+.+.+.+..
T Consensus        16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            5678999999 6779999999997777 999999999999988877654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.45  E-value=0.0062  Score=53.11  Aligned_cols=41  Identities=17%  Similarity=0.272  Sum_probs=34.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEECCchhHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLV  121 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~--~V~~~~R~~~k~~~l~  121 (530)
                      +++|+|.| .|.+|..+++.|.+.|+  +|++++|+.+..+.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~   43 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV   43 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence            35799998 69999999999999995  7888999987766544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.42  E-value=0.0044  Score=54.91  Aligned_cols=75  Identities=17%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC---
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---  153 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---  153 (530)
                      ..+.+|+|.|+ |.||...++.+...|+ +|+++++++.+.+...+    +         |     -.+++  |..+   
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~----l---------G-----a~~~i--~~~~~~~   84 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF----Y---------G-----ATDIL--NYKNGHI   84 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH----H---------T-----CSEEE--CGGGSCH
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh----h---------C-----ccccc--cccchhH
Confidence            34668999985 9999999999988996 79999999887665432    2         1     11232  3333   


Q ss_pred             HhhHHHHh--CCCcEEEEcccC
Q 009648          154 RVQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       154 ~~sl~~a~--~~vD~VI~~Ag~  173 (530)
                      .+.+.+..  +++|+||.|+|.
T Consensus        85 ~~~v~~~t~g~G~D~vid~~g~  106 (174)
T d1jqba2          85 EDQVMKLTNGKGVDRVIMAGGG  106 (174)
T ss_dssp             HHHHHHHTTTSCEEEEEECSSC
T ss_pred             HHHHHHHhhccCcceEEEccCC
Confidence            23344444  359999999985

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.38  E-value=0.001  Score=59.85  Aligned_cols=36  Identities=28%  Similarity=0.380  Sum_probs=29.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS  113 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~  113 (530)
                      .++.||.|.||||++|..|++.|.++- +++..+.-+
T Consensus         3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~   39 (183)
T d2cvoa1           3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD   39 (183)
T ss_dssp             SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred             CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence            456789999999999999999999884 577766543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.37  E-value=0.01  Score=52.31  Aligned_cols=43  Identities=16%  Similarity=0.134  Sum_probs=36.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLV  121 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~  121 (530)
                      ..+.+|+|.|+ |.||...+..+...|. +|+++++++++++...
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~   69 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI   69 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH
Confidence            45678999995 9999999999999995 7899999998877653

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.37  E-value=0.0066  Score=53.77  Aligned_cols=115  Identities=13%  Similarity=0.073  Sum_probs=70.2

Q ss_pred             CCEEEEECCCcHHHHH--HHHHHHhC----CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           80 DNLAFVAGATGKVGSR--TVRELLKL----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~--Lv~~Ll~~----G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      +|||.|.|| |.+|..  ++..|+..    +.+++++++++++++.....+++..-.         .....++...    
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~---------~~~~~~i~~~----   67 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE---------VGADLKFEKT----   67 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH---------TTCCCEEEEE----
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHh---------cCCCeEEEEe----
Confidence            468999996 878864  44555543    469999999998877655444433110         1123333322    


Q ss_pred             HhhHHHHhCCCcEEEEcccCCCCcc-------------------C--CC-----CcchHhHHHHHHHHHHHHHhcCCCEE
Q 009648          154 RVQIEPALGNASVVICCIGASEKEV-------------------F--DI-----TGPYRIDFQATKNLVDAATIAKVNHF  207 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~~~~~~-------------------~--~~-----~~~~~vNv~gt~~Ll~aa~~~gv~r~  207 (530)
                       .+..+++.++|+||++++......                   .  +.     .....-|+...+.+++..++...+-+
T Consensus        68 -td~~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~  146 (171)
T d1obba1          68 -MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAW  146 (171)
T ss_dssp             -SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             -CChhhcccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeE
Confidence             236778999999999987532110                   0  00     01123477888889999888765544


Q ss_pred             EE
Q 009648          208 IM  209 (530)
Q Consensus       208 V~  209 (530)
                      ++
T Consensus       147 ~i  148 (171)
T d1obba1         147 YL  148 (171)
T ss_dssp             EE
T ss_pred             EE
Confidence            33

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.37  E-value=0.0079  Score=52.96  Aligned_cols=75  Identities=19%  Similarity=0.174  Sum_probs=49.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeE-EEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRV-RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V-~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-  155 (530)
                      ..+.+|+|.|+ |.||...+..+...|.++ +++++++.+.+.+.+    +         |     -.+++  |..+.+ 
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~----~---------G-----a~~~i--~~~~~~~   85 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----L---------G-----ATHVI--NSKTQDP   85 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----H---------T-----CSEEE--ETTTSCH
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH----c---------C-----CeEEE--eCCCcCH
Confidence            34678999997 999999999888888754 556777766665432    2         1     12343  443322 


Q ss_pred             --hHHHHh-CCCcEEEEcccC
Q 009648          156 --QIEPAL-GNASVVICCIGA  173 (530)
Q Consensus       156 --sl~~a~-~~vD~VI~~Ag~  173 (530)
                        .+.++. +++|+||.|.|.
T Consensus        86 ~~~i~~~t~gg~D~vid~~G~  106 (174)
T d1f8fa2          86 VAAIKEITDGGVNFALESTGS  106 (174)
T ss_dssp             HHHHHHHTTSCEEEEEECSCC
T ss_pred             HHHHHHHcCCCCcEEEEcCCc
Confidence              233333 369999999884

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.013  Score=54.36  Aligned_cols=106  Identities=12%  Similarity=0.231  Sum_probs=71.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECC-------------------chhHHHHHHHHHHhhhhccccccC
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG  137 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~-------------------~~k~~~l~~~~~~~~l~~~~~~~g  137 (530)
                      ....+|+|.| .|++|++++..|++.|. ++++++.+                   ..|...+.+.+++.          
T Consensus        28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~----------   96 (247)
T d1jw9b_          28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI----------   96 (247)
T ss_dssp             HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH----------
T ss_pred             HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHh----------
Confidence            3456899999 77799999999999995 77777643                   23556666656554          


Q ss_pred             CCCCCCeEEEEecCC-CHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          138 IQPVEMLELVECDLE-KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       138 ~~~~~~v~~v~~Dl~-d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                         ++.+.+...+.. +.......+..+|+||.+..               |...-..+-++|.++++ .+|+.+..
T Consensus        97 ---np~~~i~~~~~~~~~~~~~~~~~~~divid~~d---------------~~~~~~~in~~~~~~~i-p~i~g~~~  154 (247)
T d1jw9b_          97 ---NPHIAITPVNALLDDAELAALIAEHDLVLDCTD---------------NVAVRNQLNAGCFAAKV-PLVSGAAI  154 (247)
T ss_dssp             ---CTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS---------------SHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred             ---hcccchhhhhhhhhhccccccccccceeeeccc---------------hhhhhhhHHHHHHHhCC-Cccccccc
Confidence               255555555442 34556677789999998853               13334455667777776 67765443

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.28  E-value=0.0071  Score=53.61  Aligned_cols=77  Identities=21%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE-ecCCC-H
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEK-R  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d-~  154 (530)
                      ..+.+|+|+|+ |.+|...+..+...| .+|+++++++++++...+    +         |     --+++. -|-.+ .
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~----~---------G-----A~~~in~~~~~~~~   88 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA----V---------G-----ATECISPKDSTKPI   88 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----H---------T-----CSEEECGGGCSSCH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh----c---------C-----CcEEECccccchHH
Confidence            45678999985 999999999999999 589999999998775433    1         2     112221 12222 2


Q ss_pred             hhHHHHh--CCCcEEEEcccC
Q 009648          155 VQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag~  173 (530)
                      +.+.+..  .++|+||.+.|.
T Consensus        89 ~~~~~~~~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          89 SEVLSEMTGNNVGYTFEVIGH  109 (176)
T ss_dssp             HHHHHHHHTSCCCEEEECSCC
T ss_pred             HHHHHHhccccceEEEEeCCc
Confidence            2233333  579999999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.25  E-value=0.0078  Score=52.80  Aligned_cols=77  Identities=14%  Similarity=0.109  Sum_probs=50.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+.+|+|.|+ |.+|...+..+...|. .|+++++++.+.+.+.+    +              ...+++..+-.+.+.
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~--------------ga~~~i~~~~~~~~~   91 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----L--------------GADHVVDARRDPVKQ   91 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----T--------------TCSEEEETTSCHHHH
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----c--------------ccceeecCcccHHHH
Confidence            34678999985 9999999998887884 77778888877665432    1              122344322222333


Q ss_pred             HHHHh--CCCcEEEEcccC
Q 009648          157 IEPAL--GNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~--~~vD~VI~~Ag~  173 (530)
                      +.+..  +++|+||.++|.
T Consensus        92 ~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          92 VMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             HHHHTTTCCEEEEEESSCC
T ss_pred             HHHhhCCCCceEEEEecCc
Confidence            33433  368999999984

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0058  Score=53.80  Aligned_cols=69  Identities=22%  Similarity=0.274  Sum_probs=53.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|+|+|.| .|.||+.+++.|...|.+|++..+++-+.-+  ..     ++            +.+        ...
T Consensus        21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~--A~-----~d------------G~~--------v~~   72 (163)
T d1li4a1          21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQ--AA-----ME------------GYE--------VTT   72 (163)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH--HH-----HT------------TCE--------ECC
T ss_pred             eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHH--hh-----cC------------ceE--------eee
Confidence            56789999999 9999999999999999999999998744222  11     11            122        224


Q ss_pred             HHHHhCCCcEEEEcccC
Q 009648          157 IEPALGNASVVICCIGA  173 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~  173 (530)
                      +++++...|+||.+.|.
T Consensus        73 ~~~a~~~adivvtaTGn   89 (163)
T d1li4a1          73 MDEACQEGNIFVTTTGC   89 (163)
T ss_dssp             HHHHTTTCSEEEECSSC
T ss_pred             hhhhhhhccEEEecCCC
Confidence            77888899999999874

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.22  E-value=0.0013  Score=58.92  Aligned_cols=35  Identities=26%  Similarity=0.106  Sum_probs=29.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~  114 (530)
                      |++|.|.||||++|+.|++.|.++- +++..+..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            4689999999999999999999874 6777776443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.12  E-value=0.0056  Score=53.61  Aligned_cols=42  Identities=17%  Similarity=0.130  Sum_probs=33.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL  120 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l  120 (530)
                      ..+.+|||.|+ |++|...+..+...|. .|++.++++.+.+..
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a   69 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA   69 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH
Confidence            45678999997 6799999999999995 667677777776544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.10  E-value=0.0058  Score=51.62  Aligned_cols=30  Identities=13%  Similarity=0.197  Sum_probs=27.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEE
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG  110 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~  110 (530)
                      |+|.|.|++|..|+.|++.+.+.|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            579999999999999999999999988764

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.03  E-value=0.0059  Score=54.64  Aligned_cols=64  Identities=25%  Similarity=0.347  Sum_probs=50.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++++|....                                .+..-.+++
T Consensus        40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~--------------------------------~~~~~~~~l   86 (181)
T d1qp8a1          40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE--------------------------------GPWRFTNSL   86 (181)
T ss_dssp             CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC--------------------------------SSSCCBSCS
T ss_pred             ccCceEEEec-cccccccceeeeeccccccccccccccc--------------------------------cceeeeech
Confidence            5688999999 7889999999999999999999987531                                011112357


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      ++++..+|+|+.+.-..
T Consensus        87 ~ell~~sDiv~~~~pl~  103 (181)
T d1qp8a1          87 EEALREARAAVCALPLN  103 (181)
T ss_dssp             HHHHTTCSEEEECCCCS
T ss_pred             hhhhhccchhhcccccc
Confidence            88999999999987644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.84  E-value=0.015  Score=50.28  Aligned_cols=73  Identities=18%  Similarity=0.211  Sum_probs=51.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC---Hh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---RV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---~~  155 (530)
                      .+.+|||.|+ |.||...++.+...|++|+++++++++.+.+.+    +         |      .+.+ .|..+   .+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~----~---------G------a~~~-~~~~~~~~~~   85 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----L---------G------ADLV-VNPLKEDAAK   85 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----T---------T------CSEE-ECTTTSCHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh----c---------C------ccee-cccccchhhh
Confidence            4678999975 889999999999999999999999988766532    2         1      2222 23322   23


Q ss_pred             hHHHHhCCCcEEEEccc
Q 009648          156 QIEPALGNASVVICCIG  172 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag  172 (530)
                      .+.....+.|.+|.+++
T Consensus        86 ~~~~~~~~~~~~v~~~~  102 (168)
T d1rjwa2          86 FMKEKVGGVHAAVVTAV  102 (168)
T ss_dssp             HHHHHHSSEEEEEESSC
T ss_pred             hcccccCCCceEEeecC
Confidence            35555677777777765

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.79  E-value=0.0055  Score=55.65  Aligned_cols=68  Identities=15%  Similarity=0.066  Sum_probs=51.2

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+.+++.|..-|.+|++.++........                     .        ....++
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---------------------~--------~~~~~~   89 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---------------------K--------GYYVDS   89 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---------------------T--------TCBCSC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc---------------------c--------eeeecc
Confidence            35678999999 99999999999999999999998765432210                     0        112245


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.++++.+|+|+.++-..
T Consensus        90 l~~~l~~sDii~~~~plt  107 (197)
T d1j4aa1          90 LDDLYKQADVISLHVPDV  107 (197)
T ss_dssp             HHHHHHHCSEEEECSCCC
T ss_pred             ccccccccccccccCCcc
Confidence            788888999998887543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.70  E-value=0.045  Score=45.90  Aligned_cols=90  Identities=11%  Similarity=0.050  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCC---cHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           78 KDDNLAFVAGAT---GKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        78 ~~~k~VLVTGAt---G~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .+.++|.|.||+   +.+|..+.+.|.+.| ++|+.+..+....                        .++..+ -+|.|
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i------------------------~G~~~y-~sl~d   60 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV------------------------QGVKAY-KSVKD   60 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE------------------------TTEECB-SSTTS
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc------------------------CCeEee-cchhh
Confidence            456899999999   999999999988766 6888876543211                        112221 23333


Q ss_pred             HhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                            +=..+|.+|-+..                -..+..+++.|.+.|++.+|++|+..
T Consensus        61 ------lp~~vDlvvi~vp----------------~~~~~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          61 ------IPDEIDLAIIVVP----------------KRFVKDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             ------CSSCCSEEEECSC----------------HHHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred             ------cCCCCceEEEecC----------------hHHhHHHHHHHHHcCCCEEEEecccc
Confidence                  2346899988853                23467788999999999888887653

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.65  E-value=0.0024  Score=56.61  Aligned_cols=80  Identities=15%  Similarity=0.140  Sum_probs=49.2

Q ss_pred             CCEEEEECCCcHHHH-HHHHHHHhC-----CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCC
Q 009648           80 DNLAFVAGATGKVGS-RTVRELLKL-----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~-~Lv~~Ll~~-----G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d  153 (530)
                      ..+|.|.||.+ +|. .++..|+.+     +.+|++++.++++++...+.+..+.-.     .+    ....+...    
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~----   68 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE-----KA----PDIEFAAT----   68 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH-----HC----TTSEEEEE----
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHH-----hC----CCcceEec----
Confidence            45799999854 454 344555543     248999999998877544444332100     01    12222221    


Q ss_pred             HhhHHHHhCCCcEEEEcccCC
Q 009648          154 RVQIEPALGNASVVICCIGAS  174 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag~~  174 (530)
                       .+..++++++|+||+.+|..
T Consensus        69 -~d~~eal~~AD~Vvitag~~   88 (167)
T d1u8xx1          69 -TDPEEAFTDVDFVMAHIRVG   88 (167)
T ss_dssp             -SCHHHHHSSCSEEEECCCTT
T ss_pred             -CChhhccCCCCEEEECCCcC
Confidence             23678899999999999864

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.64  E-value=0.0037  Score=56.19  Aligned_cols=39  Identities=23%  Similarity=0.094  Sum_probs=33.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      |+|.|.| .|++|..++..| ++|++|++++-++.+.+.+.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            6899997 899999998655 67999999999998877654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=95.60  E-value=0.014  Score=52.17  Aligned_cols=116  Identities=14%  Similarity=0.091  Sum_probs=68.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEE-------EEecC-
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-------VECDL-  151 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~-------v~~Dl-  151 (530)
                      .-+|+|+| .|-.|.+-++.....|.+|++++.+..+.+.+.....+. +.-     .......++.       ..-++ 
T Consensus        29 pa~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~-i~~-----~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          29 PARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKF-ITV-----DDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEE-CCC----------------------------
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcce-EEE-----eccccccccccccchhhcCHHHH
Confidence            34799999 799999999999999999999999999888775421100 000     0000000000       00011 


Q ss_pred             -CCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          152 -EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       152 -~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                       .+.+.+.+.+..+|+||..+-........         .-++.+++.|+...  -||=++..
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~~aP~---------lit~~mv~~Mk~GS--VIVDvaid  153 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGKPAPV---------LITEEMVTKMKPGS--VIIDLAVE  153 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTSCCCC---------CSCHHHHTTSCTTC--EEEETTGG
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCcccce---------eehHHHHHhcCCCc--EEEEEeec
Confidence             12455778889999999998643322111         12555666665433  35656553

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.47  E-value=0.0081  Score=51.72  Aligned_cols=41  Identities=22%  Similarity=0.422  Sum_probs=36.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~  122 (530)
                      |+|.+.| +|.+|.++++.|++.| ++|++.+|+.++.+.+.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~   42 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK   42 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence            5799998 5999999999999887 999999999988877654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.45  E-value=0.0094  Score=54.10  Aligned_cols=38  Identities=21%  Similarity=0.322  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      +|...++|+|.| .|..|..++..|.++|++|+++.|+.
T Consensus         2 ~~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456678999999 89999999999999999999999864

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.44  E-value=0.044  Score=48.63  Aligned_cols=37  Identities=16%  Similarity=0.068  Sum_probs=33.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      ...+++|+|.| +|..|...+..|.++||+|+++.+..
T Consensus        40 ~~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence            35578999999 89999999999999999999999964

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.01  Score=48.81  Aligned_cols=34  Identities=18%  Similarity=0.073  Sum_probs=31.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .++|+|.| .|++|..++..|.+.|++|+++.|..
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            46899999 89999999999999999999999975

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.36  E-value=0.013  Score=52.95  Aligned_cols=70  Identities=16%  Similarity=0.142  Sum_probs=52.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+.+++.|..-|.+|++.+|.........                           .++....+
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------------------------~~~~~~~~   97 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA---------------------------LGLQRVST   97 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH---------------------------HTCEECSS
T ss_pred             eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh---------------------------hccccccc
Confidence            46788999998 899999999999999999999998754322210                           11112345


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++..+|+|+.+....
T Consensus        98 l~~ll~~sD~i~~~~plt  115 (193)
T d1mx3a1          98 LQDLLFHSDCVTLHCGLN  115 (193)
T ss_dssp             HHHHHHHCSEEEECCCCC
T ss_pred             hhhccccCCEEEEeeccc
Confidence            788888999998887644

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.026  Score=57.09  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=53.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc-------------------hhHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~-------------------~k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ++.+|||.|+ |+||.++++.|+..|. ++++++.+.                   .|...+.+.++++           
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~-----------  103 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR-----------  103 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhh-----------
Confidence            3468999996 5699999999999996 888887642                   2344444444443           


Q ss_pred             CCCCCeEEEEecCCCHhhHHHHhCCCcEEEEcc
Q 009648          139 QPVEMLELVECDLEKRVQIEPALGNASVVICCI  171 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~~sl~~a~~~vD~VI~~A  171 (530)
                      .+.-++..+..++.+..  ...++++|+||++.
T Consensus       104 np~v~i~~~~~~i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         104 VPNCNVVPHFNKIQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             STTCCCEEECSCGGGBC--HHHHTTCSEEEECC
T ss_pred             CCCCceEeeeccccchH--HHHHHhcchheecc
Confidence            11234455555554422  46789999999985

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.21  E-value=0.011  Score=52.98  Aligned_cols=67  Identities=13%  Similarity=0.020  Sum_probs=50.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.++......                       ...  .  .   .+++
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------------------~~~--~--~---~~~l   90 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-----------------------GNA--T--Q---VQHL   90 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----------------------TTC--E--E---CSCH
T ss_pred             ccceEEEEee-cccchhhhhhhcccccceEeeccccccchh-----------------------hhh--h--h---hhhH
Confidence            5678999998 999999999999999999999998653110                       011  1  1   1357


Q ss_pred             HHHhCCCcEEEEcccCCC
Q 009648          158 EPALGNASVVICCIGASE  175 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~  175 (530)
                      +++++.+|+|+.++....
T Consensus        91 ~ell~~sDii~i~~plt~  108 (188)
T d1sc6a1          91 SDLLNMSDVVSLHVPENP  108 (188)
T ss_dssp             HHHHHHCSEEEECCCSST
T ss_pred             HHHHhhccceeecccCCc
Confidence            788889999998876543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.17  E-value=0.025  Score=51.30  Aligned_cols=42  Identities=21%  Similarity=0.256  Sum_probs=37.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN  119 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~  119 (530)
                      +.++++|+|-| -|.+|+++++.|.+.|.+|++.+.+..+...
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            46789999998 9999999999999999999999988766554

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.16  E-value=0.02  Score=51.14  Aligned_cols=72  Identities=13%  Similarity=0.046  Sum_probs=52.0

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+.+++.|..-|.+|.+.+|..........                          ..+....+
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------------------------~~~~~~~~   93 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE--------------------------LNLTWHAT   93 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH--------------------------HTCEECSS
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc--------------------------ccccccCC
Confidence            35678999999 8999999999999999999999986533222111                          01112345


Q ss_pred             HHHHhCCCcEEEEcccCCC
Q 009648          157 IEPALGNASVVICCIGASE  175 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~  175 (530)
                      +.++++.+|+|+.+.....
T Consensus        94 l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          94 REDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             HHHHGGGCSEEEECSCCCT
T ss_pred             HHHHHHhccchhhcccccc
Confidence            7788999999988776443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.09  E-value=0.0064  Score=53.48  Aligned_cols=99  Identities=19%  Similarity=0.256  Sum_probs=59.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++|+|.|++|.+|+.|++.+.+. ++++.+.. |.......  +      .-|..  .+. ....+.+ .      .++
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g--~------d~~~~--~~~-~~~~~~~-~------~~~   65 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLG--S------DAGEL--AGA-GKTGVTV-Q------SSL   65 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCS--C------CTTCS--SSS-SCCSCCE-E------SCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhcc--c------hhhhh--hcc-ccCCcee-e------ccH
Confidence            468999999999999999999886 67776654 33221000  0      00000  000 0011111 1      223


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCC
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG  214 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~  214 (530)
                      ...++.+|+||...-                -.++..+++.|.++++ .+|. .|.|
T Consensus        66 ~~~~~~~DViIDFs~----------------p~~~~~~~~~a~~~~~-~~Vi-GTTG  104 (162)
T d1diha1          66 DAVKDDFDVFIDFTR----------------PEGTLNHLAFCRQHGK-GMVI-GTTG  104 (162)
T ss_dssp             TTTTTSCSEEEECSC----------------HHHHHHHHHHHHHTTC-EEEE-CCCC
T ss_pred             HHHhcccceEEEecc----------------HHHHHHHHHHHHhccc-eeEE-ecCC
Confidence            456678999998842                3567889999999986 6664 5544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.06  E-value=0.079  Score=43.47  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=56.4

Q ss_pred             CEEEEECCC---cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           81 NLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        81 k~VLVTGAt---G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      |+|.|.|++   +..|..+++.|++.||+|+.+..+.+..                        .++..+       .++
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------------------------~G~~~y-------~sl   50 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGLKCY-------RSV   50 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEECB-------SSG
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------------------------cCcccc-------ccc
Confidence            579999998   7799999999999999988875433210                        112221       223


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      .++=..+|+++-+..                -..+..+++.|.+.|++.+++
T Consensus        51 ~~lp~~~D~vvi~vp----------------~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          51 RELPKDVDVIVFVVP----------------PKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             GGSCTTCCEEEECSC----------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             hhccccceEEEEEeC----------------HHHHHHHHHHHHhcCCceEEe
Confidence            333356898887753                234677888888999976654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.06  E-value=0.13  Score=40.61  Aligned_cols=74  Identities=18%  Similarity=0.192  Sum_probs=49.9

Q ss_pred             CCCCCCEEEEECCCcHHH-HHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           76 DSKDDNLAFVAGATGKVG-SRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        76 ~~~~~k~VLVTGAtG~IG-~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      ++...++|.+.|-.| +| +.|++.|.++|++|.+.++.......   .+.+               .++.+..++-.  
T Consensus         4 ~~~~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~~~---~L~~---------------~Gi~v~~g~~~--   62 (96)
T d1p3da1           4 EMRRVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVVTQ---RLAQ---------------AGAKIYIGHAE--   62 (96)
T ss_dssp             CCTTCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHHHH---HHHH---------------TTCEEEESCCG--
T ss_pred             cchhCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChhhh---HHHH---------------CCCeEEECCcc--
Confidence            356678999998554 55 77899999999999999997643222   1111               34555544432  


Q ss_pred             hhHHHHhCCCcEEEEcccCC
Q 009648          155 VQIEPALGNASVVICCIGAS  174 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~  174 (530)
                          ..+.++|.||...|..
T Consensus        63 ----~~i~~~d~vV~S~AI~   78 (96)
T d1p3da1          63 ----EHIEGASVVVVSSAIK   78 (96)
T ss_dssp             ----GGGTTCSEEEECTTSC
T ss_pred             ----ccCCCCCEEEECCCcC
Confidence                2246789999987764

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.05  E-value=0.012  Score=51.79  Aligned_cols=101  Identities=16%  Similarity=0.197  Sum_probs=59.0

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhC-CCeEEEEE-CCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~-R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ++.||.|.| +|++|+.+++.|.+. +++++++. |+....                        ....+..     ..+
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------------------------~~~~~~~-----~~~   51 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------------------------TKTPVFD-----VAD   51 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------------------------SSSCEEE-----GGG
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc------------------------ccccccc-----chh
Confidence            356899999 799999999999876 57777655 443211                        1111111     122


Q ss_pred             HHHHhCCCcEEEEcccCCCC------------ccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          157 IEPALGNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~------------~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      +..+..++|+||.|.....+            ..-........+......|.++|++.|.  .++++
T Consensus        52 ~~~~~~~~D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~--~~~i~  116 (170)
T d1f06a1          52 VDKHADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN--VALVS  116 (170)
T ss_dssp             GGGTTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTC--EEECS
T ss_pred             hhhhccccceEEEeCCCcccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCc--eEEEe
Confidence            34445688999988764211            1111122344555666777777777664  44444

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.98  E-value=0.027  Score=49.51  Aligned_cols=118  Identities=8%  Similarity=-0.075  Sum_probs=64.2

Q ss_pred             CCEEEEECC-CcHHHHHHHHHHHhCC----CeEEEEECCchh--HHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           80 DNLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        80 ~k~VLVTGA-tG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      +++|.|.|| +.+.|..++..|....    -++.++++++++  .+.+....... ..+        ....+.+  ...+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~-~~~--------~~~~~~~--~~~t   69 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRM-VEK--------AGVPIEI--HLTL   69 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHH-HHH--------TTCCCEE--EEES
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHH-HHh--------cCCCcee--eecC
Confidence            368999996 3445555555555432    489999988754  33322111111 000        0012222  2222


Q ss_pred             CHhhHHHHhCCCcEEEEcccCCCCccC---------------CCC-----cchHhHHHHHHHHHHHHHhcCCCEEEEEc
Q 009648          153 KRVQIEPALGNASVVICCIGASEKEVF---------------DIT-----GPYRIDFQATKNLVDAATIAKVNHFIMVS  211 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~~~~~~~---------------~~~-----~~~~vNv~gt~~Ll~aa~~~gv~r~V~iS  211 (530)
                      |   ..++++++|+||++||......+               +..     ....-|+...+.+++.+.+..-.-++++-
T Consensus        70 d---~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~v  145 (169)
T d1s6ya1          70 D---RRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINF  145 (169)
T ss_dssp             C---HHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             C---chhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEe
Confidence            3   56788999999999986432110               000     01234677778888888887665555543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.90  E-value=0.023  Score=51.11  Aligned_cols=71  Identities=7%  Similarity=0.043  Sum_probs=51.6

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+++|.|.| .|.||+.+++.|...|.+|.+.++..........                          ......++
T Consensus        44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------------------------~~~~~~~~   96 (191)
T d1gdha1          44 KLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------------------------YQATFHDS   96 (191)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------------------------HTCEECSS
T ss_pred             eecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--------------------------ccccccCC
Confidence            45688999999 8999999999999999999999986543332111                          00111245


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.+++..+|+|+.+....
T Consensus        97 l~~ll~~sD~v~l~~plt  114 (191)
T d1gdha1          97 LDSLLSVSQFFSLNAPST  114 (191)
T ss_dssp             HHHHHHHCSEEEECCCCC
T ss_pred             HHHHHhhCCeEEecCCCC
Confidence            788889999998776544

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.014  Score=60.78  Aligned_cols=109  Identities=14%  Similarity=0.101  Sum_probs=67.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch-------------------hHHHHHHHHHHhhhhccccccCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKGI  138 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~-------------------k~~~l~~~~~~~~l~~~~~~~g~  138 (530)
                      ...+|+|.|+ |.+|..+++.|+..| .++++++.+.-                   +...+.+.+.++           
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l-----------   91 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-----------   91 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-----------
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-----------
Confidence            3458999996 779999999999999 57888765432                   233333333332           


Q ss_pred             CCCCCeEEEEecCCCH-hhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          139 QPVEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       139 ~~~~~v~~v~~Dl~d~-~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .+.-+++++..++.+. +.....+.++|+||.+..               |...-..+-++|+++++ .||++.+.|.
T Consensus        92 Np~v~i~~~~~~~~~~~~~~~~~~~~~dvVv~~~~---------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~  153 (529)
T d1yova1          92 NSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQL---------------PESTSLRLADVLWNSQI-PLLICRTYGL  153 (529)
T ss_dssp             CTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESC---------------CHHHHHHHHHHHHHHTC-CEEEEEEETT
T ss_pred             CCCCcEEEEcCCchhhhhhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence            1112333443333221 111245678999998842               24445667888888887 6888877654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.72  E-value=0.062  Score=46.30  Aligned_cols=47  Identities=23%  Similarity=0.312  Sum_probs=34.8

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQM  127 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~  127 (530)
                      +|+|.|+|+||-||...++-+.+.  .++|++++=+. ....|.+...++
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef   50 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRT   50 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHT
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhh
Confidence            579999999999999999888775  58999877443 334444444444

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.71  E-value=0.027  Score=50.20  Aligned_cols=70  Identities=17%  Similarity=0.151  Sum_probs=51.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...++++.|.| .|.||+.+++.|..-|.+|++.+|...+.....                    ..++        ..+
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--------------------~~~~--------~~~   91 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--------------------LGIE--------LLS   91 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--------------------HTCE--------ECC
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh--------------------cCce--------ecc
Confidence            35678899999 899999999999999999999998765433321                    0111        124


Q ss_pred             HHHHhCCCcEEEEcccCCC
Q 009648          157 IEPALGNASVVICCIGASE  175 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~  175 (530)
                      ++++++.+|+|+.+...+.
T Consensus        92 l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          92 LDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             HHHHHHHCSEEEECCCCST
T ss_pred             HHHHHhhCCEEEEcCCCCc
Confidence            6788889999988876543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.67  E-value=0.092  Score=44.33  Aligned_cols=72  Identities=24%  Similarity=0.228  Sum_probs=44.9

Q ss_pred             EEEEECCCcHHHHHHHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA  160 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a  160 (530)
                      ||.|.|++|.+|+.|++.+.+. ++++.+..-..+....+..                   .+.+ +..|++.++.+.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~-------------------~~~D-vvIDFS~p~~~~~~   60 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPDVVMGN   60 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT-------------------TTCS-EEEECCCTTTHHHH
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc-------------------ccCC-EEEEcccHHHHHHH
Confidence            6999999999999999998775 5787765433222222110                   1222 33677777665544


Q ss_pred             h-----CCCcEEEEcccC
Q 009648          161 L-----GNASVVICCIGA  173 (530)
Q Consensus       161 ~-----~~vD~VI~~Ag~  173 (530)
                      +     .++-+||-..|.
T Consensus        61 ~~~~~~~~~~~ViGTTG~   78 (135)
T d1yl7a1          61 LEFLIDNGIHAVVGTTGF   78 (135)
T ss_dssp             HHHHHHTTCEEEECCCCC
T ss_pred             HHHHHhcCCCEEEecccc
Confidence            4     356777655553

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.63  E-value=0.13  Score=43.41  Aligned_cols=84  Identities=13%  Similarity=0.039  Sum_probs=58.2

Q ss_pred             CCCEEEEECCC---cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           79 DDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        79 ~~k~VLVTGAt---G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.++|.|.||+   +..|..+++.|.+.||+|+.+..+....                        .++..+       .
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------------------------~G~~~~-------~   66 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------------------------LGRKCY-------P   66 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEECB-------S
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------------------------CCCccc-------c
Confidence            35789999999   7899999999999999998875443210                        111111       1


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                      ++.++-..+|.|+-+..                -..+..+++.|.+.|++.+++
T Consensus        67 sl~dlp~~iD~v~i~vp----------------~~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          67 SVLDIPDKIEVVDLFVK----------------PKLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             SGGGCSSCCSEEEECSC----------------HHHHHHHHHHHHHHTCSEEEE
T ss_pred             cccccCccceEEEEEeC----------------HHHHHHHHHHHHHhCCCEEEE
Confidence            23333356898887753                345778888888889976554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.54  E-value=0.041  Score=48.03  Aligned_cols=70  Identities=17%  Similarity=0.309  Sum_probs=54.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +..+|+++|.| =|.+|+.+++.|...|.+|+++.+++-+  .|+..     ++            +.++        ..
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~--alqA~-----md------------Gf~v--------~~   71 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC--AIQAV-----ME------------GFNV--------VT   71 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH--HHHHH-----TT------------TCEE--------CC
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh--hHHHH-----hc------------CCcc--------Cc
Confidence            57789999999 9999999999999999999999998843  32221     12            2222        23


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                      +.++++..|+||.+.|-.
T Consensus        72 ~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          72 LDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             HHHHTTTCSEEEECCSSS
T ss_pred             hhHccccCcEEEEcCCCC
Confidence            678899999999998853

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.54  E-value=0.026  Score=46.73  Aligned_cols=36  Identities=14%  Similarity=0.175  Sum_probs=32.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ..++|+|.| .|++|..++..|.++|.+|+++.|.+.
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            357899999 899999999999999999999999764

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.54  E-value=0.12  Score=45.35  Aligned_cols=98  Identities=12%  Similarity=0.090  Sum_probs=57.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEEC-CchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec-------
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-------  150 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R-~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-------  150 (530)
                      .+||.|-| -|-|||.++|.|..+. .+|+++.. .+.....   .+..+               ++..+..+       
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~---~l~~~---------------~~~~~~~~~~~~~~~   62 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAY---RAKEL---------------GIPVYAASEEFIPRF   62 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHH---HHHHT---------------TCCEEESSGGGHHHH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHH---Hhhhc---------------Cceeecccccceeee
Confidence            46899999 7999999999998875 67776653 3322111   11111               11111111       


Q ss_pred             ----CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCC
Q 009648          151 ----LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL  213 (530)
Q Consensus       151 ----l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~  213 (530)
                          +.....+..++.++|+||-|.|...                +..-++.-.++|+ +.|++|.-
T Consensus        63 ~~~~~~~~~~~~~~~~~vDvViEcTG~f~----------------~~~~~~~hl~~G~-k~Vi~s~~  112 (172)
T d2czca2          63 EKEGFEVAGTLNDLLEKVDIIVDATPGGI----------------GAKNKPLYEKAGV-KAIFQGGE  112 (172)
T ss_dssp             HHHTCCCSCBHHHHHTTCSEEEECCSTTH----------------HHHHHHHHHHHTC-EEEECTTS
T ss_pred             cccCccccchhhhhhccCCEEEECCCCCC----------------CHHHHHHHHHcCC-CEEEECCC
Confidence                1122345566779999999998642                2233344456787 66666753

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.43  E-value=0.026  Score=46.06  Aligned_cols=35  Identities=17%  Similarity=0.157  Sum_probs=32.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .++|+|.| .|++|..++..|.+.|.+|+++.|...
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence            47899999 899999999999999999999998764

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.37  E-value=0.07  Score=46.24  Aligned_cols=77  Identities=21%  Similarity=0.270  Sum_probs=49.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec-CCC-H
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-LEK-R  154 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-l~d-~  154 (530)
                      ..+.+|+|+|+ |.+|...+..+...| .+|+++++++++.+...+    +         |     --+++..+ -.+ .
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~----~---------G-----Ad~~in~~~~~~~~   87 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----F---------G-----ATDFVNPNDHSEPI   87 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----T---------T-----CCEEECGGGCSSCH
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH----c---------C-----CcEEEcCCCcchhH
Confidence            45678999996 557777777777776 579999999988776543    2         1     12333221 111 1


Q ss_pred             hhHHHHh--CCCcEEEEcccC
Q 009648          155 VQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       155 ~sl~~a~--~~vD~VI~~Ag~  173 (530)
                      ..+....  +++|+||.+.|.
T Consensus        88 ~~~~~~~~~~G~d~vid~~G~  108 (175)
T d1cdoa2          88 SQVLSKMTNGGVDFSLECVGN  108 (175)
T ss_dssp             HHHHHHHHTSCBSEEEECSCC
T ss_pred             HHHHHhhccCCcceeeeecCC
Confidence            2233333  579999999984

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.29  E-value=0.033  Score=46.03  Aligned_cols=35  Identities=23%  Similarity=0.218  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      ..++|+|.| .|++|..++..|.+.|++|+++.|..
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            457899998 89999999999999999999998865

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.19  E-value=0.033  Score=45.74  Aligned_cols=35  Identities=14%  Similarity=0.228  Sum_probs=31.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      ..++|+|.| .|++|..++..|.+.|.+|+++.|..
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence            357899999 89999999999999999999999965

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.00  E-value=0.024  Score=50.39  Aligned_cols=33  Identities=18%  Similarity=0.321  Sum_probs=27.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCc
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV  114 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~  114 (530)
                      -||.|-| .|.|||.++|.|.+++ .+|+++....
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~   35 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTS   35 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCC
Confidence            3799998 8999999999999875 7888876543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.00  E-value=0.25  Score=38.37  Aligned_cols=69  Identities=10%  Similarity=0.049  Sum_probs=45.7

Q ss_pred             CEEEEECCCcHHHH-HHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGS-RTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~-~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      |+|.++|-.| +|- .|++.|.++|++|.+.++.......   ++++.               ++.+..+.  +.+    
T Consensus         2 ~~ihfiGIgG-~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~---------------Gi~i~~gh--~~~----   56 (89)
T d1j6ua1           2 MKIHFVGIGG-IGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKL---------------GIPIFVPH--SAD----   56 (89)
T ss_dssp             CEEEEETTTS-HHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHT---------------TCCEESSC--CTT----
T ss_pred             cEEEEEeECH-HHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHC---------------CCeEEeee--ccc----
Confidence            6788888655 554 7899999999999999998743222   23332               34443331  211    


Q ss_pred             HhCCCcEEEEcccCC
Q 009648          160 ALGNASVVICCIGAS  174 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~  174 (530)
                      .++++|.||...+..
T Consensus        57 ~i~~~d~vV~SsAI~   71 (89)
T d1j6ua1          57 NWYDPDLVIKTPAVR   71 (89)
T ss_dssp             SCCCCSEEEECTTCC
T ss_pred             ccCCCCEEEEecCcC
Confidence            136799999998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.99  E-value=0.061  Score=47.13  Aligned_cols=39  Identities=28%  Similarity=0.205  Sum_probs=34.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ...+|+|+|.|.+..+|+-|+..|.++|+.|+++.....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            367899999999999999999999999999998765543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.91  E-value=0.038  Score=45.36  Aligned_cols=36  Identities=19%  Similarity=0.071  Sum_probs=32.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ..++|+|.| +|+||..++..|.+.|.+|+++.|...
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence            357899999 899999999999999999999998753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.84  E-value=0.024  Score=51.28  Aligned_cols=66  Identities=17%  Similarity=0.189  Sum_probs=49.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++|.|.| .|.||+.+++.|..-|.+|++.+|...+..                      ...+.        ..++
T Consensus        43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----------------------~~~~~--------~~~l   91 (199)
T d1dxya1          43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----------------------HPDFD--------YVSL   91 (199)
T ss_dssp             GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC----------------------CTTCE--------ECCH
T ss_pred             ccceeeeeee-cccccccccccccccceeeeccCCccchhh----------------------hcchh--------HHHH
Confidence            5678999999 899999999999999999999998653210                      01111        1347


Q ss_pred             HHHhCCCcEEEEcccCC
Q 009648          158 EPALGNASVVICCIGAS  174 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~  174 (530)
                      .++++.+|+|+.+.-..
T Consensus        92 ~~l~~~~D~v~~~~plt  108 (199)
T d1dxya1          92 EDLFKQSDVIDLHVPGI  108 (199)
T ss_dssp             HHHHHHCSEEEECCCCC
T ss_pred             HHHHHhcccceeeeccc
Confidence            77888899998886544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.83  E-value=0.035  Score=45.87  Aligned_cols=34  Identities=18%  Similarity=0.131  Sum_probs=31.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .++++|.| +|+||..++..|.+.|.+|+++.|..
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence            46899999 89999999999999999999999865

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.094  Score=46.06  Aligned_cols=39  Identities=21%  Similarity=0.089  Sum_probs=34.9

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ...+++|+|.|.+..+|+-|+..|+++|..|+.+.....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~   74 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA   74 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence            467899999999999999999999999999999876553

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.67  E-value=0.16  Score=43.22  Aligned_cols=39  Identities=15%  Similarity=0.083  Sum_probs=32.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      ||.+.| .|.+|..+++.|++.|+.| +..|+.++...+.+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~   40 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE   40 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence            588999 6999999999999999866 57888877766554

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.65  E-value=0.1  Score=44.88  Aligned_cols=47  Identities=23%  Similarity=0.297  Sum_probs=34.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCchhHHHHHHHHHHh
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQM  127 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~~k~~~l~~~~~~~  127 (530)
                      ||+|.|+|+||-||...++-+.++  .++|++++=+. ....+.++..++
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f   49 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEF   49 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHH
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHH
Confidence            468999999999999999988876  48999887433 234444444444

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.65  E-value=0.026  Score=48.22  Aligned_cols=36  Identities=19%  Similarity=0.342  Sum_probs=32.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~  113 (530)
                      ..++|+|||+|| |.+|.+-++.|++.|.+|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            367899999996 889999999999999999999754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.54  E-value=0.042  Score=45.50  Aligned_cols=34  Identities=18%  Similarity=0.239  Sum_probs=31.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .++|+|.| .|+||..++..|.+.|.+|+++.|..
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence            47899999 79999999999999999999999975

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.46  E-value=0.038  Score=45.52  Aligned_cols=35  Identities=23%  Similarity=0.354  Sum_probs=31.7

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .++|+|.| .|++|..++..|.+.|++|+++.|.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            46899999 899999999999999999999998763

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.38  E-value=0.049  Score=45.66  Aligned_cols=36  Identities=22%  Similarity=0.264  Sum_probs=32.4

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ..++|+|.| +|++|..++..|.+.|.+|+++.|...
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            357899999 899999999999999999999998653

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.34  E-value=0.16  Score=43.89  Aligned_cols=37  Identities=16%  Similarity=0.231  Sum_probs=25.5

Q ss_pred             CCCCEEEEECCCcHHHHHHH-HHHHhC-CCeEEEEE-CCch
Q 009648           78 KDDNLAFVAGATGKVGSRTV-RELLKL-GFRVRAGV-RSVQ  115 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv-~~Ll~~-G~~V~~~~-R~~~  115 (530)
                      .++.+|.|.| +|.||+.+. +.|... ..+++++. |+.+
T Consensus         2 ~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           2 NQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             CSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             CCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            4467999999 999999754 544444 35777764 6654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.34  E-value=0.18  Score=48.38  Aligned_cols=143  Identities=15%  Similarity=0.013  Sum_probs=82.9

Q ss_pred             CCCCEEE-EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-
Q 009648           78 KDDNLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-  155 (530)
Q Consensus        78 ~~~k~VL-VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-  155 (530)
                      ..+++|| +.-++|.++.+++    ..|.+|++++.++..++...+.++..         |   ..+++++.+|..+.. 
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~n---------g---l~~~~~i~~d~~~~~~  207 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLN---------G---LGNVRVLEANAFDLLR  207 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHT---------T---CTTEEEEESCHHHHHH
T ss_pred             hCCCeeeccCCCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHc---------C---CCCcceeeccHHHHhh
Confidence            3567888 6667777765543    44689999999998888776655433         2   246899999986632 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-C-CCEEEEEcCCCccCCCCccccccchhHHHH
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-K-VNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-g-v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~  233 (530)
                      .+...-+.+|+||...-.......+    ..........|++.+.+. . .+.+|+.|-...  .           ....
T Consensus       208 ~~~~~~~~fD~Vi~DpP~~~~~~~~----~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~--~-----------~~~~  270 (318)
T d1wxxa2         208 RLEKEGERFDLVVLDPPAFAKGKKD----VERAYRAYKEVNLRAIKLLKEGGILATASCSHH--M-----------TEPL  270 (318)
T ss_dssp             HHHHTTCCEEEEEECCCCSCCSTTS----HHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT--S-----------CHHH
T ss_pred             hhHhhhcCCCEEEEcCCccccchHH----HHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCcc--c-----------CHHH
Confidence            2333335799999987543332221    122234445566666543 1 124555432211  0           0223


Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q 009648          234 WKRKAEEALIASGLPYTIVR  253 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIvR  253 (530)
                      ....+.+.+...+.++.++.
T Consensus       271 f~~~v~~a~~~a~~~~~~~~  290 (318)
T d1wxxa2         271 FYAMVAEAAQDAHRLLRVVE  290 (318)
T ss_dssp             HHHHHHHHHHHTTCCEEEEE
T ss_pred             HHHHHHHHHHHcCCCEEEEE
Confidence            34445566666787777664

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.23  E-value=0.11  Score=47.98  Aligned_cols=44  Identities=18%  Similarity=0.136  Sum_probs=38.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV  121 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~  121 (530)
                      +.++++|+|-| -|.+|+++++.|.+.|.+|++.+.+......+.
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            46789999999 999999999999999999999998877666544

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.21  E-value=0.045  Score=44.49  Aligned_cols=34  Identities=24%  Similarity=0.176  Sum_probs=31.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .++++|.| .|++|..++..|.+.|++|+++.|.+
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            46899998 89999999999999999999999864

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.18  E-value=0.18  Score=43.10  Aligned_cols=99  Identities=12%  Similarity=0.151  Sum_probs=59.4

Q ss_pred             CCEEEEECCCcHHHHH-HHHHHHhC-CCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGATGKVGSR-TVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~-Lv~~Ll~~-G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      +++|.|.| +|.+|+. .+..|.+. +++|+++ +++.++...+.+.+                  +     +++.  +.
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~------------------~-----~~~~--~~   54 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW------------------R-----IPYA--DS   54 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH------------------T-----CCBC--SS
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc------------------c-----cccc--cc
Confidence            35899999 6899975 45666655 6777764 57777776654422                  1     1122  23


Q ss_pred             HHHHhCCCcEEEEcccCCCC---------ccCC--CCcchHhHHHHHHHHHHHHHhcCC
Q 009648          157 IEPALGNASVVICCIGASEK---------EVFD--ITGPYRIDFQATKNLVDAATIAKV  204 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~---------~~~~--~~~~~~vNv~gt~~Ll~aa~~~gv  204 (530)
                      ++.+++++|+|+.+.-...+         ....  .+..+..|..-...|+++|++.|+
T Consensus        55 ~~~l~~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          55 LSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             HHHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             chhhhhhcccccccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence            45556789999887542100         0000  122344566777788888888775

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.98  E-value=0.062  Score=47.33  Aligned_cols=82  Identities=15%  Similarity=0.063  Sum_probs=54.8

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecC--CCH
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR  154 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~  154 (530)
                      ...+|+|+|.|-+.-+|+-|+..|+++|..|+.+.++......                .+ ....-......|+  ...
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~   88 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT----------------RG-ESLKLNKHHVEDLGEYSE   88 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE----------------SC-CCSSCCCCEEEEEEECCH
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc----------------cc-cceeeeeeccccccccch
Confidence            4678999999999999999999999999999987765321000                00 0000001111222  345


Q ss_pred             hhHHHHhCCCcEEEEcccCCC
Q 009648          155 VQIEPALGNASVVICCIGASE  175 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~~  175 (530)
                      +.+++....+|+||..+|...
T Consensus        89 ~~lk~~~~~aDIvIsavG~p~  109 (171)
T d1edza1          89 DLLKKCSLDSDVVITGVPSEN  109 (171)
T ss_dssp             HHHHHHHHHCSEEEECCCCTT
T ss_pred             hHHhhccccCCEEEEccCCCc
Confidence            668888889999999998643

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.83  E-value=0.053  Score=44.76  Aligned_cols=33  Identities=27%  Similarity=0.294  Sum_probs=30.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~  113 (530)
                      .++++|.| .|+||..++..|.+.|.+|+++.|+
T Consensus        20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            45799999 8999999999999999999999986

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=92.68  E-value=0.22  Score=43.54  Aligned_cols=32  Identities=19%  Similarity=0.304  Sum_probs=26.3

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEEC
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR  112 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R  112 (530)
                      |++|.|-| -|.|||.++|.|..++ .+|+++..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            45899998 8999999999998886 67776654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.48  E-value=0.096  Score=42.52  Aligned_cols=36  Identities=19%  Similarity=0.060  Sum_probs=32.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .+++|+|.| +|+||..++..|.+.|.+|+++.|.+.
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            457899999 899999999999999999999999754

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=92.42  E-value=0.17  Score=49.29  Aligned_cols=75  Identities=13%  Similarity=0.172  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHh-CC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~-~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .+.+++.|+| +|..++..++.|.+ .+ .+|++.+|+.++.+.+.+++++.              .++++..++     
T Consensus       126 ~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~--------------~g~~v~~~~-----  185 (340)
T d1x7da_         126 PNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY--------------SGLTIRRAS-----  185 (340)
T ss_dssp             TTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC--------------TTCEEEECS-----
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhc--------------cCCCceecC-----
Confidence            4567899999 88899988888865 35 69999999999888887765432              356665543     


Q ss_pred             hHHHHhCCCcEEEEccc
Q 009648          156 QIEPALGNASVVICCIG  172 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag  172 (530)
                      +++++++++|+|+.|.+
T Consensus       186 s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         186 SVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             SHHHHHTTCSEEEECCC
T ss_pred             CHHHHHhcCCceeeccc
Confidence            48899999999998865

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.39  E-value=0.11  Score=45.35  Aligned_cols=102  Identities=15%  Similarity=0.146  Sum_probs=63.3

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC-CCeEEEE-ECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~-G~~V~~~-~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .||.|.| +|.+|+..++.|... +++|+++ +++.++.+.+.+.   .++           .....++       ++++
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~---~~~-----------~~~~~~~-------~~~~   59 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA---NNY-----------PESTKIH-------GSYE   59 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH---TTC-----------CTTCEEE-------SSHH
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhc---ccc-----------ccceeec-------CcHH
Confidence            5799999 688999999999876 5788854 6777766655431   110           0112221       2355


Q ss_pred             HHh--CCCcEEEEcccCCCC----------ccC-CCCcchHhHHHHHHHHHHHHHhcCC
Q 009648          159 PAL--GNASVVICCIGASEK----------EVF-DITGPYRIDFQATKNLVDAATIAKV  204 (530)
Q Consensus       159 ~a~--~~vD~VI~~Ag~~~~----------~~~-~~~~~~~vNv~gt~~Ll~aa~~~gv  204 (530)
                      +++  .++|+|+-+.....+          +.. -.+..+..|+.-...|++.+++.++
T Consensus        60 ~ll~~~~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~  118 (184)
T d1ydwa1          60 SLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV  118 (184)
T ss_dssp             HHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred             HhhhccccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence            555  468999987542211          000 0123455677888899999988876

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.38  E-value=0.056  Score=47.07  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=31.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~  115 (530)
                      ++||+|.| +|..|...+.+|.++|+ +|+++.|+..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            57899999 89999999999999998 5999998764

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=92.27  E-value=0.12  Score=42.81  Aligned_cols=94  Identities=14%  Similarity=0.126  Sum_probs=61.9

Q ss_pred             CEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .+|+|.| +|.+|+.|+++|.. .|++++++..+..+..                  | ..-.++.++..     +.+.+
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~------------------G-~~I~Gi~V~~~-----~~l~~   58 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKV------------------G-RPVRGGVIEHV-----DLLPQ   58 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTT------------------T-CEETTEEEEEG-----GGHHH
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhc------------------C-CEECCEEEecH-----HHHHH
Confidence            4799999 78999999998754 4789888776543211                  1 11245666532     33555


Q ss_pred             Hh-CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCc
Q 009648          160 AL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT  215 (530)
Q Consensus       160 a~-~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v  215 (530)
                      .. +.+++++.+..                ....+.+++.|.+.|++.|..++....
T Consensus        59 ~~~~~i~iai~~i~----------------~~~~~~I~d~l~~~gIk~I~~f~~~~l   99 (126)
T d2dt5a2          59 RVPGRIEIALLTVP----------------REAAQKAADLLVAAGIKGILNFAPVVL   99 (126)
T ss_dssp             HSTTTCCEEEECSC----------------HHHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred             HHhhcccEEEEeCC----------------HHHHHHHHHHHHHcCCCEEeecCceee
Confidence            55 34676666643                124577889999999998888776543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.23  E-value=0.055  Score=44.65  Aligned_cols=35  Identities=17%  Similarity=0.140  Sum_probs=32.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .++++|.| .|+||..++..|.+.|.+|+++.|++.
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            57899999 899999999999999999999999763

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.19  E-value=0.066  Score=48.42  Aligned_cols=34  Identities=21%  Similarity=0.131  Sum_probs=31.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      +|||+|.| +|.-|...+.+|.++|++|+++.++.
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            47899999 89999999999999999999998765

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.86  E-value=0.16  Score=43.71  Aligned_cols=100  Identities=13%  Similarity=0.113  Sum_probs=60.2

Q ss_pred             CEEEEECCCcHHHHH-HHHHHHhC-CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           81 NLAFVAGATGKVGSR-TVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        81 k~VLVTGAtG~IG~~-Lv~~Ll~~-G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ++|.|.| +|.+|+. .+..|.+. +.++.++++++++...+.+.+.                  +..+..|+      +
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~------------------~~~~~~~~------~   56 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------------------VSATCTDY------R   56 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------------------CCCCCSST------T
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc------------------cccccccH------H
Confidence            5899999 6788865 55666655 4688888888887776654211                  10011222      2


Q ss_pred             HHh-CCCcEEEEcccCCCC---------ccCC--CCcchHhHHHHHHHHHHHHHhcCCC
Q 009648          159 PAL-GNASVVICCIGASEK---------EVFD--ITGPYRIDFQATKNLVDAATIAKVN  205 (530)
Q Consensus       159 ~a~-~~vD~VI~~Ag~~~~---------~~~~--~~~~~~vNv~gt~~Ll~aa~~~gv~  205 (530)
                      +++ .++|+|+.+.....+         ....  .+..+..|..-...|+++++++|+.
T Consensus        57 ~ll~~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          57 DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             HhcccccceecccccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            223 368998877542211         0000  1233556788889999999988763

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.82  E-value=0.094  Score=47.56  Aligned_cols=35  Identities=26%  Similarity=0.160  Sum_probs=31.9

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .+||+|.| .|..|..++..|.++|++|+++.|+..
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            46899999 899999999999999999999998653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.73  E-value=0.09  Score=50.35  Aligned_cols=35  Identities=20%  Similarity=0.255  Sum_probs=32.2

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      +|+|+|.| +|.-|...+..|.++|++|.++.++..
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            57899999 899999999999999999999998764

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=91.56  E-value=0.3  Score=42.50  Aligned_cols=101  Identities=18%  Similarity=0.196  Sum_probs=59.6

Q ss_pred             CCEEEEECCCcHHHHH-HHHHHHhCC--CeEEE-EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           80 DNLAFVAGATGKVGSR-TVRELLKLG--FRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~-Lv~~Ll~~G--~~V~~-~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.+|.|.| +|.+|+. .+..|.+.+  ++|++ ++|+.++.+.+.+.+                 +...+.       .
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~-----------------~~~~~~-------~   57 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAVF-------D   57 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEEE-------S
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc-----------------ccccee-------e
Confidence            45899999 7999986 467776643  57775 567777666554321                 111111       2


Q ss_pred             hHHHHh--CCCcEEEEcccCCCC---------ccCC--CCcchHhHHHHHHHHHHHHHhcCCC
Q 009648          156 QIEPAL--GNASVVICCIGASEK---------EVFD--ITGPYRIDFQATKNLVDAATIAKVN  205 (530)
Q Consensus       156 sl~~a~--~~vD~VI~~Ag~~~~---------~~~~--~~~~~~vNv~gt~~Ll~aa~~~gv~  205 (530)
                      ++++++  .++|+|+.+.....+         ....  .+..+..|+.-...|++++++.++.
T Consensus        58 ~~~ell~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          58 SYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             CHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             eeeccccccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            355555  368999887542110         0000  1233456677788888888888763

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.55  E-value=0.086  Score=43.68  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=31.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .++++|.| .|+||..++..|.+.|.+|+++.|..
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            57899999 89999999999999999999998865

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.45  E-value=0.13  Score=44.40  Aligned_cols=76  Identities=17%  Similarity=0.057  Sum_probs=46.3

Q ss_pred             CEEEEECCCcHHHHHHHH-HHHh--C---CCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH
Q 009648           81 NLAFVAGATGKVGSRTVR-ELLK--L---GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR  154 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~-~Ll~--~---G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~  154 (530)
                      |||.|.||. .+|..++- .|++  .   +.++.+++.++++.....+..... .           .....+...     
T Consensus         1 mKIaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~-~-----------~~~~~~~~t-----   62 (162)
T d1up7a1           1 MRIAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRL-V-----------KDRFKVLIS-----   62 (162)
T ss_dssp             CEEEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHH-H-----------TTSSEEEEC-----
T ss_pred             CEEEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhh-h-----------ccCceEEEe-----
Confidence            579999974 35655443 2322  1   469999999998876544332222 0           012222221     


Q ss_pred             hhHHHHhCCCcEEEEcccCC
Q 009648          155 VQIEPALGNASVVICCIGAS  174 (530)
Q Consensus       155 ~sl~~a~~~vD~VI~~Ag~~  174 (530)
                      ....++++++|+||..||..
T Consensus        63 ~~~~~~l~~aDvVVita~~~   82 (162)
T d1up7a1          63 DTFEGAVVDAKYVIFQFRPG   82 (162)
T ss_dssp             SSHHHHHTTCSEEEECCCTT
T ss_pred             cCcccccCCCCEEEEecccC
Confidence            12467889999999999864

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.23  E-value=0.21  Score=42.26  Aligned_cols=36  Identities=11%  Similarity=0.003  Sum_probs=30.3

Q ss_pred             CCEEEEE-CCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVT-GAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ++.|+|. .+.||||..++..|.++|++|+++.|...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4566665 35799999999999999999999999764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=91.10  E-value=0.76  Score=43.86  Aligned_cols=144  Identities=10%  Similarity=0.003  Sum_probs=77.9

Q ss_pred             CCCEEE-EECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCH-h
Q 009648           79 DDNLAF-VAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V  155 (530)
Q Consensus        79 ~~k~VL-VTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~  155 (530)
                      .+++|| ++.++|.+|.+    +++.|. +|+.++.+...+....+.++.-++          ...+++++.+|+.+. .
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l----------~~~~~~~i~~d~~~~l~  209 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHL----------DMANHQLVVMDVFDYFK  209 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTC----------CCTTEEEEESCHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcc----------cCcceEEEEccHHHHHH
Confidence            467787 67778877644    334675 799999999887776655443211          235799999998542 1


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc-C-CCEEEEEcCCCccCCCCccccccchhHHHH
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-K-VNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~-g-v~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~  233 (530)
                      .+.+.-+.+|+||...-.......+....    ..+...|++.+.+. . .+.+|+ ||.....            ....
T Consensus       210 ~~~~~~~~fD~Ii~DPP~f~~~~~~~~~~----~~~~~~L~~~a~~ll~pgG~l~~-~scs~~~------------~~~~  272 (317)
T d2b78a2         210 YARRHHLTYDIIIIDPPSFARNKKEVFSV----SKDYHKLIRQGLEILSENGLIIA-STNAANM------------TVSQ  272 (317)
T ss_dssp             HHHHTTCCEEEEEECCCCC-----CCCCH----HHHHHHHHHHHHHTEEEEEEEEE-EECCTTS------------CHHH
T ss_pred             HHHhhcCCCCEEEEcChhhccchhHHHHH----HHHHHHHHHHHHHHcCCCCEEEE-EeCCccC------------CHHH
Confidence            12222246999999854332222221111    33455677766653 1 124444 4432211            0223


Q ss_pred             HHHHHHHHHHHCCCCEEEEE
Q 009648          234 WKRKAEEALIASGLPYTIVR  253 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIvR  253 (530)
                      .+..+++.+...+..+..++
T Consensus       273 f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         273 FKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             HHHHHHHHHTTCCCEEEEEE
T ss_pred             HHHHHHHHHHHcCCeEEEec
Confidence            34444555555666666554

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.08  E-value=0.02  Score=48.89  Aligned_cols=39  Identities=26%  Similarity=0.110  Sum_probs=28.2

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHH
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ  122 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~  122 (530)
                      |-+.| +|.+|+++++.|.+.++.+.+..|+.++.+.+.+
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~   40 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAE   40 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHH
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh
Confidence            34566 9999999999886544445688999998888765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=90.98  E-value=0.1  Score=42.22  Aligned_cols=35  Identities=17%  Similarity=0.102  Sum_probs=29.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHh---CCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~---~G~~V~~~~R~~~  115 (530)
                      .++|+|.| .|++|-.++..|.+   .|.+|+++.|.+.
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence            47899999 89999999987654   4899999999653

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.89  E-value=0.084  Score=47.75  Aligned_cols=33  Identities=21%  Similarity=0.069  Sum_probs=30.1

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      |+|+|.| +|.-|...+.+|.++|++|+++-++.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            5799999 59999999999999999999998764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.84  E-value=0.11  Score=44.89  Aligned_cols=90  Identities=10%  Similarity=-0.007  Sum_probs=54.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+||..|+.-  |+ .+..|+++|++|++++.++..++...+..+..................+.++.+|+.+... 
T Consensus        19 ~~~~rvLd~GCG~--G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-   94 (201)
T d1pjza_          19 VPGARVLVPLCGK--SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-   94 (201)
T ss_dssp             CTTCEEEETTTCC--SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH-
T ss_pred             CCCCEEEEecCcC--CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc-
Confidence            3467999999543  55 4568889999999999999877776554432110000000000112456788888877432 


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                       .....+|+|+....
T Consensus        95 -~~~~~~D~i~~~~~  108 (201)
T d1pjza_          95 -RDIGHCAAFYDRAA  108 (201)
T ss_dssp             -HHHHSEEEEEEESC
T ss_pred             -ccccceeEEEEEee
Confidence             22345788877543

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=0.088  Score=40.18  Aligned_cols=35  Identities=20%  Similarity=0.158  Sum_probs=31.5

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      .|+|.|.| +|.+|+-++.+-.+.|++|++++-+.+
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~   35 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAE   35 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCC
Confidence            36899999 899999999999999999999997664

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.80  E-value=1.1  Score=42.58  Aligned_cols=142  Identities=12%  Similarity=0.017  Sum_probs=80.2

Q ss_pred             CCCEEE-EECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-
Q 009648           79 DDNLAF-VAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-  155 (530)
Q Consensus        79 ~~k~VL-VTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-  155 (530)
                      .+++|| +..++|.++.++    ++.| .+|+.++.++..+....+.++..++           ..+++++.+|+.+.- 
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl-----------~~~~~~~~~d~~~~~~  209 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGV-----------EDRMKFIVGSAFEEME  209 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTC-----------GGGEEEEESCHHHHHH
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCC-----------CccceeeechhhhhhH
Confidence            467888 445566666544    3456 4899999999887776654443311           147899999976522 


Q ss_pred             hHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhc--CCCEEEEEcCCCccCCCCccccccchhHHHH
Q 009648          156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLL  233 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~  233 (530)
                      .+...-+.+|+||...-.......    ....-......|+..|.+.  ..+.+|+.|.....             .+-.
T Consensus       210 ~~~~~~~~fD~Vi~DpP~~~~~~~----~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~~~-------------~~~~  272 (324)
T d2as0a2         210 KLQKKGEKFDIVVLDPPAFVQHEK----DLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV-------------DLQM  272 (324)
T ss_dssp             HHHHTTCCEEEEEECCCCSCSSGG----GHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS-------------CHHH
T ss_pred             HHHhccCCCCchhcCCccccCCHH----HHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCccC-------------CHHH
Confidence            122222469999998654322211    1122234456667666643  22366665533221             0223


Q ss_pred             HHHHHHHHHHHCCCCEEEE
Q 009648          234 WKRKAEEALIASGLPYTIV  252 (530)
Q Consensus       234 sK~~~E~~l~~~gl~~tIv  252 (530)
                      .+..+.+.+.+.|-++.+|
T Consensus       273 f~~~v~~a~~~~gr~~~~~  291 (324)
T d2as0a2         273 FKDMIIAAGAKAGKFLKML  291 (324)
T ss_dssp             HHHHHHHHHHHTTEEEEES
T ss_pred             HHHHHHHHHHHcCCeEEEe
Confidence            3344445556678788876

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.78  E-value=0.11  Score=47.92  Aligned_cols=36  Identities=19%  Similarity=0.214  Sum_probs=32.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .+.++|+|+| +|..|...+.+|.++|++|+++.++.
T Consensus        28 ~~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4567999999 89999999999999999999998865

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.59  E-value=0.26  Score=44.68  Aligned_cols=74  Identities=11%  Similarity=-0.020  Sum_probs=52.7

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++||=.|+..  |+ ++..|+++|.+|++++.++..++...+.....             ..+++++.+|+.+.+   
T Consensus        37 ~~~~vLDiGCG~--G~-~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~-------------~~~v~~~~~d~~~~~---   97 (246)
T d1y8ca_          37 VFDDYLDLACGT--GN-LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ-------------GLKPRLACQDISNLN---   97 (246)
T ss_dssp             CTTEEEEETCTT--ST-THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT-------------TCCCEEECCCGGGCC---
T ss_pred             CCCeEEEEeCcC--CH-HHHHHHHhCCccEeeccchhhhhhcccccccc-------------Cccceeeccchhhhc---
Confidence            356899999654  44 55788899999999999987666554443332             146899999987643   


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                       .-+.+|+||++.+
T Consensus        98 -~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 -INRKFDLITCCLD  110 (246)
T ss_dssp             -CSCCEEEEEECTT
T ss_pred             -ccccccccceeee
Confidence             1246899998754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.51  E-value=0.12  Score=43.64  Aligned_cols=34  Identities=15%  Similarity=0.135  Sum_probs=30.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~  114 (530)
                      +|||+|.| .|++|..++.+|.+.|  .+|+++.+++
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68999999 8999999999999988  4888888765

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.22  E-value=0.14  Score=45.79  Aligned_cols=75  Identities=11%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh--C
Q 009648           85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL--G  162 (530)
Q Consensus        85 VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~--~  162 (530)
                      +|-|+|+.-.++++.+ . +.+|++++|++..+....+.++.+             ..++.++.+++.+...+..-+  .
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-------------~~r~~~~~~~f~~~~~~~~~~~~~   94 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-------------SDRVSLFKVSYREADFLLKTLGIE   94 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-------------TTTEEEEECCGGGHHHHHHHTTCS
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-------------cccccchhHHHhhHHHHHHHcCCC
Confidence            5667777767776665 2 478999999998777665544433             368999999998876665543  6


Q ss_pred             CCcEEEEcccCC
Q 009648          163 NASVVICCIGAS  174 (530)
Q Consensus       163 ~vD~VI~~Ag~~  174 (530)
                      .+|.|+--.|..
T Consensus        95 ~vdgIl~DlGvS  106 (192)
T d1m6ya2          95 KVDGILMDLGVS  106 (192)
T ss_dssp             CEEEEEEECSCC
T ss_pred             Ccceeeeccchh
Confidence            799998888864

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.16  E-value=0.54  Score=42.32  Aligned_cols=98  Identities=15%  Similarity=0.142  Sum_probs=63.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec-C----
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-L----  151 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-l----  151 (530)
                      ..+|.|.| -|+-|.+++..|.+.|.   +.+++.-+.+.+..       .             .....+..+. +    
T Consensus        15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-------~-------------~~~~ki~ig~~~t~g~   73 (209)
T d2vapa1          15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIR-------T-------------KADKKILIGKKLTRGL   73 (209)
T ss_dssp             CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHT-------S-------------CCSEEEECCTTTTTTB
T ss_pred             CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhc-------C-------------Ccchhccccccccccc
Confidence            35799999 78899999999999873   44455544332221       0             0112222221 1    


Q ss_pred             --------------CCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEE
Q 009648          152 --------------EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI  208 (530)
Q Consensus       152 --------------~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V  208 (530)
                                    .+.+.+.+.++++|+||-+||.....          -..++--+++.|++.++-.+-
T Consensus        74 Gag~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGT----------Gsgaapvia~~ake~g~lvv~  134 (209)
T d2vapa1          74 GAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGT----------GTGSAPVVAEISKKIGALTVA  134 (209)
T ss_dssp             CCTTCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCEEEE
T ss_pred             ccccchHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCc----------cccHHHHHHHHHHHcCCcEEE
Confidence                          13457888889999999999976532          345667788999998864333

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=89.98  E-value=0.3  Score=44.09  Aligned_cols=105  Identities=14%  Similarity=0.121  Sum_probs=62.1

Q ss_pred             CCCEEEEECCCcHHHH-HHHHHHHhC-CCeEEE-EECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           79 DDNLAFVAGATGKVGS-RTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~-~Lv~~Ll~~-G~~V~~-~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      +.-+|.|.| +|.+|+ +++..|... +++|++ ++|+.++.+.+.+.   ++++.          ..+.    ...|  
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~---~~i~~----------~~~~----~~~d--   91 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE---YGVDP----------RKIY----DYSN--   91 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH---TTCCG----------GGEE----CSSS--
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh---hcccc----------cccc----ccCc--
Confidence            345899999 689996 566666654 678885 56777777665432   11110          1111    1223  


Q ss_pred             hHHHHh--CCCcEEEEcccCCCC----------cc-CCCCcchHhHHHHHHHHHHHHHhcCC
Q 009648          156 QIEPAL--GNASVVICCIGASEK----------EV-FDITGPYRIDFQATKNLVDAATIAKV  204 (530)
Q Consensus       156 sl~~a~--~~vD~VI~~Ag~~~~----------~~-~~~~~~~~vNv~gt~~Ll~aa~~~gv  204 (530)
                       +++++  .++|+|+.+.....+          .. .-.+..+..|+.-...|+++++++++
T Consensus        92 -~~ell~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~  152 (221)
T d1h6da1          92 -FDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK  152 (221)
T ss_dssp             -GGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred             -hhhhcccccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence             34445  358999887653211          00 00133355678888899999998876

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.90  E-value=0.13  Score=44.87  Aligned_cols=31  Identities=23%  Similarity=0.034  Sum_probs=29.5

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      |+|.| +|..|...+..|+++|++|.++.|+.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            89999 99999999999999999999999975

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.88  E-value=0.76  Score=43.80  Aligned_cols=79  Identities=13%  Similarity=-0.015  Sum_probs=51.7

Q ss_pred             CCCEEE-EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-h
Q 009648           79 DDNLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-Q  156 (530)
Q Consensus        79 ~~k~VL-VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-s  156 (530)
                      ++++|| ++.+||.++.++    ++.|.+|+.++.+...++...+.++.   .|       ....+++++.+|+.+.- .
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~l---n~-------~~~~~~~~i~~D~~~~l~~  197 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVL---AG-------LEQAPIRWICEDAMKFIQR  197 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHH---HT-------CTTSCEEEECSCHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhh---hc-------ccCCcEEEEeCCHHHhHHH
Confidence            466888 777788776654    45789999999998877766543332   22       11247999999985521 1


Q ss_pred             HHHHhCCCcEEEEcc
Q 009648          157 IEPALGNASVVICCI  171 (530)
Q Consensus       157 l~~a~~~vD~VI~~A  171 (530)
                      ...--+.+|+||..-
T Consensus       198 ~~~~~~~fD~IilDP  212 (309)
T d2igta1         198 EERRGSTYDIILTDP  212 (309)
T ss_dssp             HHHHTCCBSEEEECC
T ss_pred             HhhcCCCCCEEEECC
Confidence            122225689999874

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.80  E-value=0.26  Score=41.28  Aligned_cols=106  Identities=18%  Similarity=0.086  Sum_probs=66.5

Q ss_pred             CCEEEEECCC---cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           80 DNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        80 ~k~VLVTGAt---G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++|.|.||+   +..|..+++.|.+.||+++.+.-+... ..                     ..++..+       .+
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~---------------------i~g~~~~-------~~   63 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EE---------------------LFGEEAV-------AS   63 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SE---------------------ETTEECB-------SS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-ce---------------------eeceecc-------cc
Confidence            5689999998   679999999999999999876543210 00                     0111111       12


Q ss_pred             HHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHH
Q 009648          157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR  236 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~  236 (530)
                      +.++-..+|.|+-+..                -..+..+++.|.+.|++.++ +.+...                   ..
T Consensus        64 l~~i~~~iD~v~v~~p----------------~~~v~~~v~~~~~~g~k~i~-~q~G~~-------------------~~  107 (136)
T d1iuka_          64 LLDLKEPVDILDVFRP----------------PSALMDHLPEVLALRPGLVW-LQSGIR-------------------HP  107 (136)
T ss_dssp             GGGCCSCCSEEEECSC----------------HHHHTTTHHHHHHHCCSCEE-ECTTCC-------------------CH
T ss_pred             hhhccCCCceEEEecc----------------HHHHHHHHHHHHhhCCCeEE-EecCcc-------------------CH
Confidence            2222346798888853                23355677778888886654 433211                   11


Q ss_pred             HHHHHHHHCCCCEE
Q 009648          237 KAEEALIASGLPYT  250 (530)
Q Consensus       237 ~~E~~l~~~gl~~t  250 (530)
                      ++.+++++.|++++
T Consensus       108 e~~~~a~~~Gi~vV  121 (136)
T d1iuka_         108 EFEKALKEAGIPVV  121 (136)
T ss_dssp             HHHHHHHHTTCCEE
T ss_pred             HHHHHHHHcCCEEE
Confidence            35677788999877

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=89.64  E-value=0.69  Score=41.08  Aligned_cols=94  Identities=16%  Similarity=0.182  Sum_probs=61.8

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe-cC-----
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC-DL-----  151 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~-Dl-----  151 (530)
                      +||.|.| -|+-|..++..|.+.|   .+.+++.-+.+.+..       .             .....+..+ ++     
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-------~-------------~a~~ki~iG~~~t~G~G   59 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEA-------S-------------NADVKIQIGENITRGLG   59 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHT-------C-------------CCSEEEECCTTTTTTSC
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhc-------C-------------CcceEEecccccCCCcc
Confidence            3688999 7889999999999876   344555544432221       0             011222222 11     


Q ss_pred             -------------CCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC
Q 009648          152 -------------EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (530)
Q Consensus       152 -------------~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~  205 (530)
                                   .+.+.+.+.++++|.||-+||.....          -.-++--+++.|++.++-
T Consensus        60 ~g~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtgaapviA~~ake~g~l  116 (194)
T d1w5fa1          60 AGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGT----------GTGASPVIAKIAKEMGIL  116 (194)
T ss_dssp             CTTCHHHHHHHHHHTHHHHHHHTTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCE
T ss_pred             cccCchhhHhHHHHHHHHHHHHhcCCCeEEEEEecCCCc----------ccchHHHHHHHHHHcCCc
Confidence                         13456888889999999999976532          355677889999998863

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.10  E-value=0.23  Score=44.85  Aligned_cols=37  Identities=24%  Similarity=0.478  Sum_probs=33.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ...++|+|.| +|..|...+..|.++|++|+++.++..
T Consensus        47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence            5678999999 899999999999999999999998653

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.01  E-value=0.51  Score=42.23  Aligned_cols=80  Identities=18%  Similarity=0.146  Sum_probs=58.6

Q ss_pred             CCCCCEEEEECCC-cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           77 SKDDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        77 ~~~~k~VLVTGAt-G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      -..+++||=.|+. |..-.+|++. +..| +|++++-++..++.+.+..+..              .++.++.+|..+..
T Consensus        54 lkpg~~VLDlGcG~G~~~~~la~~-v~~g-~V~gvDis~~~i~~a~~~a~~~--------------~ni~~i~~d~~~~~  117 (209)
T d1nt2a_          54 LRGDERVLYLGAASGTTVSHLADI-VDEG-IIYAVEYSAKPFEKLLELVRER--------------NNIIPLLFDASKPW  117 (209)
T ss_dssp             CCSSCEEEEETCTTSHHHHHHHHH-TTTS-EEEEECCCHHHHHHHHHHHHHC--------------SSEEEECSCTTCGG
T ss_pred             CCCCCEEEEeCCcCCHHHHHHHHh-ccCC-eEEEEeCCHHHHHHHHHHhhcc--------------CCceEEEeeccCcc
Confidence            3557799988854 4444555443 3445 9999999998888776654433              68999999999988


Q ss_pred             hHHHHhCCCcEEEEccc
Q 009648          156 QIEPALGNASVVICCIG  172 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag  172 (530)
                      .....+..+|+|+|...
T Consensus       118 ~~~~~~~~vd~v~~~~~  134 (209)
T d1nt2a_         118 KYSGIVEKVDLIYQDIA  134 (209)
T ss_dssp             GTTTTCCCEEEEEECCC
T ss_pred             ccccccceEEEEEeccc
Confidence            77777778898888644

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.89  E-value=0.57  Score=40.89  Aligned_cols=75  Identities=19%  Similarity=0.187  Sum_probs=52.5

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ...+||=+|+ | .|+.. ..|+++|++|++++-++..++...+...+.         +   ..++++..+|+.+..-  
T Consensus        30 ~~grvLDiGc-G-~G~~~-~~la~~g~~v~gvD~s~~~l~~a~~~~~~~---------~---~~~~~~~~~d~~~~~~--   92 (198)
T d2i6ga1          30 APGRTLDLGC-G-NGRNS-LYLAANGYDVTAWDKNPASMANLERIKAAE---------G---LDNLQTDLVDLNTLTF--   92 (198)
T ss_dssp             CSCEEEEETC-T-TSHHH-HHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T---CTTEEEEECCTTTCCC--
T ss_pred             CCCcEEEECC-C-CCHHH-HHHHHHhhhhccccCcHHHHHHHHHHhhhc---------c---ccchhhhheecccccc--
Confidence            3458999985 4 66644 688899999999999988777665544432         1   2468888888876431  


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                        -..+|+|+.+.-
T Consensus        93 --~~~fD~I~~~~~  104 (198)
T d2i6ga1          93 --DGEYDFILSTVV  104 (198)
T ss_dssp             --CCCEEEEEEESC
T ss_pred             --cccccEEEEeee
Confidence              145899997653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.87  E-value=0.24  Score=44.99  Aligned_cols=36  Identities=22%  Similarity=0.305  Sum_probs=31.6

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      .+..+|+|+| +|.-|...+..|.++|++|+++-++.
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3456799999 89999999999999999999987654

>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Periplasmic binding protein-like I
superfamily: Periplasmic binding protein-like I
family: L-arabinose binding protein-like
domain: Lac-repressor (lacR) core (C-terminal domain)
species: Escherichia coli [TaxId: 562]

Probab=88.74  E-value=2.1  Score=38.76  Aligned_cols=139  Identities=12%  Similarity=0.069  Sum_probs=73.6

Q ss_pred             cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHHHh--CCCcEE
Q 009648           90 GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVV  167 (530)
Q Consensus        90 G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~a~--~~vD~V  167 (530)
                      ..|-..+-+++.++|++|.+..-+....+...+.++.+.-         ....++ ++..+..+.+.+...+  .++-+|
T Consensus        16 ~~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~---------~~vdgi-Il~~~~~~~~~~~~~~~~~~iPvV   85 (271)
T d1jyea_          16 SQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLA---------QRVSGL-IINYPLDDQDAIAVEAACTNVPAL   85 (271)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHT---------TTCSCE-EEESCCCHHHHHHHHHHTTTSCEE
T ss_pred             HHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHh---------cCCCEE-EeccccCchhHHHHHHHhcCCCee
Confidence            3466677788888999998876432222222222322210         011334 3334554444443333  355566


Q ss_pred             EEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHH-HHHHHHHHHCC
Q 009648          168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK-RKAEEALIASG  246 (530)
Q Consensus       168 I~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK-~~~E~~l~~~g  246 (530)
                      +....  ...  ......--|..+...+++.+.+.|.++|++++....             ......+ ...++.+.+.+
T Consensus        86 ~~d~~--~~~--~~~~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~~~~-------------~~~~~~R~~g~~~~~~~~~  148 (271)
T d1jyea_          86 FLDVS--DQT--PINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLS-------------SVSARLRLAGWHKYLTRNQ  148 (271)
T ss_dssp             ESSSC--TTS--SSCEEEECHHHHHHHHHHHHHHHTCCSEEEEECCTT-------------SHHHHHHHHHHHHHHHHTT
T ss_pred             eeecc--ccc--cCCccccchhhccccceeeeeccccccccccccccc-------------cchHHhhhHHHHHHhhhcc
Confidence            55421  111  112223346777888888888889999999874321             0122222 23556677778


Q ss_pred             CCEEEEEcC
Q 009648          247 LPYTIVRPG  255 (530)
Q Consensus       247 l~~tIvRPg  255 (530)
                      +.+...+.+
T Consensus       149 ~~~~~~~~~  157 (271)
T d1jyea_         149 IQPIAEREG  157 (271)
T ss_dssp             CCCSEEEEC
T ss_pred             ccccceecc
Confidence            877666543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.02  E-value=0.62  Score=44.08  Aligned_cols=35  Identities=29%  Similarity=0.320  Sum_probs=31.4

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R  112 (530)
                      ..++++|+|-| -|.+|+++++.|.+.|++|++++-
T Consensus        33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            35688999999 799999999999999999998764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.98  E-value=0.25  Score=46.95  Aligned_cols=38  Identities=21%  Similarity=0.072  Sum_probs=32.5

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCC--CeEEEEECCch
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ  115 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G--~~V~~~~R~~~  115 (530)
                      |...|+|+|.| +|.-|..++..|+++|  ++|+++.|+..
T Consensus         1 m~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           1 LPTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            34568999999 8999999999999876  69999999863

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.67  Score=41.89  Aligned_cols=86  Identities=10%  Similarity=-0.006  Sum_probs=59.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+.+||-.|+..+--.+++..++....+|+.++++++-.+...+.+++.++...       ...++.++.+|..+..  
T Consensus        75 ~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~-------~~~~~~~~~gD~~~~~--  145 (224)
T d1i1na_          75 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-------SSGRVQLVVGDGRMGY--  145 (224)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-------HTSSEEEEESCGGGCC--
T ss_pred             CCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc-------cccceEEEEeeccccc--
Confidence            4567999999776666666677777778999999999877766666654432211       1257888888875311  


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                       .....+|+||.+++.
T Consensus       146 -~~~~~fD~I~~~~~~  160 (224)
T d1i1na_         146 -AEEAPYDAIHVGAAA  160 (224)
T ss_dssp             -GGGCCEEEEEECSBB
T ss_pred             -chhhhhhhhhhhcch
Confidence             113468999998764

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.81  E-value=0.47  Score=45.43  Aligned_cols=73  Identities=12%  Similarity=0.083  Sum_probs=53.4

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhC-C-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKL-G-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~-G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      ...+++.|+| +|..++..++.|... . .+|++.+|+.++.+.+.++++..               .+.... +     
T Consensus       123 ~~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~---------------~~~~~~-~-----  180 (320)
T d1omoa_         123 KNSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR---------------GISASV-Q-----  180 (320)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT---------------TCCEEE-C-----
T ss_pred             CCccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhc---------------CCcccc-c-----
Confidence            3456889997 999999999998863 3 59999999999988887766543               122211 1     


Q ss_pred             hHHHHhCCCcEEEEcccC
Q 009648          156 QIEPALGNASVVICCIGA  173 (530)
Q Consensus       156 sl~~a~~~vD~VI~~Ag~  173 (530)
                       ..+++.++|+||.+...
T Consensus       181 -~~~a~~~aDiV~taT~s  197 (320)
T d1omoa_         181 -PAEEASRCDVLVTTTPS  197 (320)
T ss_dssp             -CHHHHTSSSEEEECCCC
T ss_pred             -hhhhhccccEEEEeccC
Confidence             23557889999988653

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=87.40  E-value=0.84  Score=40.75  Aligned_cols=81  Identities=15%  Similarity=0.094  Sum_probs=52.5

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||-+|+..+--..++..+...+..|+++++++...+...+.++...            ..++.++.+|..+.-  
T Consensus        74 ~~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~------------~~n~~~~~~d~~~~~--  139 (213)
T d1dl5a1          74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG------------IENVIFVCGDGYYGV--  139 (213)
T ss_dssp             CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT------------CCSEEEEESCGGGCC--
T ss_pred             cccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc------------ccccccccCchHHcc--
Confidence            457799977754433333334455556799999999887777666555431            257888888865411  


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                       ..-..+|+||.+++.
T Consensus       140 -~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         140 -PEFSPYDVIFVTVGV  154 (213)
T ss_dssp             -GGGCCEEEEEECSBB
T ss_pred             -ccccchhhhhhhccH
Confidence             122458999988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.33  E-value=0.26  Score=42.10  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=29.0

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      +++|+|.| +|++|..++..|.+.|.+|.++.+..
T Consensus         3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence            56899999 89999999999999998877765544

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=87.21  E-value=0.24  Score=45.25  Aligned_cols=31  Identities=26%  Similarity=0.145  Sum_probs=29.2

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      |+|.| +|.+|..++.+|+++|++|+++.|+.
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            99999 89999999999999999999999864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=86.69  E-value=0.32  Score=39.21  Aligned_cols=35  Identities=11%  Similarity=0.013  Sum_probs=28.1

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHh---CCCeEEEEECCch
Q 009648           80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQ  115 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~---~G~~V~~~~R~~~  115 (530)
                      .++|+|.|| |++|..++..|.+   +|.+|+++.|...
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468999995 9999999976654   4578999998653

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.65  E-value=0.81  Score=41.00  Aligned_cols=74  Identities=14%  Similarity=0.043  Sum_probs=51.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++||=.|+..  |+.+ ..|+++|++|++++-++.-+....+...+.             ..+++++.+|+++...  
T Consensus        41 ~~~~iLDiGcGt--G~~~-~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~-------------~~~i~~~~~d~~~l~~--  102 (251)
T d1wzna1          41 EVRRVLDLACGT--GIPT-LELAERGYEVVGLDLHEEMLRVARRKAKER-------------NLKIEFLQGDVLEIAF--  102 (251)
T ss_dssp             CCCEEEEETCTT--CHHH-HHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCCEEEESCGGGCCC--
T ss_pred             CCCEEEEeCCCC--Cccc-hhhcccceEEEEEeeccccccccccccccc-------------cccchheehhhhhccc--
Confidence            456899998543  5554 668889999999999987666555444332             2478999999876431  


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                        -+.+|+||++.+
T Consensus       103 --~~~fD~I~~~~~  114 (251)
T d1wzna1         103 --KNEFDAVTMFFS  114 (251)
T ss_dssp             --CSCEEEEEECSS
T ss_pred             --ccccchHhhhhh
Confidence              146899998744

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.34  E-value=0.28  Score=45.00  Aligned_cols=31  Identities=23%  Similarity=0.215  Sum_probs=28.9

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      |+|.| +|.+|..++.+|+++|++|+++.|..
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            88998 89999999999999999999999864

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.14  E-value=1.4  Score=41.34  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=28.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECC
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS  113 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~  113 (530)
                      |.+=--.||..|.+|+++|+.+|++|+++.+.
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            56666679999999999999999999999765

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.10  E-value=1.2  Score=39.43  Aligned_cols=31  Identities=19%  Similarity=0.248  Sum_probs=26.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R  112 (530)
                      |+|+|+| ++..|..+++.|+++|++|.++.-
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt   31 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFT   31 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEc
Confidence            6799997 566899999999999999987663

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.84  E-value=1.8  Score=38.29  Aligned_cols=97  Identities=18%  Similarity=0.116  Sum_probs=62.6

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC---eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe---------
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC---------  149 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~---~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~---------  149 (530)
                      +|-|.| -|+-|..++..|.+.|.   +.+++.-+...+..       .             .....+..+         
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~-------~-------------~~~~ki~iG~~~t~G~Ga   61 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLM-------S-------------DADVKLDVGRDSTRGLGA   61 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHH-------C-------------CCSEEEECCTTTC-----
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHHhc-------C-------------CcchhhccccccccCCCc
Confidence            366788 67789999999999873   55555544332221       0             012222222         


Q ss_pred             --c--------CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEE
Q 009648          150 --D--------LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM  209 (530)
Q Consensus       150 --D--------l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~  209 (530)
                        |        ..+.+.+.++++++|.||-+||....+          -.-++--+++.|++.|+-.+-+
T Consensus        62 gg~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtGaaPviA~iake~g~l~v~i  121 (198)
T d1rq2a1          62 GADPEVGRKAAEDAKDEIEELLRGADMVFVTAGEGGGT----------GTGGAPVVASIARKLGALTVGV  121 (198)
T ss_dssp             CCCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHHTCEEEEE
T ss_pred             CcChhhhHhhHHHHHHHHHHHhcCCCEEEEEEecCCCC----------CcchHHHHHHHHHHcCCcEEEE
Confidence              1        124567888899999999999976543          3456777899999988744433

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=85.32  E-value=1.9  Score=37.20  Aligned_cols=106  Identities=16%  Similarity=0.117  Sum_probs=60.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeE------------EEE
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE------------LVE  148 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~------------~v~  148 (530)
                      ++|.|-| =|.|||.+.|.|..++.+|+++.-- ...+.+...++--..      .|. ....+.            +..
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~-~~~~~~ayLl~yDS~------hG~-~~~~v~~~~~~l~i~g~~I~~   71 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSI------YHR-FPGEVAYDDQYLYVDGKAIRA   71 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTT------TCS-CSSCEEECSSEEEETTEEEEE
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC-cchhhhhheeecccc------cCc-cccccccccceeEecceeEEE
Confidence            4788888 8999999999999999999887643 445554433221111      111 111121            111


Q ss_pred             ecCCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcC
Q 009648          149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS  212 (530)
Q Consensus       149 ~Dl~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS  212 (530)
                      ..-.|++.+.=.-.++|+||-|.|.+..                ...++.-.+.|++++|. |.
T Consensus        72 ~~~~~p~~i~W~~~gvdiViEcTG~f~~----------------~~~~~~hl~~gakkVii-SA  118 (168)
T d2g82a1          72 TAVKDPKEIPWAEAGVGVVIESTGVFTD----------------ADKAKAHLEGGAKKVII-TA  118 (168)
T ss_dssp             ECCSSGGGCCTGGGTEEEEEECSSSCCB----------------HHHHTHHHHTTCSEEEE-SS
T ss_pred             EecCChHHCcccccCCceeEeccccccc----------------hHHhhhhhccccceeee-cc
Confidence            2223444433222478999999996532                22223334568888876 53

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.21  E-value=0.89  Score=40.91  Aligned_cols=79  Identities=20%  Similarity=0.199  Sum_probs=52.7

Q ss_pred             CCCCEEEEECCC-cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAt-G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+.+||..|+. |+.- +++..|+  |.+|+.+.++++-.....+.+.+.         |   ..++.++.+|..+.- 
T Consensus        77 ~~g~~VLeIGsGsGY~t-aila~l~--g~~V~~ie~~~~l~~~a~~~l~~~---------g---~~nv~~~~gd~~~g~-  140 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNA-ALISEIV--KTDVYTIERIPELVEFAKRNLERA---------G---VKNVHVILGDGSKGF-  140 (215)
T ss_dssp             CTTCCEEEECCTTSHHH-HHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT---------T---CCSEEEEESCGGGCC-
T ss_pred             CccceEEEecCCCChhH-HHHHHhh--CceeEEEeccHHHHHHHHHHHHHc---------C---CceeEEEECccccCC-
Confidence            456789977755 5554 4445555  567999999987666665555544         1   368999999985421 


Q ss_pred             HHHHhCCCcEEEEcccCC
Q 009648          157 IEPALGNASVVICCIGAS  174 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag~~  174 (530)
                        .....+|.||..++..
T Consensus       141 --~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         141 --PPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             --GGGCCEEEEEECSBBS
T ss_pred             --cccCcceeEEeecccc
Confidence              2235689999887753

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.20  E-value=0.4  Score=41.82  Aligned_cols=33  Identities=24%  Similarity=0.246  Sum_probs=28.7

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEECCc
Q 009648           81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV  114 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~--G~~V~~~~R~~  114 (530)
                      |||+|.| +|++|..++..|.+.  +.+|+++.|+.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            6899999 789999999999887  46899998864

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=85.11  E-value=0.26  Score=45.39  Aligned_cols=33  Identities=21%  Similarity=0.122  Sum_probs=30.4

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      +|+|.| .|..|..++..|.++|++|+++.|.+.
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            599999 679999999999999999999999864

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=85.08  E-value=1.2  Score=41.01  Aligned_cols=78  Identities=12%  Similarity=0.032  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-CcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGA-tG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ..+.+||=+|+ +|.+...|++.   .|.+|++++-++..++...+.....++           ..+++++.+|..+.. 
T Consensus        66 ~~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~i~~a~~~~~~~gl-----------~~~v~~~~~d~~~l~-  130 (282)
T d2o57a1          66 QRQAKGLDLGAGYGGAARFLVRK---FGVSIDCLNIAPVQNKRNEEYNNQAGL-----------ADNITVKYGSFLEIP-  130 (282)
T ss_dssp             CTTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHHTC-----------TTTEEEEECCTTSCS-
T ss_pred             CCCCEEEEeCCCCcHHHhhhhcc---CCcEEEEEeccchhhhhhhcccccccc-----------ccccccccccccccc-
Confidence            34678998885 55544444332   288999999998776666555544422           258999999997742 


Q ss_pred             HHHHhCCCcEEEEccc
Q 009648          157 IEPALGNASVVICCIG  172 (530)
Q Consensus       157 l~~a~~~vD~VI~~Ag  172 (530)
                      +.  -+.+|+|+..-.
T Consensus       131 ~~--~~sfD~V~~~~~  144 (282)
T d2o57a1         131 CE--DNSYDFIWSQDA  144 (282)
T ss_dssp             SC--TTCEEEEEEESC
T ss_pred             cc--ccccchhhccch
Confidence            11  145899987744

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.90  E-value=2.9  Score=33.98  Aligned_cols=90  Identities=16%  Similarity=0.083  Sum_probs=58.3

Q ss_pred             CCCEEEEECCCc----------HHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           79 DDNLAFVAGATG----------KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        79 ~~k~VLVTGAtG----------~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      ..++|||.|+..          +.|.+.+++|.+.|++++++.-|++...-                 ...-..++-|-.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst-----------------d~d~aD~lYfep   65 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST-----------------DYDTSDRLYFEP   65 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT-----------------STTSSSEEECCC
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc-----------------ChhhcCceEEcc
Confidence            457899999743          78999999999999999999988864221                 100112222222


Q ss_pred             ecCCCHhhHHHHh--CCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCC
Q 009648          149 CDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV  204 (530)
Q Consensus       149 ~Dl~d~~sl~~a~--~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv  204 (530)
                         ...+.+.+.+  ++.|.||-..|.                +-..||+..+.+.|+
T Consensus        66 ---lt~e~v~~Ii~~E~p~~ii~~~GG----------------Qtalnla~~L~~~gv  104 (121)
T d1a9xa4          66 ---VTLEDVLEIVRIEKPKGVIVQYGG----------------QTPLKLARALEAAGV  104 (121)
T ss_dssp             ---CSHHHHHHHHHHHCCSEEECSSST----------------HHHHTTHHHHHHTTC
T ss_pred             ---CCHHHHHHHHHHhCCCEEEeehhh----------------hhHHHHHHHHHHcCC
Confidence               2345566655  468888877763                124556666677776

>d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: (Uracil-5-)-methyltransferase
domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=84.87  E-value=1.6  Score=41.60  Aligned_cols=129  Identities=14%  Similarity=0.076  Sum_probs=80.3

Q ss_pred             CCEEE-EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh-hH
Q 009648           80 DNLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-QI  157 (530)
Q Consensus        80 ~k~VL-VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-sl  157 (530)
                      ..+|+ ..+|+|.+|..|    ++.+.+|+++.-+++..+.+.+..+   +.|         ..+++++.+|+.+.- ..
T Consensus       213 ~~~vlDLycG~G~fsl~L----a~~~~~V~gvE~~~~ai~~A~~na~---~n~---------i~n~~~~~~~~~~~~~~~  276 (358)
T d1uwva2         213 EDRVLDLFCGMGNFTLPL----ATQAASVVGVEGVPALVEKGQQNAR---LNG---------LQNVTFYHENLEEDVTKQ  276 (358)
T ss_dssp             TCEEEEESCTTTTTHHHH----HTTSSEEEEEESCHHHHHHHHHHHH---HTT---------CCSEEEEECCTTSCCSSS
T ss_pred             CceEEEecccccccchhc----cccccEEEeccCcHHHHHHHHHhHH---hcc---------cccceeeecchhhhhhhh
Confidence            44565 789999999776    4577899999999887766544322   222         268999999987632 22


Q ss_pred             HHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCccccccchhHHHHHHHH
Q 009648          158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK  237 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~Y~~sK~~  237 (530)
                      ......+|+||-.=--.                |...+++.+.+.+.++|||||--             +.    ...+-
T Consensus       277 ~~~~~~~d~vilDPPR~----------------G~~~~~~~l~~~~~~~ivYVSCn-------------p~----TlaRD  323 (358)
T d1uwva2         277 PWAKNGFDKVLLDPARA----------------GAAGVMQQIIKLEPIRIVYVSCN-------------PA----TLARD  323 (358)
T ss_dssp             GGGTTCCSEEEECCCTT----------------CCHHHHHHHHHHCCSEEEEEESC-------------HH----HHHHH
T ss_pred             hhhhccCceEEeCCCCc----------------cHHHHHHHHHHcCCCEEEEEeCC-------------HH----HHHHH
Confidence            22335679888763211                11234555566678999999942             11    11222


Q ss_pred             HHHHHHHCCCCEEEEEcCccc
Q 009648          238 AEEALIASGLPYTIVRPGGME  258 (530)
Q Consensus       238 ~E~~l~~~gl~~tIvRPg~V~  258 (530)
                      +.. +.+.|.+..-+++-.+|
T Consensus       324 l~~-l~~~gy~l~~i~~~D~F  343 (358)
T d1uwva2         324 SEA-LLKAGYTIARLAMLDMF  343 (358)
T ss_dssp             HHH-HHHTTCEEEEEEEECCS
T ss_pred             HHH-HHHCCCeEeEEEEEecC
Confidence            222 33467777777776665

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=84.84  E-value=0.34  Score=45.00  Aligned_cols=32  Identities=22%  Similarity=0.366  Sum_probs=28.8

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV  114 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~  114 (530)
                      +|+|.| +|.+|..++.+|+++|+ +|+++.|+.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            599999 79999999999999995 799999874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.79  E-value=0.52  Score=42.32  Aligned_cols=89  Identities=8%  Similarity=-0.009  Sum_probs=53.3

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhcccc-----ccCCCCCCCeEEEEecCCC
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELA-----NKGIQPVEMLELVECDLEK  153 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~-----~~g~~~~~~v~~v~~Dl~d  153 (530)
                      .+.+||+.|+..  |+. +..|+++|++|++++-++..++...+............     ........+++++.+|+.+
T Consensus        45 ~~~rvLd~GCG~--G~~-a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGK--AVE-MKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTT--CTH-HHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCC--cHH-HHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            456899999433  644 58889999999999999987766554332110000000     0000123578899999866


Q ss_pred             HhhHHHHhCCCcEEEEccc
Q 009648          154 RVQIEPALGNASVVICCIG  172 (530)
Q Consensus       154 ~~sl~~a~~~vD~VI~~Ag  172 (530)
                      ...  .....+|+|+....
T Consensus       122 l~~--~~~~~fd~i~~~~~  138 (229)
T d2bzga1         122 LPR--TNIGKFDMIWDRGA  138 (229)
T ss_dssp             GGG--SCCCCEEEEEESSS
T ss_pred             ccc--cccCceeEEEEEEE
Confidence            432  11235788887754

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.66  E-value=0.072  Score=47.65  Aligned_cols=26  Identities=23%  Similarity=0.185  Sum_probs=23.5

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeE
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRV  107 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V  107 (530)
                      |+|+|.| +|.+|..++.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            6899999 8999999999999999753

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.56  E-value=1.1  Score=39.05  Aligned_cols=75  Identities=16%  Similarity=-0.012  Sum_probs=51.2

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      .+.+||=.|+..  |. ++..|++.|++|++++-++..+....+.....             ...+.++.+|..+...  
T Consensus        37 ~~~~ILDiGcG~--G~-~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~-------------~~~~~~~~~d~~~l~~--   98 (226)
T d1ve3a1          37 KRGKVLDLACGV--GG-FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR-------------ESNVEFIVGDARKLSF--   98 (226)
T ss_dssp             SCCEEEEETCTT--SH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------------TCCCEEEECCTTSCCS--
T ss_pred             CCCEEEEECCCc--ch-hhhhHhhhhcccccccccccchhhhhhhhccc-------------cccccccccccccccc--
Confidence            345899999655  44 44678889999999999987766655444332             2467888888877321  


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                       --+.+|+||+...
T Consensus        99 -~~~~fD~I~~~~~  111 (226)
T d1ve3a1          99 -EDKTFDYVIFIDS  111 (226)
T ss_dssp             -CTTCEEEEEEESC
T ss_pred             -cCcCceEEEEecc
Confidence             1145899998754

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=84.40  E-value=1.4  Score=39.61  Aligned_cols=86  Identities=15%  Similarity=0.064  Sum_probs=54.3

Q ss_pred             CCCCEEEEECC-CcHHHHHHHHHHHhCC----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCC
Q 009648           78 KDDNLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE  152 (530)
Q Consensus        78 ~~~k~VLVTGA-tG~IG~~Lv~~Ll~~G----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~  152 (530)
                      ..+.+||..|+ ||+.-..|++.+...|    .+|+.+.++++-.+...+.+....+..       ....++.++.+|..
T Consensus        79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~-------~~~~nv~~~~~d~~  151 (223)
T d1r18a_          79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-------LDSGQLLIVEGDGR  151 (223)
T ss_dssp             CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-------HHHTSEEEEESCGG
T ss_pred             CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh-------cCccEEEEEecccc
Confidence            45679999985 6666666666666666    489999998875554443332221100       01258999999975


Q ss_pred             CHhhHHHHhCCCcEEEEcccC
Q 009648          153 KRVQIEPALGNASVVICCIGA  173 (530)
Q Consensus       153 d~~sl~~a~~~vD~VI~~Ag~  173 (530)
                      +..   .....+|.||..++.
T Consensus       152 ~~~---~~~~~fD~Iiv~~a~  169 (223)
T d1r18a_         152 KGY---PPNAPYNAIHVGAAA  169 (223)
T ss_dssp             GCC---GGGCSEEEEEECSCB
T ss_pred             ccc---ccccceeeEEEEeec
Confidence            421   123468999998875

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.33  E-value=0.58  Score=42.03  Aligned_cols=34  Identities=24%  Similarity=0.148  Sum_probs=30.4

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCC-CeEEEEECCch
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ  115 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~  115 (530)
                      ++|+|.| .|..|..++..|.++| ++|+++.|+..
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5799999 8999999999999999 59999998763

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=84.07  E-value=0.43  Score=41.38  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=29.0

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCc
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV  114 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~  114 (530)
                      +|+|.| +|..|...+..|.++|+ +|+++.++.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            599999 89999999999999995 799998865

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.99  E-value=1.7  Score=35.77  Aligned_cols=75  Identities=13%  Similarity=0.165  Sum_probs=51.3

Q ss_pred             CCCEEEEECCC----------cHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEE
Q 009648           79 DDNLAFVAGAT----------GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE  148 (530)
Q Consensus        79 ~~k~VLVTGAt----------G~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~  148 (530)
                      +.++|||.|+.          -+.+.+.+++|.+.|++++++.-|++....                 ......++-|  
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVst-----------------d~d~aD~lYf--   66 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMT-----------------DPEMADATYI--   66 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGG-----------------CGGGSSEEEC--
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhc-----------------Chhhcceeee--
Confidence            45799999984          468999999999999999999988864321                 0000122222  


Q ss_pred             ecCCCHhhHHHHh--CCCcEEEEcccC
Q 009648          149 CDLEKRVQIEPAL--GNASVVICCIGA  173 (530)
Q Consensus       149 ~Dl~d~~sl~~a~--~~vD~VI~~Ag~  173 (530)
                       .--..+.+.+.+  ++.|.|+-..|.
T Consensus        67 -ePlt~e~v~~Ii~~E~pd~il~~~GG   92 (127)
T d1a9xa3          67 -EPIHWEVVRKIIEKERPDAVLPTMGG   92 (127)
T ss_dssp             -SCCCHHHHHHHHHHHCCSEEECSSSH
T ss_pred             -ecCCHHHHHHHHHHhCcCCeEEEeee
Confidence             223456677766  478999887763

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.61  E-value=0.35  Score=45.46  Aligned_cols=34  Identities=24%  Similarity=0.235  Sum_probs=30.6

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCch
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ  115 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~  115 (530)
                      ..|+|.| +|.-|..+++.|+++|++|.++.++..
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            3699999 899999999999999999999998753

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.55  E-value=1  Score=41.80  Aligned_cols=83  Identities=14%  Similarity=0.063  Sum_probs=46.9

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHH
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE  158 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~  158 (530)
                      ..++||=.|+..  |+. +..|+++|++|++++-++.-++...+.....+....        .....+..+|....+.-.
T Consensus        56 ~~~~vLD~GcG~--G~~-~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  124 (292)
T d1xvaa_          56 GCHRVLDVACGT--GVD-SIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPA--------FDKWVIEEANWLTLDKDV  124 (292)
T ss_dssp             TCCEEEESSCTT--SHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHH--------HHTCEEEECCGGGHHHHS
T ss_pred             CCCEEEEecCCC--cHH-HHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccc--------cceeeeeecccccccccc
Confidence            356899888443  443 456678899999999998876655544433321110        012334445543322111


Q ss_pred             HHhCCCcEEEEccc
Q 009648          159 PALGNASVVICCIG  172 (530)
Q Consensus       159 ~a~~~vD~VI~~Ag  172 (530)
                      ..-..+|.||+...
T Consensus       125 ~~~~~fd~v~~~~~  138 (292)
T d1xvaa_         125 PAGDGFDAVICLGN  138 (292)
T ss_dssp             CCTTCEEEEEECSS
T ss_pred             CCCCCceEEEEecC
Confidence            11246899998654

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=83.40  E-value=1.9  Score=37.07  Aligned_cols=86  Identities=5%  Similarity=-0.063  Sum_probs=43.4

Q ss_pred             HhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCCEEEEEcCCCccCCCCcccc-ccchhHHHHHHHHH
Q 009648          160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI-LNLFWGVLLWKRKA  238 (530)
Q Consensus       160 a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~r~V~iSS~~v~~~~~~~~~-~~~~~~Y~~sK~~~  238 (530)
                      .++..|+||-+.|..+...... ...+.-......+++.+++.+. ++|+++............. ......|   ...+
T Consensus        68 ~~~~~D~vvi~~G~ND~~~~~~-~~~~~~~~~l~~li~~~~~~~~-~~vl~~~~~~~~~~~~~~~~~~~~~~~---~~~~  142 (208)
T d2o14a2          68 YIKPGDYFMLQLGINDTNPKHK-ESEAEFKEVMRDMIRQVKAKGA-DVILSTPQGRATDFTSEGIHSSVNRWY---RASI  142 (208)
T ss_dssp             TCCTTCEEEEECCTGGGCGGGC-CCHHHHHHHHHHHHHHHHTTTC-EEEEECCCCCTTCBCTTSCBCCTTSTT---HHHH
T ss_pred             hcCCCCEEEEEcCCCccccccc-ccHHHHHHHHHHHHHHHHhcCC-ceeeccccccccccccccchHHHHHHH---HHHH
Confidence            3455799998888644221111 1122223456677888887776 5677765433221111111 1111122   2345


Q ss_pred             HHHHHHCCCCEE
Q 009648          239 EEALIASGLPYT  250 (530)
Q Consensus       239 E~~l~~~gl~~t  250 (530)
                      ++++++.|+.++
T Consensus       143 ~~~a~~~~v~~v  154 (208)
T d2o14a2         143 LALAEEEKTYLI  154 (208)
T ss_dssp             HHHHHHTTCEEE
T ss_pred             HHhhccCCcEEe
Confidence            667777887765

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.34  E-value=0.54  Score=39.44  Aligned_cols=31  Identities=16%  Similarity=0.219  Sum_probs=26.7

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      ||+|.| .|++|..++..|. ++++|+++.|..
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence            699999 7899999999885 578999998754

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.31  E-value=4.7  Score=35.23  Aligned_cols=44  Identities=23%  Similarity=0.219  Sum_probs=29.4

Q ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-----CeEEEEECCchhHHHHHHHH
Q 009648           80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSV  124 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll~~G-----~~V~~~~R~~~k~~~l~~~~  124 (530)
                      .++|.|-| =|-|||.+.|.+++++     .+|+++.......+.+...+
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLl   50 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQM   50 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHH
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHh
Confidence            46899999 9999999999999874     35555443323344443333

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=83.28  E-value=2.2  Score=39.62  Aligned_cols=77  Identities=8%  Similarity=0.059  Sum_probs=51.5

Q ss_pred             CEEE-EECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhHHH
Q 009648           81 NLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP  159 (530)
Q Consensus        81 k~VL-VTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl~~  159 (530)
                      .+|+ +.||+|.||..+++   ..+.+|++++.++....-..+-.+..++           ..++.+..+|+.+.  +..
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~-----------~~~~~i~~~~~~~~--~~~  175 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGV-----------SDRFFVRKGEFLEP--FKE  175 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTSEEEEESSTTGG--GGG
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCC-----------CceeEEeecccccc--ccc
Confidence            4555 66666667766543   3568999999999876665554443311           25778888898763  234


Q ss_pred             HhCCCcEEEEcccC
Q 009648          160 ALGNASVVICCIGA  173 (530)
Q Consensus       160 a~~~vD~VI~~Ag~  173 (530)
                      ..+.+|+||.|--+
T Consensus       176 ~~~~fDlIVsNPPY  189 (271)
T d1nv8a_         176 KFASIEMILSNPPY  189 (271)
T ss_dssp             GTTTCCEEEECCCC
T ss_pred             ccCcccEEEEcccc
Confidence            45689999999654

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.10  E-value=1.4  Score=38.03  Aligned_cols=76  Identities=18%  Similarity=0.137  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAG-ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTG-AtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .+.+||=.| |+|.++.+    |++.+.+|+++++++..++...+.+++.++           ..+++++.+|..+   .
T Consensus        33 ~g~~VLDiGcGsG~~s~~----lA~~~~~V~avD~~~~~l~~a~~n~~~~gl-----------~~~v~~~~gda~~---~   94 (186)
T d1l3ia_          33 KNDVAVDVGCGTGGVTLE----LAGRVRRVYAIDRNPEAISTTEMNLQRHGL-----------GDNVTLMEGDAPE---A   94 (186)
T ss_dssp             TTCEEEEESCTTSHHHHH----HHTTSSEEEEEESCHHHHHHHHHHHHHTTC-----------CTTEEEEESCHHH---H
T ss_pred             CCCEEEEEECCeEccccc----ccccceEEEEecCCHHHHHHHHHHHHHcCC-----------CcceEEEECchhh---c
Confidence            456788555 45655543    456678999999999888877776665422           2589999998533   2


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      ......+|.||.+.+
T Consensus        95 ~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          95 LCKIPDIDIAVVGGS  109 (186)
T ss_dssp             HTTSCCEEEEEESCC
T ss_pred             ccccCCcCEEEEeCc
Confidence            223467899998743

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.88  E-value=0.73  Score=42.28  Aligned_cols=35  Identities=29%  Similarity=0.310  Sum_probs=31.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R  112 (530)
                      ..++++|+|-| -|.+|+++++.|.+.|.+|++++.
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            36788999998 999999999999999999998774

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.81  E-value=4.8  Score=36.44  Aligned_cols=36  Identities=19%  Similarity=0.274  Sum_probs=30.3

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHh-CCCeEEEEECC
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRS  113 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~-~G~~V~~~~R~  113 (530)
                      ..++++|+|-| -|.+|.++++.|.+ .|.+|+.+.-.
T Consensus        29 ~l~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence            36788999999 69999999999986 48999887643

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=82.67  E-value=8.5  Score=34.33  Aligned_cols=75  Identities=12%  Similarity=0.093  Sum_probs=43.5

Q ss_pred             CCCEEEEEC-CCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           79 DDNLAFVAG-ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        79 ~~k~VLVTG-AtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..++||=+| |+|.+...+++..  -+.++++++. ++......+.+.+.           ....+++++.+|+.+..  
T Consensus        80 ~~~~VLDvGcG~G~~~~~la~~~--p~~~~~~~D~-~~~~~~a~~~~~~~-----------~~~~rv~~~~~D~~~~~--  143 (253)
T d1tw3a2          80 NVRHVLDVGGGKGGFAAAIARRA--PHVSATVLEM-AGTVDTARSYLKDE-----------GLSDRVDVVEGDFFEPL--  143 (253)
T ss_dssp             TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-TTHHHHHHHHHHHT-----------TCTTTEEEEECCTTSCC--
T ss_pred             cCCEEEEeCCCCCHHHHHHHHhc--ceeEEEEccC-HHHHHHHHHHHHHh-----------hcccchhhccccchhhc--
Confidence            346788655 4444444443321  1468888886 44444444444433           12368999999986532  


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                         ..++|+|+....
T Consensus       144 ---~~~~D~v~~~~v  155 (253)
T d1tw3a2         144 ---PRKADAIILSFV  155 (253)
T ss_dssp             ---SSCEEEEEEESC
T ss_pred             ---ccchhheeeccc
Confidence               256898886643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=82.59  E-value=1.4  Score=36.90  Aligned_cols=77  Identities=10%  Similarity=0.109  Sum_probs=52.4

Q ss_pred             CCCCEEE-EECCCcHHHHHHHHHHHhCC-CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHh
Q 009648           78 KDDNLAF-VAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV  155 (530)
Q Consensus        78 ~~~k~VL-VTGAtG~IG~~Lv~~Ll~~G-~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~  155 (530)
                      .++++|| +..|||.+|-.    ++.+| .+|+++..+....+.+.+.++..+           ...+++++++|..+  
T Consensus        13 ~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~-----------~~~~~~ii~~D~~~--   75 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTK-----------AENRFTLLKMEAER--   75 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTT-----------CGGGEEEECSCHHH--
T ss_pred             CCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcc-----------cccchhhhcccccc--
Confidence            4567787 66778888764    34567 499999999887776665554331           12578999998643  


Q ss_pred             hHHHHhCCCcEEEEcc
Q 009648          156 QIEPALGNASVVICCI  171 (530)
Q Consensus       156 sl~~a~~~vD~VI~~A  171 (530)
                      .+...-+.+|+|+...
T Consensus        76 ~l~~~~~~fDiIf~DP   91 (152)
T d2esra1          76 AIDCLTGRFDLVFLDP   91 (152)
T ss_dssp             HHHHBCSCEEEEEECC
T ss_pred             cccccccccceeEech
Confidence            2344446789998763

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=82.44  E-value=0.56  Score=45.07  Aligned_cols=32  Identities=19%  Similarity=0.202  Sum_probs=24.9

Q ss_pred             CEEEEECC------CcHHH---HHHHHHHHhCCCeEEEEEC
Q 009648           81 NLAFVAGA------TGKVG---SRTVRELLKLGFRVRAGVR  112 (530)
Q Consensus        81 k~VLVTGA------tG~IG---~~Lv~~Ll~~G~~V~~~~R  112 (530)
                      |+||+++.      +|++|   ..|+++|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            57777664      46666   5668999999999999874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.10  E-value=2.7  Score=39.18  Aligned_cols=76  Identities=14%  Similarity=0.102  Sum_probs=51.7

Q ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        77 ~~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      ...+.+||=+|+ | .|.-.+....+.|.+|++++-+....+...+...+.+           -..++++..+|..+.+ 
T Consensus        60 l~~G~~VLDiGC-G-~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g-----------~~~~v~~~~~d~~~~~-  125 (285)
T d1kpga_          60 LQPGMTLLDVGC-G-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSE-----------NLRSKRVLLAGWEQFD-  125 (285)
T ss_dssp             CCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCC-----------CCSCEEEEESCGGGCC-
T ss_pred             CCCCCEEEEecC-c-chHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhh-----------hhhhhHHHHhhhhccc-
Confidence            356789999994 3 2333333334469999999999988777766555432           2368888888875532 


Q ss_pred             HHHHhCCCcEEEEcc
Q 009648          157 IEPALGNASVVICCI  171 (530)
Q Consensus       157 l~~a~~~vD~VI~~A  171 (530)
                           +.+|.|+..-
T Consensus       126 -----~~fD~i~si~  135 (285)
T d1kpga_         126 -----EPVDRIVSIG  135 (285)
T ss_dssp             -----CCCSEEEEES
T ss_pred             -----ccccceeeeh
Confidence                 4689988863

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.09  E-value=2.6  Score=35.42  Aligned_cols=32  Identities=25%  Similarity=0.248  Sum_probs=27.8

Q ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEE
Q 009648           79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAG  110 (530)
Q Consensus        79 ~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~  110 (530)
                      ++++|.|++.+|+.|.-++..+.+.|.++--+
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l   33 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL   33 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC
Confidence            46789999999999999999999999777544

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.94  E-value=0.27  Score=42.28  Aligned_cols=31  Identities=26%  Similarity=0.263  Sum_probs=26.2

Q ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEC
Q 009648           81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR  112 (530)
Q Consensus        81 k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R  112 (530)
                      .+|+|.| +|++|-.++..|.+.|++|.++.+
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            3599999 899999999999999977666554

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.71  E-value=1.6  Score=40.99  Aligned_cols=75  Identities=13%  Similarity=0.108  Sum_probs=47.7

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhh
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ  156 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~-~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~s  156 (530)
                      .++++||-.|+..++   ++..++++|. +|++++.++... ...+...+.           ....++.++.+|+.+...
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~-----------~~~~~i~~~~~~~~~l~~   98 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLN-----------KLEDTITLIKGKIEEVHL   98 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHT-----------TCTTTEEEEESCTTTSCC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHh-----------CCCccceEEEeeHHHhcC
Confidence            457899999854322   4455667884 899999887532 222222222           123689999999887431


Q ss_pred             HHHHhCCCcEEEEc
Q 009648          157 IEPALGNASVVICC  170 (530)
Q Consensus       157 l~~a~~~vD~VI~~  170 (530)
                         -.+.+|+||..
T Consensus        99 ---~~~~~D~Ivse  109 (311)
T d2fyta1          99 ---PVEKVDVIISE  109 (311)
T ss_dssp             ---SCSCEEEEEEC
T ss_pred             ---ccccceEEEEe
Confidence               12578999975

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.65  E-value=0.66  Score=42.77  Aligned_cols=31  Identities=23%  Similarity=0.204  Sum_probs=28.9

Q ss_pred             EEEECCCcHHHHHHHHHHHhCCCeEEEEECCc
Q 009648           83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV  114 (530)
Q Consensus        83 VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~  114 (530)
                      |+|+| +|..|...+..|.++|++|+++.++.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            78999 89999999999999999999998765

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.14  E-value=1.4  Score=38.35  Aligned_cols=68  Identities=21%  Similarity=0.265  Sum_probs=52.0

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      .++++|.|+| -|--|++-+.-|...|.+|++..|...+.-...+.                  .++++        -++
T Consensus        14 ik~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~------------------~Gf~v--------~~~   66 (182)
T d1np3a2          14 IQGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEA------------------HGLKV--------ADV   66 (182)
T ss_dssp             HHTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH------------------TTCEE--------ECH
T ss_pred             HCCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhh------------------hcccc--------ccH
Confidence            3468899999 89999999999999999999999987643322110                  23333        347


Q ss_pred             HHHhCCCcEEEEccc
Q 009648          158 EPALGNASVVICCIG  172 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag  172 (530)
                      .++.+..|+|..+.-
T Consensus        67 ~eA~~~aDiim~L~P   81 (182)
T d1np3a2          67 KTAVAAADVVMILTP   81 (182)
T ss_dssp             HHHHHTCSEEEECSC
T ss_pred             HHHhhhcCeeeeecc
Confidence            888999999999964

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=81.10  E-value=2.3  Score=36.61  Aligned_cols=42  Identities=24%  Similarity=0.279  Sum_probs=31.1

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHH
Q 009648           82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV  124 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~  124 (530)
                      ||.|-| =|.|||.+.|.+++++.+|+++.-.....+.+...+
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl   43 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF   43 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH
Confidence            578888 899999999999999998887764333444444333

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.08  E-value=1.6  Score=38.74  Aligned_cols=93  Identities=20%  Similarity=0.201  Sum_probs=61.3

Q ss_pred             EEEEECCCcHHHHHHHHHHHhCC---CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEe---------
Q 009648           82 LAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC---------  149 (530)
Q Consensus        82 ~VLVTGAtG~IG~~Lv~~Ll~~G---~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~---------  149 (530)
                      +|.|.| -|+-|.+++..|.+.|   .+.+++.-+.+.+...                    .....+..+         
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~--------------------~~~~ki~iG~~~~~g~G~   61 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNI--------------------AARTVLQLGPGVTKGLGA   61 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSC--------------------SCSEEEECCHHHHTTBCC
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcC--------------------CccceeccccccccCCCC
Confidence            478888 7889999999999987   3566665554433210                    011111111         


Q ss_pred             --c--------CCCHhhHHHHhCCCcEEEEcccCCCCccCCCCcchHhHHHHHHHHHHHHHhcCCC
Q 009648          150 --D--------LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN  205 (530)
Q Consensus       150 --D--------l~d~~sl~~a~~~vD~VI~~Ag~~~~~~~~~~~~~~vNv~gt~~Ll~aa~~~gv~  205 (530)
                        |        ..+.+.+.++++++|.||-+||.....          -.-++--+++.|++.|+-
T Consensus        62 gg~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGT----------GtgaapviA~~ake~g~l  117 (198)
T d1ofua1          62 GANPEVGRQAALEDRERISEVLEGADMVFITTGMGGGT----------GTGAAPIIAEVAKEMGIL  117 (198)
T ss_dssp             CSCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCE
T ss_pred             CCChHHHHHHHHHHHHHHHHHhCCCCeEEEEecCCCCc----------cccHHHHHHHHHHHcCCC
Confidence              1        114566888899999999999976543          345566789999998863

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=80.69  E-value=1.2  Score=40.22  Aligned_cols=76  Identities=9%  Similarity=-0.069  Sum_probs=48.3

Q ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEecCCCHhhH
Q 009648           78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI  157 (530)
Q Consensus        78 ~~~k~VLVTGAtG~IG~~Lv~~Ll~~G~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~sl  157 (530)
                      ..+++||-.|+..+-   ++..|++.+.+|+.+.+++.-.....+.+.+              ..++.++.+|..+.  +
T Consensus        69 ~~g~~VLdIG~GsGy---~ta~La~l~~~V~aiE~~~~~~~~A~~~~~~--------------~~nv~~~~~d~~~g--~  129 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGY---YTALIAEIVDKVVSVEINEKMYNYASKLLSY--------------YNNIKLILGDGTLG--Y  129 (224)
T ss_dssp             CTTCEEEEECCTTSH---HHHHHHHHSSEEEEEESCHHHHHHHHHHHTT--------------CSSEEEEESCGGGC--C
T ss_pred             cccceEEEecCCCCH---HHHHHHHHhcccccccccHHHHHHHHHHHhc--------------ccccccccCchhhc--c
Confidence            456789988754322   2234455567999999988766554432221              26899999997541  1


Q ss_pred             HHHhCCCcEEEEcccC
Q 009648          158 EPALGNASVVICCIGA  173 (530)
Q Consensus       158 ~~a~~~vD~VI~~Ag~  173 (530)
                      . ..+.+|+||..++.
T Consensus       130 ~-~~~pfD~Iiv~~a~  144 (224)
T d1vbfa_         130 E-EEKPYDRVVVWATA  144 (224)
T ss_dssp             G-GGCCEEEEEESSBB
T ss_pred             h-hhhhHHHHHhhcch
Confidence            1 13458999988764

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=80.64  E-value=6.9  Score=34.16  Aligned_cols=71  Identities=20%  Similarity=0.204  Sum_probs=43.8

Q ss_pred             CEEE-EECCCcHHHHHHHH----HHHhCC-----CeEEEEECCchhHHHHHHHHHHhhhhccccccCCCCCCCeEEEEec
Q 009648           81 NLAF-VAGATGKVGSRTVR----ELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD  150 (530)
Q Consensus        81 k~VL-VTGAtG~IG~~Lv~----~Ll~~G-----~~V~~~~R~~~k~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D  150 (530)
                      ++++ |+||||-+-+.-+-    .|...|     +.|+++.|+.-..+...+.+.+.-.                   ..
T Consensus         5 ~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~-------------------~~   65 (195)
T d1h9aa1           5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIK-------------------DF   65 (195)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHG-------------------GG
T ss_pred             ceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHh-------------------hc
Confidence            3454 78999999886542    333444     6899999988766666655544310                   11


Q ss_pred             CCCHhhHHHHhCCCcEEEEc
Q 009648          151 LEKRVQIEPALGNASVVICC  170 (530)
Q Consensus       151 l~d~~sl~~a~~~vD~VI~~  170 (530)
                      ..+...+...++.+..+.+.
T Consensus        66 ~~~~~~~~~~~~~~~y~~~~   85 (195)
T d1h9aa1          66 TDDQAQAEAFIEHFSYRAHD   85 (195)
T ss_dssp             CSCHHHHHHHHTTEEEEECC
T ss_pred             cchHhhHHHHhhccceeeEe
Confidence            22445566677777665544

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.17  E-value=0.84  Score=37.65  Aligned_cols=34  Identities=24%  Similarity=0.135  Sum_probs=28.6

Q ss_pred             CCEEEEECCCcHHHHHHHHHHH----hCCCeEEEEECCc
Q 009648           80 DNLAFVAGATGKVGSRTVRELL----KLGFRVRAGVRSV  114 (530)
Q Consensus        80 ~k~VLVTGAtG~IG~~Lv~~Ll----~~G~~V~~~~R~~  114 (530)
                      .++|+|.| .|++|..++..|.    ..|.+|+++.+..
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            46899998 6999999998886    3589999998865